BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046112
(502 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 141/295 (47%), Gaps = 16/295 (5%)
Query: 196 SYRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEV 255
S R L A+ FS++N++G G FG VYKG L + T ++ F E E+
Sbjct: 29 SLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEM 88
Query: 256 TRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLN 315
HRNL+++ C + LVY +MANGS+ + +R ++ L+
Sbjct: 89 ISMAVHRNLLRLRGFC-----MTPTERLLVYPYMANGSVASCLR------ERPESQPPLD 137
Query: 316 SLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADE 375
KR IA+ A L YLH C P I H D+K +NILLD+E A V DFG+A+ ++ D
Sbjct: 138 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 197
Query: 376 QTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMF---KDNLNL 432
V GT G+IAPEY + S DV+ +G++LLE+ TG R D D++ L
Sbjct: 198 HV-XXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 256
Query: 433 RNCVKSALPERAEEIRASSGSTQRXXXXXXXXXXXXXGVACSAEQPGERMKINDV 487
+ VK L E+ E Q + C+ P ER K+++V
Sbjct: 257 LDWVKGLLKEKKLEALVDV-DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 310
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 138/295 (46%), Gaps = 16/295 (5%)
Query: 196 SYRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEV 255
S R L A+ F ++N++G G FG VYKG L + ++ F E E+
Sbjct: 21 SLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEM 80
Query: 256 TRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLN 315
HRNL+++ C + LVY +MANGS+ + +R ++ L+
Sbjct: 81 ISMAVHRNLLRLRGFC-----MTPTERLLVYPYMANGSVASCLR------ERPESQPPLD 129
Query: 316 SLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADE 375
KR IA+ A L YLH C P I H D+K +NILLD+E A V DFG+A+ ++ D
Sbjct: 130 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 189
Query: 376 QTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMF---KDNLNL 432
V G G+IAPEY + S DV+ +G++LLE+ TG R D D++ L
Sbjct: 190 HV-XXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Query: 433 RNCVKSALPERAEEIRASSGSTQRXXXXXXXXXXXXXGVACSAEQPGERMKINDV 487
+ VK L E+ E Q + C+ P ER K+++V
Sbjct: 249 LDWVKGLLKEKKLEALVDV-DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 118/241 (48%), Gaps = 24/241 (9%)
Query: 192 FPYVSYRMLYNATKGFSSE------NLIGAGNFGSVYKGILFESTTAVA--VKVFNVLHH 243
F S+ L N T F N +G G FG VYKG + +T AV + ++
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 244 DASKSFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITE 303
+ + F E +V +H NLV++ G G+D LVY +M NGSL + + +
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRLSCL-- 124
Query: 304 EDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSD 363
L+ R IA A + +LH + H D+K +NILLD+ TA +SD
Sbjct: 125 -----DGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 364 FGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSD 423
FG+AR E + + GTT Y+APE G E++ D+YSFG++LLE+ TGL D
Sbjct: 177 FGLARASEKFAQTVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 424 D 424
+
Sbjct: 236 E 236
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 118/241 (48%), Gaps = 24/241 (9%)
Query: 192 FPYVSYRMLYNATKGFSSE------NLIGAGNFGSVYKGILFESTTAVA--VKVFNVLHH 243
F S+ L N T F N +G G FG VYKG + +T AV + ++
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 65
Query: 244 DASKSFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITE 303
+ + F E +V +H NLV++ G G+D LVY +M NGSL + + +
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRLSCL-- 118
Query: 304 EDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSD 363
L+ R IA A + +LH + H D+K +NILLD+ TA +SD
Sbjct: 119 -----DGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 170
Query: 364 FGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSD 423
FG+AR E + + GTT Y+APE G E++ D+YSFG++LLE+ TGL D
Sbjct: 171 FGLARASEKFAQXVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVD 229
Query: 424 D 424
+
Sbjct: 230 E 230
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 118/241 (48%), Gaps = 24/241 (9%)
Query: 192 FPYVSYRMLYNATKGFSSE------NLIGAGNFGSVYKGILFESTTAVA--VKVFNVLHH 243
F S+ L N T F N +G G FG VYKG + +T AV + ++
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 244 DASKSFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITE 303
+ + F E +V +H NLV++ G G+D LVY +M NGSL + + +
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRLSCL-- 124
Query: 304 EDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSD 363
L+ R IA A + +LH + H D+K +NILLD+ TA +SD
Sbjct: 125 -----DGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 364 FGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSD 423
FG+AR E + + GTT Y+APE G E++ D+YSFG++LLE+ TGL D
Sbjct: 177 FGLARASEKFAQTVMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 424 D 424
+
Sbjct: 236 E 236
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 15/209 (7%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IGAG+FG+V++ S AV + + H + F E + + +RH N+V A +
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
Q + ++V E+++ GSL +H + A L+ +RL++A DVA + Y
Sbjct: 105 ----QPPNL-SIVTEYLSRGSLYRLLH-------KSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
LH + PPI H DLK N+L+D + T V DFG++R A S GT ++APE
Sbjct: 153 LH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPE 209
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ DVYSFG++L E+ T +P
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 115/241 (47%), Gaps = 24/241 (9%)
Query: 192 FPYVSYRMLYNATKGFSSE------NLIGAGNFGSVYKGILFESTTAVA--VKVFNVLHH 243
F S+ L N T F N G G FG VYKG + +T AV + ++
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 62
Query: 244 DASKSFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITE 303
+ + F E +V +H NLV++ G G+D LVY + NGSL + + +
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELL----GFSSDGDDL-CLVYVYXPNGSLLDRLSCL-- 115
Query: 304 EDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSD 363
L+ R IA A + +LH + H D+K +NILLD+ TA +SD
Sbjct: 116 -----DGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 167
Query: 364 FGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSD 423
FG+AR E + + GTT Y APE G E++ D+YSFG++LLE+ TGL D
Sbjct: 168 FGLARASEKFAQXVXXSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVD 226
Query: 424 D 424
+
Sbjct: 227 E 227
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 15/209 (7%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IGAG+FG+V++ S AV + + H + F E + + +RH N+V A +
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
Q + ++V E+++ GSL +H + A L+ +RL++A DVA + Y
Sbjct: 105 ----QPPNL-SIVTEYLSRGSLYRLLH-------KSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
LH + PPI H +LK N+L+D + T V DFG++R + ++S GT ++APE
Sbjct: 153 LH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA--GTPEWMAPE 209
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ DVYSFG++L E+ T +P
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 114/233 (48%), Gaps = 29/233 (12%)
Query: 193 PYVSYRM----LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKS 248
P+ SYR+ L AT F + LIG G FG VYKG+L + VA+K +
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK-VALKRRTPESSQGIEE 81
Query: 249 FAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRH 308
F E E RH +LV + C + N+ L+Y++M NG+L KRH
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCD----ERNEM-ILIYKYMENGNL-----------KRH 125
Query: 309 KAPGNLNSL-----KRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSD 363
+L ++ +RL I I A L YLH I H D+K NILLD+ ++D
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITD 182
Query: 364 FGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMF 416
FGI++ D+ V+GT GYI PEY + ++ DVYSFG++L E+
Sbjct: 183 FGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 113/233 (48%), Gaps = 29/233 (12%)
Query: 193 PYVSYRM----LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKS 248
P+ SYR+ L AT F + LIG G FG VYKG+L + VA+K +
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK-VALKRRTPESSQGIEE 81
Query: 249 FAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRH 308
F E E RH +LV + C + N+ L+Y++M NG+L KRH
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCD----ERNEM-ILIYKYMENGNL-----------KRH 125
Query: 309 KAPGNLNSL-----KRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSD 363
+L ++ +RL I I A L YLH I H D+K NILLD+ ++D
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITD 182
Query: 364 FGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMF 416
FGI++ + V+GT GYI PEY + ++ DVYSFG++L E+
Sbjct: 183 FGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 28/223 (12%)
Query: 208 SSENLIGAGNFGSVYKGILFEST----TAVAVKVFNVLHHDASK-SFAVECEVTRNIRHR 262
+ + +IGAG FG VYKG+L S+ VA+K + + + F E + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 263 NLVKVFTACSGVDFQGNDFKAL--VYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
N++++ S +K + + E+M NG+L++++ E+D G + L+ +
Sbjct: 107 NIIRLEGVIS-------KYKPMMIITEYMENGALDKFLR---EKD------GEFSVLQLV 150
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
+ +A +KYL H DL NIL++ + VSDFG++R LE E T +
Sbjct: 151 GMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
Query: 381 -GVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
G + + APE + +S DV+SFGI++ E+ T G RP
Sbjct: 208 SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 16 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 74 ------EEPIXIVTEYMSKGSLLDFLK--GETGKYLRLP------QLVDMAAQIASGMAY 119
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 120 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPE 175
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 176 AALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 25/243 (10%)
Query: 187 TPSISFPYVSYRMLYNATKGFSSENLIGAGNFGSVYKGILF-ESTTA---VAVKVFN-VL 241
TPS + P + + T+ ++G+G FG+VYKGI E T VA+K+ N
Sbjct: 21 TPSGTAPNQAQLRILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 79
Query: 242 HHDASKSFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPI 301
A+ F E + ++ H +LV++ C Q LV + M +G L E++H
Sbjct: 80 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVH-- 131
Query: 302 TEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
HK N+ S LN + +A + YL + + H DL N+L+ +
Sbjct: 132 -----EHK--DNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKI 181
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLR 420
+DFG+AR LE +++ + G + ++A E + + DV+S+G+ + E+ T G +
Sbjct: 182 TDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGK 241
Query: 421 PSD 423
P D
Sbjct: 242 PYD 244
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + IRH LV+++ S
Sbjct: 26 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 84 ------EEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLP------QLVDMAAQIASGMAY 129
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 185
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 275 LGQGCFGEVWMGT-WNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 333 ------EEPIYIVTEYMSKGSLLDFLK--GETGKYLRLP------QLVDMAAQIASGMAY 378
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 379 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 434
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 435 AALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 26 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 84 ------EEPIYIVIEYMSKGSLLDFLK--GEMGKYLRLP------QLVDMAAQIASGMAY 129
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPE 185
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 32/217 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
IG+G+FG+VYKG + VAVK+ NV + +F E V R RH N++
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 73
Query: 271 CSGVDFQGNDFK---ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
F G K A+V ++ SL +H I + +K ++IA A
Sbjct: 74 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTA 119
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
+ YLH I H DLK +NI L +++T + DFG+A + + G+
Sbjct: 120 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 388 YIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
++APE + + Y DVY+FGI+L E+ TG P
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 32/217 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
IG+G+FG+VYKG + VAVK+ NV + +F E V R RH N++
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 96
Query: 271 CSGVDFQGNDFK---ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
F G K A+V ++ SL +H I + +K ++IA A
Sbjct: 97 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTA 142
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
+ YLH I H DLK +NI L +++T + DFG+A + + G+
Sbjct: 143 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 388 YIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
++APE + + Y DVY+FGI+L E+ TG P
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 19 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 77 ------EEPIYIVTEYMSKGSLLDFLK--GETGKYLRLP------QLVDMAAQIASGMAY 122
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 123 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 178
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 192 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 250 ------EEPIYIVTEYMSKGSLLDFLK--GETGKYLRLP------QLVDMAAQIASGMAY 295
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 351
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 32/217 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
IG+G+FG+VYKG + VAVK+ NV + +F E V R RH N++
Sbjct: 43 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 95
Query: 271 CSGVDFQGNDFK---ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
F G K A+V ++ SL +H I + +K ++IA A
Sbjct: 96 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTA 141
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
+ YLH I H DLK +NI L +++T + DFG+A + + G+
Sbjct: 142 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 198
Query: 388 YIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
++APE + + Y DVY+FGI+L E+ TG P
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 32/217 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
IG+G+FG+VYKG + VAVK+ NV + +F E V R RH N++
Sbjct: 18 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 70
Query: 271 CSGVDFQGNDFK---ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
F G K A+V ++ SL +H I + +K ++IA A
Sbjct: 71 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTA 116
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
+ YLH I H DLK +NI L +++T + DFG+A + + G+
Sbjct: 117 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 173
Query: 388 YIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
++APE + + Y DVY+FGI+L E+ TG P
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 26 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 84 ------EEPIYIVIEYMSKGSLLDFLK--GEMGKYLRLP------QLVDMAAQIASGMAY 129
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 185
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 192 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 250 ------EEPIYIVTEYMSKGSLLDFLK--GETGKYLRLP------QLVDMAAQIASGMAY 295
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 351
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
IG+G+FG+VYKG + VAVK+ NV + +F E V R RH N++
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ A+V ++ SL +H I + +K ++IA A +
Sbjct: 73 STAPQL------AIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTAQGM 117
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
YLH I H DLK +NI L +++T + DFG+A + + G+ ++A
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 391 PEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
PE + + Y DVY+FGI+L E+ TG P
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 32/217 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
IG+G+FG+VYKG + VAVK+ NV + +F E V R RH N++
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 73
Query: 271 CSGVDFQGNDFK---ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
F G K A+V ++ SL +H I + +K ++IA A
Sbjct: 74 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTA 119
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
+ YLH I H DLK +NI L +++T + DFG+A + + G+
Sbjct: 120 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 388 YIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
++APE + + Y DVY+FGI+L E+ TG P
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 32/217 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
IG+G+FG+VYKG + VAVK+ NV + +F E V R RH N++
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 68
Query: 271 CSGVDFQGNDFK---ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
F G K A+V ++ SL +H I + +K ++IA A
Sbjct: 69 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTA 114
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
+ YLH I H DLK +NI L +++T + DFG+A + + G+
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 388 YIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
++APE + + Y DVY+FGI+L E+ TG P
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 105/223 (47%), Gaps = 44/223 (19%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
IG+G+FG+VYKG + VAVK+ NV + +F E V R RH N++
Sbjct: 36 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 88
Query: 271 CSGVDFQGNDFK---ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
F G K A+V ++ SL +H I + +K ++IA A
Sbjct: 89 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTA 134
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG------ 381
+ YLH I H DLK +NI L +++T + DFG+ A E++R G
Sbjct: 135 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGL------ATEKSRWSGSHQFEQ 185
Query: 382 VEGTTGYIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
+ G+ ++APE + + Y DVY+FGI+L E+ TG P
Sbjct: 186 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 15 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 73 ------EEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLP------QLVDMAAQIASGMAY 118
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 119 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 174
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 105/223 (47%), Gaps = 44/223 (19%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
IG+G+FG+VYKG + VAVK+ NV + +F E V R RH N++
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 96
Query: 271 CSGVDFQGNDFK---ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
F G K A+V ++ SL +H I + +K ++IA A
Sbjct: 97 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTA 142
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG------ 381
+ YLH I H DLK +NI L +++T + DFG+ A E++R G
Sbjct: 143 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGL------ATEKSRWSGSHQFEQ 193
Query: 382 VEGTTGYIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
+ G+ ++APE + + Y DVY+FGI+L E+ TG P
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 26 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 84 ------EEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLP------QLVDMAAQIASGMAY 129
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 185
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 17 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 75 ------EEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLP------QLVDMAAQIASGMAY 120
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 121 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 176
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 105/223 (47%), Gaps = 44/223 (19%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
IG+G+FG+VYKG + VAVK+ NV + +F E V R RH N++
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 68
Query: 271 CSGVDFQGNDFK---ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
F G K A+V ++ SL +H I + +K ++IA A
Sbjct: 69 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTA 114
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG------ 381
+ YLH I H DLK +NI L +++T + DFG+ A E++R G
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGL------ATEKSRWSGSHQFEQ 165
Query: 382 VEGTTGYIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
+ G+ ++APE + + Y DVY+FGI+L E+ TG P
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 26/208 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKS---FAVECEVTRNIRHRNLVKVFT 269
+G G FG V G + VA+K+ + S S F E +V N+ H LV+++
Sbjct: 32 LGTGQFGVVKYG-KWRGQYDVAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
C+ Q F ++ E+MANG L ++ + RH+ + + L + DV
Sbjct: 87 VCTK---QRPIF--IITEYMANGCLLNYLREM-----RHR----FQTQQLLEMCKDVCEA 132
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
++YL H DL N L++D+ VSDFG++R++ DE+T S+G + +
Sbjct: 133 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEETSSVGSKFPVRWS 188
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFT 417
PE M + SS D+++FG+L+ E+++
Sbjct: 189 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 211 NLIGAGNFGSVYKGILF-ESTTA---VAVKVFN-VLHHDASKSFAVECEVTRNIRHRNLV 265
++G+G FG+VYKGI E T VA+K+ N A+ F E + ++ H +LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
++ C Q LV + M +G L E++H HK N+ S LN +
Sbjct: 81 RLLGVCLSPTIQ------LVTQLMPHGCLLEYVH-------EHK--DNIGSQLLLNWCVQ 125
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
+A + YL + + H DL N+L+ ++DFG+AR LE +++ + G +
Sbjct: 126 IAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 182
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 183 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 192 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 250 ------EEPIYIVGEYMSKGSLLDFLK--GETGKYLRLP------QLVDMAAQIASGMAY 295
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 351
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 26 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 84 ------EEPIYIVCEYMSKGSLLDFLK--GEMGKYLRLP------QLVDMAAQIASGMAY 129
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 185
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + + ++F E +V + +RH LV+++ S
Sbjct: 193 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 251 ------EEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLP------QLVDMAAQIASGMAY 296
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+ R +E +E T G + + APE
Sbjct: 297 VE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIE-DNEYTARQGAKFPIKWTAPE 352
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 353 AALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 23 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M GSL +++ E K + P + ++++ +A + Y
Sbjct: 81 ------EEPIYIVTEYMNKGSLLDFLK--GETGKYLRLP------QLVDMSAQIASGMAY 126
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 127 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEWTARQGAKFPIKWTAPE 182
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 26 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ GSL +++ E K + P + +++A +A + Y
Sbjct: 84 ------EEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLP------QLVDMAAQIASGMAY 129
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 130 VE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 185
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKS---FAVECEVTRNIRHRNLVKVFT 269
+G G FG V G + VA+K+ + S S F E +V N+ H LV+++
Sbjct: 32 LGTGQFGVVKYG-KWRGQYDVAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
C+ Q F ++ E+MANG L ++ + RH+ + + L + DV
Sbjct: 87 VCTK---QRPIF--IITEYMANGCLLNYLREM-----RHR----FQTQQLLEMCKDVCEA 132
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
++YL H DL N L++D+ VSDFG++R++ DE T S+G + +
Sbjct: 133 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWS 188
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFT 417
PE M + SS D+++FG+L+ E+++
Sbjct: 189 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKS---FAVECEVTRNIRHRNLVKVFT 269
+G G FG V G + VA+K+ + S S F E +V N+ H LV+++
Sbjct: 12 LGTGQFGVVKYG-KWRGQYDVAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
C+ Q F ++ E+MANG L ++ + RH+ + + L + DV
Sbjct: 67 VCTK---QRPIF--IITEYMANGCLLNYLREM-----RHR----FQTQQLLEMCKDVCEA 112
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
++YL H DL N L++D+ VSDFG++R++ DE T S+G + +
Sbjct: 113 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWS 168
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFT 417
PE M + SS D+++FG+L+ E+++
Sbjct: 169 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKS---FAVECEVTRNIRHRNLVKVFT 269
+G G FG V G + VA+K+ + S S F E +V N+ H LV+++
Sbjct: 16 LGTGQFGVVKYG-KWRGQYDVAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
C+ Q F ++ E+MANG L ++ + RH+ + + L + DV
Sbjct: 71 VCTK---QRPIF--IITEYMANGCLLNYLREM-----RHR----FQTQQLLEMCKDVCEA 116
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
++YL H DL N L++D+ VSDFG++R++ DE T S+G + +
Sbjct: 117 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWS 172
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFT 417
PE M + SS D+++FG+L+ E+++
Sbjct: 173 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 26 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ G L +++ E K + P + +++A +A + Y
Sbjct: 84 ------EEPIYIVMEYMSKGCLLDFLK--GEMGKYLRLP------QLVDMAAQIASGMAY 129
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 185
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ EF+ GSL E++ ++HK ++ +K L +
Sbjct: 81 GVCYSA---GRRNLKLIMEFLPYGSLREYL-------QKHKE--RIDHIKLLQYTSQICK 128
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG- 387
++YL H DL NIL+++E + DFG+ + L D++ + G +
Sbjct: 129 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 184
Query: 388 -YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 220
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKS---FAVECEVTRNIRHRNLVKVFT 269
+G G FG V G + VA+K+ + S S F E +V N+ H LV+++
Sbjct: 17 LGTGQFGVVKYG-KWRGQYDVAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
C+ Q F ++ E+MANG L ++ + RH+ + + L + DV
Sbjct: 72 VCTK---QRPIF--IITEYMANGCLLNYLREM-----RHR----FQTQQLLEMCKDVCEA 117
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
++YL H DL N L++D+ VSDFG++R++ DE T S+G + +
Sbjct: 118 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWS 173
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFT 417
PE M + SS D+++FG+L+ E+++
Sbjct: 174 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKS---FAVECEVTRNIRHRNLVKVFT 269
+G G FG V G + VA+K+ + S S F E +V N+ H LV+++
Sbjct: 23 LGTGQFGVVKYG-KWRGQYDVAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
C+ Q F ++ E+MANG L ++ + RH+ + + L + DV
Sbjct: 78 VCTK---QRPIF--IITEYMANGCLLNYLREM-----RHR----FQTQQLLEMCKDVCEA 123
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
++YL H DL N L++D+ VSDFG++R++ DE T S+G + +
Sbjct: 124 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWS 179
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFT 417
PE M + SS D+++FG+L+ E+++
Sbjct: 180 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ +N++ L +A ++ +
Sbjct: 79 CT----REPPFYIII-EFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAM 125
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 126 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTA 181
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 182 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 26 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M+ G L +++ E K + P + +++A +A + Y
Sbjct: 84 ------EEPIYIVTEYMSKGCLLDFLK--GEMGKYLRLP------QLVDMAAQIASGMAY 129
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 185
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + TT VA+K + ++F E +V + +RH LV+++ S
Sbjct: 23 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M GSL +++ E K + P + ++++ +A + Y
Sbjct: 81 ------EEPIYIVTEYMNKGSLLDFLK--GETGKYLRLP------QLVDMSAQIASGMAY 126
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + V+DFG+AR +E +E T G + + APE
Sbjct: 127 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 182
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ +N++ L +A ++ +
Sbjct: 83 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAM 129
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 130 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTA 185
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ +N++ L +A ++ +
Sbjct: 83 CT----REPPFYIII-EFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAM 129
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 130 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 185
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ +N++ L +A ++ +
Sbjct: 79 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAM 125
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 126 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTA 181
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 182 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ +N++ L +A ++ +
Sbjct: 91 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAM 137
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 138 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 193
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 194 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 225
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 33/227 (14%)
Query: 210 ENLIGAGNFGSVYKGILF---ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLV 265
E +IGAG FG V G L + AVA+K V + + + F E + H N+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ GV +G +V EFM NG+L+ ++ K G ++ + +
Sbjct: 108 HL----EGVVTRGKPV-MIVIEFMENGALDAFLR---------KHDGQFTVIQLVGMLRG 153
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
+A ++YL H DL NIL++ + VSDFG++R +E E V T
Sbjct: 154 IAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPE-----AVYTT 205
Query: 386 TG------YIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
TG + APE + +S DV+S+GI++ E+ + G RP DM
Sbjct: 206 TGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 252
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ +N++ L +A ++ +
Sbjct: 83 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAM 129
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 130 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 185
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ +N++ L +A ++ +
Sbjct: 83 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAM 129
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 130 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 185
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ +N++ L +A ++ +
Sbjct: 80 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAM 126
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 127 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTA 182
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ +N++ L +A ++ +
Sbjct: 80 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAM 126
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 127 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 182
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ +N++ L +A ++ +
Sbjct: 78 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAM 124
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 180
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ +N++ L +A ++ +
Sbjct: 78 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAM 124
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 180
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ +N++ L +A ++ +
Sbjct: 82 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAM 128
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 129 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 184
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 185 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 216
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ +N++ L +A ++ +
Sbjct: 80 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAM 126
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 127 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 182
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G FG VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ ++++ L +A ++ +
Sbjct: 76 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAM 122
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 123 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTA 178
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+GAG FG V+ G + T VAVK + DA F E + + ++H+ LV+++
Sbjct: 27 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV 82
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG--NLNSLKRLNIAIDVAC 328
+ + ++ E+M NGSL +++ K P L K L++A +A
Sbjct: 83 VT------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAE 126
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ ++ + H DL+ +NIL+ D ++ ++DFG+AR +E +E T G + +
Sbjct: 127 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKW 182
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL E+ T
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+GAG FG V+ G + T VAVK + DA F E + + ++H+ LV+++
Sbjct: 29 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV 84
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG--NLNSLKRLNIAIDVAC 328
+ + ++ E+M NGSL +++ K P L K L++A +A
Sbjct: 85 VT------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAE 128
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ ++ + H DL+ +NIL+ D ++ ++DFG+AR +E +E T G + +
Sbjct: 129 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKW 184
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL E+ T
Sbjct: 185 TAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+GAG FG V+ G + T VAVK + DA F E + + ++H+ LV+++
Sbjct: 30 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV 85
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG--NLNSLKRLNIAIDVAC 328
+ + ++ E+M NGSL +++ K P L K L++A +A
Sbjct: 86 VT------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAE 129
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ ++ + H DL+ +NIL+ D ++ ++DFG+AR +E +E T G + +
Sbjct: 130 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKW 185
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL E+ T
Sbjct: 186 TAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+GAG FG V+ G + T VAVK + DA F E + + ++H+ LV+++
Sbjct: 21 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV 76
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG--NLNSLKRLNIAIDVAC 328
+ + ++ E+M NGSL +++ K P L K L++A +A
Sbjct: 77 VT------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAE 120
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ ++ + H DL+ +NIL+ D ++ ++DFG+AR +E +E T G + +
Sbjct: 121 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKW 176
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL E+ T
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V+ G + T VA+K + +SF E ++ + ++H LV+++ S
Sbjct: 17 LGNGQFGEVWMGT-WNGNTKVAIKTLKP-GTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ +V E+M GSL +++ E + K P NL +++A VA + Y
Sbjct: 75 ------EEPIYIVTEYMNKGSLLDFLK--DGEGRALKLP-NL-----VDMAAQVAAGMAY 120
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +NIL+ + + ++DFG+AR +E +E T G + + APE
Sbjct: 121 IE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIE-DNEXTARQGAKFPIKWTAPE 176
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ + DV+SFGILL E+ T R
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+GAG FG V+ G + T VAVK + DA F E + + ++H+ LV+++
Sbjct: 23 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV 78
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG--NLNSLKRLNIAIDVAC 328
+ + ++ E+M NGSL +++ K P L K L++A +A
Sbjct: 79 VT------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAE 122
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ ++ + H DL+ +NIL+ D ++ ++DFG+AR +E +E T G + +
Sbjct: 123 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKW 178
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL E+ T
Sbjct: 179 TAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+GAG FG V+ G + T VAVK + DA F E + + ++H+ LV+++
Sbjct: 22 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV 77
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG--NLNSLKRLNIAIDVAC 328
+ + ++ E+M NGSL +++ K P L K L++A +A
Sbjct: 78 VT------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAE 121
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ ++ + H DL+ +NIL+ D ++ ++DFG+AR +E +E T G + +
Sbjct: 122 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKW 177
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL E+ T
Sbjct: 178 TAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+GAG FG V+ G + T VAVK + DA F E + + ++H+ LV+++
Sbjct: 27 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV 82
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG--NLNSLKRLNIAIDVAC 328
+ + ++ E+M NGSL +++ K P L K L++A +A
Sbjct: 83 VT------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAE 126
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ ++ + H DL+ +NIL+ D ++ ++DFG+AR +E +E T G + +
Sbjct: 127 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKW 182
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL E+ T
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 28/212 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+GAG FG V+ G + T VAVK + DA F E + + ++H+ LV+++
Sbjct: 31 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV 86
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG--NLNSLKRLNIAIDVAC 328
+ + ++ E+M NGSL +++ K P L K L++A +A
Sbjct: 87 VT------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAE 130
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ ++ + H DL+ +NIL+ D ++ ++DFG+AR +E +E T G + +
Sbjct: 131 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKW 186
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFTGLR 420
APE + DV+SFGILL E+ T R
Sbjct: 187 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+GAG FG V+ G + T VAVK + DA F E + + ++H+ LV+++
Sbjct: 21 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV 76
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG--NLNSLKRLNIAIDVAC 328
+ + ++ E+M NGSL +++ K P L K L++A +A
Sbjct: 77 VT------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAE 120
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ ++ + H DL+ +NIL+ D ++ ++DFG+AR +E +E T G + +
Sbjct: 121 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKW 176
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL E+ T
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 27/244 (11%)
Query: 182 KRGNPTP-SISFPYVSYRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV 240
KR PT +S Y + M + ++ +G G +G VY+G+ + + VAVK
Sbjct: 196 KRNKPTVYGVSPNYDKWEM---ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT--- 249
Query: 241 LHHDASK--SFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM 298
L D + F E V + I+H NLV++ C+ + F ++ EFM G+L +++
Sbjct: 250 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYL 304
Query: 299 HPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT 358
++ +N++ L +A ++ ++YL + H +L N L+ +
Sbjct: 305 RECNRQE--------VNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHL 353
Query: 359 AYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT- 417
V+DFG++R + D T G + + APE ++ S DV++FG+LL E+ T
Sbjct: 354 VKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 412
Query: 418 GLRP 421
G+ P
Sbjct: 413 GMSP 416
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 27/244 (11%)
Query: 182 KRGNPTP-SISFPYVSYRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV 240
KR PT +S Y + M + ++ +G G +G VY+G+ + + VAVK
Sbjct: 238 KRNKPTVYGVSPNYDKWEM---ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT--- 291
Query: 241 LHHDA--SKSFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM 298
L D + F E V + I+H NLV++ C+ + F ++ EFM G+L +++
Sbjct: 292 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYL 346
Query: 299 HPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT 358
++ +N++ L +A ++ ++YL + H +L N L+ +
Sbjct: 347 RECNRQE--------VNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHL 395
Query: 359 AYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT- 417
V+DFG++R + D T G + + APE ++ S DV++FG+LL E+ T
Sbjct: 396 VKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 454
Query: 418 GLRP 421
G+ P
Sbjct: 455 GMSP 458
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+GAG FG V+ G + T VAVK + DA F E + + ++H+ LV+++
Sbjct: 26 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV 81
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG--NLNSLKRLNIAIDVAC 328
+ + ++ E+M NGSL +++ K P L K L++A +A
Sbjct: 82 VT------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAE 125
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ ++ + H DL+ +NIL+ D ++ ++DFG+AR +E +E T G + +
Sbjct: 126 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKW 181
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL E+ T
Sbjct: 182 TAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 40/244 (16%)
Query: 210 ENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS-------KSFAVECEVTRNIRHR 262
E IG G FG V+KG L + + VA+K + + + F E + N+ H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N+VK++ ++ +V EF+ G L H + DK H ++ +L +
Sbjct: 84 NIVKLYGLM-------HNPPRMVMEFVPCGDL---YHRLL--DKAHPIKWSV----KLRL 127
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD--DE---MTAYVSDFGIARFLEAADEQT 377
+D+A ++Y+ + PPI H DL+ NI L DE + A V+DFG+++ +
Sbjct: 128 MLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------QSV 180
Query: 378 RSI-GVEGTTGYIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRPSDDMFKDNLNLR 433
S+ G+ G ++APE +G E SY D YSF ++L + TG P D+ +
Sbjct: 181 HSVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI 239
Query: 434 NCVK 437
N ++
Sbjct: 240 NMIR 243
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKS---FAVECEVTRNIRHRNLVKVFT 269
+G G FG V G + VA+K+ + S S F E +V N+ H LV+++
Sbjct: 17 LGTGQFGVVKYG-KWRGQYDVAIKMIK----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
C+ Q F ++ E+MANG L ++ + RH+ + + L + DV
Sbjct: 72 VCTK---QRPIF--IITEYMANGCLLNYLREM-----RHR----FQTQQLLEMCKDVCEA 117
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
++YL H DL N L++D+ VSDFG++R++ DE T S G + +
Sbjct: 118 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSRGSKFPVRWS 173
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFT 417
PE M + SS D+++FG+L+ E+++
Sbjct: 174 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ ++HK ++ +K L +
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYL-------QKHKE--RIDHIKLLQYTSQICK 125
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG- 387
++YL H DL NIL+++E + DFG+ + L D++ + G +
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 181
Query: 388 -YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ ++HK ++ +K L +
Sbjct: 81 GVCYSA---GRRNLKLIMEYLPYGSLRDYL-------QKHKE--RIDHIKLLQYTSQICK 128
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG- 387
++YL H DL NIL+++E + DFG+ + L D++ + G +
Sbjct: 129 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 184
Query: 388 -YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 220
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ ++HK ++ +K L +
Sbjct: 96 GVCYSA---GRRNLKLIMEYLPYGSLRDYL-------QKHKE--RIDHIKLLQYTSQICK 143
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG- 387
++YL H DL NIL+++E + DFG+ + L D++ + G +
Sbjct: 144 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 199
Query: 388 -YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 235
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ ++HK ++ +K L +
Sbjct: 77 GVCYSA---GRRNLKLIMEYLPYGSLRDYL-------QKHKE--RIDHIKLLQYTSQICK 124
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG- 387
++YL H DL NIL+++E + DFG+ + L D++ + G +
Sbjct: 125 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 180
Query: 388 -YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 181 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ ++HK ++ +K L +
Sbjct: 85 GVCYSA---GRRNLKLIMEYLPYGSLRDYL-------QKHKE--RIDHIKLLQYTSQICK 132
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG- 387
++YL H DL NIL+++E + DFG+ + L D++ + G +
Sbjct: 133 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 188
Query: 388 -YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 189 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 224
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ ++HK ++ +K L +
Sbjct: 82 GVCYSA---GRRNLKLIMEYLPYGSLRDYL-------QKHKE--RIDHIKLLQYTSQICK 129
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG- 387
++YL H DL NIL+++E + DFG+ + L D++ + G +
Sbjct: 130 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 185
Query: 388 -YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 186 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 221
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ ++HK ++ +K L +
Sbjct: 83 GVCYSA---GRRNLKLIMEYLPYGSLRDYL-------QKHKE--RIDHIKLLQYTSQICK 130
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG- 387
++YL H DL NIL+++E + DFG+ + L D++ + G +
Sbjct: 131 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 186
Query: 388 -YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 187 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 222
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+GAG FG V+ G + T VAVK + DA F E + + ++H+ LV+++
Sbjct: 21 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV 76
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG--NLNSLKRLNIAIDVAC 328
+ + ++ E+M NGSL +++ K P L K L++A +A
Sbjct: 77 VT------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAE 120
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ ++ + H DL+ +NIL+ D ++ ++DFG+AR +E +E T G + +
Sbjct: 121 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKW 176
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL E+ T
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ ++HK ++ +K L +
Sbjct: 109 GVCYSA---GRRNLKLIMEYLPYGSLRDYL-------QKHKE--RIDHIKLLQYTSQICK 156
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG- 387
++YL H DL NIL+++E + DFG+ + L D++ + G +
Sbjct: 157 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 212
Query: 388 -YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 213 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 248
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ ++++ L +A ++ +
Sbjct: 76 CT----REPPFYIII-EFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAM 122
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 123 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTA 178
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+GAG FG V+ G + T VAVK + DA F E + + ++H+ LV+++
Sbjct: 16 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV 71
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG--NLNSLKRLNIAIDVAC 328
+ + ++ E+M NGSL +++ K P L K L++A +A
Sbjct: 72 VT------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAE 115
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ ++ + H DL+ +NIL+ D ++ ++DFG+AR +E +E T G + +
Sbjct: 116 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKW 171
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL E+ T
Sbjct: 172 TAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ ++HK ++ +K L +
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYL-------QKHKE--RIDHIKLLQYTSQICK 125
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG- 387
++YL H DL NIL+++E + DFG+ + L D++ + G +
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 181
Query: 388 -YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ ++HK ++ +K L +
Sbjct: 76 GVCYSA---GRRNLKLIMEYLPYGSLRDYL-------QKHKE--RIDHIKLLQYTSQICK 123
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG- 387
++YL H DL NIL+++E + DFG+ + L D++ + G +
Sbjct: 124 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 179
Query: 388 -YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 180 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ ++HK ++ +K L +
Sbjct: 84 GVCYSA---GRRNLKLIMEYLPYGSLRDYL-------QKHKE--RIDHIKLLQYTSQICK 131
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG- 387
++YL H DL NIL+++E + DFG+ + L D++ + G +
Sbjct: 132 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 187
Query: 388 -YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 188 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 223
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ ++++ L +A ++ +
Sbjct: 78 CT----REPPFYIII-EFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAM 124
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 180
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ ++++ L +A ++ +
Sbjct: 78 CT----REPPFYIII-EFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAM 124
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 180
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ ++++ L +A ++ +
Sbjct: 83 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAM 129
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 130 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 185
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 32/217 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH--DASKSFAVECEVTRNIRHRNLVKVFTA 270
IG+G+FG+VYKG + VAVK+ V+ + ++F E V R RH N++ +F
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMG 99
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ D A+V ++ SL + +H +E K + ++IA A +
Sbjct: 100 -----YMTKDNLAIVTQWCEGSSLYKHLH--VQETK-------FQMFQLIDIARQTAQGM 145
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG--- 387
YLH I H D+K +NI L + +T + DFG+A + S VE TG
Sbjct: 146 DYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLA---TVKSRWSGSQQVEQPTGSVL 199
Query: 388 YIAPEYGMGHE---VSSYGDVYSFGILLLEMFTGLRP 421
++APE + S DVYS+GI+L E+ TG P
Sbjct: 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ ++HK ++ +K L +
Sbjct: 96 GVCYSA---GRRNLKLIMEYLPYGSLRDYL-------QKHKE--RIDHIKLLQYTSQICK 143
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG- 387
++YL H DL NIL+++E + DFG+ + L D++ + G +
Sbjct: 144 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 199
Query: 388 -YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 235
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 102/223 (45%), Gaps = 44/223 (19%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
IG+G+FG+VYKG + VAVK+ NV + +F E V R RH N++
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 84
Query: 271 CSGVDFQGNDFK---ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
F G K A+V ++ SL +H + K ++IA A
Sbjct: 85 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHA---------SETKFEMKKLIDIARQTA 130
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG------ 381
+ YLH I H DLK +NI L ++ T + DFG+ A E++R G
Sbjct: 131 RGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGL------ATEKSRWSGSHQFEQ 181
Query: 382 VEGTTGYIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
+ G+ ++APE + + Y DVY+FGI+L E+ TG P
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 40/230 (17%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRN-------I 259
+ E +IG G FG VY+ F VAVK HD + + E R +
Sbjct: 9 LTLEEIIGIGGFGKVYRA--FWIGDEVAVKA---ARHDPDEDISQTIENVRQEAKLFAML 63
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
+H N++ A GV + + LV EF G P+ + P ++
Sbjct: 64 KHPNII----ALRGVCLKEPNL-CLVMEFARGG-------PLNRVLSGKRIPPDI----L 107
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEM--------TAYVSDFGIARFLE 371
+N A+ +A + YLH + PI H DLK SNIL+ ++ ++DFG+AR
Sbjct: 108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW- 166
Query: 372 AADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+T + G ++APE S DV+S+G+LL E+ TG P
Sbjct: 167 ---HRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ ++HK ++ +K L +
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYL-------QKHKE--RIDHIKLLQYTSQICK 125
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADE--QTRSIGVEGTT 386
++YL H DL NIL+++E + DFG+ + L E + + G E
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPG-ESPI 181
Query: 387 GYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 32/217 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
IG+G+FG+VYKG + VAVK+ NV + +F E V R RH N++
Sbjct: 20 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 72
Query: 271 CSGVDFQGNDFK---ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
F G K A+V ++ SL +H + K ++IA A
Sbjct: 73 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHA---------SETKFEMKKLIDIARQTA 118
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
+ YLH I H DLK +NI L ++ T + DFG+A + + G+
Sbjct: 119 RGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 388 YIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
++APE + + Y DVY+FGI+L E+ TG P
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 38/220 (17%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
IG+G+FG+VYKG + VAVK+ NV + +F E V R RH N++
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ A+V ++ SL +H + K ++IA A +
Sbjct: 89 STAPQL------AIVTQWCEGSSLYHHLHA---------SETKFEMKKLIDIARQTARGM 133
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG------VEG 384
YLH I H DLK +NI L ++ T + DFG+ A E++R G + G
Sbjct: 134 DYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGL------ATEKSRWSGSHQFEQLSG 184
Query: 385 TTGYIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
+ ++APE + + Y DVY+FGI+L E+ TG P
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ ++++ L +A ++ +
Sbjct: 78 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAM 124
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 180
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ ++++ L +A ++ +
Sbjct: 78 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAM 124
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 180
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 28/209 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+GAG G V+ G + T VAVK + DA F E + + ++H+ LV+++
Sbjct: 21 LGAGQAGEVWMG-YYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV 76
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG--NLNSLKRLNIAIDVAC 328
+ + ++ E+M NGSL +++ K P L K L++A +A
Sbjct: 77 VT------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAE 120
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ ++ + H DL+ +NIL+ D ++ ++DFG+AR +E A+ R G + +
Sbjct: 121 GMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTARE-GAKFPIKW 176
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL E+ T
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG+G FG V+ G + VA+K + + F E EV + H LV+++ C
Sbjct: 18 IGSGQFGLVHLGYWL-NKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVC- 74
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
LV+EFM +G L +++ G + L + +DV + Y
Sbjct: 75 ----LEQAPICLVFEFMEHGCLSDYLR---------TQRGLFAAETLLGMCLDVCEGMAY 121
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
L C + H DL N L+ + VSDFG+ RF+ D+ T S G + + +PE
Sbjct: 122 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPE 177
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFT 417
SS DV+SFG+L+ E+F+
Sbjct: 178 VFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 114/244 (46%), Gaps = 40/244 (16%)
Query: 210 ENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS-------KSFAVECEVTRNIRHR 262
E IG G FG V+KG L + + VA+K + + + F E + N+ H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N+VK++ ++ +V EF+ G L H + DK H ++ +L +
Sbjct: 84 NIVKLYGLM-------HNPPRMVMEFVPCGDL---YHRLL--DKAHPIKWSV----KLRL 127
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD--DE---MTAYVSDFGIARFLEAADEQT 377
+D+A ++Y+ + PPI H DL+ NI L DE + A V+DFG ++ +
Sbjct: 128 MLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ------QSV 180
Query: 378 RSI-GVEGTTGYIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRPSDDMFKDNLNLR 433
S+ G+ G ++APE +G E SY D YSF ++L + TG P D+ +
Sbjct: 181 HSVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI 239
Query: 434 NCVK 437
N ++
Sbjct: 240 NMIR 243
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G FG VY+G + S VAVK ++ + + F +E + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C GV Q + ++ E MA G L+ ++ E R P +L L L++A D+
Sbjct: 113 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR---ETRPRPSQPSSLAMLDLLHVARDI 164
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
AC +YL + H D+ N LL A + DFG+AR + A +
Sbjct: 165 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M +S D +SFG+LL E+F+
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG+G FG V+ G + VA+K + + F E EV + H LV+++ C
Sbjct: 13 IGSGQFGLVHLGYWL-NKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVC- 69
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
LV+EFM +G L +++ G + L + +DV + Y
Sbjct: 70 ----LEQAPICLVFEFMEHGCLSDYLR---------TQRGLFAAETLLGMCLDVCEGMAY 116
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
L C + H DL N L+ + VSDFG+ RF+ D+ T S G + + +PE
Sbjct: 117 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPE 172
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFT 417
SS DV+SFG+L+ E+F+
Sbjct: 173 VFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 27/225 (12%)
Query: 210 ENLIGAGNFGSVYKGILF---ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLV 265
E +IGAG FG V +G L + + VA+K + + + F E + H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 266 KVFTACSGVDFQGNDFKALVY-EFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
++ + N ++ EFM NG+L+ ++ G ++ + +
Sbjct: 81 RLEGVVT------NSMPVMILTEFMENGALDSFLR---------LNDGQFTVIQLVGMLR 125
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE---AADEQTRSIG 381
+A ++YL + H DL NIL++ + VSDFG++RFLE + +T S+G
Sbjct: 126 GIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLG 182
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + APE + +S D +S+GI++ E+ + G RP DM
Sbjct: 183 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 227
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKS---FAVECEVTRNIRHRNLVKVFT 269
IG+G FG V+ G + VA+K + S S F E EV + H LV+++
Sbjct: 35 IGSGQFGLVHLGYWL-NKDKVAIKTIK----EGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
C LV+EFM +G L +++ G + L + +DV
Sbjct: 90 VC-----LEQAPICLVFEFMEHGCLSDYLR---------TQRGLFAAETLLGMCLDVCEG 135
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
+ YL C + H DL N L+ + VSDFG+ RF+ D+ T S G + +
Sbjct: 136 MAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWA 191
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFT 417
+PE SS DV+SFG+L+ E+F+
Sbjct: 192 SPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G G FG VY+G + S VAVK V F +E + + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C GV Q + ++ E MA G L+ ++ E R P +L L L++A D+
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR---ETRPRPSQPSSLAMLDLLHVARDI 150
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
AC +YL + H D+ N LL A + DFG+AR + A +
Sbjct: 151 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M +S D +SFG+LL E+F+
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG+G FG V+ G + VA+K + + F E EV + H LV+++ C
Sbjct: 15 IGSGQFGLVHLGYWL-NKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVC- 71
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
LV+EFM +G L +++ G + L + +DV + Y
Sbjct: 72 ----LEQAPICLVFEFMEHGCLSDYLR---------TQRGLFAAETLLGMCLDVCEGMAY 118
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
L C + H DL N L+ + VSDFG+ RF+ D+ T S G + + +PE
Sbjct: 119 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPE 174
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFT 417
SS DV+SFG+L+ E+F+
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G G FG VY+G + S VAVK V F +E + + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C GV Q + ++ E MA G L+ ++ E R P +L L L++A D+
Sbjct: 113 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR---ETRPRPSQPSSLAMLDLLHVARDI 164
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
AC +YL + H D+ N LL A + DFG+AR + A +
Sbjct: 165 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M +S D +SFG+LL E+F+
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 210 ENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFT 269
E +GAG FG V+ + T VAVK ++F E V + ++H LVK+
Sbjct: 20 EKKLGAGQFGEVWMAT-YNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHA 77
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
+ ++ EFMA GSL +++ ++E + P K ++ + +A
Sbjct: 78 VVTKEPIY------IITEFMAKGSLLDFLK--SDEGSKQPLP------KLIDFSAQIAEG 123
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
+ ++ Q H DL+ +NIL+ + ++DFG+AR +E +E T G + +
Sbjct: 124 MAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWT 179
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL+E+ T
Sbjct: 180 APEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY+G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + F ++ EFM G+L +++ ++ ++++ L +A ++ +
Sbjct: 76 CT----REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAM 122
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 123 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTA 178
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE ++ S DV++FG+LL E+ T G+ P
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRN--IRHRNLVKVFT 269
LIG G +G+VYKG L E VAVKVF+ + ++F E + R + H N+ +
Sbjct: 20 LIGRGRYGAVYKGSLDER--PVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIV 74
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
V G LV E+ NGSL +++ T + + +A V
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----------DWVSSCRLAHSVTRG 123
Query: 330 LKYLHLDC------QPPIAHCDLKPSNILLDDEMTAYVSDFGIA------RFLEAADEQT 377
L YLH + +P I+H DL N+L+ ++ T +SDFG++ R + +E
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 378 RSIGVEGTTGYIAPEYGMG-------HEVSSYGDVYSFGILLLEMF 416
+I GT Y+APE G D+Y+ G++ E+F
Sbjct: 184 AAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ E ++ +K L +
Sbjct: 81 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQAHAE---------RIDHIKLLQYTSQICK 128
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG- 387
++YL H DL NIL+++E + DFG+ + L D++ + G +
Sbjct: 129 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPI 184
Query: 388 -YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 220
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G G FG VY+G + S VAVK V F +E + H+N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C GV Q + ++ E MA G L+ ++ E R P +L L L++A D+
Sbjct: 115 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR---ETRPRPSQPSSLAMLDLLHVARDI 166
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
AC +YL + H D+ N LL A + DFG+AR + A +
Sbjct: 167 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 223
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M +S D +SFG+LL E+F+
Sbjct: 224 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G G FG VY+G + S VAVK V F +E + H+N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C GV Q + ++ E MA G L+ ++ E R P +L L L++A D+
Sbjct: 105 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR---ETRPRPSQPSSLAMLDLLHVARDI 156
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
AC +YL + H D+ N LL A + DFG+AR + A +
Sbjct: 157 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 213
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M +S D +SFG+LL E+F+
Sbjct: 214 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G G FG VY+G + S VAVK V F +E + H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C GV Q + ++ E MA G L+ ++ E R P +L L L++A D+
Sbjct: 98 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR---ETRPRPSQPSSLAMLDLLHVARDI 149
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
AC +YL + H D+ N LL A + DFG+AR + A +
Sbjct: 150 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M +S D +SFG+LL E+F+
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Query: 210 ENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFT 269
E +GAG FG V+ + T VAVK ++F E V + ++H LVK+
Sbjct: 193 EKKLGAGQFGEVWMAT-YNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHA 250
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
+ + ++ EFMA GSL +++ ++E + P K ++ + +A
Sbjct: 251 VVT------KEPIYIITEFMAKGSLLDFLK--SDEGSKQPLP------KLIDFSAQIAEG 296
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
+ ++ Q H DL+ +NIL+ + ++DFG+AR +E +E T G + +
Sbjct: 297 MAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWT 352
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL+E+ T
Sbjct: 353 APEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKV 267
+G G FG V+ + + VAVK A K F E E+ N++H ++VK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHP------ITEEDKRHKAPGNLNSLKRLN 321
+ C D +V+E+M +G L +++ I + + +A G L + L+
Sbjct: 83 YGVCG-----DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
IA +A + YL H DL N L+ + + DFG++R + + D
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M + ++ DV+SFG++L E+FT
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G G FG VY+G + S VAVK V F +E + H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C GV Q + ++ E MA G L+ ++ E R P +L L L++A D+
Sbjct: 98 ----CIGVSLQSLP-RFILMELMAGGDLKSFLR---ETRPRPSQPSSLAMLDLLHVARDI 149
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
AC +YL + H D+ N LL A + DFG+AR + A +
Sbjct: 150 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M +S D +SFG+LL E+F+
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G G FG VY+G + S VAVK V F +E + H+N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C GV Q + ++ E MA G L+ ++ E R P +L L L++A D+
Sbjct: 90 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR---ETRPRPSQPSSLAMLDLLHVARDI 141
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
AC +YL + H D+ N LL A + DFG+AR + A +
Sbjct: 142 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 198
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M +S D +SFG+LL E+F+
Sbjct: 199 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G G FG VY+G + S VAVK V F +E + H+N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C GV Q + ++ E MA G L+ ++ E R P +L L L++A D+
Sbjct: 125 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR---ETRPRPSQPSSLAMLDLLHVARDI 176
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
AC +YL + H D+ N LL A + DFG+AR + A +
Sbjct: 177 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 233
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M +S D +SFG+LL E+F+
Sbjct: 234 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G G FG VY+G + S VAVK V F +E + H+N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C GV Q + ++ E MA G L+ ++ E R P +L L L++A D+
Sbjct: 139 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR---ETRPRPSQPSSLAMLDLLHVARDI 190
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
AC +YL + H D+ N LL A + DFG+AR + A +
Sbjct: 191 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 247
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M +S D +SFG+LL E+F+
Sbjct: 248 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G G FG VY+G + S VAVK V F +E + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C GV Q + ++ E MA G L+ ++ E R P +L L L++A D+
Sbjct: 113 ----CIGVSLQSLP-RFILMELMAGGDLKSFLR---ETRPRPSQPSSLAMLDLLHVARDI 164
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
AC +YL + H D+ N LL A + DFG+AR + A +
Sbjct: 165 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M +S D +SFG+LL E+F+
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G G FG VY+G + S VAVK V F +E + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C GV Q + ++ E MA G L+ ++ E R P +L L L++A D+
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR---ETRPRPSQPSSLAMLDLLHVARDI 150
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
AC +YL + H D+ N LL A + DFG+AR + A +
Sbjct: 151 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M +S D +SFG+LL E+F+
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 94 FVKLY-----FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDE---------TCTRFYTA 139
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 140 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 195
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE S D+++ G ++ ++ GL P
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 210 ENLIGAGNFGSVYKGILF---ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLV 265
E +IGAG FG V G L + VA+K + + + F E + H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 266 K---VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
V T + V ++ EFM NGSL+ ++ + G ++ + +
Sbjct: 98 HLEGVVTKSTPV--------MIITEFMENGSLDSFLR---------QNDGQFTVIQLVGM 140
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE---AADEQTRS 379
+A +KYL H DL NIL++ + VSDFG++RFLE + T +
Sbjct: 141 LRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+G + + APE + +S DV+S+GI++ E+ + G RP DM
Sbjct: 198 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 244
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 116/244 (47%), Gaps = 27/244 (11%)
Query: 182 KRGNPT-PSISFPYVSYRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV 240
KR PT +S Y + M + ++ +G G +G VY+G+ + + VAVK
Sbjct: 199 KRNKPTIYGVSPNYDKWEM---ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT--- 252
Query: 241 LHHDASK--SFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM 298
L D + F E V + I+H NLV++ C+ + F ++ EFM G+L +++
Sbjct: 253 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYL 307
Query: 299 HPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT 358
++ ++++ L +A ++ ++YL + H +L N L+ +
Sbjct: 308 RECNRQE--------VSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHL 356
Query: 359 AYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT- 417
V+DFG++R + D T G + + APE ++ S DV++FG+LL E+ T
Sbjct: 357 VKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 415
Query: 418 GLRP 421
G+ P
Sbjct: 416 GMSP 419
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+GAG FG V+ G + T VAVK + DA F E + + ++H+ LV+++
Sbjct: 17 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAV 72
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG--NLNSLKRLNIAIDVAC 328
+ + ++ E+M NGSL +++ K P L K L++A +A
Sbjct: 73 VT------QEPIYIITEYMENGSLVDFL----------KTPSGIKLTINKLLDMAAQIAE 116
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ ++ + H +L+ +NIL+ D ++ ++DFG+AR +E +E T G + +
Sbjct: 117 GMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKW 172
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL E+ T
Sbjct: 173 TAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 103/237 (43%), Gaps = 18/237 (7%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDAS--KSFAVECEVTRNIRHRNLVKVF 268
++G G V+ VAVKV L D S F E + + H +V V+
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
+ +V E++ +L + +H TE G + + + + D
Sbjct: 79 DTGEA-ETPAGPLPYIVMEYVDGVTLRDIVH--TE--------GPMTPKRAIEVIADACQ 127
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFL-EAADEQTRSIGVEGTTG 387
L + H Q I H D+KP+NI++ V DFGIAR + ++ + T++ V GT
Sbjct: 128 ALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKSALPERA 444
Y++PE G V + DVYS G +L E+ TG P D++ ++ + +P A
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSA 241
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 40/244 (16%)
Query: 210 ENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS-------KSFAVECEVTRNIRHR 262
E IG G FG V+KG L + + VA+K + + + F E + N+ H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N+VK++ ++ +V EF+ G L H + DK H ++ +L +
Sbjct: 84 NIVKLYGLM-------HNPPRMVMEFVPCGDL---YHRLL--DKAHPIKWSV----KLRL 127
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD--DE---MTAYVSDFGIARFLEAADEQT 377
+D+A ++Y+ + PPI H DL+ NI L DE + A V+DF +++ +
Sbjct: 128 MLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------QSV 180
Query: 378 RSI-GVEGTTGYIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRPSDDMFKDNLNLR 433
S+ G+ G ++APE +G E SY D YSF ++L + TG P D+ +
Sbjct: 181 HSVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI 239
Query: 434 NCVK 437
N ++
Sbjct: 240 NMIR 243
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G G FG VY+G + S VAVK V F +E + H+N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C GV Q + ++ E MA G L+ ++ E R P +L L L++A D+
Sbjct: 116 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR---ETRPRPSQPSSLAMLDLLHVARDI 167
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
AC +YL + H D+ N LL A + DFG+AR + A +
Sbjct: 168 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 224
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M +S D +SFG+LL E+F+
Sbjct: 225 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 96/225 (42%), Gaps = 30/225 (13%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNL 264
K E ++G G FG V K A V + + K+F VE + H N+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKA----KWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNI 64
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH---PITEEDKRHKAPGNLNSLKRLN 321
VK++ AC + LV E+ GSL +H P+ H ++
Sbjct: 65 VKLYGACL-------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHA----------MS 107
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAY-VSDFGIARFLEAADEQTRSI 380
+ + + YLH + H DLKP N+LL T + DFG A D QT
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMT 162
Query: 381 GVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDM 425
+G+ ++APE G S DV+S+GI+L E+ T +P D++
Sbjct: 163 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 207
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 210 ENLIGAGNFGSVYKGILF---ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLV 265
E +IG G FG V G L + VA+K + D + F E + H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 266 K---VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
V T C V ++ E+M NGSL+ ++ K G ++ + +
Sbjct: 94 HLEGVVTKCKPV--------MIITEYMENGSLDAFLR---------KNDGRFTVIQLVGM 136
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+ +KYL H DL NIL++ + VSDFG++R LE E + G
Sbjct: 137 LRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 193
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + APE + +S DV+S+GI++ E+ + G RP DM
Sbjct: 194 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 96/225 (42%), Gaps = 30/225 (13%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNL 264
K E ++G G FG V K A V + + K+F VE + H N+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKA----KWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNI 63
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH---PITEEDKRHKAPGNLNSLKRLN 321
VK++ AC + LV E+ GSL +H P+ H ++
Sbjct: 64 VKLYGACL-------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHA----------MS 106
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAY-VSDFGIARFLEAADEQTRSI 380
+ + + YLH + H DLKP N+LL T + DFG A D QT
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMT 161
Query: 381 GVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDM 425
+G+ ++APE G S DV+S+GI+L E+ T +P D++
Sbjct: 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 210 ENLIGAGNFGSVYKGILF---ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLV 265
E +IG G FG V G L + VA+K + D + F E + H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 266 K---VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
V T C V ++ E+M NGSL+ ++ K G ++ + +
Sbjct: 73 HLEGVVTKCKPV--------MIITEYMENGSLDAFLR---------KNDGRFTVIQLVGM 115
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+ +KYL H DL NIL++ + VSDFG++R LE E + G
Sbjct: 116 LRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 172
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + APE + +S DV+S+GI++ E+ + G RP DM
Sbjct: 173 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 217
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 210 ENLIGAGNFGSVYKGILF---ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLV 265
E +IG G FG V G L + VA+K + D + F E + H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 266 K---VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
V T C V ++ E+M NGSL+ ++ K G ++ + +
Sbjct: 79 HLEGVVTKCKPV--------MIITEYMENGSLDAFLR---------KNDGRFTVIQLVGM 121
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+ +KYL H DL NIL++ + VSDFG++R LE E + G
Sbjct: 122 LRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 178
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + APE + +S DV+S+GI++ E+ + G RP DM
Sbjct: 179 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 223
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 210 ENLIGAGNFGSVYKGILF---ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLV 265
E +IGAG FG V +G L + + VA+K + + + F E + H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 266 KVFTACSGVDFQGNDFKALVY-EFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
++ + N ++ EFM NG+L+ ++ G ++ + +
Sbjct: 79 RLEGVVT------NSMPVMILTEFMENGALDSFLR---------LNDGQFTVIQLVGMLR 123
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ---TRSIG 381
+A ++YL + H DL NIL++ + VSDFG++RFLE T S+G
Sbjct: 124 GIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG 180
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + APE + +S D +S+GI++ E+ + G RP DM
Sbjct: 181 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 225
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVK-VFNVLHHDASKSFAVECEVTRNIRHRNLV 265
+ + +G G FG V + I ++ VA+K L + + +E ++ + + H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 266 KVFTACSGVD-FQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
G+ ND L E+ G L ++++ N LK I
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE----------NCCGLKEGPIRT 126
Query: 325 ---DVACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTR 378
D++ L+YLH + I H DLKP NI+L + + D G A+ L+ + T
Sbjct: 127 LLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 183
Query: 379 SIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+G T Y+APE + + D +SFG L E TG RP
Sbjct: 184 FVG---TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDAS--KSFAVECEVTRNIRHRNLVKVF 268
++G G V+ VAVKV L D S F E + + H +V V+
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
A + +V E++ +L + +H TE G + + + + D
Sbjct: 79 -ATGEAETPAGPLPYIVMEYVDGVTLRDIVH--TE--------GPMTPKRAIEVIADACQ 127
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFL-EAADEQTRSIGVEGTTG 387
L + H Q I H D+KP+NI++ V DFGIAR + ++ + T++ V GT
Sbjct: 128 ALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE G V + DVYS G +L E+ TG P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG+G FG V+ G + VA+K + + F E EV + H LV+++ C
Sbjct: 15 IGSGQFGLVHLGYWL-NKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVC- 71
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
LV+EFM +G L +++ G + L + +DV + Y
Sbjct: 72 ----LEQAPICLVFEFMEHGCLSDYLR---------TQRGLFAAETLLGMCLDVCEGMAY 118
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
L + + H DL N L+ + VSDFG+ RF+ D+ T S G + + +PE
Sbjct: 119 LE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPE 174
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFT 417
SS DV+SFG+L+ E+F+
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVK-VFNVLHHDASKSFAVECEVTRNIRHRNLV 265
+ + +G G FG V + I ++ VA+K L + + +E ++ + + H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 266 KVFTACSGVD-FQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
G+ ND L E+ G L ++++ N LK I
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE----------NCCGLKEGPIRT 125
Query: 325 ---DVACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTR 378
D++ L+YLH + I H DLKP NI+L + + D G A+ L+ + T
Sbjct: 126 LLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 182
Query: 379 SIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+G T Y+APE + + D +SFG L E TG RP
Sbjct: 183 FVG---TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK + + F E E+ ++++H N+VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
C G L+ E++ GSL +++ ++HK ++ +K L +
Sbjct: 79 GVCYSA---GRRNLKLIMEYLPYGSLRDYL-------QKHKE--RIDHIKLLQYTSQICK 126
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADE--QTRSIGVEGTT 386
++YL H +L NIL+++E + DFG+ + L E + + G E
Sbjct: 127 GMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPG-ESPI 182
Query: 387 GYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
+ APE + S DV+SFG++L E+FT + S
Sbjct: 183 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 218
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 16/213 (7%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKV 267
+G G FG V+ + + VAVK +A K F E E+ N++H ++VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMH---PITEEDKRHKAPGNLNSLKRLNIAI 324
+ C +G+ +V+E+M +G L +++ P P L + L+IA
Sbjct: 81 YGVC----VEGDPL-IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+A + YL H DL N L+ + + + DFG++R + + D
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M + ++ DV+S G++L E+FT
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG+G FG V+ G + VA+K + + F E EV + H LV+++ C
Sbjct: 16 IGSGQFGLVHLGYWL-NKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVC- 72
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
LV EFM +G L +++ G + L + +DV + Y
Sbjct: 73 ----LEQAPICLVTEFMEHGCLSDYLR---------TQRGLFAAETLLGMCLDVCEGMAY 119
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
L C + H DL N L+ + VSDFG+ RF+ D+ T S G + + +PE
Sbjct: 120 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPE 175
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFT 417
SS DV+SFG+L+ E+F+
Sbjct: 176 VFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 36/211 (17%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDAS-KSFAVECEVTRNIRHRNLVKV 267
IG G FG V Y+G VAVK + +DA+ ++F E V +RH NLV++
Sbjct: 29 IGKGEFGDVMLGDYRG------NKVAVKC---IKNDATAQAFLAEASVMTQLRHSNLVQL 79
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
GV + +V E+MA GSL +++ R + L L ++DV
Sbjct: 80 L----GVIVEEKGGLYIVTEYMAKGSLVDYL--------RSRGRSVLGGDCLLKFSLDVC 127
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ-TRSIGVEGTT 386
++YL + H DL N+L+ ++ A VSDFG+ + EA+ Q T + V+ T
Sbjct: 128 EAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVKWT- 181
Query: 387 GYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + S+ DV+SFGILL E+++
Sbjct: 182 ---APEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 36/211 (17%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDAS-KSFAVECEVTRNIRHRNLVKV 267
IG G FG V Y+G VAVK + +DA+ ++F E V +RH NLV++
Sbjct: 14 IGKGEFGDVMLGDYRG------NKVAVKC---IKNDATAQAFLAEASVMTQLRHSNLVQL 64
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
GV + +V E+MA GSL +++ R + L L ++DV
Sbjct: 65 L----GVIVEEKGGLYIVTEYMAKGSLVDYL--------RSRGRSVLGGDCLLKFSLDVC 112
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ-TRSIGVEGTT 386
++YL + H DL N+L+ ++ A VSDFG+ + EA+ Q T + V+ T
Sbjct: 113 EAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVKWT- 166
Query: 387 GYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + S+ DV+SFGILL E+++
Sbjct: 167 ---APEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 36/211 (17%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDAS-KSFAVECEVTRNIRHRNLVKV 267
IG G FG V Y+G VAVK + +DA+ ++F E V +RH NLV++
Sbjct: 201 IGKGEFGDVMLGDYRG------NKVAVKC---IKNDATAQAFLAEASVMTQLRHSNLVQL 251
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
GV + +V E+MA GSL +++ R + L L ++DV
Sbjct: 252 L----GVIVEEKGGLYIVTEYMAKGSLVDYL--------RSRGRSVLGGDCLLKFSLDVC 299
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ-TRSIGVEGTT 386
++YL + H DL N+L+ ++ A VSDFG+ + EA+ Q T + V+ T
Sbjct: 300 EAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVKWT- 353
Query: 387 GYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + S+ DV+SFGILL E+++
Sbjct: 354 ---APEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VY G+ + + VAVK L D + F E V + I+H NLV++
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKT---LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
C+ + + +V E+M G+L +++ E+ + ++ L +A ++ +
Sbjct: 97 CT---LEPPFY--IVTEYMPYGNLLDYLRECNREE--------VTAVVLLYMATQISSAM 143
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+YL + H DL N L+ + V+DFG++R + D T G + + A
Sbjct: 144 EYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 199
Query: 391 PEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
PE + S DV++FG+LL E+ T G+ P
Sbjct: 200 PESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDAS--KSFAVECEVTRNIRHRNLVKVF 268
++G G V+ VAVKV L D S F E + + H +V V+
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
+ +V E++ +L + +H TE G + + + + D
Sbjct: 79 DTGEA-ETPAGPLPYIVMEYVDGVTLRDIVH--TE--------GPMTPKRAIEVIADACQ 127
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFL-EAADEQTRSIGVEGTTG 387
L + H Q I H D+KP+NI++ V DFGIAR + ++ + T++ V GT
Sbjct: 128 ALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE G V + DVYS G +L E+ TG P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 213 IGAGNFGSVYKGILFESTT---AVAVKVFNV---LHHDASKSFAVECEVTRNIRHRNLVK 266
+G G +VY L E T VA+K + + K F E + + H+N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
+ VD + +D LV E++ +L E++ ++ G L+ +N +
Sbjct: 76 MI----DVD-EEDDCYYLVMEYIEGPTLSEYI----------ESHGPLSVDTAINFTNQI 120
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT 386
+K+ H D + I H D+KP NIL+D T + DFGIA+ L + T++ V GT
Sbjct: 121 LDGIKHAH-DMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKAL-SETSLTQTNHVLGTV 176
Query: 387 GYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y +PE G D+YS GI+L EM G P
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 92 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 137
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 138 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV 193
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G G FG VY+G + S VAVK V F +E + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C GV Q + ++ E MA G L+ ++ E R P +L L L++A D+
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR---ETRPRPSQPSSLAMLDLLHVARDI 150
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
AC +YL + H D+ N LL A + DFG+A+ + A +
Sbjct: 151 ACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAM 207
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++ PE M +S D +SFG+LL E+F+
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 95 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 140
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 141 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 196
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 72 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 117
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 118 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 173
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 174 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 122/301 (40%), Gaps = 39/301 (12%)
Query: 213 IGAGNFGSVYKG-----ILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKV 267
+G G FG V+ + + VAVK A + F E E+ ++H+++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDK-----RHKAPGNLNSLKRLNI 322
F C+ +G +V+E+M +G L ++ + K APG L + L +
Sbjct: 109 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGV 382
A VA + YL H DL N L+ + + DFG++R + + D
Sbjct: 164 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 383 EGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLRNCVKSALP 441
++ PE + + ++ DV+SFG++L E+FT G +P + N +C+
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL--SNTEAIDCITQG-- 276
Query: 442 ERAEEIRASSGSTQRXXXXXXXXXXXXXGVACSAEQPGERMKINDVEPRLRLIKKKLLEA 501
E RA C +P +R I DV RL + L +A
Sbjct: 277 RELERPRACPPEVYAIMR------------GCWQREPQQRHSIKDVHARL----QALAQA 320
Query: 502 P 502
P
Sbjct: 321 P 321
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 23/225 (10%)
Query: 207 FSSENLIGAGNFGSVYKGIL---FESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHR 262
S + ++GAG FG V G L + +VA+K V + + + F E + H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N++++ GV + +V E+M NGSL+ ++ ++H A ++ + +
Sbjct: 107 NIIRL----EGVVTKSKPV-MIVTEYMENGSLDSFL-------RKHDA--QFTVIQLVGM 152
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+A +KYL H DL NIL++ + VSDFG+AR LE E + G
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + +PE + +S DV+S+GI+L E+ + G RP +M
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 71 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 116
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 117 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 172
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 173 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 94 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 139
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 140 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 97 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 142
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 143 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 198
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 199 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 94 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 139
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 140 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 122/301 (40%), Gaps = 39/301 (12%)
Query: 213 IGAGNFGSVYKG-----ILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKV 267
+G G FG V+ + + VAVK A + F E E+ ++H+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDK-----RHKAPGNLNSLKRLNI 322
F C+ +G +V+E+M +G L ++ + K APG L + L +
Sbjct: 80 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGV 382
A VA + YL H DL N L+ + + DFG++R + + D
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 383 EGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLRNCVKSALP 441
++ PE + + ++ DV+SFG++L E+FT G +P + N +C+
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL--SNTEAIDCITQG-- 247
Query: 442 ERAEEIRASSGSTQRXXXXXXXXXXXXXGVACSAEQPGERMKINDVEPRLRLIKKKLLEA 501
E RA C +P +R I DV RL + L +A
Sbjct: 248 RELERPRACPPEVYAIMR------------GCWQREPQQRHSIKDVHARL----QALAQA 291
Query: 502 P 502
P
Sbjct: 292 P 292
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 94 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 139
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 140 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 95 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 140
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 141 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 196
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 69 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 114
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 115 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 170
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 70 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 115
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 116 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 171
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 172 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 36/211 (17%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDAS-KSFAVECEVTRNIRHRNLVKV 267
IG G FG V Y+G VAVK + +DA+ ++F E V +RH NLV++
Sbjct: 20 IGKGEFGDVMLGDYRG------NKVAVKC---IKNDATAQAFLAEASVMTQLRHSNLVQL 70
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
GV + +V E+MA GSL +++ R + L L ++DV
Sbjct: 71 L----GVIVEEKGGLYIVTEYMAKGSLVDYL--------RSRGRSVLGGDCLLKFSLDVC 118
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ-TRSIGVEGTT 386
++YL + H DL N+L+ ++ A VSDFG+ + EA+ Q T + V+ T
Sbjct: 119 EAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVKWT- 172
Query: 387 GYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE S+ DV+SFGILL E+++
Sbjct: 173 ---APEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 94 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 139
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 140 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 92 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 137
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 138 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 122/301 (40%), Gaps = 39/301 (12%)
Query: 213 IGAGNFGSVYKG-----ILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKV 267
+G G FG V+ + + VAVK A + F E E+ ++H+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDK-----RHKAPGNLNSLKRLNI 322
F C+ +G +V+E+M +G L ++ + K APG L + L +
Sbjct: 86 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGV 382
A VA + YL H DL N L+ + + DFG++R + + D
Sbjct: 141 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 383 EGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNLNLRNCVKSALP 441
++ PE + + ++ DV+SFG++L E+FT G +P + N +C+
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL--SNTEAIDCITQG-- 253
Query: 442 ERAEEIRASSGSTQRXXXXXXXXXXXXXGVACSAEQPGERMKINDVEPRLRLIKKKLLEA 501
E RA C +P +R I DV RL + L +A
Sbjct: 254 RELERPRACPPEVYAIMR------------GCWQREPQQRHSIKDVHARL----QALAQA 297
Query: 502 P 502
P
Sbjct: 298 P 298
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 94 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 139
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 140 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 91 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 136
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 137 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 192
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 92 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 137
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 138 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDAS--KSFAVECEVTRNIRHRNLVKVF 268
++G G V+ VAVKV L D S F E + + H +V V+
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
+ +V E++ +L + +H TE G + + + + D
Sbjct: 79 DTGEA-ETPAGPLPYIVMEYVDGVTLRDIVH--TE--------GPMTPKRAIEVIADACQ 127
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFL-EAADEQTRSIGVEGTTG 387
L + H Q I H D+KP+NI++ V DFGIAR + ++ + T++ V GT
Sbjct: 128 ALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE G V + DVYS G +L E+ TG P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 99 FVKLYFC-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 144
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 145 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 201 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 23/225 (10%)
Query: 207 FSSENLIGAGNFGSVYKGIL---FESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHR 262
S + ++GAG FG V G L + +VA+K V + + + F E + H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N++++ GV + +V E+M NGSL+ ++ ++H A ++ + +
Sbjct: 107 NIIRL----EGVVTKSKPV-MIVTEYMENGSLDSFL-------RKHDA--QFTVIQLVGM 152
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+A +KYL H DL NIL++ + VSDFG++R LE E + G
Sbjct: 153 LRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + +PE + +S DV+S+GI+L E+ + G RP +M
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 76 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 121
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 122 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 177
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 23/225 (10%)
Query: 207 FSSENLIGAGNFGSVYKGIL---FESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHR 262
S + ++GAG FG V G L + +VA+K V + + + F E + H
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N++++ GV + +V E+M NGSL+ ++ ++H A ++ + +
Sbjct: 95 NIIRL----EGVVTKSKPV-MIVTEYMENGSLDSFL-------RKHDA--QFTVIQLVGM 140
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+A +KYL H DL NIL++ + VSDFG++R LE E + G
Sbjct: 141 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + +PE + +S DV+S+GI+L E+ + G RP +M
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 242
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 18/214 (8%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDAS--KSFAVECEVTRNIRHRNLVKVF 268
++G G V+ VAVKV L D S F E + + H +V V+
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
+ +V E++ +L + +H TE G + + + + D
Sbjct: 79 DTGEA-ETPAGPLPYIVMEYVDGVTLRDIVH--TE--------GPMTPKRAIEVIADACQ 127
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFL-EAADEQTRSIGVEGTTG 387
L + H Q I H D+KP+NIL+ V DFGIAR + ++ + ++ V GT
Sbjct: 128 ALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE G V + DVYS G +L E+ TG P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F +V ++ A+K+ +++ + E +V + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 91 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 136
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 137 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 192
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 23/225 (10%)
Query: 207 FSSENLIGAGNFGSVYKGIL---FESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHR 262
S + ++GAG FG V G L + +VA+K V + + + F E + H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N++++ GV + +V E+M NGSL+ ++ ++H A ++ + +
Sbjct: 78 NIIRL----EGVVTKSKPV-MIVTEYMENGSLDSFL-------RKHDA--QFTVIQLVGM 123
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+A +KYL H DL NIL++ + VSDFG++R LE E + G
Sbjct: 124 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + +PE + +S DV+S+GI+L E+ + G RP +M
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 225
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 40/227 (17%)
Query: 216 GNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEV--TRNIRHRNLVKVFTACSG 273
G FG V+K L VAVK+F + +S+ E E+ T ++H NL++ A
Sbjct: 26 GRFGCVWKAQLMNDF--VAVKIFPL---QDKQSWQSEREIFSTPGMKHENLLQFIAA--- 77
Query: 274 VDFQGNDFKA---LVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL-NIAIDVACV 329
+ +G++ + L+ F GSL +++ GN+ + L ++A ++
Sbjct: 78 -EKRGSNLEVELWLITAFHDKGSLTDYL------------KGNIITWNELCHVAETMSRG 124
Query: 330 LKYLHLDC--------QPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
L YLH D +P IAH D K N+LL ++TA ++DFG+A E + G
Sbjct: 125 LSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHG 184
Query: 382 VEGTTGYIAPEYGMG-----HEVSSYGDVYSFGILLLEMFTGLRPSD 423
GT Y+APE G + D+Y+ G++L E+ + + +D
Sbjct: 185 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 23/225 (10%)
Query: 207 FSSENLIGAGNFGSVYKGIL---FESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHR 262
S + ++GAG FG V G L + +VA+K V + + + F E + H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N++++ GV + +V E+M NGSL+ ++ ++H A ++ + +
Sbjct: 107 NIIRL----EGVVTKSKPV-MIVTEYMENGSLDSFL-------RKHDA--QFTVIQLVGM 152
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+A +KYL H DL NIL++ + VSDFG++R LE E + G
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + +PE + +S DV+S+GI+L E+ + G RP +M
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 23/225 (10%)
Query: 207 FSSENLIGAGNFGSVYKGIL---FESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHR 262
S + ++GAG FG V G L + +VA+K V + + + F E + H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N++++ GV + +V E+M NGSL+ ++ ++H A ++ + +
Sbjct: 107 NIIRL----EGVVTKSKPV-MIVTEYMENGSLDSFL-------RKHDA--QFTVIQLVGM 152
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+A +KYL H DL NIL++ + VSDFG++R LE E + G
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + +PE + +S DV+S+GI+L E+ + G RP +M
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 23/225 (10%)
Query: 207 FSSENLIGAGNFGSVYKGIL---FESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHR 262
S + ++GAG FG V G L + +VA+K V + + + F E + H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N++++ GV + +V E+M NGSL+ ++ ++H A ++ + +
Sbjct: 107 NIIRL----EGVVTKSKPV-MIVTEYMENGSLDSFL-------RKHDA--QFTVIQLVGM 152
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+A +KYL H DL NIL++ + VSDFG++R LE E + G
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + +PE + +S DV+S+GI+L E+ + G RP +M
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 13/217 (5%)
Query: 211 NLIGAGNFGSVYKGILFE---STTAVAVKVFNVLHHDASK--SFAVECEVTRNIRHRNLV 265
++G G FGSV +G L + ++ VAVK + + + F E ++ H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
++ C + QG ++ FM G L H + P ++ L +D
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDL----HTYLLYSRLETGPKHIPLQTLLKFMVD 155
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
+A ++YL H DL N +L D+MT V+DFG+++ + + D + +
Sbjct: 156 IALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
+IA E +S DV++FG+ + E+ T G+ P
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 31/227 (13%)
Query: 210 ENLIGAGNFGSVYKGILF---ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLV 265
E +IGAG FG V G L + VA+K + + + F E + H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 266 K---VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
V T + V ++ EFM NGSL+ ++ + G ++ + +
Sbjct: 72 HLEGVVTKSTPV--------MIITEFMENGSLDSFLR---------QNDGQFTVIQLVGM 114
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE---AADEQTRS 379
+A +KYL H L NIL++ + VSDFG++RFLE + T +
Sbjct: 115 LRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+G + + APE + +S DV+S+GI++ E+ + G RP DM
Sbjct: 172 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 218
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 23/225 (10%)
Query: 207 FSSENLIGAGNFGSVYKGIL---FESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHR 262
S + ++GAG FG V G L + +VA+K V + + + F E + H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N++++ GV + +V E+M NGSL+ ++ ++H A ++ + +
Sbjct: 107 NIIRL----EGVVTKSKPV-MIVTEYMENGSLDSFL-------RKHDA--QFTVIQLVGM 152
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+A +KYL H DL NIL++ + VSDFG++R LE E + G
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + +PE + +S DV+S+GI+L E+ + G RP +M
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 23/225 (10%)
Query: 207 FSSENLIGAGNFGSVYKGIL---FESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHR 262
S + ++GAG FG V G L + +VA+K V + + + F E + H
Sbjct: 45 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 104
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N++++ GV + +V E+M NGSL+ ++ ++H A ++ + +
Sbjct: 105 NIIRL----EGVVTKSKPV-MIVTEYMENGSLDSFL-------RKHDA--QFTVIQLVGM 150
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+A +KYL H DL NIL++ + VSDFG++R LE E + G
Sbjct: 151 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 207
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + +PE + +S DV+S+GI+L E+ + G RP +M
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 252
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 207 FSSENLIGAGNFGSVYKGIL---FESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHR 262
S + ++GAG FG V G L + +VA+K V + + + F E + H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N++++ GV + +V E+M NGSL+ ++ ++H A ++ + +
Sbjct: 107 NIIRL----EGVVTKSKPV-MIVTEYMENGSLDSFL-------RKHDA--QFTVIQLVGM 152
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+A +KYL H DL NIL++ + VSDFG+ R LE E + G
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + +PE + +S DV+S+GI+L E+ + G RP +M
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDAS--KSFAVECEVTRNIRHRNLVKVF 268
++G G V+ VAVKV L D S F E + + H +V V+
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 95
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
+ +V E++ +L + +H TE G + + + + D
Sbjct: 96 DTGEA-ETPAGPLPYIVMEYVDGVTLRDIVH--TE--------GPMTPKRAIEVIADACQ 144
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFL-EAADEQTRSIGVEGTTG 387
L + H Q I H D+KP+NI++ V DFGIAR + ++ + T++ V GT
Sbjct: 145 ALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 201
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE G V + DVYS G +L E+ TG P
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+F + ++ A+K+ +++ + E +V + H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VK++ FQ ++ + NG L +++ I D+ + R A
Sbjct: 92 FVKLY-----FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---------TCTRFYTA 137
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L+YLH I H DLKP NILL+++M ++DFG A+ L +Q R+
Sbjct: 138 -EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y++PE D+++ G ++ ++ GL P
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 213 IGAGNFGSVYK----GIL-FESTTAVAVKVFNV-LHHDASKSFAVECEVTRNIRHRNLVK 266
IG G FG V++ G+L +E T VAVK+ D F E + + N+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWM------------HPITEEDKRHKAPGN- 313
+ C+ G L++E+MA G L E++ H R +PG
Sbjct: 115 LLGVCA----VGKPM-CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 314 -LNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEA 372
L+ ++L IA VA + YL + H DL N L+ + M ++DFG++R + +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 373 ADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDMFKDNL 430
AD ++ PE + ++ DV+++G++L E+F+ GL+P M + +
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 285
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 90/214 (42%), Gaps = 34/214 (15%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVK-VFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTAC 271
IG GNFG V+ G L T VAVK L D F E + + H N+V++ C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
+ K +Y M +++ + E R L L + D A ++
Sbjct: 182 TQ--------KQPIYIVMELVQGGDFLTFLRTEGAR------LRVKTLLQMVGDAAAGME 227
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG---- 387
YL C H DL N L+ ++ +SDFG++R E AD GV +G
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR--EEAD------GVXAASGGLRQ 276
Query: 388 ----YIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE SS DV+SFGILL E F+
Sbjct: 277 VPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTRNIRH 261
F ++G G+FG V+ + A + VL K +E ++ + H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSL-----EEWMHPITEEDKRHKAPGNLNS 316
+VK+ A FQ L+ +F+ G L +E M TEED +
Sbjct: 86 PFIVKLHYA-----FQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKF-------Y 131
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
L L +A+D +LH I + DLKP NILLD+E ++DFG+++ E+ D +
Sbjct: 132 LAELALALD------HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHE 180
Query: 377 TRSIGVEGTTGYIAPEY--GMGHEVSSYGDVYSFGILLLEMFTGLRP 421
++ GT Y+APE GH S+ D +SFG+L+ EM TG P
Sbjct: 181 KKAYSFCGTVEYMAPEVVNRRGHTQSA--DWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTRNIRH 261
F ++G G+FG V+ + A + VL K +E ++ + H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSL-----EEWMHPITEEDKRHKAPGNLNS 316
+VK+ A FQ L+ +F+ G L +E M TEED +
Sbjct: 87 PFIVKLHYA-----FQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKF-------Y 132
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
L L +A+D +LH I + DLKP NILLD+E ++DFG+++ E+ D +
Sbjct: 133 LAELALALD------HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHE 181
Query: 377 TRSIGVEGTTGYIAPEY--GMGHEVSSYGDVYSFGILLLEMFTGLRP 421
++ GT Y+APE GH S+ D +SFG+L+ EM TG P
Sbjct: 182 KKAYSFCGTVEYMAPEVVNRRGHTQSA--DWWSFGVLMFEMLTGTLP 226
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 23/222 (10%)
Query: 210 ENLIGAGNFGSVYKGILF---ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLV 265
E +IG+G+ G V G L + VA+K + + + F E + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
++ GV +G +V E+M NGSL+ ++ + H G ++ + +
Sbjct: 114 RL----EGVVTRGR-LAMIVTEYMENGSLDTFL-------RTHD--GQFTIMQLVGMLRG 159
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE-AADEQTRSIGVEG 384
V ++YL H DL N+L+D + VSDFG++R LE D + G +
Sbjct: 160 VGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI 216
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE SS DV+SFG+++ E+ G RP +M
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTRNIRH 261
F ++G G+FG V+ + A + VL K +E ++ + H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSL-----EEWMHPITEEDKRHKAPGNLNS 316
+VK+ A FQ L+ +F+ G L +E M TEED +
Sbjct: 86 PFIVKLHYA-----FQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKF-------Y 131
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
L L +A+D +LH I + DLKP NILLD+E ++DFG+++ E+ D +
Sbjct: 132 LAELALALD------HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHE 180
Query: 377 TRSIGVEGTTGYIAPEY--GMGHEVSSYGDVYSFGILLLEMFTGLRP 421
++ GT Y+APE GH S+ D +SFG+L+ EM TG P
Sbjct: 181 KKAYSFCGTVEYMAPEVVNRRGHTQSA--DWWSFGVLMFEMLTGTLP 225
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 207 FSSENLIGAGNFGSVYKGIL---FESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHR 262
S + ++GAG FG V G L + +VA+K V + + + F E + H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N++++ GV + +V E M NGSL+ ++ ++H A ++ + +
Sbjct: 78 NIIRL----EGVVTKSKPV-MIVTEXMENGSLDSFL-------RKHDA--QFTVIQLVGM 123
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+A +KYL H DL NIL++ + VSDFG++R LE E + G
Sbjct: 124 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + +PE + +S DV+S+GI+L E+ + G RP +M
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 225
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+GAG FG V+ G + ++T VAVK + ++F E + + ++H LV+++ +
Sbjct: 21 LGAGQFGEVWMG-YYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ ++ E+MA GSL +++ + G + K ++ + +A + Y
Sbjct: 79 R-----EEPIYIITEYMAKGSLLDFL--------KSDEGGKVLLPKLIDFSAQIAEGMAY 125
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +N+L+ + + ++DFG+AR +E +E T G + + APE
Sbjct: 126 IE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPE 181
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFT 417
+ DV+SFGILL E+ T
Sbjct: 182 AINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 207 FSSENLIGAGNFGSVYKGIL---FESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHR 262
S + ++GAG FG V G L + +VA+K V + + + F E + H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N++++ GV + +V E M NGSL+ ++ ++H A ++ + +
Sbjct: 107 NIIRL----EGVVTKSKPV-MIVTEXMENGSLDSFL-------RKHDA--QFTVIQLVGM 152
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+A +KYL H DL NIL++ + VSDFG++R LE E + G
Sbjct: 153 LRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + +PE + +S DV+S+GI+L E+ + G RP +M
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 90/214 (42%), Gaps = 34/214 (15%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVK-VFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTAC 271
IG GNFG V+ G L T VAVK L D F E + + H N+V++ C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
+ K +Y M +++ + E R L L + D A ++
Sbjct: 182 TQ--------KQPIYIVMELVQGGDFLTFLRTEGAR------LRVKTLLQMVGDAAAGME 227
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG---- 387
YL C H DL N L+ ++ +SDFG++R E AD GV +G
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR--EEAD------GVYAASGGLRQ 276
Query: 388 ----YIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE SS DV+SFGILL E F+
Sbjct: 277 VPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 207 FSSENLIGAGNFGSVYKGIL---FESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHR 262
S + ++GAG FG V G L + +VA+K V + + + F E + H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N++++ GV + +V E M NGSL+ ++ ++H A ++ + +
Sbjct: 107 NIIRL----EGVVTKSKPV-MIVTEXMENGSLDSFL-------RKHDA--QFTVIQLVGM 152
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-G 381
+A +KYL H DL NIL++ + VSDFG++R LE E + G
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ + +PE + +S DV+S+GI+L E+ + G RP +M
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 23/222 (10%)
Query: 210 ENLIGAGNFGSVYKGILF---ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLV 265
E +IGAG FG V G L + VA+K V + + + F E + H N++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ GV + +V E+M NGSL+ ++ K G ++ + +
Sbjct: 87 HL----EGVVTKSKPV-MIVTEYMENGSLDTFLK---------KNDGQFTVIQLVGMLRG 132
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI-GVEG 384
++ +KYL H DL NIL++ + VSDFG++R LE E + G +
Sbjct: 133 ISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 189
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE + +S DV+S+GI++ E+ + G RP +M
Sbjct: 190 PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEM 231
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 104/205 (50%), Gaps = 19/205 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+GAG FG V+ G + ++T VAVK + ++F E + + ++H LV+++ +
Sbjct: 20 LGAGQFGEVWMG-YYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ ++ EFMA GSL +++ ++E + P K ++ + +A + Y
Sbjct: 78 K-----EEPIYIITEFMAKGSLLDFLK--SDEGGKVLLP------KLIDFSAQIAEGMAY 124
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
+ + H DL+ +N+L+ + + ++DFG+AR +E +E T G + + APE
Sbjct: 125 IE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPE 180
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFT 417
+ +V+SFGILL E+ T
Sbjct: 181 AINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 101/233 (43%), Gaps = 31/233 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRN 263
F NL+G G+F VY+ + VA+K+ + + + E ++ ++H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH----PITEEDKRHKAPGNLNSLKR 319
+++++ F+ +++ LV E NG + ++ P +E + RH
Sbjct: 73 ILELYNY-----FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARH----------- 116
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
+ + YLH I H DL SN+LL M ++DFG+A L+ E+ +
Sbjct: 117 --FMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT 171
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSD-DMFKDNLN 431
+ GT YI+PE DV+S G + + G P D D K+ LN
Sbjct: 172 LC--GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN 222
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 210 ENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFT 269
E +GAG FG V+ + T VAVK ++F E V + ++H LVK+
Sbjct: 187 EKKLGAGQFGEVWMAT-YNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHA 244
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
+ + ++ EFMA GSL +++ ++E + P K ++ + +A
Sbjct: 245 VVT------KEPIYIITEFMAKGSLLDFLK--SDEGSKQPLP------KLIDFSAQIAEG 290
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
+ ++ Q H DL+ +NIL+ + ++DFG+AR +G + +
Sbjct: 291 MAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLAR-----------VGAKFPIKWT 336
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFT 417
APE + DV+SFGILL+E+ T
Sbjct: 337 APEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 23/222 (10%)
Query: 210 ENLIGAGNFGSVYKGILF---ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLV 265
E +IG+G+ G V G L + VA+K + + + F E + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
++ GV +G +V E+M NGSL+ ++ + H G ++ + +
Sbjct: 114 RL----EGVVTRGR-LAMIVTEYMENGSLDTFL-------RTHD--GQFTIMQLVGMLRG 159
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE-AADEQTRSIGVEG 384
V ++YL H DL N+L+D + VSDFG++R LE D + G +
Sbjct: 160 VGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI 216
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE SS DV+SFG+++ E+ G RP +M
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 216 GNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTR--NIRHRNLVKVFTACSG 273
G FG V+K L VAVK+F + +S+ E EV ++H N+++ G
Sbjct: 35 GRFGCVWKAQLLNEY--VAVKIFPI---QDKQSWQNEYEVYSLPGMKHENILQFI----G 85
Query: 274 VDFQGNDFKA---LVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL-NIAIDVACV 329
+ +G L+ F GSL +++ N+ S L +IA +A
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFL------------KANVVSWNELCHIAETMARG 133
Query: 330 LKYLHLDC-------QPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGV 382
L YLH D +P I+H D+K N+LL + +TA ++DFG+A EA + G
Sbjct: 134 LAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ 193
Query: 383 EGTTGYIAPEYGMG-----HEVSSYGDVYSFGILLLEMFTGLRPSD 423
GT Y+APE G + D+Y+ G++L E+ + +D
Sbjct: 194 VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 19/218 (8%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFA---VECEVTRNIRHRN 263
F ++G G FG V+ + + A K N K + VE ++ + R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
+V + A F+ LV M G + ++ + E++ + P + +
Sbjct: 247 IVSLAYA-----FETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP------RAIFYT 295
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ L++LH Q I + DLKP N+LLDD+ +SD G+A L+A QT++ G
Sbjct: 296 AQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYA 350
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT G++APE +G E D ++ G+ L EM P
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 28/230 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVK-VFNVLHHDASKSFAVECEVT--RNIRHRNLVKVFT 269
+G G+FG V +++ VA+K + L + VE E++ + +RH +++K++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
+ D +V E+ A G L ++ I E+ + + G + C
Sbjct: 77 VIT----TPTDI-VMVIEY-AGGELFDY---IVEKKRMTEDEGR-------RFFQQIICA 120
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
++Y H + I H DLKP N+LLDD + ++DFG++ + + S G+ Y
Sbjct: 121 IEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYA 174
Query: 390 APEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSDDMFKDNL--NLRNCV 436
APE G + DV+S GI+L M G P DD F NL + +CV
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV 224
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFA---VECEVTRNIRHRNLVKV 267
++G G FG V+ + + A K N K + VE ++ + R +V +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
A F+ LV M G + ++ + E++ + P + + +
Sbjct: 251 AYA-----FETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP------RAIFYTAQIV 299
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
L++LH Q I + DLKP N+LLDD+ +SD G+A L+A QT++ G GT G
Sbjct: 300 SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPG 354
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
++APE +G E D ++ G+ L EM P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFA---VECEVTRNIRHRNLVKV 267
++G G FG V+ + + A K N K + VE ++ + R +V +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
A F+ LV M G + ++ + E++ + P + + +
Sbjct: 251 AYA-----FETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP------RAIFYTAQIV 299
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
L++LH Q I + DLKP N+LLDD+ +SD G+A L+A QT++ G GT G
Sbjct: 300 SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPG 354
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
++APE +G E D ++ G+ L EM P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFA---VECEVTRNIRHRNLVKV 267
++G G FG V+ + + A K N K + VE ++ + R +V +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
A F+ LV M G + ++ + E++ + P + + +
Sbjct: 251 AYA-----FETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP------RAIFYTAQIV 299
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
L++LH Q I + DLKP N+LLDD+ +SD G+A L+A QT++ G GT G
Sbjct: 300 SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPG 354
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
++APE +G E D ++ G+ L EM P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 108/252 (42%), Gaps = 33/252 (13%)
Query: 187 TPSISFPYVSYRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS 246
+P+ S + L + F L+G G +G VYKG ++ A+KV +V D
Sbjct: 6 SPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEE 64
Query: 247 KSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFK-ALVYEFMANGSLEEWMHPITEE 304
+ E + + HRN+ + A + G D + LV EF GS +T+
Sbjct: 65 EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGS-------VTDL 117
Query: 305 DKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDF 364
K K N+LK IA +L+ L Q + H D+K N+LL + + DF
Sbjct: 118 IKNTKG----NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDF 173
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEV--------SSY---GDVYSFGILLL 413
G++ L+ R++G T +I Y M EV ++Y D++S GI +
Sbjct: 174 GVSAQLD------RTVGRRNT--FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAI 225
Query: 414 EMFTGLRPSDDM 425
EM G P DM
Sbjct: 226 EMAEGAPPLCDM 237
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 29/216 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKS---FAVECEVTRNIRHRNLVKVFT 269
+G+G FG V G ++ VAVK+ + S S F E + + H LVK +
Sbjct: 16 LGSGQFGVVKLGK-WKGQYDVAVKMIK----EGSMSEDEFFQEAQTMMKLSHPKLVKFYG 70
Query: 270 ACSGVDFQGNDFKA-LVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
CS ++ +V E+++NG L ++ R G L + L + DV
Sbjct: 71 VCS------KEYPIYIVTEYISNGCLLNYL--------RSHGKG-LEPSQLLEMCYDVCE 115
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+ +L H DL N L+D ++ VSDFG+ R++ D+ S+G + +
Sbjct: 116 GMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVKW 171
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
APE + SS DV++FGIL+ E+F+ G P D
Sbjct: 172 SAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS-KSFAVECEVTRNIRHRNLV 265
+ + +IG+G V VA+K N+ S E + H N+V
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+T+ F D LV + ++ GS+ + + I + + HK+ G L+ I +
Sbjct: 77 SYYTS-----FVVKDELWLVMKLLSGGSVLDIIKHIVAKGE-HKS-GVLDESTIATILRE 129
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE-- 383
V L+YLH + Q H D+K NILL ++ + ++DFG++ FL + TR+ +
Sbjct: 130 VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 384 -GTTGYIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
GT ++APE + +V Y D++SFGI +E+ TG P
Sbjct: 187 VGTPCWMAPE--VMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 35/225 (15%)
Query: 207 FSSENLIGAGNFGSVY---KGILFESTTAVAVKVFN--VLHHDASKSFAVECEVTRNIRH 261
F ++G G+FG V+ K +S A+KV L +E ++ ++ H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSL-----EEWMHPITEEDKRHKAPGNLNS 316
+VK+ A FQ L+ +F+ G L +E M TEED +
Sbjct: 90 PFVVKLHYA-----FQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKF-------- 134
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
++A L +LH I + DLKP NILLD+E ++DFG+++ EA D +
Sbjct: 135 -----YLAELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHE 184
Query: 377 TRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
++ GT Y+APE S D +S+G+L+ EM TG P
Sbjct: 185 KKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 96 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 142
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI----GVE 383
+KYL H DL N +LD++ T V+DFG+AR + D++ S+ G +
Sbjct: 143 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEXXSVHNKTGAK 197
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 240
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F+ IG G+FG V+KGI + VA+K+ + L + ++ E+T
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID-LEEAEDEIEDIQQEIT---------- 72
Query: 267 VFTACSG---VDFQGNDFK----ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
V + C + G+ K ++ E++ GS + + PG L+ +
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-----------PGPLDETQI 121
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
I ++ L YLH + + H D+K +N+LL + ++DFG+A L D Q +
Sbjct: 122 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKR 176
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDM 425
GT ++APE S D++S GI +E+ G P ++
Sbjct: 177 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS-KSFAVECEVTRNIRHRNLV 265
+ + +IG+G V VA+K N+ S E + H N+V
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+T+ F D LV + ++ GS+ + + I + + HK+ G L+ I +
Sbjct: 72 SYYTS-----FVVKDELWLVMKLLSGGSVLDIIKHIVAKGE-HKS-GVLDESTIATILRE 124
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE-- 383
V L+YLH + Q H D+K NILL ++ + ++DFG++ FL + TR+ +
Sbjct: 125 VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 384 -GTTGYIAPEYGMGHEVSSY---GDVYSFGILLLEMFTGLRP 421
GT ++APE + +V Y D++SFGI +E+ TG P
Sbjct: 182 VGTPCWMAPE--VMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F+ IG G+FG V+KGI + VA+K+ + L + ++ E+T
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID-LEEAEDEIEDIQQEIT---------- 57
Query: 267 VFTACSG---VDFQGNDFK----ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
V + C + G+ K ++ E++ GS + + PG L+ +
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-----------PGPLDETQI 106
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
I ++ L YLH + + H D+K +N+LL + ++DFG+A L D Q +
Sbjct: 107 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKR 161
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDM 425
GT ++APE S D++S GI +E+ G P ++
Sbjct: 162 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F+ IG G+FG V+KGI + VA+K+ + L + ++ E+T
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID-LEEAEDEIEDIQQEIT---------- 57
Query: 267 VFTACSG---VDFQGNDFK----ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
V + C + G+ K ++ E++ GS + + PG L+ +
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-----------PGPLDETQI 106
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
I ++ L YLH + + H D+K +N+LL + ++DFG+A L D Q +
Sbjct: 107 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKR 161
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDM 425
GT ++APE S D++S GI +E+ G P ++
Sbjct: 162 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F+ + IG G+FG VYKGI + VA+K+ + L + ++ E+T
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIID-LEEAEDEIEDIQQEIT---------- 69
Query: 267 VFTACSG---VDFQGNDFKA----LVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
V + C + G+ K+ ++ E++ GS + + PG L
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL-----------KPGPLEETYI 118
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
I ++ L YLH + + H D+K +N+LL ++ ++DFG+A L D Q +
Sbjct: 119 ATILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKR 173
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDM 425
GT ++APE D++S GI +E+ G P+ D+
Sbjct: 174 NXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 116 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 162
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI----GVE 383
+KYL H DL N +LD++ T V+DFG+AR + D++ S+ G +
Sbjct: 163 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAK 217
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 218 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 260
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 115 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 161
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI----GVE 383
+KYL H DL N +LD++ T V+DFG+AR + D++ S+ G +
Sbjct: 162 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAK 216
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 217 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 259
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 108/260 (41%), Gaps = 25/260 (9%)
Query: 183 RGNPTPSISFPYVSYR--MLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVA---VKV 237
+G P P P + R M YN F E IG G F VY+ VA V++
Sbjct: 9 QGPPVPQFQ-PQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQI 67
Query: 238 FNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW 297
F+++ A E ++ + + H N++K + + F ++ +V E G L
Sbjct: 68 FDLMDAKARADCIKEIDLLKQLNHPNVIKYYAS-----FIEDNELNIVLELADAGDLSRM 122
Query: 298 MHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEM 357
+ ++ + + + + L+++H + H D+KP+N+ +
Sbjct: 123 IKHFKKQKRL------IPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATG 173
Query: 358 TAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ D G+ RF + + T + + GT Y++PE + + D++S G LL EM
Sbjct: 174 VVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 231
Query: 418 GLRPSDDMFKDNLNLRNCVK 437
P + D +NL + K
Sbjct: 232 LQSP---FYGDKMNLYSLCK 248
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 35/226 (15%)
Query: 213 IGAGNFGSVYKGILFES----------TTAVAVKVFNVLHHDASK----SFAVECEVTRN 258
+G G FG V +L E+ T VAVK+ L DA++ E E+ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKM---LKSDATEKDLSDLISEMEMMKM 89
Query: 259 I-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH---PITEE---DKRHKAP 311
I +H+N++ + AC+ Q +V E+ + G+L E++ P E + H
Sbjct: 90 IGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEFSFNPSHNPE 144
Query: 312 GNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE 371
L+S ++ A VA ++YL H DL N+L+ ++ ++DFG+AR +
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 372 AADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
D ++ ++APE + DV+SFG+LL E+FT
Sbjct: 202 HIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 89 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 135
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI----GVE 383
+KYL H DL N +LD++ T V+DFG+AR + D++ S+ G +
Sbjct: 136 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAK 190
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 191 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 233
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F+ IG G+FG V+KGI + VA+K+ + L + ++ E+T
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID-LEEAEDEIEDIQQEIT---------- 77
Query: 267 VFTACSG---VDFQGNDFK----ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
V + C + G+ K ++ E++ GS + + PG L+ +
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-----------PGPLDETQI 126
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
I ++ L YLH + + H D+K +N+LL + ++DFG+A L D Q +
Sbjct: 127 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKR 181
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDM 425
GT ++APE S D++S GI +E+ G P ++
Sbjct: 182 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 97 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 143
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI----GVE 383
+KYL H DL N +LD++ T V+DFG+AR + D++ S+ G +
Sbjct: 144 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAK 198
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 241
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY--- 70
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +A V+
Sbjct: 71 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL-----MAGVV- 118
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F+ IG G+FG V+KGI + VA+K+ + L + ++ E+T
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIID-LEEAEDEIEDIQQEIT---------- 73
Query: 267 VFTACSG---VDFQGNDFKA----LVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
V + C + G+ K ++ E++ GS + + G + +
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA-----------GPFDEFQI 122
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
+ ++ L YLH + + H D+K +N+LL ++ ++DFG+A L D Q +
Sbjct: 123 ATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKR 177
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDM 425
GT ++APE S D++S GI +E+ G P+ DM
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY--- 71
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +A V+
Sbjct: 72 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL-----MAGVV- 119
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 94 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 140
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI----GVE 383
+KYL H DL N +LD++ T V+DFG+AR + D++ S+ G +
Sbjct: 141 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAK 195
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 196 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 238
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 95 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 141
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI----GVE 383
+KYL H DL N +LD++ T V+DFG+AR + D++ S+ G +
Sbjct: 142 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAK 196
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 239
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 97 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 143
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI----GVE 383
+KYL H DL N +LD++ T V+DFG+AR + D++ S+ G +
Sbjct: 144 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAK 198
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 241
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 96 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 142
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI----GVE 383
+KYL H DL N +LD++ T V+DFG+AR + D++ S+ G +
Sbjct: 143 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAK 197
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 240
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAP 311
E E+ RN+ H N+VK C+ + GN K L+ EF+ +GSL+E++ K
Sbjct: 61 EIEILRNLYHENIVKYKGICT--EDGGNGIK-LIMEFLPSGSLKEYLP---------KNK 108
Query: 312 GNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE 371
+N ++L A+ + + YL H DL N+L++ E + DFG+ + +E
Sbjct: 109 NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 165
Query: 372 AADE-QTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
E T + + APE M + DV+SFG+ L E+ T
Sbjct: 166 TDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAP 311
E E+ RN+ H N+VK C+ + GN K L+ EF+ +GSL+E++ K
Sbjct: 73 EIEILRNLYHENIVKYKGICT--EDGGNGIK-LIMEFLPSGSLKEYLP---------KNK 120
Query: 312 GNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE 371
+N ++L A+ + + YL H DL N+L++ E + DFG+ + +E
Sbjct: 121 NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177
Query: 372 AADE-QTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
E T + + APE M + DV+SFG+ L E+ T
Sbjct: 178 TDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 92 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 138
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI----GVE 383
+KYL H DL N +LD++ T V+DFG+AR + D++ S+ G +
Sbjct: 139 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAK 193
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 194 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 236
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 35/226 (15%)
Query: 213 IGAGNFGSVYKGILFES----------TTAVAVKVFNVLHHDASK----SFAVECEVTRN 258
+G G FG V +L E+ T VAVK+ L DA++ E E+ +
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKM---LKSDATEKDLSDLISEMEMMKM 130
Query: 259 I-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH----PITEE--DKRHKAP 311
I +H+N++ + AC+ Q +V E+ + G+L E++ P E + H
Sbjct: 131 IGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPE 185
Query: 312 GNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE 371
L+S ++ A VA ++YL H DL N+L+ ++ ++DFG+AR +
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 242
Query: 372 AADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
D ++ ++APE + DV+SFG+LL E+FT
Sbjct: 243 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 35/226 (15%)
Query: 213 IGAGNFGSVYKGILFES----------TTAVAVKVFNVLHHDASK----SFAVECEVTRN 258
+G G FG V +L E+ T VAVK+ L DA++ E E+ +
Sbjct: 25 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKM---LKSDATEKDLSDLISEMEMMKM 78
Query: 259 I-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH----PITEE--DKRHKAP 311
I +H+N++ + AC+ Q +V E+ + G+L E++ P E + H
Sbjct: 79 IGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPE 133
Query: 312 GNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE 371
L+S ++ A VA ++YL H DL N+L+ ++ ++DFG+AR +
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 190
Query: 372 AADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
D ++ ++APE + DV+SFG+LL E+FT
Sbjct: 191 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 53/262 (20%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEV--TRNIRHRNLVKVFTA 270
+G G +G V++G+ + VAVK+F+ +S+ E E+ T +RH N++ F A
Sbjct: 16 VGKGRYGEVWRGLWHGES--VAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILG-FIA 69
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ L+ + +GSL +++ T E H A L +A+ AC L
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP--HLA---------LRLAVSAACGL 118
Query: 331 KYLHLDC-----QPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE-- 383
+LH++ +P IAH D K N+L+ + ++D G+A + + IG
Sbjct: 119 AHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPR 177
Query: 384 -GTTGYIAPEYGMGHEVSS-------YGDVYSFGILLLEM----------------FTGL 419
GT Y+APE + ++ + + D+++FG++L E+ F +
Sbjct: 178 VGTKRYMAPEV-LDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDV 236
Query: 420 RPSDDMFKDNLNLRNCVKSALP 441
P+D F+D + CV P
Sbjct: 237 VPNDPSFED-MKKVVCVDQQTP 257
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 24/221 (10%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEV-TRNIR 260
+ F ++G G+FG V+ ++ A+K VL D + VE V +
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 77
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H L +F C+ FQ + V E++ G L M+ I K +
Sbjct: 78 HPFLTHMF--CT---FQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATF------ 123
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
A ++ L++LH I + DLK NILLD + ++DFG+ + D +T
Sbjct: 124 -YAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEF 179
Query: 381 GVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT YIAPE +G + + D +SFG+LL EM G P
Sbjct: 180 C--GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 19/220 (8%)
Query: 202 NATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIR 260
+++ F +G G + +VYKG+ + VA+K + + + S A+ E + + ++
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+V+++ + LV+EFM N L+++M D R GN L
Sbjct: 62 HENIVRLYDV-----IHTENKLTLVFEFMDN-DLKKYM------DSR--TVGNTPRGLEL 107
Query: 321 NIAIDVAC-VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
N+ +L+ L + I H DLKP N+L++ + DFG+AR S
Sbjct: 108 NLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS 167
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYG-DVYSFGILLLEMFTG 418
V T Y AP+ MG S D++S G +L EM TG
Sbjct: 168 EVV--TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG 205
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 35/226 (15%)
Query: 213 IGAGNFGSVYKGILFES----------TTAVAVKVFNVLHHDASK----SFAVECEVTRN 258
+G G FG V +L E+ T VAVK+ L DA++ E E+ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKM---LKSDATEKDLSDLISEMEMMKM 89
Query: 259 I-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH----PITEE--DKRHKAP 311
I +H+N++ + AC+ Q +V E+ + G+L E++ P E + H
Sbjct: 90 IGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPE 144
Query: 312 GNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE 371
L+S ++ A VA ++YL H DL N+L+ ++ ++DFG+AR +
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 372 AADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
D ++ ++APE + DV+SFG+LL E+FT
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 35/226 (15%)
Query: 213 IGAGNFGSVYKGILFES----------TTAVAVKVFNVLHHDASK----SFAVECEVTRN 258
+G G FG V +L E+ T VAVK+ L DA++ E E+ +
Sbjct: 28 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKM---LKSDATEKDLSDLISEMEMMKM 81
Query: 259 I-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH----PITEE--DKRHKAP 311
I +H+N++ + AC+ Q +V E+ + G+L E++ P E + H
Sbjct: 82 IGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPE 136
Query: 312 GNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE 371
L+S ++ A VA ++YL H DL N+L+ ++ ++DFG+AR +
Sbjct: 137 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 193
Query: 372 AADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
D ++ ++APE + DV+SFG+LL E+FT
Sbjct: 194 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 35/226 (15%)
Query: 213 IGAGNFGSVYKGILFES----------TTAVAVKVFNVLHHDASK----SFAVECEVTRN 258
+G G FG V +L E+ T VAVK+ L DA++ E E+ +
Sbjct: 21 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKM---LKSDATEKDLSDLISEMEMMKM 74
Query: 259 I-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH----PITEE--DKRHKAP 311
I +H+N++ + AC+ Q +V E+ + G+L E++ P E + H
Sbjct: 75 IGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPE 129
Query: 312 GNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE 371
L+S ++ A VA ++YL H DL N+L+ ++ ++DFG+AR +
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 186
Query: 372 AADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
D ++ ++APE + DV+SFG+LL E+FT
Sbjct: 187 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK D + F E ++ + + +VK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 73
Query: 269 TACSGVDF-QGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
GV + G LV E++ +G L +++ +RH+A L++ + L + +
Sbjct: 74 ---RGVSYGPGRPELRLVMEYLPSGCLRDFL-------QRHRA--RLDASRLLLYSSQIC 121
Query: 328 CVLKYL-HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT 386
++YL C H DL NIL++ E ++DFG+A+ L D+ + G +
Sbjct: 122 KGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDXXVVREPGQS 176
Query: 387 G--YIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE + S DV+SFG++L E+FT
Sbjct: 177 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 35/226 (15%)
Query: 213 IGAGNFGSVYKGILFES----------TTAVAVKVFNVLHHDASK----SFAVECEVTRN 258
+G G FG V +L E+ T VAVK+ L DA++ E E+ +
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKM---LKSDATEKDLSDLISEMEMMKM 82
Query: 259 I-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH----PITEE--DKRHKAP 311
I +H+N++ + AC+ Q +V E+ + G+L E++ P E + H
Sbjct: 83 IGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPE 137
Query: 312 GNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE 371
L+S ++ A VA ++YL H DL N+L+ ++ ++DFG+AR +
Sbjct: 138 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 194
Query: 372 AADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
D ++ ++APE + DV+SFG+LL E+FT
Sbjct: 195 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 35/226 (15%)
Query: 213 IGAGNFGSVYKGILFES----------TTAVAVKVFNVLHHDASK----SFAVECEVTRN 258
+G G FG V +L E+ T VAVK+ L DA++ E E+ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKM---LKSDATEKDLSDLISEMEMMKM 89
Query: 259 I-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH----PITEE--DKRHKAP 311
I +H+N++ + AC+ Q +V E+ + G+L E++ P E + H
Sbjct: 90 IGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPE 144
Query: 312 GNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE 371
L+S ++ A VA ++YL H DL N+L+ ++ ++DFG+AR +
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 372 AADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
D ++ ++APE + DV+SFG+LL E+FT
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 41/251 (16%)
Query: 183 RGNPTPSISFPYVSYRMLYNATKGFSSENLIGAGNFGSVYKGILFES---TTAVAVKVFN 239
+ NP P+I +P + + +++IG GNFG V K + + A ++
Sbjct: 1 KNNPDPTI-YPVLDW-------NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE 52
Query: 240 VLHHDASKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM 298
D + FA E EV + H N++ + AC + + L E+ +G+L +++
Sbjct: 53 YASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFL 107
Query: 299 HP--ITEEDKR----HKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNIL 352
+ E D + L+S + L+ A DVA + YL Q H DL NIL
Sbjct: 108 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNIL 164
Query: 353 LDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSY------GDVY 406
+ + A ++DFG++R E + V+ T G + P M E +Y DV+
Sbjct: 165 VGENYVAKIADFGLSRGQE--------VYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVW 215
Query: 407 SFGILLLEMFT 417
S+G+LL E+ +
Sbjct: 216 SYGVLLWEIVS 226
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 35/226 (15%)
Query: 213 IGAGNFGSVYKGILFES----------TTAVAVKVFNVLHHDASK----SFAVECEVTRN 258
+G G FG V +L E+ T VAVK+ L DA++ E E+ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKM---LKSDATEKDLSDLISEMEMMKM 89
Query: 259 I-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH----PITEE--DKRHKAP 311
I +H+N++ + AC+ Q +V E+ + G+L E++ P E + H
Sbjct: 90 IGKHKNIINLLGACT----QDGPLYVIV-EYASKGNLREYLQAREPPGLEYSYNPSHNPE 144
Query: 312 GNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE 371
L+S ++ A VA ++YL H DL N+L+ ++ ++DFG+AR +
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 372 AADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
D ++ ++APE + DV+SFG+LL E+FT
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 41/251 (16%)
Query: 183 RGNPTPSISFPYVSYRMLYNATKGFSSENLIGAGNFGSVYKGILFES---TTAVAVKVFN 239
+ NP P+I +P + + +++IG GNFG V K + + A ++
Sbjct: 11 KNNPDPTI-YPVLDW-------NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE 62
Query: 240 VLHHDASKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM 298
D + FA E EV + H N++ + AC + + L E+ +G+L +++
Sbjct: 63 YASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFL 117
Query: 299 HP--ITEEDKR----HKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNIL 352
+ E D + L+S + L+ A DVA + YL Q H DL NIL
Sbjct: 118 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNIL 174
Query: 353 LDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSY------GDVY 406
+ + A ++DFG++R E + V+ T G + P M E +Y DV+
Sbjct: 175 VGENYVAKIADFGLSRGQE--------VYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVW 225
Query: 407 SFGILLLEMFT 417
S+G+LL E+ +
Sbjct: 226 SYGVLLWEIVS 236
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 26/255 (10%)
Query: 176 RLMCMKKRGNP-TPSISFPYVSYRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVA 234
RL+ ++ P TPS P + + T+ F ++G+G FG+VYKG+ V
Sbjct: 20 RLLQERELVEPLTPSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVK 78
Query: 235 VKVFNVLHHDAS-----KSFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFM 289
+ V + +A+ K E V ++ + ++ ++ C Q L+ + M
Sbjct: 79 IPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLM 132
Query: 290 ANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPS 349
G L +++ + HK N+ S LN + +A + YL + H DL
Sbjct: 133 PFGCLLDYV-------REHK--DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAAR 180
Query: 350 NILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFG 409
N+L+ ++DFG+A+ L A +++ + G + ++A E + + DV+S+G
Sbjct: 181 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 240
Query: 410 ILLLEMFT-GLRPSD 423
+ + E+ T G +P D
Sbjct: 241 VTVWELMTFGSKPYD 255
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 33/235 (14%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTAC 271
++G G FG K E+ + +K + ++F E +V R + H N++K
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI--- 73
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
GV ++ + E++ G+L + + + P + +R++ A D+A +
Sbjct: 74 -GVLYKDKRLN-FITEYIKGGTLRGIIKSMDSQ-----YPWS----QRVSFAKDIASGMA 122
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG---------- 381
YLH I H DL N L+ + V+DFG+AR + DE+T+ G
Sbjct: 123 YLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLM--VDEKTQPEGLRSLKKPDRK 177
Query: 382 ----VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNL 432
V G ++APE G DV+SFGI+L E+ + D ++
Sbjct: 178 KRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF 232
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG VYK E++ A KV + + + + VE ++ + H N+VK+ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF- 103
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWM----HPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
+ N+ L+ EF A G+++ M P+TE + L++
Sbjct: 104 ---YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA------------ 147
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE----G 384
L YLH I H DLK NIL + ++DFG++ + TR+I G
Sbjct: 148 -LNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSA------KNTRTIQRRDSFIG 197
Query: 385 TTGYIAPEYGM-----GHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKSA 439
T ++APE M DV+S GI L+EM + P L KS
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM-AEIEPPHHELNPMRVLLKIAKSE 256
Query: 440 LPERAEEIRASS 451
P A+ R SS
Sbjct: 257 PPTLAQPSRWSS 268
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK D + F E ++ + + +VK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 77
Query: 269 TACSGVDF-QGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
GV + G LV E++ +G L +++ +RH+A L++ + L + +
Sbjct: 78 ---RGVSYGPGRQSLRLVMEYLPSGCLRDFL-------QRHRA--RLDASRLLLYSSQIC 125
Query: 328 CVLKYL-HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT 386
++YL C H DL NIL++ E ++DFG+A+ L D+ + G +
Sbjct: 126 KGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDYYVVREPGQS 180
Query: 387 G--YIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE + S DV+SFG++L E+FT
Sbjct: 181 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 35/220 (15%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G++GSVYK I E+ VA+K VE ++ I+ ++++ +
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIK-----------QVPVESDLQEIIKEISIMQQCDSPH 85
Query: 273 GVDFQGNDFK----ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
V + G+ FK +V E+ GS+ + + R+K +L IA +
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR------LRNK------TLTEDEIATILQS 133
Query: 329 VLK---YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
LK YLH + H D+K NILL+ E A ++DFG+A L D + V GT
Sbjct: 134 TLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGT 188
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDM 425
++APE + D++S GI +EM G P D+
Sbjct: 189 PFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 49/261 (18%)
Query: 190 ISFPYVSYRMLYNATKGFSSENLI-----GAGNFGSVYKGILFE-----STTAVAVKVFN 239
+S ++++L + F +NL+ G G FG V K F T VAVK+
Sbjct: 3 LSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM-- 60
Query: 240 VLHHDASKS----FAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLE 295
L +AS S E V + + H +++K++ ACS Q L+ E+ GSL
Sbjct: 61 -LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS----QDGPL-LLIVEYAKYGSLR 114
Query: 296 EWMHP-------------------ITEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLD 336
++ + D+R G+L ++ A ++ ++YL
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL-----ISFAWQISQGMQYL--- 166
Query: 337 CQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMG 396
+ + H DL NIL+ + +SDFG++R + D + ++A E
Sbjct: 167 AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFD 226
Query: 397 HEVSSYGDVYSFGILLLEMFT 417
H ++ DV+SFG+LL E+ T
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVT 247
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY--- 70
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +A V+
Sbjct: 71 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL-----MAGVV- 118
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +A V+
Sbjct: 71 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL-----MAGVV- 118
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +A V+
Sbjct: 71 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL-----MAGVV- 118
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 38/221 (17%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNI--RHRNLVKVFTA 270
IG G FG V++G VAVK+F+ +S+ E E+ + + RH N++ F A
Sbjct: 50 IGKGRFGEVWRGKW--RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIA 103
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
D LV ++ +GSL ++++ T + + +A+ A L
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----------VTVEGMIKLALSTASGL 152
Query: 331 KYLHLDC-----QPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE-- 383
+LH++ +P IAH DLK NIL+ T ++D G+A D T +I +
Sbjct: 153 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPN 209
Query: 384 ---GTTGYIAPEY-----GMGH-EVSSYGDVYSFGILLLEM 415
GT Y+APE M H E D+Y+ G++ E+
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 49/261 (18%)
Query: 190 ISFPYVSYRMLYNATKGFSSENLI-----GAGNFGSVYKGILFE-----STTAVAVKVFN 239
+S ++++L + F +NL+ G G FG V K F T VAVK+
Sbjct: 3 LSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM-- 60
Query: 240 VLHHDASKS----FAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLE 295
L +AS S E V + + H +++K++ ACS Q L+ E+ GSL
Sbjct: 61 -LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS----QDGPL-LLIVEYAKYGSLR 114
Query: 296 EWMHP-------------------ITEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLD 336
++ + D+R G+L ++ A ++ ++YL
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL-----ISFAWQISQGMQYL--- 166
Query: 337 CQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMG 396
+ + H DL NIL+ + +SDFG++R + D + ++A E
Sbjct: 167 AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFD 226
Query: 397 HEVSSYGDVYSFGILLLEMFT 417
H ++ DV+SFG+LL E+ T
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVT 247
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK D + F E ++ + + +VK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 76
Query: 269 TACSGVDF-QGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
GV + G LV E++ +G L +++ +RH+A L++ + L + +
Sbjct: 77 ---RGVSYGPGRQSLRLVMEYLPSGCLRDFL-------QRHRA--RLDASRLLLYSSQIC 124
Query: 328 CVLKYL-HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT 386
++YL C H DL NIL++ E ++DFG+A+ L D+ + G +
Sbjct: 125 KGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDYYVVREPGQS 179
Query: 387 G--YIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE + S DV+SFG++L E+FT
Sbjct: 180 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 106/261 (40%), Gaps = 43/261 (16%)
Query: 199 MLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHD--ASKSFAVECEVT 256
+ + + + + + L+G G++G V K ++ VA+K F D K E ++
Sbjct: 19 LYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLL 78
Query: 257 RNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNS 316
+ +RH NLV + C + LV+EF+ H I L+
Sbjct: 79 KQLRHENLVNLLEVC-----KKKKRWYLVFEFVD--------HTI------------LDD 113
Query: 317 LKRLNIAIDVACVLKYLHLD------CQPP-IAHCDLKPSNILLDDEMTAYVSDFGIARF 369
L+ +D V KYL C I H D+KP NIL+ + DFG AR
Sbjct: 114 LELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFART 173
Query: 370 LEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFTG--LRPSDD 424
L A E T Y APE +G YG DV++ G L+ EMF G L P D
Sbjct: 174 LAAPGEVYDD--EVATRWYRAPELLVGD--VKYGKAVDVWAIGCLVTEMFMGEPLFPGDS 229
Query: 425 MFKDNLNLRNCVKSALPERAE 445
++ C+ + +P E
Sbjct: 230 DIDQLYHIMMCLGNLIPRHQE 250
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 156 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 202
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR--FLEAADEQTRSIGVEGT 385
+K+L H DL N +LD++ T V+DFG+AR + + D G +
Sbjct: 203 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 259
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 260 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 300
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +A V+
Sbjct: 71 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL-----MAGVV- 118
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 21/222 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G FG VYKG LF E T AVA+K + + F E + ++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWM------HPITEEDKRHKAPGNLNSLKRL 320
+ + + ++++ + ++G L E++ + D L +
Sbjct: 94 LLGVVTK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
++ +A ++YL + H DL N+L+ D++ +SD G+ R + AAD
Sbjct: 149 HLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 205
Query: 381 GVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
++APE M + S D++S+G++L E+F+ GL+P
Sbjct: 206 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNI------RHRNL 264
+ +G G FG V G + VAVK+ N +S V ++ R I RH ++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+K++ S DF +V E+++ G L +++ +H G + ++ +
Sbjct: 74 IKLYQVIS----TPTDF-FMVMEYVSGGELFDYI-------CKH---GRVEEMEARRLFQ 118
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ + Y H + + H DLKP N+LLD M A ++DFG++ + + S G
Sbjct: 119 QILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---G 172
Query: 385 TTGYIAPEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSDD 424
+ Y APE G + D++S G++L + G P DD
Sbjct: 173 SPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G GNFGSV Y + + VAVK D + F E ++ + + +VK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY- 89
Query: 269 TACSGVDF-QGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
GV + G LV E++ +G L +++ +RH+A L++ + L + +
Sbjct: 90 ---RGVSYGPGRQSLRLVMEYLPSGCLRDFL-------QRHRA--RLDASRLLLYSSQIC 137
Query: 328 CVLKYL-HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT 386
++YL C H DL NIL++ E ++DFG+A+ L D+ + G +
Sbjct: 138 KGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDYYVVREPGQS 192
Query: 387 G--YIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE + S DV+SFG++L E+FT
Sbjct: 193 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 38/221 (17%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNI--RHRNLVKVFTA 270
IG G FG V++G VAVK+F+ +S+ E E+ + + RH N++ F A
Sbjct: 11 IGKGRFGEVWRGKW--RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIA 64
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
D LV ++ +GSL ++++ T + + +A+ A L
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----------VTVEGMIKLALSTASGL 113
Query: 331 KYLHLDC-----QPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE-- 383
+LH++ +P IAH DLK NIL+ T ++D G+A D T +I +
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPN 170
Query: 384 ---GTTGYIAPEY-----GMGH-EVSSYGDVYSFGILLLEM 415
GT Y+APE M H E D+Y+ G++ E+
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 38/221 (17%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNI--RHRNLVKVFTA 270
IG G FG V++G VAVK+F+ +S+ E E+ + + RH N++ F A
Sbjct: 17 IGKGRFGEVWRGKW--RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIA 70
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
D LV ++ +GSL ++++ T + + +A+ A L
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----------VTVEGMIKLALSTASGL 119
Query: 331 KYLHLDC-----QPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE-- 383
+LH++ +P IAH DLK NIL+ T ++D G+A D T +I +
Sbjct: 120 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPN 176
Query: 384 ---GTTGYIAPEY-----GMGH-EVSSYGDVYSFGILLLEM 415
GT Y+APE M H E D+Y+ G++ E+
Sbjct: 177 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 38/221 (17%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNI--RHRNLVKVFTA 270
IG G FG V++G VAVK+F+ +S+ E E+ + + RH N++ F A
Sbjct: 37 IGKGRFGEVWRGKW--RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIA 90
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
D LV ++ +GSL ++++ T + + +A+ A L
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----------VTVEGMIKLALSTASGL 139
Query: 331 KYLHLDC-----QPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE-- 383
+LH++ +P IAH DLK NIL+ T ++D G+A D T +I +
Sbjct: 140 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPN 196
Query: 384 ---GTTGYIAPEY-----GMGH-EVSSYGDVYSFGILLLEM 415
GT Y+APE M H E D+Y+ G++ E+
Sbjct: 197 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 81 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYV-------REHK--DNIGSQYLLN 125
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 126 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 182
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 38/221 (17%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNI--RHRNLVKVFTA 270
IG G FG V++G VAVK+F+ +S+ E E+ + + RH N++ F A
Sbjct: 12 IGKGRFGEVWRGKW--RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIA 65
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
D LV ++ +GSL ++++ T + + +A+ A L
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----------VTVEGMIKLALSTASGL 114
Query: 331 KYLHLDC-----QPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE-- 383
+LH++ +P IAH DLK NIL+ T ++D G+A D T +I +
Sbjct: 115 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPN 171
Query: 384 ---GTTGYIAPEY-----GMGH-EVSSYGDVYSFGILLLEM 415
GT Y+APE M H E D+Y+ G++ E+
Sbjct: 172 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 78 PHVCRLLGICLTSTVQ------LIMQLMPFGXLLDYV-------REHK--DNIGSQYLLN 122
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 123 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 80 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYV-------REHK--DNIGSQYLLN 124
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 125 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEV-TRNIRHR 262
F ++G G+FG V+ ++ A+K VL D + VE V + H
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
L +F C+ FQ + V E++ G L M+ I K +
Sbjct: 79 FLTHMF--CT---FQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATF-------Y 123
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGV 382
A ++ L++LH I + DLK NILLD + ++DFG+ + D +T
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC- 179
Query: 383 EGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT YIAPE +G + + D +SFG+LL EM G P
Sbjct: 180 -GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 49/261 (18%)
Query: 190 ISFPYVSYRMLYNATKGFSSENLI-----GAGNFGSVYKGILFE-----STTAVAVKVFN 239
+S ++++L + F +NL+ G G FG V K F T VAVK+
Sbjct: 3 LSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM-- 60
Query: 240 VLHHDASKS----FAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLE 295
L +AS S E V + + H +++K++ ACS Q L+ E+ GSL
Sbjct: 61 -LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS----QDGPL-LLIVEYAKYGSLR 114
Query: 296 EWMHP-------------------ITEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLD 336
++ + D+R G+L ++ A ++ ++YL
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL-----ISFAWQISQGMQYL--- 166
Query: 337 CQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMG 396
+ + H DL NIL+ + +SDFG++R + D + ++A E
Sbjct: 167 AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFD 226
Query: 397 HEVSSYGDVYSFGILLLEMFT 417
H ++ DV+SFG+LL E+ T
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVT 247
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNI------RHRNL 264
+ +G G FG V G + VAVK+ N +S V ++ R I RH ++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+K++ S DF +V E+++ G L +++ +H G + ++ +
Sbjct: 74 IKLYQVIS----TPTDF-FMVMEYVSGGELFDYI-------CKH---GRVEEMEARRLFQ 118
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ + Y H + + H DLKP N+LLD M A ++DFG++ + + S G
Sbjct: 119 QILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---G 172
Query: 385 TTGYIAPEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSDD 424
+ Y APE G + D++S G++L + G P DD
Sbjct: 173 SPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 38/221 (17%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNI--RHRNLVKVFTA 270
IG G FG V++G VAVK+F+ +S+ E E+ + + RH N++ F A
Sbjct: 14 IGKGRFGEVWRGKW--RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIA 67
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
D LV ++ +GSL ++++ T + + +A+ A L
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----------VTVEGMIKLALSTASGL 116
Query: 331 KYLHLDC-----QPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE-- 383
+LH++ +P IAH DLK NIL+ T ++D G+A D T +I +
Sbjct: 117 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPN 173
Query: 384 ---GTTGYIAPEY-----GMGH-EVSSYGDVYSFGILLLEM 415
GT Y+APE M H E D+Y+ G++ E+
Sbjct: 174 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 97 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 143
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR--FLEAADEQTRSIGVEGT 385
+K+L H DL N +LD++ T V+DFG+AR + + D G +
Sbjct: 144 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 241
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 102 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 148
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR--FLEAADEQTRSIGVEGT 385
+K+L H DL N +LD++ T V+DFG+AR + + D G +
Sbjct: 149 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 205
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 206 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 246
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 98 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 144
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR--FLEAADEQTRSIGVEGT 385
+K+L H DL N +LD++ T V+DFG+AR + + D G +
Sbjct: 145 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 201
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 202 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 242
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYV-------REHK--DNIGSQYLLN 123
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 124 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 78 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYV-------REHK--DNIGSQYLLN 122
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 123 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 77 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYV-------REHK--DNIGSQYLLN 121
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 122 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGXLLDYV-------REHK--DNIGSQYLLN 121
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 122 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 13/219 (5%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFE---STTAVAVKVF--NVLHHDASKSFAVECEVTRNI 259
+ F+ ++G G FGSV + L + S VAVK+ +++ + F E +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 260 RHRNLVKVFTACSGVDFQGN-DFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLK 318
H ++ K+ +G ++ FM +G L H + + P NL
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDL----HAFLLASRIGENPFNLPLQT 138
Query: 319 RLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTR 378
+ +D+AC ++YL H DL N +L ++MT V+DFG++R + + D +
Sbjct: 139 LVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ 195
Query: 379 SIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ ++A E + + + DV++FG+ + E+ T
Sbjct: 196 GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 111/263 (42%), Gaps = 36/263 (13%)
Query: 202 NATKGFSSEN---LIGA-GNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTR 257
+ T+ + E+ +IG G+FG VYK E++ A KV + + + + VE ++
Sbjct: 3 HVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 62
Query: 258 NIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM----HPITEEDKRHKAPGN 313
+ H N+VK+ A + N+ L+ EF A G+++ M P+TE +
Sbjct: 63 SCDHPNIVKLLDAF----YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQT 117
Query: 314 LNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAA 373
L++ L YLH I H DLK NIL + ++DFG++
Sbjct: 118 LDA-------------LNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 161
Query: 374 DEQTRSIGVEGTTGYIAPEYGM-----GHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKD 428
Q R + GT ++APE M DV+S GI L+EM + P
Sbjct: 162 XIQRRDSFI-GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM-AEIEPPHHELNP 219
Query: 429 NLNLRNCVKSALPERAEEIRASS 451
L KS P A+ R SS
Sbjct: 220 MRVLLKIAKSEPPTLAQPSRWSS 242
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 104/252 (41%), Gaps = 41/252 (16%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG VYK E++ A KV + + + + VE ++ + H N+VK+ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF- 103
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWM----HPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
+ N+ L+ EF A G+++ M P+TE + L++
Sbjct: 104 ---YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA------------ 147
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE----G 384
L YLH I H DLK NIL + ++DFG++ + TR I G
Sbjct: 148 -LNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSA------KNTRXIQRRDSFIG 197
Query: 385 TTGYIAPEYGM-----GHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKSA 439
T ++APE M DV+S GI L+EM + P L KS
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM-AEIEPPHHELNPMRVLLKIAKSE 256
Query: 440 LPERAEEIRASS 451
P A+ R SS
Sbjct: 257 PPTLAQPSRWSS 268
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 104/252 (41%), Gaps = 41/252 (16%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG VYK E++ A KV + + + + VE ++ + H N+VK+ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF- 103
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWM----HPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
+ N+ L+ EF A G+++ M P+TE + L++
Sbjct: 104 ---YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA------------ 147
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE----G 384
L YLH I H DLK NIL + ++DFG++ + TR I G
Sbjct: 148 -LNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSA------KNTRXIQRRDXFIG 197
Query: 385 TTGYIAPEYGM-----GHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKSA 439
T ++APE M DV+S GI L+EM + P L KS
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM-AEIEPPHHELNPMRVLLKIAKSE 256
Query: 440 LPERAEEIRASS 451
P A+ R SS
Sbjct: 257 PPTLAQPSRWSS 268
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G+ E T VA+K N + F E V + ++V+
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK--APGNLNSLKRLNIAI 324
+ GV QG ++ E M G L+ ++ + E + + AP +L+ K + +A
Sbjct: 78 LL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAG 130
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ + H DL N ++ ++ T + DFG+ R + D +
Sbjct: 131 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL 187
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+++PE ++Y DV+SFG++L E+ T
Sbjct: 188 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 98 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 144
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI----GVE 383
+K+L H DL N +LD++ T V+DFG+AR + D++ S+ G +
Sbjct: 145 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMLDKEFDSVHNKTGAK 199
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 242
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +A V+
Sbjct: 72 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL-----MAGVV- 119
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 21/222 (9%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVK 266
+G FG VYKG LF E T AVA+K + + F E + ++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWM------HPITEEDKRHKAPGNLNSLKRL 320
+ + + ++++ + ++G L E++ + D L +
Sbjct: 77 LLGVVTK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
++ +A ++YL + H DL N+L+ D++ +SD G+ R + AAD
Sbjct: 132 HLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 381 GVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
++APE M + S D++S+G++L E+F+ GL+P
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 124
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 125 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 97 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 143
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR--FLEAADEQTRSIGVEGT 385
+K+L H DL N +LD++ T V+DFG+AR + + D G +
Sbjct: 144 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 241
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 102 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 146
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 147 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 203
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 204 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 87 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 131
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 132 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 188
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 189 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 124
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 125 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +A V+
Sbjct: 71 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL-----MAGVV- 118
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +A V+
Sbjct: 72 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL-----MAGVV- 119
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +A V+
Sbjct: 72 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL-----MAGVV- 119
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +A V+
Sbjct: 72 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL-----MAGVV- 119
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 128
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 129 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 212 LIGAGNFGSVYKGILFES---TTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+IG G+FG VY G L ++ AVK N + S F E + ++ H N++ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + +V +M +G L ++ T N + + VA
Sbjct: 95 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVA 141
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR--FLEAADEQTRSIGVEGT 385
+K+L H DL N +LD++ T V+DFG+AR + + D G +
Sbjct: 142 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 198
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
++A E + ++ DV+SFG+LL E+ T G P D+
Sbjct: 199 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 239
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 51/245 (20%)
Query: 202 NATKGF----SSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLH---------HDASKS 248
++T GF + ++G G V + I + AVK+ +V + ++
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 249 FAVECEVTRNIR-HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM-HPITEEDK 306
E ++ R + H N++++ ++ N F LV++ M G L +++ +T +K
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYLTEKVTLSEK 124
Query: 307 RHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGI 366
+ K + ++V C L L+ I H DLKP NILLDD+M ++DFG
Sbjct: 125 ETR--------KIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 367 ARFLEAADEQTRSIGVEGTTGYIAPEY----------GMGHEVSSYGDVYSFGILLLEMF 416
+ L+ E+ RS+ GT Y+APE G G EV D++S G+++ +
Sbjct: 171 SCQLDPG-EKLRSVC--GTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLL 223
Query: 417 TGLRP 421
G P
Sbjct: 224 AGSPP 228
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 79 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 123
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 124 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 41/253 (16%)
Query: 181 KKRGNPTPSISFPYVSYRMLYNATKGFSSENLIGAGNFGSVYKGILFES---TTAVAVKV 237
K + NP P+I +P + + +++IG GNFG V K + + A ++
Sbjct: 6 KVKNNPDPTI-YPVLDW-------NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM 57
Query: 238 FNVLHHDASKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEE 296
D + FA E EV + H N++ + AC + + L E+ +G+L +
Sbjct: 58 KEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRGYLYLAIEYAPHGNLLD 112
Query: 297 WMHP--ITEEDKR----HKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSN 350
++ + E D + L+S + L+ A DVA + YL Q H +L N
Sbjct: 113 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARN 169
Query: 351 ILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSY------GD 404
IL+ + A ++DFG++R E + V+ T G + P M E +Y D
Sbjct: 170 ILVGENYVAKIADFGLSRGQE--------VYVKKTMGRL-PVRWMAIESLNYSVYTTNSD 220
Query: 405 VYSFGILLLEMFT 417
V+S+G+LL E+ +
Sbjct: 221 VWSYGVLLWEIVS 233
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G+ E T VA+K N + F E V + ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK--APGNLNSLKRLNIAI 324
+ GV QG ++ E M G L+ ++ + E + + AP +L+ K + +A
Sbjct: 87 LL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAG 139
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ + H DL N ++ ++ T + DFG+ R + D +
Sbjct: 140 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL 196
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+++PE ++Y DV+SFG++L E+ T
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 69
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +A V+
Sbjct: 70 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL-----MAGVV- 117
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 118 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 121
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 122 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 124
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 125 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 83 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 127
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 128 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 184
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 185 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +
Sbjct: 71 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGV------V 118
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +A V+
Sbjct: 72 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL-----MAGVV- 119
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKV-FNVLHHD----ASKSFAVECEVTRNIRHRNLV 265
++G+G FG+VYKGI V + V VL + A+K E V + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
++ C Q LV + M G L D + G L S LN +
Sbjct: 83 RLLGICLTSTVQ------LVTQLMPYGCLL---------DHVRENRGRLGSQDLLNWCMQ 127
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
+A + YL D + + H DL N+L+ ++DFG+AR L+ + + + G +
Sbjct: 128 IAKGMSYLE-DVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP 184
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 185 IKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 26/227 (11%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVEC-EVTRNIRH-- 261
+ + +++IG G V + + + AVK+ V S E E TR H
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 262 RNLVKVFTACSGVD-FQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
R + + +D ++ + F LV++ M G L +++ TE+ L+ +
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEK-------VALSEKETR 203
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
+I + + +LH + I H DLKP NILLDD M +SDFG + LE E+ R +
Sbjct: 204 SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG-EKLREL 259
Query: 381 GVEGTTGYIAPEY---GMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
GT GY+APE M YG D+++ G++L + G P
Sbjct: 260 C--GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +
Sbjct: 71 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGV------V 118
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +A V+
Sbjct: 71 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL-----MAGVV- 118
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +
Sbjct: 71 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGV------V 118
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +
Sbjct: 72 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGV------V 119
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 121
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 122 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +
Sbjct: 71 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGV------V 118
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 42/264 (15%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F LIG+G FG V+K ++ + A + E + + H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVH 69
Query: 267 VFTACSGVDF---------QGNDFKA---------------LVYEFMANGSLEEWMHPIT 302
G D+ + +D+ + EF G+LE+W+
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 303 EEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVS 362
E L+ + L + + + Y+H + H DLKPSNI L D +
Sbjct: 130 GE--------KLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIG 178
Query: 363 DFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPS 422
DFG+ L+ ++TRS +GT Y++PE + D+Y+ G++L E+ +
Sbjct: 179 DFGLVTSLKNDGKRTRS---KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA 235
Query: 423 DDMFKDNLNLRNCVKSALPERAEE 446
+ K +LR+ + S + ++ E+
Sbjct: 236 FETSKFFTDLRDGIISDIFDKKEK 259
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 71 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 115
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 116 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 172
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 173 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 74 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 118
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 119 WCVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 175
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 176 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTRNIRHRNLVKV 267
+G+GNFG+V KG ++ V +L ++A+ E V + + + +V++
Sbjct: 19 LGSGNFGTVKKGY-YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + LV E G L +++ + RH N+ + + V+
Sbjct: 78 IGICEAESWM------LVMEMAELGPLNKYL-----QQNRHVKDKNI-----IELVHQVS 121
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT-- 385
+KYL + H DL N+LL + A +SDFG+++ L ADE G
Sbjct: 122 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR-ADENXYKAQTHGKWP 177
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE ++ SS DV+SFG+L+ E F+ G +P M
Sbjct: 178 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTRNIRHRNLVKV 267
+G+GNFG+V KG ++ V +L ++A+ E V + + + +V++
Sbjct: 378 LGSGNFGTVKKG-YYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + LV E G L +++ + RH N+ + + V+
Sbjct: 437 IGICEAESWM------LVMEMAELGPLNKYL-----QQNRHVKDKNI-----IELVHQVS 480
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT-- 385
+KYL + H DL N+LL + A +SDFG+++ L ADE G
Sbjct: 481 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWP 536
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE ++ SS DV+SFG+L+ E F+ G +P M
Sbjct: 537 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 577
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTRNIRHRNLVKV 267
+G+GNFG+V KG ++ V +L ++A+ E V + + + +V++
Sbjct: 377 LGSGNFGTVKKG-YYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + LV E G L +++ + RH N+ + + V+
Sbjct: 436 IGICEAESWM------LVMEMAELGPLNKYL-----QQNRHVKDKNI-----IELVHQVS 479
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT-- 385
+KYL + H DL N+LL + A +SDFG+++ L ADE G
Sbjct: 480 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWP 535
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE ++ SS DV+SFG+L+ E F+ G +P M
Sbjct: 536 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTRNIRHRNLVKV 267
+G+GNFG+V KG ++ V +L ++A+ E V + + + +V++
Sbjct: 19 LGSGNFGTVKKGY-YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + LV E G L +++ + RH N+ + + V+
Sbjct: 78 IGICEAESWM------LVMEMAELGPLNKYL-----QQNRHVKDKNI-----IELVHQVS 121
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT-- 385
+KYL + H DL N+LL + A +SDFG+++ L ADE G
Sbjct: 122 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWP 177
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE ++ SS DV+SFG+L+ E F+ G +P M
Sbjct: 178 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 47/238 (19%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLH---------HDASKSFAVECEV 255
+ + + ++G G V + I + AVK+ +V + ++ E ++
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 256 TRNIR-HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM-HPITEEDKRHKAPGN 313
R + H N++++ ++ N F LV++ M G L +++ +T +K +
Sbjct: 64 LRKVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR---- 114
Query: 314 LNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAA 373
K + ++V C L L+ I H DLKP NILLDD+M ++DFG + L+
Sbjct: 115 ----KIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG 164
Query: 374 DEQTRSIGVEGTTGYIAPEY----------GMGHEVSSYGDVYSFGILLLEMFTGLRP 421
E+ R + GT Y+APE G G EV D++S G+++ + G P
Sbjct: 165 -EKLREVC--GTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTRNIRHRNLVKV 267
+G+GNFG+V KG ++ V +L ++A+ E V + + + +V++
Sbjct: 13 LGSGNFGTVKKGY-YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + LV E G L +++ + RH N+ + + V+
Sbjct: 72 IGICEAESWM------LVMEMAELGPLNKYL-----QQNRHVKDKNI-----IELVHQVS 115
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT-- 385
+KYL + H DL N+LL + A +SDFG+++ L ADE G
Sbjct: 116 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWP 171
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE ++ SS DV+SFG+L+ E F+ G +P M
Sbjct: 172 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 212
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTRNIRHRNLVKV 267
+G+GNFG+V KG ++ V +L ++A+ E V + + + +V++
Sbjct: 33 LGSGNFGTVKKGY-YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + LV E G L +++ + RH N+ + + V+
Sbjct: 92 IGICEAESWM------LVMEMAELGPLNKYL-----QQNRHVKDKNI-----IELVHQVS 135
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT-- 385
+KYL + H DL N+LL + A +SDFG+++ L ADE G
Sbjct: 136 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWP 191
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE ++ SS DV+SFG+L+ E F+ G +P M
Sbjct: 192 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 232
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTRNIRHRNLVKV 267
+G+GNFG+V KG ++ V +L ++A+ E V + + + +V++
Sbjct: 25 LGSGNFGTVKKGY-YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + LV E G L +++ + RH N+ + + V+
Sbjct: 84 IGICEAESWM------LVMEMAELGPLNKYL-----QQNRHVKDKNI-----IELVHQVS 127
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT-- 385
+KYL + H DL N+LL + A +SDFG+++ L ADE G
Sbjct: 128 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWP 183
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE ++ SS DV+SFG+L+ E F+ G +P M
Sbjct: 184 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 224
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTRNIRHRNLVKV 267
+G+GNFG+V KG ++ V +L ++A+ E V + + + +V++
Sbjct: 15 LGSGNFGTVKKGY-YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + LV E G L +++ + RH N+ + + V+
Sbjct: 74 IGICEAESWM------LVMEMAELGPLNKYL-----QQNRHVKDKNI-----IELVHQVS 117
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT-- 385
+KYL + H DL N+LL + A +SDFG+++ L ADE G
Sbjct: 118 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWP 173
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE ++ SS DV+SFG+L+ E F+ G +P M
Sbjct: 174 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 214
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G+ E T VA+K N + F E V + ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK--APGNLNSLKRLNIAI 324
+ GV QG ++ E M G L+ ++ + E + + AP +L+ K + +A
Sbjct: 80 LL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAG 132
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ + H DL N ++ ++ T + DFG+ R + D +
Sbjct: 133 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 189
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+++PE ++Y DV+SFG++L E+ T
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 111/266 (41%), Gaps = 61/266 (22%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG G +G V+ G VAVKVF +AS E T +RH N++ A
Sbjct: 45 IGKGRYGEVWMGKW--RGEKVAVKVF-FTTEEASWFRETEIYQTVLMRHENILGFIAA-- 99
Query: 273 GVDFQGNDFKALVY---EFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
D +G +Y ++ NGSL +++ T L++ L +A
Sbjct: 100 --DIKGTGSWTQLYLITDYHENGSLYDYLKSTT-----------LDAKSMLKLAYSSVSG 146
Query: 330 LKYLHLDC-----QPPIAHCDLKPSNILLDDEMTAYVSDFGIA-RFLEAADE-----QTR 378
L +LH + +P IAH DLK NIL+ T ++D G+A +F+ +E TR
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR 206
Query: 379 SIGVEGTTGYIAPEY-----GMGHEVSSY--GDVYSFGILLLEM---------------- 415
GT Y+ PE H SY D+YSFG++L E+
Sbjct: 207 V----GTKRYMPPEVLDESLNRNH-FQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261
Query: 416 FTGLRPSDDMFKDNLNLRNCVKSALP 441
+ L PSD ++D + C+K P
Sbjct: 262 YHDLVPSDPSYEDMREI-VCIKKLRP 286
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYV-------REHK--DNIGSQYLLN 123
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG A+ L A +++ + G
Sbjct: 124 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 51/245 (20%)
Query: 202 NATKGF----SSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLH---------HDASKS 248
++T GF + ++G G V + I + AVK+ +V + ++
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 249 FAVECEVTRNIR-HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM-HPITEEDK 306
E ++ R + H N++++ ++ N F LV++ M G L +++ +T +K
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYLTEKVTLSEK 124
Query: 307 RHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGI 366
+ K + ++V C L L+ I H DLKP NILLDD+M ++DFG
Sbjct: 125 ETR--------KIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 367 ARFLEAADEQTRSIGVEGTTGYIAPEY----------GMGHEVSSYGDVYSFGILLLEMF 416
+ L+ E+ R + GT Y+APE G G EV D++S G+++ +
Sbjct: 171 SCQLDPG-EKLREVC--GTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLL 223
Query: 417 TGLRP 421
G P
Sbjct: 224 AGSPP 228
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 81 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYV-------REHK--DNIGSQYLLN 125
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG A+ L A +++ + G
Sbjct: 126 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 182
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTRNIRHRNLVKV 267
+G+GNFG+V KG ++ V +L ++A+ E V + + + +V++
Sbjct: 35 LGSGNFGTVKKG-YYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + LV E G L +++ + RH N+ + + V+
Sbjct: 94 IGICEAESWM------LVMEMAELGPLNKYL-----QQNRHVKDKNI-----IELVHQVS 137
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT-- 385
+KYL + H DL N+LL + A +SDFG+++ L ADE G
Sbjct: 138 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWP 193
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE ++ SS DV+SFG+L+ E F+ G +P M
Sbjct: 194 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTRNIRHRNLVKV 267
+G+GNFG+V KG ++ V +L ++A+ E V + + + +V++
Sbjct: 35 LGSGNFGTVKKG-YYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C + LV E G L +++ + RH N+ + + V+
Sbjct: 94 IGICEAESWM------LVMEMAELGPLNKYL-----QQNRHVKDKNI-----IELVHQVS 137
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT-- 385
+KYL + H DL N+LL + A +SDFG+++ L ADE G
Sbjct: 138 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR-ADENYYKAQTHGKWP 193
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE ++ SS DV+SFG+L+ E F+ G +P M
Sbjct: 194 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYV-------REHK--DNIGSQYLLN 123
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG A+ L A +++ + G
Sbjct: 124 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 29/251 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F LIG+G FG V+K +K + A + E + + H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 267 VFTACSGVDFQ-----GNDFKA------LVYEFMANGSLEEWMHPITEEDKRHKAPGNLN 315
G D+ N ++ + EF G+LE+W+ E L+
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE--------KLD 120
Query: 316 SLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADE 375
+ L + + + Y+H + + DLKPSNI L D + DFG+ L+ +
Sbjct: 121 KVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177
Query: 376 QTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNC 435
+ RS +GT Y++PE + D+Y+ G++L E+ + + K +LR+
Sbjct: 178 RXRS---KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG 234
Query: 436 VKSALPERAEE 446
+ S + ++ E+
Sbjct: 235 IISDIFDKKEK 245
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V++ + A K H ++ E + +RH LV + A
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-- 222
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
F+ ++ ++YEFM+ G L E + +E + + +++ V L +
Sbjct: 223 ---FEDDNEMVMIYEFMSGGELFE---KVADEHNKMSEDEAVEYMRQ------VCKGLCH 270
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVS--DFGIARFLEAADEQTRSIGVE-GTTGYI 389
+H + H DLKP NI+ + + + DFG+ L+ +S+ V GT +
Sbjct: 271 MHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK----QSVKVTTGTAEFA 323
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKS 438
APE G V Y D++S G+L + +GL P D+ LRN VKS
Sbjct: 324 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDETLRN-VKS 370
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 24/212 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V++ + A K H ++ E + +RH LV + A
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-- 116
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
F+ ++ ++YEFM+ G L E + +E + + +++ V L +
Sbjct: 117 ---FEDDNEMVMIYEFMSGGELFE---KVADEHNKMSEDEAVEYMRQ------VCKGLCH 164
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVS--DFGIARFLEAADEQTRSIGVE-GTTGYI 389
+H + H DLKP NI+ + + + DFG+ L+ +S+ V GT +
Sbjct: 165 MHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK----QSVKVTTGTAEFA 217
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
APE G V Y D++S G+L + +GL P
Sbjct: 218 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFN--VLHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
IG G+F +VYKG+ E+T VA L + F E E + ++H N+V+ + +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL-NIAIDVACV 329
+G LV E +G+L+ ++ KR K + +K L + +
Sbjct: 94 WEST-VKGKKCIVLVTELXTSGTLKTYL-------KRFK----VXKIKVLRSWCRQILKG 141
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEM-TAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L++LH PPI H DLK NI + + + D G+A A+ + V GT +
Sbjct: 142 LQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK----AVIGTPEF 196
Query: 389 IAPE-YGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
APE Y ++ S DVY+FG LE T P
Sbjct: 197 XAPEXYEEKYDESV--DVYAFGXCXLEXATSEYP 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 79 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 123
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG A+ L A +++ + G
Sbjct: 124 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 128
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG A+ L A +++ + G
Sbjct: 129 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 185
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G+ E T VA+K N + F E V + ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK--APGNLNSLKRLNIAI 324
+ GV QG ++ E M G L+ ++ + E + + AP +L+ K + +A
Sbjct: 93 LL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAG 145
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ + H DL N ++ ++ T + DFG+ R + D +
Sbjct: 146 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 202
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+++PE ++Y DV+SFG++L E+ T
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G+ E T VA+K N + F E V + ++V+
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK--APGNLNSLKRLNIAI 324
+ GV QG ++ E M G L+ ++ + E + + AP +L+ K + +A
Sbjct: 84 LL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAG 136
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ + H DL N ++ ++ T + DFG+ R + D +
Sbjct: 137 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 193
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+++PE ++Y DV+SFG++L E+ T
Sbjct: 194 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V + + AVAVK+ ++ D ++ E + + H N+VK +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY--- 71
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +
Sbjct: 72 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGV------V 119
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G+ E T VA+K N + F E V + ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK--APGNLNSLKRLNIAI 324
+ GV QG ++ E M G L+ ++ + E + + AP +L+ K + +A
Sbjct: 87 LL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAG 139
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ + H DL N ++ ++ T + DFG+ R + D +
Sbjct: 140 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 196
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+++PE ++Y DV+SFG++L E+ T
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G+ E T VA+K N + F E V + ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK--APGNLNSLKRLNIAI 324
+ GV QG ++ E M G L+ ++ + E + + AP +L+ K + +A
Sbjct: 86 LL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAG 138
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ + H DL N ++ ++ T + DFG+ R + D +
Sbjct: 139 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+++PE ++Y DV+SFG++L E+ T
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++G+G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 121
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG A+ L A +++ + G
Sbjct: 122 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 178
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G+ E T VA+K N + F E V + ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK--APGNLNSLKRLNIAI 324
+ GV QG ++ E M G L+ ++ + E + + AP +L+ K + +A
Sbjct: 86 LL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAG 138
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ + H DL N ++ ++ T + DFG+ R + D +
Sbjct: 139 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+++PE ++Y DV+SFG++L E+ T
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 25/241 (10%)
Query: 186 PTPSISFPYVSYRMLYNATKGF---SSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLH 242
P P F + A F S ++G G FG V+K + +A K+
Sbjct: 67 PAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG 126
Query: 243 HDASKSFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPIT 302
+ E V + H NL++++ A F+ + LV E++ G L I
Sbjct: 127 MKDKEEVKNEISVMNQLDHANLIQLYDA-----FESKNDIVLVMEYVDGGEL---FDRII 178
Query: 303 EEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILL--DDEMTAY 360
+E NL L + + ++++H Q I H DLKP NIL D
Sbjct: 179 DESY------NLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIK 229
Query: 361 VSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLR 420
+ DFG+AR + ++ + GT ++APE VS D++S G++ + +GL
Sbjct: 230 IIDFGLARRYKPREKLKVNF---GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLS 286
Query: 421 P 421
P
Sbjct: 287 P 287
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G+ E T VA+K N + F E V + ++V+
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK--APGNLNSLKRLNIAI 324
+ GV QG ++ E M G L+ ++ + E + + AP +L+ K + +A
Sbjct: 115 LL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAG 167
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ + H DL N ++ ++ T + DFG+ R + D +
Sbjct: 168 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 224
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+++PE ++Y DV+SFG++L E+ T
Sbjct: 225 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS--KSFAVECE---VTRNIRHRNLV 265
++G+G FG+V+KG+ ++ + V + D S +SF + ++ H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
++ C G Q LV +++ GSL + ++H+ G L LN +
Sbjct: 97 RLLGLCPGSSLQ------LVTQYLPLGSL-------LDHVRQHR--GALGPQLLLNWGVQ 141
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
+A + YL + + H +L N+LL V+DFG+A L D+Q +
Sbjct: 142 IAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 198
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++A E + + DV+S+G+ + E+ T
Sbjct: 199 IKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 20/213 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH-DASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G G V + + AVAVK+ ++ D ++ E + + + H N+VK +
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
G +GN + L E+ + G L + + P D P +L +
Sbjct: 71 -GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGV------V 118
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YLH I H D+KP N+LLD+ +SDFG+A + + + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 392 EYGMGHEVSSYG-DVYSFGILLLEMFTGLRPSD 423
E E + DV+S GI+L M G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++ +G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 84 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYV-------REHK--DNIGSQYLLN 128
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 129 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 22/218 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV---ECEVTRNIRHRN 263
F ++G G FG V + + A K K A+ E ++ + R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
+V + A ++ D LV M G L+ ++ H + + A
Sbjct: 246 VVSLAYA-----YETKDALCLVLTLMNGGDLKFHIY--------HMGQAGFPEARAVFYA 292
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ C L+ LH + I + DLKP NILLDD +SD G+A + + QT G
Sbjct: 293 AEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIK-GRV 346
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT GY+APE + D ++ G LL EM G P
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 25/239 (10%)
Query: 198 RMLYNATKGFSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDAS 246
++ YN F NL +GAG FG V + F ++ VAVK+ + H D
Sbjct: 26 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 85
Query: 247 KSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEED 305
++ E ++ ++ +H N+V + AC+ G ++ E+ G L ++ E D
Sbjct: 86 EALMSELKIMSHLGQHENIVNLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAEAD 140
Query: 306 --KRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSD 363
K P L L L+ + VA + +L H D+ N+LL + A + D
Sbjct: 141 LDKEDGRPLELRDL--LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGD 195
Query: 364 FGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
FG+AR + ++APE + DV+S+GILL E+F+ GL P
Sbjct: 196 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 254
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS--KSFAVECE---VTRNIRHRNLV 265
++G+G FG+V+KG+ ++ + V + D S +SF + ++ H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
++ C G Q LV +++ GSL + ++H+ G L LN +
Sbjct: 79 RLLGLCPGSSLQ------LVTQYLPLGSL-------LDHVRQHR--GALGPQLLLNWGVQ 123
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
+A + YL + + H +L N+LL V+DFG+A L D+Q +
Sbjct: 124 IAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++A E + + DV+S+G+ + E+ T
Sbjct: 181 IKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++ +G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 128
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 129 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 22/218 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV---ECEVTRNIRHRN 263
F ++G G FG V + + A K K A+ E ++ + R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
+V + A ++ D LV M G L+ ++ H + + A
Sbjct: 246 VVSLAYA-----YETKDALCLVLTLMNGGDLKFHIY--------HMGQAGFPEARAVFYA 292
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ C L+ LH + I + DLKP NILLDD +SD G+A + + QT G
Sbjct: 293 AEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIK-GRV 346
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT GY+APE + D ++ G LL EM G P
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 25/239 (10%)
Query: 198 RMLYNATKGFSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDAS 246
++ YN F NL +GAG FG V + F ++ VAVK+ + H D
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 247 KSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEED 305
++ E ++ ++ +H N+V + AC+ G ++ E+ G L ++ E D
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAEAD 148
Query: 306 --KRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSD 363
K P L L L+ + VA + +L H D+ N+LL + A + D
Sbjct: 149 LDKEDGRPLELRDL--LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGD 203
Query: 364 FGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
FG+AR + ++APE + DV+S+GILL E+F+ GL P
Sbjct: 204 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 262
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 31/221 (14%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNI------RHRNL 264
+ +G G FG V G + VAVK+ N +S V ++ R I RH ++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILN---RQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+K++ S + F +V E+++ G L +++ G L+ + +
Sbjct: 79 IKLYQVIST---PSDIF--MVMEYVSGGELFDYI----------CKNGRLDEKESRRLFQ 123
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ + Y H + H DLKP N+LLD M A ++DFG++ + + S G
Sbjct: 124 QILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---G 177
Query: 385 TTGYIAPEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSDD 424
+ Y APE G + D++S G++L + G P DD
Sbjct: 178 SPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVF-----NVLHHDASKSFAVECEVTRNIRH 261
F ++ +G FG+VYKG+ V + V A+K E V ++ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++ ++ C Q L+ + M G L +++ + HK N+ S LN
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYV-------REHK--DNIGSQYLLN 121
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
+ +A + YL + H DL N+L+ ++DFG+A+ L A +++ + G
Sbjct: 122 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSD 423
+ ++A E + + DV+S+G+ + E+ T G +P D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 33/234 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+G G F V + + T A K+ N L + E + R ++H N+V++ +
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
S F LV++ + G L E + +E D H L S+ ++
Sbjct: 99 ISE-----EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIH------ 147
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDE---MTAYVSDFGIARFLEAADEQTRSIGVEG 384
Q I H DLKP N+LL + ++DFG+A +E EQ G G
Sbjct: 148 ----------QHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFGFAG 195
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKS 438
T GY++PE D+++ G++L + G P D +D L +K+
Sbjct: 196 TPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWD--EDQHKLYQQIKA 247
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 99/252 (39%), Gaps = 27/252 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRN 263
F ++G G+FG V + E+ AVKV +L D + E + R+
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
+ C FQ D V EF+ G L M I + + +A A
Sbjct: 85 FLTQLFCC----FQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARF-------YA 130
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
++ L +LH I + DLK N+LLD E ++DFG+ + E +
Sbjct: 131 AEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFC 185
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP-----SDDMFKDNLNLRNCVKS 438
GT YIAPE D ++ G+LL EM G P DD+F+ LN +
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT 245
Query: 439 ALPERAEEIRAS 450
L E A I S
Sbjct: 246 WLHEDATGILKS 257
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 26/218 (11%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTRNI 259
K + + +G G F +VYK + VA+K + H +K + E ++ + +
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
H N++ + A F +LV++FM E + I +++ P ++ +
Sbjct: 70 SHPNIIGLLDA-----FGHKSNISLVFDFM-----ETDLEVIIKDNSLVLTPSHIKAYML 119
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
+ + L+YLH Q I H DLKP+N+LLD+ ++DFG+A+ + +
Sbjct: 120 MTLQ-----GLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXH 171
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYG-DVYSFGILLLEMF 416
V T Y APE G + G D+++ G +L E+
Sbjct: 172 QVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 28/246 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHD-ASKSFAVECEVTRNIRHRNLV 265
F +G G FG V++ A+K + + + A + E + + H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 266 KVFTAC----SGVDFQGNDFKALVY---EFMANGSLEEWMHPITEEDKRHKAPGNLNSLK 318
+ F A + Q + K +Y + +L++WM+ ++R ++
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC------ 120
Query: 319 RLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ-- 376
L+I + +A +++LH + H DLKPSNI + V DFG+ ++ +E+
Sbjct: 121 -LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 377 --------TRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKD 428
R G GT Y++PE G+ S D++S G++L E+ + +
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRT 236
Query: 429 NLNLRN 434
++RN
Sbjct: 237 LTDVRN 242
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G+ E T VA+K N + F E V + ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK--APGNLNSLKRLNIAI 324
+ GV QG ++ E M G L+ ++ + E + + AP +L+ K + +A
Sbjct: 80 LL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAG 132
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ + H DL N + ++ T + DFG+ R + D +
Sbjct: 133 EIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 189
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+++PE ++Y DV+SFG++L E+ T
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 31/232 (13%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV----EC 253
R++YN + F ++L+G G +G V + VA+K FA+ E
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREI 60
Query: 254 EVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGN 313
++ ++ +H N++ +F F+ + ++ E M +H + +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVI----------S 105
Query: 314 LNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE-- 371
L +I + L+ + + + H DLKPSN+L++ V DFG+AR ++
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165
Query: 372 AADEQTRSIGVEGTTGYIAPEYGMGHEV-------SSYGDVYSFGILLLEMF 416
AAD + G T Y+A + EV S DV+S G +L E+F
Sbjct: 166 AADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 106/277 (38%), Gaps = 49/277 (17%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVT-----R 257
AT + IG G +G+VYK S VA+K V + + + EV
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 258 NIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
H N+V++ C+ LV+E + + L ++ DK P L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL------DK--APPPGLPAE 112
Query: 318 KRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQT 377
++ L +LH +C I H DLKP NIL+ T ++DFG+AR Q
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QM 166
Query: 378 RSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMF--------------------- 416
V T Y APE + ++ D++S G + EMF
Sbjct: 167 ALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL 226
Query: 417 TGLRPSDDMFKDNLNLRNC--------VKSALPERAE 445
GL P DD +D R V+S +PE E
Sbjct: 227 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEE 263
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG G+ G V + S VAVK ++ + E + R+ +H N+V+++ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 216
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ D +V EF+ G+L + I + +N + + + V L
Sbjct: 217 ---YLVGDELWVVMEFLEGGALTD----IVTHTR-------MNEEQIAAVCLAVLQALSV 262
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
LH + H D+K +ILL + +SDFG + + E R + GT ++APE
Sbjct: 263 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPE 317
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLRP--------SDDMFKDNLNLR 433
D++S GI+++EM G P + M +DNL R
Sbjct: 318 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 366
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 36/220 (16%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEV--TRNIRHRNLVKVFTA 270
+G G +G V++G VAVK+F+ KS+ E E+ T +RH N++ F A
Sbjct: 16 VGKGRYGEVWRGSW--QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILG-FIA 69
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ L+ + GSL +++ T L+++ L I + +A L
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----------LDTVSCLRIVLSIASGL 118
Query: 331 KYLHLDC-----QPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE-- 383
+LH++ +P IAH DLK NIL+ ++D G+A + Q +G
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL-DVGNNPR 177
Query: 384 -GTTGYIAPEYGMGHEVS-----SYG--DVYSFGILLLEM 415
GT Y+APE + + SY D+++FG++L E+
Sbjct: 178 VGTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 36/220 (16%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEV--TRNIRHRNLVKVFTA 270
+G G +G V++G VAVK+F+ KS+ E E+ T +RH N++ F A
Sbjct: 45 VGKGRYGEVWRGSW--QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILG-FIA 98
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ L+ + GSL +++ T L+++ L I + +A L
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----------LDTVSCLRIVLSIASGL 147
Query: 331 KYLHLDC-----QPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE-- 383
+LH++ +P IAH DLK NIL+ ++D G+A + Q +G
Sbjct: 148 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL-DVGNNPR 206
Query: 384 -GTTGYIAPEYGMGHEVS-----SYG--DVYSFGILLLEM 415
GT Y+APE + + SY D+++FG++L E+
Sbjct: 207 VGTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 25/238 (10%)
Query: 198 RMLYNATKG-FSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVFNV-LHHDA 245
R+ Y+A+K F + L +G G FG V + F + VAVK+ H
Sbjct: 15 RLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 74
Query: 246 SKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEE 304
++ E ++ +I H N+V + AC+ G +V EF G+L ++ E
Sbjct: 75 HRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNE 130
Query: 305 DKRHKAPGNLN----SLKRL-NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTA 359
+K P +L +L+ L + VA +++L H DL NILL ++
Sbjct: 131 FVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVV 187
Query: 360 YVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ DFG+AR + + R ++APE + DV+SFG+LL E+F+
Sbjct: 188 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 36/220 (16%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEV--TRNIRHRNLVKVFTA 270
+G G +G V++G VAVK+F+ KS+ E E+ T +RH N++ F A
Sbjct: 16 VGKGRYGEVWRGSW--QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILG-FIA 69
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ L+ + GSL +++ T L+++ L I + +A L
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----------LDTVSCLRIVLSIASGL 118
Query: 331 KYLHLDC-----QPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE-- 383
+LH++ +P IAH DLK NIL+ ++D G+A + Q +G
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL-DVGNNPR 177
Query: 384 -GTTGYIAPEYGMGHEVS-----SYG--DVYSFGILLLEM 415
GT Y+APE + + SY D+++FG++L E+
Sbjct: 178 VGTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 106/277 (38%), Gaps = 49/277 (17%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVT-----R 257
AT + IG G +G+VYK S VA+K V + + + EV
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 258 NIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
H N+V++ C+ LV+E + + L ++ DK P L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL------DK--APPPGLPAE 112
Query: 318 KRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQT 377
++ L +LH +C I H DLKP NIL+ T ++DFG+AR Q
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QM 166
Query: 378 RSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMF--------------------- 416
V T Y APE + ++ D++S G + EMF
Sbjct: 167 ALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL 226
Query: 417 TGLRPSDDMFKDNLNLRNC--------VKSALPERAE 445
GL P DD +D R V+S +PE E
Sbjct: 227 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEE 263
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGV 382
A +V L+YLH I + DLKP NILLD ++DFG A+++ + +
Sbjct: 112 AAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-----TYXL 163
Query: 383 EGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDD 424
GT YIAPE + D +SFGIL+ EM G P D
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 205
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG G+ G V + S VAVK ++ + E + R+ +H N+V+++ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 139
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ D +V EF+ G+L + I + +N + + + V L
Sbjct: 140 ---YLVGDELWVVMEFLEGGALTD----IVTHTR-------MNEEQIAAVCLAVLQALSV 185
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
LH + H D+K +ILL + +SDFG + + E R + GT ++APE
Sbjct: 186 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPE 240
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLRP--------SDDMFKDNLNLR 433
D++S GI+++EM G P + M +DNL R
Sbjct: 241 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 289
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 209 SENLIGAGNFGSVYKGILFEST---TAVAVKVFN-VLHHDASKSFAVECEVTRNIRHRNL 264
S+ +IG G+FG VY G + A+K + + ++F E + R + H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL-NIA 323
+ A G+ ++ +M +G L +++ ++P ++K L +
Sbjct: 85 L----ALIGIMLPPEGLPHVLLPYMCHGDLLQFI----------RSPQRNPTVKDLISFG 130
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG-- 381
+ VA ++YL + H DL N +LD+ T V+DFG+AR + D + S+
Sbjct: 131 LQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR--DILDREYYSVQQH 185
Query: 382 --VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ A E + ++ DV+SFG+LL E+ T
Sbjct: 186 RHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNL 264
K ++ IG G G+VY + + VA++ N+ + E V R ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
V + + D +V E++A GSL + + ++ G + ++ R
Sbjct: 80 VNYLDS-----YLVGDELWVVMEYLAGGSLTDVVTETCMDE------GQIAAVCR----- 123
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ L++LH + + H D+K NILL + + ++DFG + EQ++ + G
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA--QITPEQSKRSXMVG 178
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
T ++APE D++S GI+ +EM G P
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNL 264
K ++ IG G G+VY + + VA++ N+ + E V R ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
V + + D +V E++A GSL + + ++ G + ++ R
Sbjct: 80 VNYLDS-----YLVGDELWVVMEYLAGGSLTDVVTETCMDE------GQIAAVCR----- 123
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ L++LH + + H D+K NILL + + ++DFG + EQ++ + G
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA--QITPEQSKRSTMVG 178
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
T ++APE D++S GI+ +EM G P
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNL 264
K ++ IG G G+VY + + VA++ N+ + E V R ++ N+
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
V + + D +V E++A GSL + + ++ G + ++ R
Sbjct: 81 VNYLDS-----YLVGDELWVVMEYLAGGSLTDVVTETCMDE------GQIAAVCR----- 124
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ L++LH + + H D+K NILL + + ++DFG + EQ++ + G
Sbjct: 125 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA--QITPEQSKRSXMVG 179
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
T ++APE D++S GI+ +EM G P
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 213 IGAGNFGSVYK----GILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNI-RHRN 263
+G G FG V GI + +L DA++ E E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ + AC+ Q +V E+ + G+L E++ + N +++
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 324 IDVACVLKYL----HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
V+C + +L Q I H DL N+L+ + ++DFG+AR + D ++
Sbjct: 158 DLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++APE + DV+SFG+L+ E+FT
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 33/225 (14%)
Query: 213 IGAGNFGSVYK----GILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNI-RHRN 263
+G G FG V GI + +L DA++ E E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPG-----NLNSLK 318
++ + AC+ Q +V E+ + G+L E++ + + PG ++N +
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYL-------RARRPPGMEXSYDINRVP 150
Query: 319 RLNIAID--VACVLKYL----HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEA 372
+ V+C + +L Q I H DL N+L+ + ++DFG+AR +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 373 ADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
D ++ ++APE + DV+SFG+L+ E+FT
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNL 264
K ++ IG G G+VY + + VA++ N+ + E V R ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
V + + D +V E++A GSL + + ++ G + ++ R
Sbjct: 80 VNYLDS-----YLVGDELWVVMEYLAGGSLTDVVTETCMDE------GQIAAVCR----- 123
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ L++LH + + H D+K NILL + + ++DFG + EQ++ + G
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA--QITPEQSKRSEMVG 178
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
T ++APE D++S GI+ +EM G P
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRNLVKVFT 269
+G G FG+VY ++ +A+KV + E E+ ++RH N+++++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
F L+ EF G L +E ++H G + + ++A
Sbjct: 83 Y-----FHDRKRIYLMLEFAPRGEL-------YKELQKH---GRFDEQRSATFMEELADA 127
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
L Y H + + H D+KP N+L+ + ++DFG + + A + R + GT Y+
Sbjct: 128 LHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMC--GTLDYL 180
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSD 423
PE G D++ G+L E G+ P D
Sbjct: 181 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G + + + +++ D++ A
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA--------- 116
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 117 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 168
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 169 XXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 106/277 (38%), Gaps = 49/277 (17%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVT-----R 257
AT + IG G +G+VYK S VA+K V + + + EV
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 258 NIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
H N+V++ C+ LV+E + + L ++ DK P L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL------DK--APPPGLPAE 112
Query: 318 KRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQT 377
++ L +LH +C I H DLKP NIL+ T ++DFG+AR Q
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QM 166
Query: 378 RSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMF--------------------- 416
V T Y APE + ++ D++S G + EMF
Sbjct: 167 ALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL 226
Query: 417 TGLRPSDDMFKDNLNLRNC--------VKSALPERAE 445
GL P DD +D R V+S +PE E
Sbjct: 227 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEE 263
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRNLVKVFT 269
+G G FG+VY ++ +A+KV + E E+ ++RH N+++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
F L+ EF G L +E ++H G + + ++A
Sbjct: 82 Y-----FHDRKRIYLMLEFAPRGEL-------YKELQKH---GRFDEQRSATFMEELADA 126
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
L Y H + + H D+KP N+L+ + ++DFG + + A + R + GT Y+
Sbjct: 127 LHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMC--GTLDYL 179
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSD 423
PE G D++ G+L E G+ P D
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 213 IGAGNFGSVYKG-----ILFESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G I E+ T VAVK N + F E V + ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRH--KAPGNLNSLKRLNIAI 324
+ GV +G +V E MA+G L+ ++ + E + + + P L + + +A
Sbjct: 82 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM--IQMAA 134
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ H DL N ++ + T + DFG+ R + D +
Sbjct: 135 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL 191
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEM 415
++APE ++ D++SFG++L E+
Sbjct: 192 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G+ E T VA+K N + F E V + ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK--APGNLNSLKRLNIAI 324
+ GV QG ++ E M G L+ ++ + + AP +L+ K + +A
Sbjct: 93 LL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS--KMIQMAG 145
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ + H DL N ++ ++ T + DFG+ R + D +
Sbjct: 146 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 202
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+++PE ++Y DV+SFG++L E+ T
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 213 IGAGNFGSVYKG-----ILFESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G I E+ T VAVK N + F E V + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRH--KAPGNLNSLKRLNIAI 324
+ GV +G +V E MA+G L+ ++ + E + + + P L + + +A
Sbjct: 85 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM--IQMAA 137
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ H DL N ++ + T + DFG+ R + D +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL 194
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEM 415
++APE ++ D++SFG++L E+
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 29/226 (12%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF--NVLHHDASKSFAVECEVTRNIRHR 262
K + IG G F V + VA+K+ N L D + E E +N+RH+
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQ 68
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
++ +++ + + +V E+ G L ++ I +D+ L+ + +
Sbjct: 69 HICQLYHV-----LETANKIFMVLEYCPGGELFDY---IISQDR-------LSEEETRVV 113
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGV 382
+ + Y+H AH DLKP N+L D+ + DFG+ A + + +
Sbjct: 114 FRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLC----AKPKGNKDYHL 166
Query: 383 E---GTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRPSDD 424
+ G+ Y APE G + S DV+S GILL + G P DD
Sbjct: 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRNLVKVFT 269
+G G FG+VY ++ +A+KV + E E+ ++RH N+++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
F L+ EF G L +E ++H G + + ++A
Sbjct: 82 Y-----FHDRKRIYLMLEFAPRGEL-------YKELQKH---GRFDEQRSATFMEELADA 126
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
L Y H + + H D+KP N+L+ + ++DFG + + A + R + GT Y+
Sbjct: 127 LHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMC--GTLDYL 179
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSD 423
PE G D++ G+L E G+ P D
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG G+ G V + S VAVK ++ + E + R+ +H N+V+++ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 96
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ D +V EF+ G+L + I + +N + + + V L
Sbjct: 97 ---YLVGDELWVVMEFLEGGALTD----IVTHTR-------MNEEQIAAVCLAVLQALSV 142
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
LH + H D+K +ILL + +SDFG + + E R + GT ++APE
Sbjct: 143 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPE 197
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLRP--------SDDMFKDNLNLR 433
D++S GI+++EM G P + M +DNL R
Sbjct: 198 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 246
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 213 IGAGNFGSVYKG-----ILFESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G I E+ T VAVK N + F E V + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRH--KAPGNLNSLKRLNIAI 324
+ GV +G +V E MA+G L+ ++ + E + + + P L + + +A
Sbjct: 85 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM--IQMAA 137
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ H DL N ++ + T + DFG+ R + D +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL 194
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEM 415
++APE ++ D++SFG++L E+
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNIRHRNLVKVF 268
+G+G FG V+ L E ++ +V ++ D S+ E EV +++ H N++K+F
Sbjct: 30 LGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIF 86
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKA--PGNLNSLKRLNIAIDV 326
F+ +V E G L + I R KA G + L + +
Sbjct: 87 EV-----FEDYHNMYIVMETCEGGEL---LERIVSAQARGKALSEGYVAELMK-----QM 133
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLDD---EMTAYVSDFGIARFLEAADEQTRSIGVE 383
L Y H + H DLKP NIL D + DFG+A ++ + T +
Sbjct: 134 MNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA--- 187
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y+APE +V+ D++S G+++ + TG P
Sbjct: 188 GTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 213 IGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKV 267
+G G+FG V + + +TT VA+K+ N + D E R +RH +++K+
Sbjct: 21 LGEGSFGKV--KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
+ + D +V E+ N E I + DK ++ + +
Sbjct: 79 YDV-----IKSKDEIIMVIEYAGN----ELFDYIVQRDK-------MSEQEARRFFQQII 122
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
++Y H + I H DLKP N+LLD+ + ++DFG++ + + S G+
Sbjct: 123 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 176
Query: 388 YIAPEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSDD 424
Y APE G + DV+S G++L M P DD
Sbjct: 177 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 213 IGAGNFGSVYKGILF-----ESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G+ E T VA+K N + F E V + ++V+
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK--APGNLNSLKRLNIAI 324
+ GV QG ++ E M G L+ ++ + + AP +L+ K + +A
Sbjct: 83 LL----GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS--KMIQMAG 135
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ + H DL N ++ ++ T + DFG+ R + D +
Sbjct: 136 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 192
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+++PE ++Y DV+SFG++L E+ T
Sbjct: 193 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 31/232 (13%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV----EC 253
R++YN + F ++L+G G +G V + VA+K FA+ E
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREI 60
Query: 254 EVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGN 313
++ ++ +H N++ +F F+ + ++ E M +H + +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVI----------S 105
Query: 314 LNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE-- 371
L +I + L+ + + + H DLKPSN+L++ V DFG+AR ++
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165
Query: 372 AAD------EQTRSIGVEGTTGYIAPEYGM-GHEVSSYGDVYSFGILLLEMF 416
AAD +Q+ + T Y APE + + S DV+S G +L E+F
Sbjct: 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 106/250 (42%), Gaps = 41/250 (16%)
Query: 198 RMLYNATKGFSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDAS 246
++ YN F NL +GAG FG V + F ++ VAVK+ + H D
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 247 KSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEED 305
++ E ++ ++ +H N+V + AC+ G ++ E+ G L ++
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACT----HGGPV-LVITEYCCYGDLLNFL------- 141
Query: 306 KRHKAPG-------------NLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNIL 352
+R + PG L+S L+ + VA + +L H D+ N+L
Sbjct: 142 RRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVL 198
Query: 353 LDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILL 412
L + A + DFG+AR + ++APE + DV+S+GILL
Sbjct: 199 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 258
Query: 413 LEMFT-GLRP 421
E+F+ GL P
Sbjct: 259 WEIFSLGLNP 268
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG G+ G V + S VAVK ++ + E + R+ +H N+V+++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 94
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ D +V EF+ G+L + I + +N + + + V L
Sbjct: 95 ---YLVGDELWVVMEFLEGGALTD----IVTHTR-------MNEEQIAAVCLAVLQALSV 140
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
LH + H D+K +ILL + +SDFG + + E R + GT ++APE
Sbjct: 141 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPE 195
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLRP--------SDDMFKDNLNLR 433
D++S GI+++EM G P + M +DNL R
Sbjct: 196 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 244
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 43/230 (18%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVK-VFNVLHH--DASKSFAVECEVTRNIRHRNLVKVFT 269
+G G +G V+K I + VAVK +F+ + DA ++F +T H N+V +
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 270 ACSGVDFQGNDFKA-LVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
ND LV+++M E +H + + L + + + +
Sbjct: 77 VLRA----DNDRDVYLVFDYM-----ETDLHAVIRANI-------LEPVHKQYVVYQLIK 120
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR-FLEAA-------------- 373
V+KYLH + H D+KPSNILL+ E V+DFG++R F+
Sbjct: 121 VIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 374 ----DEQTRSIGVEGTTGYIAPEYGMGHEVSSYG-DVYSFGILLLEMFTG 418
D+Q T Y APE +G + G D++S G +L E+ G
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 213 IGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKV 267
+G G+FG V + + +TT VA+K+ N + D E R +RH +++K+
Sbjct: 22 LGEGSFGKV--KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
+ + D +V E+ N E I + DK ++ + +
Sbjct: 80 YDV-----IKSKDEIIMVIEYAGN----ELFDYIVQRDK-------MSEQEARRFFQQII 123
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
++Y H + I H DLKP N+LLD+ + ++DFG++ + + S G+
Sbjct: 124 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 177
Query: 388 YIAPEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSDD 424
Y APE G + DV+S G++L M P DD
Sbjct: 178 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTAC 271
++G G +G VY G + +A+K S+ E + ++++H+N+V+ +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS- 87
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
F N F + E + GSL + + P N + LK
Sbjct: 88 ----FSENGFIKIFMEQVPGGSLSALL-------RSKWGPLKDNEQTIGFYTKQILEGLK 136
Query: 332 YLHLDCQPPIAHCDLKPSNILLDD-EMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
YLH D Q I H D+K N+L++ +SDFG ++ L + T + GT Y+A
Sbjct: 137 YLH-DNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQYMA 191
Query: 391 PEYGMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
PE + YG D++S G ++EM TG P
Sbjct: 192 PEI-IDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 27/215 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKVFT 269
IG G+FG V ++ A+K N + + ++ E ++ + + H LV ++
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
+ FQ + +V + + G L R+ N++ K + + + +
Sbjct: 83 S-----FQDEEDMFMVVDLLLGGDL------------RYHLQQNVH-FKEETVKLFICEL 124
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
+ L I H D+KP NILLD+ +++DF IA L +T+ + GT Y+
Sbjct: 125 VMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITTMAGTKPYM 181
Query: 390 APEYGMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
APE + + Y D +S G+ E+ G RP
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 94/229 (41%), Gaps = 29/229 (12%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+IG G+FG V AVKV +L K E RN+ +N+ F
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSE----RNVLLKNVKHPF 100
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
FQ D V +++ G L + H E L R A ++A
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGEL--FYHLQRER-------CFLEPRARF-YAAEIAS 150
Query: 329 VLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
L YLH L+ I + DLKP NILLD + ++DFG+ + E + + + GT
Sbjct: 151 ALGYLHSLN----IVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPE 204
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP-----SDDMFKDNLN 431
Y+APE D + G +L EM GL P + +M+ + LN
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN 253
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 213 IGAGNFGSVYKGI--LFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRNIRHRNLVKVFT 269
+G GNFGSV +G+ + + VA+KV A ++ E ++ + + +V++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAP-GNLNSLKRLNIAIDVAC 328
C LV E G L +++ KR + P N+ L V+
Sbjct: 78 VCQAEALM------LVMEMAGGGPLHKFL-----VGKREEIPVSNVAELLH-----QVSM 121
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADE--QTRSIGVEGTT 386
+KYL + H DL N+LL + A +SDFG+++ L A D RS G +
Sbjct: 122 GMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-KWPL 177
Query: 387 GYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE + SS DV+S+G+ + E + G +P M
Sbjct: 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 213 IGAGNFGSVYK----GILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNI-RHRN 263
+G G FG V GI + +L DA++ E E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ + AC+ Q +V E+ + G+L E++ + N +++
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 324 IDVACVLKYL----HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
V+C + +L Q I H DL N+L+ + ++DFG+AR + D ++
Sbjct: 158 DLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++APE + DV+SFG+L+ E+FT
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 213 IGAGNFGSVYK----GILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNI-RHRN 263
+G G FG V GI + +L DA++ E E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ + AC+ Q +V E+ + G+L E++ + N +++
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 324 IDVACVLKYL----HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
V+C + +L Q I H DL N+L+ + ++DFG+AR + D ++
Sbjct: 158 DLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++APE + DV+SFG+L+ E+FT
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 213 IGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKV 267
+G G+FG V + + +TT VA+K+ N + D E R +RH +++K+
Sbjct: 12 LGEGSFGKV--KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
+ + D +V E+ N E I + DK ++ + +
Sbjct: 70 YDV-----IKSKDEIIMVIEYAGN----ELFDYIVQRDK-------MSEQEARRFFQQII 113
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
++Y H + I H DLKP N+LLD+ + ++DFG++ + + S G+
Sbjct: 114 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 167
Query: 388 YIAPEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSDD 424
Y APE G + DV+S G++L M P DD
Sbjct: 168 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 107/280 (38%), Gaps = 52/280 (18%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-----SFAVECEVTR 257
AT + IG G +G+VYK S VA+K V + S E + R
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 258 NIR---HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNL 314
+ H N+V++ C+ LV+E + + L ++ DK P L
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL------DK--APPPGL 117
Query: 315 NSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD 374
+ ++ L +LH +C I H DLKP NIL+ T ++DFG+AR
Sbjct: 118 PAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY-- 172
Query: 375 EQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMF------------------ 416
Q V T Y APE + ++ D++S G + EMF
Sbjct: 173 -QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 231
Query: 417 ---TGLRPSDDMFKDNLNLRNC--------VKSALPERAE 445
GL P DD +D R V+S +PE E
Sbjct: 232 FDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEE 271
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 213 IGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKV 267
+G G+FG V + + +TT VA+K+ N + D E R +RH +++K+
Sbjct: 16 LGEGSFGKV--KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
+ + D +V E+ N E I + DK ++ + +
Sbjct: 74 YDV-----IKSKDEIIMVIEYAGN----ELFDYIVQRDK-------MSEQEARRFFQQII 117
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
++Y H + I H DLKP N+LLD+ + ++DFG++ + + S G+
Sbjct: 118 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 171
Query: 388 YIAPEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSDD 424
Y APE G + DV+S G++L M P DD
Sbjct: 172 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 213 IGAGNFGSVYK----GILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNI-RHRN 263
+G G FG V GI + +L DA++ E E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ + AC+ Q +V E+ + G+L E++ + N +++
Sbjct: 103 IITLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 324 IDVACVLKYL----HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
V+C + +L Q I H DL N+L+ + ++DFG+AR + D ++
Sbjct: 158 DLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++APE + DV+SFG+L+ E+FT
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 213 IGAGNFGSVYK----GILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNI-RHRN 263
+G G FG V GI + +L DA++ E E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ + AC+ Q +V E+ + G+L E++ + N +++
Sbjct: 103 IIHLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 324 IDVACVLKYL----HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
V+C + +L Q I H DL N+L+ + ++DFG+AR + D ++
Sbjct: 158 DLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++APE + DV+SFG+L+ E+FT
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 112
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 113 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----CHAPSSRR 164
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 165 TTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 213 IGAGNFGSVYK----GILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNI-RHRN 263
+G G FG V GI + +L DA++ E E+ + I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ + AC+ Q +V E+ + G+L E++ + N +++
Sbjct: 149 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 324 IDVACVLKYL----HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
V+C + +L Q I H DL N+L+ + ++DFG+AR + D ++
Sbjct: 204 DLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++APE + DV+SFG+L+ E+FT
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 213 IGAGNFGSVYK----GILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNI-RHRN 263
+G G FG V GI + +L DA++ E E+ + I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ + AC+ Q +V E+ + G+L E++ + N +++
Sbjct: 90 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 324 IDVACVLKYL----HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
V+C + +L Q I H DL N+L+ + ++DFG+AR + D ++
Sbjct: 145 DLVSCTYQLARGMEYLASQKCI-HRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++APE + DV+SFG+L+ E+FT
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G + + + +++ D++ A
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA--------- 116
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 117 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 168
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 169 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 26/244 (10%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY S +A+KV + E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F + L+ E+ G++ + +++ D++ A
Sbjct: 66 RHPNILRLYGY-----FHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 111
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 112 -TYITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 163
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSD-DMFKDNLNLRNCVKS 438
+ GT Y+ PE G D++S G+L E G P + + ++D + V+
Sbjct: 164 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEF 223
Query: 439 ALPE 442
P+
Sbjct: 224 TFPD 227
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG G+ G V + S VAVK ++ + E + R+ +H N+V+++ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 89
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ D +V EF+ G+L + I + +N + + + V L
Sbjct: 90 ---YLVGDELWVVMEFLEGGALTD----IVTHTR-------MNEEQIAAVCLAVLQALSV 135
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
LH + H D+K +ILL + +SDFG + + E R + GT ++APE
Sbjct: 136 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPE 190
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLRP--------SDDMFKDNLNLR 433
D++S GI+++EM G P + M +DNL R
Sbjct: 191 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 239
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG G+ G V + S VAVK ++ + E + R+ +H N+V+++ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 85
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ D +V EF+ G+L + I + +N + + + V L
Sbjct: 86 ---YLVGDELWVVMEFLEGGALTD----IVTHTR-------MNEEQIAAVCLAVLQALSV 131
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
LH + H D+K +ILL + +SDFG + + E R + GT ++APE
Sbjct: 132 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPE 186
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLRP--------SDDMFKDNLNLR 433
D++S GI+++EM G P + M +DNL R
Sbjct: 187 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 235
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 213 IGAGNFGSVYK----GILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNI-RHRN 263
+G G FG V GI + +L DA++ E E+ + I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ + AC+ Q +V E+ + G+L E++ + N +++
Sbjct: 95 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 324 IDVACVLKYL----HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
V+C + +L Q I H DL N+L+ + ++DFG+AR + D ++
Sbjct: 150 DLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++APE + DV+SFG+L+ E+FT
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 213 IGAGNFGSVYKG-----ILFESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G I E+ T VAVK N + F E V + ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRH--KAPGNLNSLKRLNIAI 324
+ GV +G +V E MA+G L+ ++ + E + + + P L + + +A
Sbjct: 84 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM--IQMAA 136
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ H DL N ++ + T + DFG+ R + D +
Sbjct: 137 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL 193
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEM 415
++APE ++ D++SFG++L E+
Sbjct: 194 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 213 IGAGNFGSVYK----GILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNI-RHRN 263
+G G FG V GI + +L DA++ E E+ + I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ + AC+ Q +V E+ + G+L E++ + N +++
Sbjct: 92 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 324 IDVACVLKYL----HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
V+C + +L Q I H DL N+L+ + ++DFG+AR + D ++
Sbjct: 147 DLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++APE + DV+SFG+L+ E+FT
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 34/228 (14%)
Query: 199 MLYNATKGFSSENLIGAGNFGSVYKGILFESTT---AVAVKVFNV--LHHDASKSFAVEC 253
+ + + + + IG G+FG K IL +ST +K N+ + + E
Sbjct: 18 LYFQSMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREV 74
Query: 254 EVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHP----ITEEDKRHK 309
V N++H N+V+ + F+ N +V ++ G L + ++ + +ED+
Sbjct: 75 AVLANMKHPNIVQYRES-----FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI-- 127
Query: 310 APGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
L+ + + LK++H I H D+K NI L + T + DFGIAR
Sbjct: 128 ----------LDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARV 174
Query: 370 LEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
L + E R+ GT Y++PE ++ D+++ G +L E+ T
Sbjct: 175 LNSTVELARA--CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 87/212 (41%), Gaps = 25/212 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRNLVKVFT 269
+G G FG+VY +S +A+KV + E E+ ++RH N+++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
F L+ E+ G++ + ++ D++ A ++A
Sbjct: 80 Y-----FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA----------TYITELANA 124
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
L Y H + H D+KP N+LL ++DFG + +R + GT Y+
Sbjct: 125 LSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS----VHAPSSRRTTLCGTLDYL 177
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
PE G D++S G+L E G+ P
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTAC 271
++G G +G VY G + +A+K S+ E + ++++H+N+V+ +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS- 73
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
F N F + E + GSL + + P N + LK
Sbjct: 74 ----FSENGFIKIFMEQVPGGSLSALL-------RSKWGPLKDNEQTIGFYTKQILEGLK 122
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAY-VSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
YLH D Q I H D+K N+L++ +SDFG ++ L + T + GT Y+A
Sbjct: 123 YLH-DNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQYMA 177
Query: 391 PEYGMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
PE + YG D++S G ++EM TG P
Sbjct: 178 PEI-IDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 92 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 137
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 138 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 189
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 190 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 23/239 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG G+ G V + VAVK ++ + E + R+ H N+V ++++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS-- 110
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
+ D +V EF+ G+L + + +N + + + V L Y
Sbjct: 111 ---YLVGDELWVVMEFLEGGALTDIV-----------THTRMNEEQIATVCLSVLRALSY 156
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
LH + H D+K +ILL + +SDFG + + E + + GT ++APE
Sbjct: 157 LH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFC--AQVSKEVPKRKXLVGTPYWMAPE 211
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKSALPERAEEIRASS 451
+ D++S GI+++EM G P + + L ++ +LP R +++ S
Sbjct: 212 VISRLPYGTEVDIWSLGIMVIEMIDGEPPYFN--EPPLQAMRRIRDSLPPRVKDLHKVS 268
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 116
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 117 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 168
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 169 TTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 33/234 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
IG G F V + + + A K+ N L + E + R ++H N+V++ +
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
S F LV++ + G L E ++ + + + A C+
Sbjct: 72 ISE-----EGFHYLVFDLVTGGELFE----------------DIVAREYYSEADASHCIQ 110
Query: 331 KYLH--LDC-QPPIAHCDLKPSNILLDDE---MTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ L L C Q + H DLKP N+LL + ++DFG+A +E +Q G G
Sbjct: 111 QILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAG 168
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKS 438
T GY++PE D+++ G++L + G P D +D L +K+
Sbjct: 169 TPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWD--EDQHKLYQQIKA 220
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 111
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 112 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 163
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 164 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 111
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 112 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 163
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 164 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNL 264
K ++ IG G G+VY + + VA++ N+ + E V R ++ N+
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
V + + D +V E++A GSL + + ++ G + ++ R
Sbjct: 81 VNYLDS-----YLVGDELWVVMEYLAGGSLTDVVTETCMDE------GQIAAVCR----- 124
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ L++LH + + H ++K NILL + + ++DFG + EQ++ + G
Sbjct: 125 ECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCA--QITPEQSKRSTMVG 179
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
T ++APE D++S GI+ +EM G P
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 112
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 113 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 164
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 213 IGAGNFGSVYKG-----ILFESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G I E+ T VAVK N + F E V + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRH--KAPGNLNSLKRLNIAI 324
+ GV +G +V E MA+G L+ ++ + E + + + P L + + +A
Sbjct: 85 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM--IQMAA 137
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ H DL N ++ + T + DFG+ R + D +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL 194
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEM 415
++APE ++ D++SFG++L E+
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 114
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 115 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 166
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 167 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 83 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 128
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 129 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 180
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 181 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 31/232 (13%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV----EC 253
R++YN + F ++L+G G +G V + VA+K FA+ E
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREI 60
Query: 254 EVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGN 313
++ ++ +H N++ +F F+ + ++ E M +H + +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVI----------S 105
Query: 314 LNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE-- 371
L +I + L+ + + + H DLKPSN+L++ V DFG+AR ++
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165
Query: 372 AAD------EQTRSIGVEGTTGYIAPEYGM-GHEVSSYGDVYSFGILLLEMF 416
AAD +Q+ T Y APE + + S DV+S G +L E+F
Sbjct: 166 AADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 25/241 (10%)
Query: 198 RMLYNATKGFSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDAS 246
++ YN F NL +GAG FG V + F ++ VAVK+ + H D
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 247 KSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHP---IT 302
++ E ++ ++ +H N+V + AC+ G ++ E+ G L ++ +
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKSRVL 148
Query: 303 EEDKRHK-APGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
E D A L++ L+ + VA + +L H D+ N+LL + A +
Sbjct: 149 ETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKI 205
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLR 420
DFG+AR + ++APE + DV+S+GILL E+F+ GL
Sbjct: 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265
Query: 421 P 421
P
Sbjct: 266 P 266
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 19/218 (8%)
Query: 213 IGAGNFGSVYK----GILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNI-RHRN 263
+G G FG V GI + +L DA++ E E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ + AC+ Q +V E+ + G+L E++ + N +++
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 324 IDVACVLKYL----HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
V+C + +L Q I H DL N+L+ + ++DFG+AR + D +
Sbjct: 158 DLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++APE + DV+SFG+L+ E+FT
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 111
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 112 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 163
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 164 TELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 114
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 115 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 166
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 97/234 (41%), Gaps = 18/234 (7%)
Query: 198 RMLYNATKG-FSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVFNV-LHHDA 245
R+ Y+A+K F + L +G G FG V + F + VAVK+ H
Sbjct: 16 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSE 75
Query: 246 SKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEE 304
++ E ++ +I H N+V + AC+ G +V EF G+L ++ E
Sbjct: 76 HRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNE 131
Query: 305 DKRHKAPGNLNSLKRLNIAIDVAC-VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSD 363
+K L I + V K + H DL NILL ++ + D
Sbjct: 132 FVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICD 191
Query: 364 FGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
FG+AR + + R ++APE + DV+SFG+LL E+F+
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 116
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 117 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 168
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 169 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 20/236 (8%)
Query: 198 RMLYNATKG-FSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVFNV-LHHDA 245
R+ Y+A+K F + L +G G FG V + F + VAVK+ H
Sbjct: 14 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 73
Query: 246 SKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEE 304
++ E ++ +I H N+V + AC+ G +V EF G+L ++ E
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNE 129
Query: 305 DKRHK-APGNL--NSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+K AP +L + L ++ V K + H DL NILL ++ +
Sbjct: 130 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
DFG+AR + + R ++APE + DV+SFG+LL E+F+
Sbjct: 190 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 116
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 117 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 168
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 169 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 111
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 112 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 163
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 164 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 25/212 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRNLVKVFT 269
+G G FG+VY +S +A+KV + E E+ ++RH N+++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
F L+ E+ G++ + ++ D++ A ++A
Sbjct: 80 Y-----FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA----------TYITELANA 124
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
L Y H + H D+KP N+LL ++DFG + ++ T + GT Y+
Sbjct: 125 LSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT----LCGTLDYL 177
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
PE G D++S G+L E G+ P
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 92 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 137
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 138 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 189
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 190 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G G F ++ ++ A K+ +L + ++E + R++ H+++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
F+ NDF +V E SL E +H KR KA + L I + C
Sbjct: 84 GF-----FEDNDFVFVVLELCRRRSLLE-LH------KRRKALTEPEARYYLR-QIVLGC 130
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+YLH + + H DLK N+ L++++ + DFG+A +E E+ +++ GT Y
Sbjct: 131 --QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNY 183
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
IAPE S DV+S G ++ + G P
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G G F ++ ++ A K+ +L + ++E + R++ H+++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
F+ NDF +V E SL E +H KR KA + L I + C
Sbjct: 84 GF-----FEDNDFVFVVLELCRRRSLLE-LH------KRRKALTEPEARYYLR-QIVLGC 130
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+YLH + + H DLK N+ L++++ + DFG+A +E E+ +++ GT Y
Sbjct: 131 --QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNY 183
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
IAPE S DV+S G ++ + G P
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 113
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 114 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 165
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 166 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 20/236 (8%)
Query: 198 RMLYNATKG-FSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVFNV-LHHDA 245
R+ Y+A+K F + L +G G FG V + F + VAVK+ H
Sbjct: 5 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 64
Query: 246 SKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEE 304
++ E ++ +I H N+V + AC+ G +V EF G+L ++ E
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNE 120
Query: 305 DKRHK-APGNL--NSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+K AP +L + L ++ V K + H DL NILL ++ +
Sbjct: 121 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
DFG+AR + + R ++APE + DV+SFG+LL E+F+
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 111
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 112 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 163
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 164 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 106/253 (41%), Gaps = 40/253 (15%)
Query: 198 RMLYNATKGFSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDAS 246
++ YN F NL +GAG FG V + F ++ VAVK+ + H D
Sbjct: 19 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 78
Query: 247 KSFAVECEVTRNI-RHRNLVKVFTACSG----------------VDFQGNDFKALVYEFM 289
++ E ++ ++ +H N+V + AC+ ++F +A++ +
Sbjct: 79 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSL 138
Query: 290 ANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPS 349
A G E + DK P L L L+ + VA + +L H D+
Sbjct: 139 APGQDPEGL------DKEDGRPLELRDL--LHFSSQVAQGMAFL---ASKNCIHRDVAAR 187
Query: 350 NILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFG 409
N+LL + A + DFG+AR + ++APE + DV+S+G
Sbjct: 188 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 247
Query: 410 ILLLEMFT-GLRP 421
ILL E+F+ GL P
Sbjct: 248 ILLWEIFSLGLNP 260
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 33/234 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+G G F V + + + A K+ N L + E + R ++H N+V++ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
S +G+ + L+++ + G L E ++ + + + A C+
Sbjct: 90 ISE---EGHHY--LIFDLVTGGELFE----------------DIVAREYYSEADASHCIQ 128
Query: 331 KYLH--LDC-QPPIAHCDLKPSNILLDDEM---TAYVSDFGIARFLEAADEQTRSIGVEG 384
+ L L C Q + H DLKP N+LL ++ ++DFG+A +E EQ G G
Sbjct: 129 QILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAG 186
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKS 438
T GY++PE D+++ G++L + G P D +D L +K+
Sbjct: 187 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD--EDQHRLYQQIKA 238
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G G F ++ ++ A K+ +L + ++E + R++ H+++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
F+ NDF +V E SL E +H KR KA + L I + C
Sbjct: 88 GF-----FEDNDFVFVVLELCRRRSLLE-LH------KRRKALTEPEARYYLR-QIVLGC 134
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+YLH + + H DLK N+ L++++ + DFG+A +E E+ +++ GT Y
Sbjct: 135 --QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNY 187
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
IAPE S DV+S G ++ + G P
Sbjct: 188 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 70 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 115
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 116 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 167
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 26/239 (10%)
Query: 198 RMLYNATKG-FSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVFNV-LHHDA 245
R+ Y+A+K F + L +G G FG V + F + VAVK+ H
Sbjct: 14 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 73
Query: 246 SKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEE 304
++ E ++ +I H N+V + AC+ G +V EF G+L ++ E
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNE 129
Query: 305 DKRHK-APGNLN----SLKRL-NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT 358
+K AP +L +L+ L + VA +++L H DL NILL ++
Sbjct: 130 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV 186
Query: 359 AYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ DFG+AR + + R ++APE + DV+SFG+LL E+F+
Sbjct: 187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 65 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 110
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 111 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 162
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 163 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 111
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 112 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 163
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 164 TXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 26/239 (10%)
Query: 198 RMLYNATKG-FSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVFNV-LHHDA 245
R+ Y+A+K F + L +G G FG V + F + VAVK+ H
Sbjct: 14 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 73
Query: 246 SKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEE 304
++ E ++ +I H N+V + AC+ G +V EF G+L ++ E
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNE 129
Query: 305 DKRHK-APGNLN----SLKRL-NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT 358
+K AP +L +L+ L + VA +++L H DL NILL ++
Sbjct: 130 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV 186
Query: 359 AYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ DFG+AR + + R ++APE + DV+SFG+LL E+F+
Sbjct: 187 VKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH----DASKSFAV-ECEVTRNIRHRNLVKV 267
IG G++G K + + V+ L + +A K V E + R ++H N+V+
Sbjct: 14 IGTGSYGRCQK---IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
+ +D + N +V E+ G L + T+E + L + +L +A
Sbjct: 71 YDRI--ID-RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA---- 123
Query: 328 CVLKYLHL--DCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
LK H D + H DLKP+N+ LD + + DFG+AR L ++ + GT
Sbjct: 124 --LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV--GT 179
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE + D++S G LL E+ + P
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 92/222 (41%), Gaps = 22/222 (9%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKVF 268
++G G+FG V + A+K+ V+ D + VE V + +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
+C FQ D V E++ G L M+ I + G + + A +++
Sbjct: 86 HSC----FQTVDRLYFVMEYVNGGDL---MYHIQQV-------GKFKEPQAVFYAAEISI 131
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L +LH + I + DLK N++LD E ++DFG+ + TR GT Y
Sbjct: 132 GLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC--GTPDY 186
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNL 430
IAPE D +++G+LL EM G P D +D L
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 228
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 20/236 (8%)
Query: 198 RMLYNATKG-FSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVFNV-LHHDA 245
R+ Y+A+K F + L +G G FG V + F + VAVK+ H
Sbjct: 51 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 110
Query: 246 SKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEE 304
++ E ++ +I H N+V + AC+ G +V EF G+L ++ E
Sbjct: 111 HRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNE 166
Query: 305 DKRHK-APGNL--NSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+K AP +L + L ++ V K + H DL NILL ++ +
Sbjct: 167 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 226
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
DFG+AR + + R ++APE + DV+SFG+LL E+F+
Sbjct: 227 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 112
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + ++ T
Sbjct: 113 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT-- 166
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 167 --LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 24/220 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFN--VLHHDASKSFAVECEVTRNIRHRNL 264
+ + IG GNF V + VAVK+ + L+ + + E + + + H N+
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+F + LV E+ + G + +++ A G + +
Sbjct: 77 VKLFEVI-----ETEKTLYLVMEYASGGEVFDYL----------VAHGRMKEKEARAKFR 121
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ ++Y H Q I H DLK N+LLD +M ++DFG + ++ G
Sbjct: 122 QIVSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC---G 175
Query: 385 TTGYIAPEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSD 423
+ Y APE G + DV+S G++L + +G P D
Sbjct: 176 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 111
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 112 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 163
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 164 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 30/217 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS--KSFAVECEVTRNIRHRNLVKVFTA 270
IG GNF V + VAV++ + ++S + E + + + H N+VK+F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ LV E+ + G + +++ A G + + + +
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYL----------VAHGRMKEKEARAKFRQIVSAV 126
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR---FLEAADEQTRSIGVEGTTG 387
+Y H Q I H DLK N+LLD +M ++DFG + F DE G+
Sbjct: 127 QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC------GSPP 177
Query: 388 YIAPEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSD 423
Y APE G + DV+S G++L + +G P D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS--KSFAVECEVTRNIRHRNLVKVFTA 270
IG GNF V + VAVK+ + ++S + E + + + H N+VK+F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ LV E+ + G + +++ A G + + + +
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYL----------VAHGRMKEKEARAKFRQIVSAV 126
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+Y H Q I H DLK N+LLD +M ++DFG + ++ G+ Y A
Sbjct: 127 QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAA 180
Query: 391 PEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSD 423
PE G + DV+S G++L + +G P D
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 20/236 (8%)
Query: 198 RMLYNATKG-FSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVFNV-LHHDA 245
R+ Y+A+K F + L +G G FG V + F + VAVK+ H
Sbjct: 16 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 75
Query: 246 SKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEE 304
++ E ++ +I H N+V + AC+ G +V EF G+L ++ E
Sbjct: 76 HRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNE 131
Query: 305 DKRHK-APGNL--NSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+K AP +L + L ++ V K + H DL NILL ++ +
Sbjct: 132 FVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 191
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
DFG+AR + + R ++APE + DV+SFG+LL E+F+
Sbjct: 192 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 213 IGAGNFGSVYKGI--LFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRNIRHRNLVKVFT 269
+G GNFGSV +G+ + + VA+KV A ++ E ++ + + +V++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAP-GNLNSLKRLNIAIDVAC 328
C LV E G L +++ KR + P N+ L V+
Sbjct: 404 VCQAEALM------LVMEMAGGGPLHKFL-----VGKREEIPVSNVAELLH-----QVSM 447
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADE--QTRSIGVEGTT 386
+KYL + H +L N+LL + A +SDFG+++ L A D RS G +
Sbjct: 448 GMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-KWPL 503
Query: 387 GYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRPSDDM 425
+ APE + SS DV+S+G+ + E + G +P M
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS--KSFAVECEVTRNIRHRNLVKVFTA 270
IG GNF V + VAVK+ + ++S + E + + + H N+VK+F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ LV E+ + G + +++ A G + + + +
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYL----------VAHGRMKEKEARAKFRQIVSAV 126
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+Y H Q I H DLK N+LLD +M ++DFG + ++ G+ Y A
Sbjct: 127 QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAA 180
Query: 391 PEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSD 423
PE G + DV+S G++L + +G P D
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 114
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 115 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 166
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLVKVFTAC 271
+G G +G VYK + ++ + S A+ E + + + H N+V +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV- 87
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
LV+EFM E+D + N L+ I I + +L+
Sbjct: 88 ----IHSERCLTLVFEFM-------------EKDLKKVLDENKTGLQDSQIKIYLYQLLR 130
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT-GYIA 390
+ Q I H DLKP N+L++ + ++DFG+AR A RS E T Y A
Sbjct: 131 GVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR---AFGIPVRSYTHEVVTLWYRA 187
Query: 391 PEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
P+ MG + S+ D++S G + EM TG
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLVKVFTAC 271
+G G +G VYK + ++ + S A+ E + + + H N+V +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV- 87
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
LV+EFM E+D + N L+ I I + +L+
Sbjct: 88 ----IHSERCLTLVFEFM-------------EKDLKKVLDENKTGLQDSQIKIYLYQLLR 130
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT-GYIA 390
+ Q I H DLKP N+L++ + ++DFG+AR A RS E T Y A
Sbjct: 131 GVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR---AFGIPVRSYTHEVVTLWYRA 187
Query: 391 PEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
P+ MG + S+ D++S G + EM TG
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 114
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 115 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 166
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 167 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 33/234 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+G G F V + + + A K+ N L + E + R ++H N+V++ +
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
S F LV++ + G L E + +E D H L S+
Sbjct: 72 ISE-----EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN--------- 117
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDE---MTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ HL+ I H DLKP N+LL + ++DFG+A +E +Q G G
Sbjct: 118 ----HCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAG 168
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKS 438
T GY++PE D+++ G++L + G P D +D L +K+
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD--EDQHRLYQQIKA 220
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 33/234 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+G G F V + + + A K+ N L + E + R ++H N+V++ +
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
S F LV++ + G L E + +E D H L S+
Sbjct: 72 ISE-----EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN--------- 117
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDE---MTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ HL+ I H DLKP N+LL + ++DFG+A +E +Q G G
Sbjct: 118 ----HCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAG 168
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKS 438
T GY++PE D+++ G++L + G P D +D L +K+
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD--EDQHRLYQQIKA 220
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS--KSFAVECEVTRNIRHRNLVKVFTA 270
IG GNF V + VAVK+ + ++S + E + + + H N+VK+F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ LV E+ + G + +++ A G + + + +
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYL----------VAHGRMKEKEARAKFRQIVSAV 126
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+Y H Q I H DLK N+LLD +M ++DFG + ++ G Y A
Sbjct: 127 QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD---AFCGAPPYAA 180
Query: 391 PEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSD 423
PE G + DV+S G++L + +G P D
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 114
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 115 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 166
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 167 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFN--VLHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
IG GNF V + VA+K+ + L+ + + E + + + H N+VK+F
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ L+ E+ + G + +++ A G + + + + +
Sbjct: 80 I-----ETEKTLYLIMEYASGGEVFDYL----------VAHGRMKEKEARSKFRQIVSAV 124
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIA-RFLEAADEQTRSIGVEGTTGYI 389
+Y H Q I H DLK N+LLD +M ++DFG + F T G+ Y
Sbjct: 125 QYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC----GSPPYA 177
Query: 390 APEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSD 423
APE G + DV+S G++L + +G P D
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 206 GFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLV 265
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 76
Query: 266 KV--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ F SG + K +VY + + E ++ + R K +L + +
Sbjct: 77 RLRYFFYSSG------EKKDVVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVK 125
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGV 382
+ + + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI-- 183
Query: 383 EGTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 184 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 19/218 (8%)
Query: 213 IGAGNFGSVYK----GILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNI-RHRN 263
+G G FG V GI + +L DA++ E E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ + AC+ Q +V + + G+L E++ + N +++
Sbjct: 103 IINLLGACT----QDGPLYVIV-AYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 324 IDVACVLKYL----HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
V+C + +L Q I H DL N+L+ + ++DFG+AR + D ++
Sbjct: 158 DLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++APE + DV+SFG+L+ E+FT
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F IG G+FG V E+ A+K+ D K ++ ++ + + +++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E+M G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F IG G+FG V E+ A+K+ D K ++ ++ + + +++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E+M G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 26/228 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G+G FG V++ + + K N + + E + + H L+ + A
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA-- 116
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV-LK 331
F+ L+ EF++ G L I ED + +N +++ AC LK
Sbjct: 117 ---FEDKYEMVLILEFLSGGEL---FDRIAAEDYKMSEAEVINYMRQ-------ACEGLK 163
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVS--DFGIARFLEAADEQTRSIGVEGTTGYI 389
++H + I H D+KP NI+ + + + V DFG+A L DE + T +
Sbjct: 164 HMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP-DEIVKV--TTATAEFA 217
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFTGLRP--SDDMFKDNLNLRNC 435
APE V Y D+++ G+L + +GL P +D + N++ C
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC 265
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G G F ++ ++ A K+ +L + ++E + R++ H+++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
F+ NDF +V E SL E +H KR KA + L I + C
Sbjct: 108 GF-----FEDNDFVFVVLELCRRRSLLE-LH------KRRKALTEPEARYYLR-QIVLGC 154
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+YLH + + H DLK N+ L++++ + DFG+A +E E+ + + GT Y
Sbjct: 155 --QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNY 207
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
IAPE S DV+S G ++ + G P
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLV 265
F + +GAGN G V+K S +A K+ ++ A ++ + E +V +V
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ A F + ++ E M GSL++ + K G + ++I
Sbjct: 71 GFYGA-----FYSDGEISICMEHMDGGSLDQVL----------KKAGRIPEQILGKVSIA 115
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFL--EAADEQTRSIGVE 383
V L YL + I H D+KPSNIL++ + DFG++ L E A+E
Sbjct: 116 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV------ 167
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDM 425
GT Y++PE G S D++S G+ L+EM G P M
Sbjct: 168 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPM 209
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 20/236 (8%)
Query: 198 RMLYNATKG-FSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVFNV-LHHDA 245
R+ Y+A+K F + L +G G FG V + F + VAVK+ H
Sbjct: 5 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 64
Query: 246 SKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEE 304
++ E ++ +I H N+V + AC+ G ++ EF G+L ++ E
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNE 120
Query: 305 DKRHK-APGNL--NSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+K AP +L + L ++ V K + H DL NILL ++ +
Sbjct: 121 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
DFG+AR + + R ++APE + DV+SFG+LL E+F+
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G G F ++ ++ A K+ +L + ++E + R++ H+++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
F+ NDF +V E SL E +H KR KA + L I + C
Sbjct: 106 GF-----FEDNDFVFVVLELCRRRSLLE-LH------KRRKALTEPEARYYLR-QIVLGC 152
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+YLH + + H DLK N+ L++++ + DFG+A +E E+ + + GT Y
Sbjct: 153 --QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNY 205
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
IAPE S DV+S G ++ + G P
Sbjct: 206 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 30/211 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG VYK E+ A KV + + + VE E+ H +VK+ A
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA-- 76
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC--VL 330
+ + ++ EF G+++ M E D+ P I V C +L
Sbjct: 77 ---YYHDGKLWIMIEFCPGGAVDAIM---LELDRGLTEP-----------QIQVVCRQML 119
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGI-ARFLEAADEQTRSIGVEGTTGYI 389
+ L+ I H DLK N+L+ E ++DFG+ A+ L+ ++ I GT ++
Sbjct: 120 EALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWM 176
Query: 390 APEYGMGHEVSSY-----GDVYSFGILLLEM 415
APE M + D++S GI L+EM
Sbjct: 177 APEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 213 IGAGNFGSVYKG-----ILFESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G I E+ T VAVK N + F E V + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRH--KAPGNLNSLKRLNIAI 324
+ GV +G +V E MA+G L+ ++ + E + + + P L + + +A
Sbjct: 85 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM--IQMAA 137
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR-FLEAADEQTRSIGVE 383
++A + YL+ H DL N ++ + T + DFG+ R E A + G+
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLL 194
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEM 415
++APE ++ D++SFG++L E+
Sbjct: 195 PVR-WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 19/218 (8%)
Query: 213 IGAGNFGSVYK----GILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNI-RHRN 263
+G G FG V GI + +L DA++ E E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ + AC+ Q +V + + G+L E++ + N +++
Sbjct: 103 IINLLGACT----QDGPLYVIV-GYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 324 IDVACVLKYL----HLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
V+C + +L Q I H DL N+L+ + ++DFG+AR + D ++
Sbjct: 158 DLVSCTYQLARGMEYLASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
++APE + DV+SFG+L+ E+FT
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 213 IGAGNFGSVYKG-----ILFESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G I E+ T VAVK N + F E V + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRH--KAPGNLNSLKRLNIAI 324
+ GV +G +V E MA+G L+ ++ + E + + + P L + + +A
Sbjct: 85 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM--IQMAA 137
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ H +L N ++ + T + DFG+ R + D +
Sbjct: 138 EIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL 194
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEM 415
++APE ++ D++SFG++L E+
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 30/211 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG VYK E+ A KV + + + VE E+ H +VK+ A
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA-- 84
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC--VL 330
+ + ++ EF G+++ M E D+ P I V C +L
Sbjct: 85 ---YYHDGKLWIMIEFCPGGAVDAIM---LELDRGLTEP-----------QIQVVCRQML 127
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGI-ARFLEAADEQTRSIGVEGTTGYI 389
+ L+ I H DLK N+L+ E ++DFG+ A+ L+ ++ I GT ++
Sbjct: 128 EALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWM 184
Query: 390 APEYGMGHEVSSY-----GDVYSFGILLLEM 415
APE M + D++S GI L+EM
Sbjct: 185 APEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFN--VLHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
IG GNF V + VA+K+ + L+ + + E + + + H N+VK+F
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ L+ E+ + G + +++ A G + + + + +
Sbjct: 83 -----IETEKTLYLIMEYASGGEVFDYL----------VAHGRMKEKEARSKFRQIVSAV 127
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+Y H Q I H DLK N+LLD +M ++DFG + + G Y A
Sbjct: 128 QYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD---AFCGAPPYAA 181
Query: 391 PEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSD 423
PE G + DV+S G++L + +G P D
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 31/184 (16%)
Query: 248 SFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKR 307
F E ++ +I++ + C G+ D ++YE+M N S+ ++ DK
Sbjct: 89 DFKNELQIITDIKNEYCL----TCEGI-ITNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 308 HKAPGNLNSLKRLNIAIDVACVLK-------YLHLDCQPPIAHCDLKPSNILLDDEMTAY 360
+ + +K C++K Y+H + I H D+KPSNIL+D
Sbjct: 144 YTCFIPIQVIK---------CIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVK 192
Query: 361 VSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFT 417
+SDFG + ++ D++ + G GT ++ PE+ +E S G D++S GI L MF
Sbjct: 193 LSDFGESEYM--VDKKIK--GSRGTYEFMPPEF-FSNESSYNGAKVDIWSLGICLYVMFY 247
Query: 418 GLRP 421
+ P
Sbjct: 248 NVVP 251
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
++ +IG G+FG VY+ L +S VA+K VL A K+ E ++ R + H N+V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 267 V--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+ F SG + K VY + + E ++ + R K +L + + +
Sbjct: 78 LRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVKL 126
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI--- 183
Query: 384 GTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 213 IGAGNFGSVYKG-----ILFESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLVK 266
+G G+FG VY+G I E+ T VAVK N + F E V + ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRH--KAPGNLNSLKRLNIAI 324
+ GV +G +V E MA+G L+ ++ + E + + + P L + + +A
Sbjct: 86 LL----GVVSKGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM--IQMAA 138
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++A + YL+ H +L N ++ + T + DFG+ R + D +
Sbjct: 139 EIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEM 415
++APE ++ D++SFG++L E+
Sbjct: 196 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 83
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 84 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 133
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D++ V+DFG A+ ++ R+
Sbjct: 134 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG-----RTWX 184
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 185 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS--KSFAVECEVTRNIRHRNLVKVFTA 270
IG GNF V + VAV++ + ++S + E + + + H N+VK+F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ LV E+ + G + +++ A G + + + +
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYL----------VAHGRMKEKEARAKFRQIVSAV 126
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+Y H Q I H DLK N+LLD +M ++DFG + ++ G+ Y A
Sbjct: 127 QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAA 180
Query: 391 PEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSD 423
PE G + DV+S G++L + +G P D
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
++ +IG G+FG VY+ L +S VA+K VL A K+ E ++ R + H N+V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 267 V--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+ F SG + K VY + + E ++ + R K +L + + +
Sbjct: 78 LRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVKL 126
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI--- 183
Query: 384 GTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 104/241 (43%), Gaps = 25/241 (10%)
Query: 198 RMLYNATKGFSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVF-NVLHHDAS 246
++ YN F NL +GAG FG V + F ++ VAVK+ + H D
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 247 KSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHP---IT 302
++ E ++ ++ +H N+V + AC+ G ++ E+ G L ++ +
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKSRVL 148
Query: 303 EEDKRHKAPGNLNSLKRL-NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
E D + S + L + + VA + +L H D+ N+LL + A +
Sbjct: 149 ETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKI 205
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLR 420
DFG+AR + ++APE + DV+S+GILL E+F+ GL
Sbjct: 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265
Query: 421 P 421
P
Sbjct: 266 P 266
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 30/217 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS--KSFAVECEVTRNIRHRNLVKVFTA 270
IG GNF V + VAVK+ + ++S + E + + + H N+VK+F
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHP---ITEEDKRHKAPGNLNSLKRLNIAIDVA 327
+ LV E+ + G + +++ + E++ R K +
Sbjct: 75 I-----ETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-------------QIV 116
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
++Y H Q I H DLK N+LLD +M ++DFG + ++ G+
Sbjct: 117 SAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPP 170
Query: 388 YIAPEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSD 423
Y APE G + DV+S G++L + +G P D
Sbjct: 171 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 25/212 (11%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+G G+FG V Y + VAVK +S + E ++ R + H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C QG LV E++ GSL +++ RH ++ + L A +
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLRDYL-------PRH----SIGLAQLLLFAQQIC 127
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
+ YLH H +L N+LLD++ + DFG+A+ + E R + +G +
Sbjct: 128 EGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR-VREDGDSP 183
Query: 388 --YIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE ++ DV+SFG+ L E+ T
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 22/235 (9%)
Query: 198 RMLYNATKG-FSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVFNV-LHHDA 245
R+ Y+A+K F + L +G G FG V + F + VAVK+ H
Sbjct: 14 RLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSE 73
Query: 246 SKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEE 304
++ E ++ +I H N+V + AC+ G +V EF G+L ++ E
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNE 129
Query: 305 DKRHK-APGNLNSLKRL-NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVS 362
+K + +L+ L + VA +++L H DL NILL ++ +
Sbjct: 130 FVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIX 186
Query: 363 DFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
DFG+AR + + R ++APE + DV+SFG+LL E+F+
Sbjct: 187 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 25/212 (11%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+G G+FG V Y + VAVK +S + E ++ R + H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C QG LV E++ GSL +++ RH ++ + L A +
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLRDYL-------PRH----SIGLAQLLLFAQQIC 127
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
+ YLH H +L N+LLD++ + DFG+A+ + E R + +G +
Sbjct: 128 EGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR-VREDGDSP 183
Query: 388 --YIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE ++ DV+SFG+ L E+ T
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLV 265
F + +GAGN G V+K S +A K+ ++ A ++ + E +V +V
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ A F + ++ E M GSL++ + K G + ++I
Sbjct: 130 GFYGA-----FYSDGEISICMEHMDGGSLDQVL----------KKAGRIPEQILGKVSIA 174
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
V L YL + I H D+KPSNIL++ + DFG++ L D S GT
Sbjct: 175 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF--VGT 228
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE G S D++S G+ L+EM G P
Sbjct: 229 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKVF 268
+G G F ++ ++ A K+ +L + ++E + R++ H+++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
F+ NDF +V E SL E +H KR KA + L I + C
Sbjct: 82 GF-----FEDNDFVFVVLELCRRRSLLE-LH------KRRKALTEPEARYYLR-QIVLGC 128
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+YLH + + H DLK N+ L++++ + DFG+A +E E+ + + GT Y
Sbjct: 129 --QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNY 181
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
IAPE S DV+S G ++ + G P
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 21/216 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH----DASKSFAV-ECEVTRNIRHRNLVKV 267
IG G++G K + + V+ L + +A K V E + R ++H N+V+
Sbjct: 14 IGTGSYGRCQK---IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
+ +D + N +V E+ G L + T+E + L + +L +A
Sbjct: 71 YDRI--ID-RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA---- 123
Query: 328 CVLKYLHL--DCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
LK H D + H DLKP+N+ LD + + DFG+AR L ++ GT
Sbjct: 124 --LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV--GT 179
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE + D++S G LL E+ + P
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHH----DASKSFAV-ECEVTRNIRHRNLVKV 267
IG G++G K + + V+ L + +A K V E + R ++H N+V+
Sbjct: 14 IGTGSYGRCQK---IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
+ +D + N +V E+ G L + T+E + L + +L +A
Sbjct: 71 YDRI--ID-RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA---- 123
Query: 328 CVLKYLHL--DCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
LK H D + H DLKP+N+ LD + + DFG+AR L + + + GT
Sbjct: 124 --LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN--HDTSFAKAFVGT 179
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE + D++S G LL E+ + P
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 113
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL +++FG + +R
Sbjct: 114 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRR 165
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 166 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+G G+FG V Y + VAVK +S + E ++ R + H +++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C G LV E++ GSL +++ RH ++ + L A +
Sbjct: 99 KGCCEDA---GAASLQLVMEYVPLGSLRDYL-------PRH----SIGLAQLLLFAQQIC 144
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
+ YLH H DL N+LLD++ + DFG+A+ + E R + +G +
Sbjct: 145 EGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYR-VREDGDSP 200
Query: 388 --YIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE ++ DV+SFG+ L E+ T
Sbjct: 201 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V E+ A+K+ D K ++ ++ + + +++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 26/239 (10%)
Query: 198 RMLYNATKG-FSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVFNV-LHHDA 245
R+ Y+A+K F + L +G G FG V + F + VAVK+ H
Sbjct: 5 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 64
Query: 246 SKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEE 304
++ E ++ +I H N+V + AC+ G ++ EF G+L ++ E
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNE 120
Query: 305 DKRHK-APGNLN----SLKRL-NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT 358
+K AP +L +L+ L + VA +++L H DL NILL ++
Sbjct: 121 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV 177
Query: 359 AYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ DFG+AR + + R ++APE + DV+SFG+LL E+F+
Sbjct: 178 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 26/239 (10%)
Query: 198 RMLYNATKG-FSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVFNV-LHHDA 245
R+ Y+A+K F + L +G G FG V + F + VAVK+ H
Sbjct: 5 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 64
Query: 246 SKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEE 304
++ E ++ +I H N+V + AC+ G ++ EF G+L ++ E
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNE 120
Query: 305 DKRHK-APGNLN----SLKRL-NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT 358
+K AP +L +L+ L + VA +++L H DL NILL ++
Sbjct: 121 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV 177
Query: 359 AYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ DFG+AR + + R ++APE + DV+SFG+LL E+F+
Sbjct: 178 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 97
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 147
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 148 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 198
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAP 311
E + +++ H N++K+F F+ + LV EF G L E + RHK
Sbjct: 96 EISLLKSLDHPNIIKLFDV-----FEDKKYFYLVTEFYEGGELFEQIIN------RHK-- 142
Query: 312 GNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDE---MTAYVSDFGIAR 368
+ NI + + YLH + I H D+KP NILL+++ + + DFG++
Sbjct: 143 --FDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS 197
Query: 369 FLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
F + D + R GT YIAPE + + + DV+S G+++ + G P
Sbjct: 198 FF-SKDYKLRD--RLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 33/216 (15%)
Query: 213 IGAGNFGSVYKGILFE---STTAVAVKVF--NVLHH-DASKSFAVECEVTRNIRHRNLVK 266
+G G+FG V +G T +VAVK +VL +A F E ++ HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
++ + +V E GSL + ++H+ L +L R A+ V
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSL-------LDRLRKHQGHFLLGTLSR--YAVQV 130
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD-----EQTRSIG 381
A + YL H DL N+LL + DFG+ R L D ++ R +
Sbjct: 131 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP 187
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE S D + FG+ L EMFT
Sbjct: 188 F----AWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY +S +A+KV + E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 114
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL +++FG + +R
Sbjct: 115 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRR 166
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 33/216 (15%)
Query: 213 IGAGNFGSVYKGILFE---STTAVAVKVF--NVLHH-DASKSFAVECEVTRNIRHRNLVK 266
+G G+FG V +G T +VAVK +VL +A F E ++ HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
++ + +V E GSL + ++H+ L +L R A+ V
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSL-------LDRLRKHQGHFLLGTLSR--YAVQV 124
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD-----EQTRSIG 381
A + YL H DL N+LL + DFG+ R L D ++ R +
Sbjct: 125 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 181
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE S D + FG+ L EMFT
Sbjct: 182 F----AWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 25/222 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNI 259
A + F +G G FG+VY + +A+KV + E E+ ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 260 RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKR 319
RH N+++++ F L+ E+ G++ + +++ D++ A
Sbjct: 63 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------- 108
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
++A L Y H + H D+KP N+LL ++DFG + +R
Sbjct: 109 -TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRR 160
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+ PE G D++S G+L E G P
Sbjct: 161 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 33/216 (15%)
Query: 213 IGAGNFGSVYKGILFE---STTAVAVKVF--NVLHH-DASKSFAVECEVTRNIRHRNLVK 266
+G G+FG V +G T +VAVK +VL +A F E ++ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
++ + +V E GSL + ++H+ L +L R A+ V
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSL-------LDRLRKHQGHFLLGTLSR--YAVQV 120
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD-----EQTRSIG 381
A + YL H DL N+LL + DFG+ R L D ++ R +
Sbjct: 121 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP 177
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE S D + FG+ L EMFT
Sbjct: 178 F----AWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 99/237 (41%), Gaps = 26/237 (10%)
Query: 198 RMLYNATKG-FSSENL-----IGAGNFGSVYKGILF-----ESTTAVAVKVFNV-LHHDA 245
R+ Y+A+K F + L +G G FG V + F + VAVK+ H
Sbjct: 14 RLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSE 73
Query: 246 SKSFAVECEVTRNI-RHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEE 304
++ E ++ +I H N+V + AC+ G +V EF G+L ++
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYL-----R 124
Query: 305 DKRHKAPGNLNSLKRLNIAIDVAC----VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAY 360
KR++ + K + C V K + H DL NILL ++
Sbjct: 125 SKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVK 184
Query: 361 VSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ DFG+AR + + R ++APE + DV+SFG+LL E+F+
Sbjct: 185 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 117
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFXEPHARFY 167
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 168 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 218
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 33/216 (15%)
Query: 213 IGAGNFGSVYKGILFE---STTAVAVKVF--NVLHH-DASKSFAVECEVTRNIRHRNLVK 266
+G G+FG V +G T +VAVK +VL +A F E ++ HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
++ + +V E GSL + ++H+ L +L R A+ V
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSL-------LDRLRKHQGHFLLGTLSR--YAVQV 124
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD-----EQTRSIG 381
A + YL H DL N+LL + DFG+ R L D ++ R +
Sbjct: 125 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 181
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE S D + FG+ L EMFT
Sbjct: 182 F----AWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFXEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 33/216 (15%)
Query: 213 IGAGNFGSVYKGILFE---STTAVAVKVF--NVLHH-DASKSFAVECEVTRNIRHRNLVK 266
+G G+FG V +G T +VAVK +VL +A F E ++ HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
++ + +V E GSL + ++H+ L +L R A+ V
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSL-------LDRLRKHQGHFLLGTLSR--YAVQV 130
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD-----EQTRSIG 381
A + YL H DL N+LL + DFG+ R L D ++ R +
Sbjct: 131 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 187
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE S D + FG+ L EMFT
Sbjct: 188 F----AWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 102/242 (42%), Gaps = 59/242 (24%)
Query: 207 FSSENL-----IGAGNFGSVYKGILFESTTAVAVK-VFNVLHHDASKSFAVECEVT-RNI 259
F++E+L IG G +GSV K + S +AVK + + + K ++ +V R+
Sbjct: 19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS 78
Query: 260 RHRNLVKVFTACSGVDFQGND--------------FKALVYEFMANGSLEEWMHPITEED 305
+V+ + G F+ D F VY + + EE + IT
Sbjct: 79 DCPYIVQFY----GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKIT--- 131
Query: 306 KRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFG 365
L ++K LN HL I H D+KPSNILLD + DFG
Sbjct: 132 --------LATVKALN------------HLKENLKIIHRDIKPSNILLDRSGNIKLCDFG 171
Query: 366 IARFLEAADEQTRSIGVEGTTGYIAPEY------GMGHEVSSYGDVYSFGILLLEMFTGL 419
I+ L + +TR G Y+APE G++V S DV+S GI L E+ TG
Sbjct: 172 ISGQLVDSIAKTRDAGCR---PYMAPERIDPSASRQGYDVRS--DVWSLGITLYELATGR 226
Query: 420 RP 421
P
Sbjct: 227 FP 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 89
Query: 267 V--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+ F SG + K VY + + E ++ + R K +L + + +
Sbjct: 90 LRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVKL 138
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI--- 195
Query: 384 GTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 196 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLV 265
F + +GAGN G V+K S +A K+ ++ A ++ + E +V +V
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ A F + ++ E M GSL++ + K G + ++I
Sbjct: 95 GFYGA-----FYSDGEISICMEHMDGGSLDQVL----------KKAGRIPEQILGKVSIA 139
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
V L YL + I H D+KPSNIL++ + DFG++ L D S GT
Sbjct: 140 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF--VGT 193
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE G S D++S G+ L+EM G P
Sbjct: 194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFXEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 91
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G
Sbjct: 92 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFXEPHARFY 141
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 142 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 192
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 193 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
K + +G G F Y+ ++ A KV +L + + E + +++ +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++V F+ +DF +V E SL E +H KR KA + +
Sbjct: 102 PHVVGFHGF-----FEDDDFVYVVLEICRRRSLLE-LH------KRRKAVTEPEARYFMR 149
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
I ++YLH + + H DLK N+ L+D+M + DFG+A +E E+ +++
Sbjct: 150 QTIQG---VQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC 203
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT YIAPE S D++S G +L + G P
Sbjct: 204 --GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 78
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 79 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 116
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 117 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 173
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR ADE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 174 LDFGLAR--HTADEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 229 LFPGTDHI-DQLKL 241
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 33/216 (15%)
Query: 213 IGAGNFGSVYKGILFE---STTAVAVKVF--NVLHH-DASKSFAVECEVTRNIRHRNLVK 266
+G G+FG V +G T +VAVK +VL +A F E ++ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
++ + +V E GSL + ++H+ L +L R A+ V
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSL-------LDRLRKHQGHFLLGTLSR--YAVQV 120
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD-----EQTRSIG 381
A + YL H DL N+LL + DFG+ R L D ++ R +
Sbjct: 121 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE S D + FG+ L EMFT
Sbjct: 178 F----AWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 206 GFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLV 265
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 84
Query: 266 KV--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ F SG + K VY + + E ++ + R K +L + +
Sbjct: 85 RLRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVK 133
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGV 382
+ + + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 134 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI-- 191
Query: 383 EGTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 192 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 227
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 117
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 167
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ A +
Sbjct: 168 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA-----TWT 218
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLV 265
F + +GAGN G V+K S +A K+ ++ A ++ + E +V +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ A F + ++ E M GSL++ + K G + ++I
Sbjct: 68 GFYGA-----FYSDGEISICMEHMDGGSLDQVL----------KKAGRIPEQILGKVSIA 112
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
V L YL + I H D+KPSNIL++ + DFG++ L D S GT
Sbjct: 113 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF--VGT 166
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE G S D++S G+ L+EM G P
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFXEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 78
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 79 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 116
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 117 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 173
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR ADE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 174 LDFGLAR--HTADEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 229 LFPGTDHI-DQLKL 241
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 78
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 79 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 116
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 117 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 173
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR ADE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 174 LDFGLAR--HTADEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 229 LFPGTDHI-DQLKL 241
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V+
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 81
Query: 267 V--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+ F SG + K VY + + E ++ + R K +L + + +
Sbjct: 82 LRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVKL 130
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 131 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI--- 187
Query: 384 GTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 188 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 223
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 111
Query: 267 V--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+ F SG + K VY + + E ++ + R K +L + + +
Sbjct: 112 LRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVKL 160
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI--- 217
Query: 384 GTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 48/231 (20%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTA---VAVKVFN---VLHHDASKSFAVECEVTRNIR 260
+ + ++G G+FG V IL + AVKV + V +S E ++ + +
Sbjct: 34 YKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N++K++ F+ + LV E G L + + S KR
Sbjct: 91 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFD----------------EIISRKRF 129
Query: 321 NIAIDVACVLK-------YLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFL 370
+ +D A +++ Y+H + I H DLKP N+LL+ + + DFG++
Sbjct: 130 S-EVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 185
Query: 371 EAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
EA+ + I GT YIAPE G DV+S G++L + +G P
Sbjct: 186 EASKKMKDKI---GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPP 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 206 GFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLV 265
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 77
Query: 266 KV--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ F SG + K VY + + E ++ + R K +L + +
Sbjct: 78 RLRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVK 126
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGV 382
+ + + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 127 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI-- 184
Query: 383 EGTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 185 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 206 GFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLV 265
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 76
Query: 266 KV--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ F SG + K VY + + E ++ + R K +L + +
Sbjct: 77 RLRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVK 125
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGV 382
+ + + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI-- 183
Query: 383 EGTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 184 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 206 GFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLV 265
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 76
Query: 266 KV--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ F SG + K VY + + E ++ + R K +L + +
Sbjct: 77 RLRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVK 125
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGV 382
+ + + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI-- 183
Query: 383 EGTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 184 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 206 GFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLV 265
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 95
Query: 266 KV--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ F SG + K VY + + E ++ + R K +L + +
Sbjct: 96 RLRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVK 144
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGV 382
+ + + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 145 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI-- 202
Query: 383 EGTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 203 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 238
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 89
Query: 267 V--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+ F SG + K VY + + E ++ + R K +L + + +
Sbjct: 90 LRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVKL 138
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI--- 195
Query: 384 GTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 196 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 33/216 (15%)
Query: 213 IGAGNFGSVYKGILFE---STTAVAVKVF--NVLHH-DASKSFAVECEVTRNIRHRNLVK 266
+G G+FG V +G T +VAVK +VL +A F E ++ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
++ + +V E GSL + ++H+ L +L R A+ V
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSL-------LDRLRKHQGHFLLGTLSR--YAVQV 120
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD-----EQTRSIG 381
A + YL H DL N+LL + DFG+ R L D ++ R +
Sbjct: 121 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE S D + FG+ L EMFT
Sbjct: 178 F----AWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLV 265
F + +GAGN G V+K S +A K+ ++ A ++ + E +V +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ A F + ++ E M GSL++ + K G + ++I
Sbjct: 68 GFYGA-----FYSDGEISICMEHMDGGSLDQVL----------KKAGRIPEQILGKVSIA 112
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
V L YL + I H D+KPSNIL++ + DFG++ L D S GT
Sbjct: 113 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF--VGT 166
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE G S D++S G+ L+EM G P
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLV 265
F + +GAGN G V+K S +A K+ ++ A ++ + E +V +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ A F + ++ E M GSL++ + K G + ++I
Sbjct: 68 GFYGA-----FYSDGEISICMEHMDGGSLDQVL----------KKAGRIPEQILGKVSIA 112
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
V L YL + I H D+KPSNIL++ + DFG++ L D S GT
Sbjct: 113 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF--VGT 166
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE G S D++S G+ L+EM G P
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLV 265
F + +GAGN G V+K S +A K+ ++ A ++ + E +V +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ A F + ++ E M GSL++ + K + P + L +++IA+
Sbjct: 68 GFYGA-----FYSDGEISICMEHMDGGSLDQVLK------KAGRIPEQI--LGKVSIAV- 113
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
+ +L + I H D+KPSNIL++ + DFG++ L D S GT
Sbjct: 114 ---IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF--VGT 166
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE G S D++S G+ L+EM G P
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLV 265
F + +GAGN G V+K S +A K+ ++ A ++ + E +V +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ A F + ++ E M GSL++ + K + P + L +++IA+
Sbjct: 68 GFYGA-----FYSDGEISICMEHMDGGSLDQVLK------KAGRIPEQI--LGKVSIAV- 113
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
+ +L + I H D+KPSNIL++ + DFG++ L D S GT
Sbjct: 114 ---IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF--VGT 166
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE G S D++S G+ L+EM G P
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 36/237 (15%)
Query: 200 LYNATKGFSS----ENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS--KSFAVEC 253
+ NA+ FS + +G G F V + + + A K+ N A + E
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79
Query: 254 EVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHP---ITEEDKRHKA 310
+ R ++H N+V++ + Q F LV++ + G L E + +E D H
Sbjct: 80 RICRKLQHPNIVRLHDS-----IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 134
Query: 311 PGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEM---TAYVSDFGIA 367
L S+ Y H + I H +LKP N+LL + ++DFG+A
Sbjct: 135 QQILESIA-------------YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 178
Query: 368 RFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDD 424
+E D + G GT GY++PE S D+++ G++L + G P D
Sbjct: 179 --IEVNDSEAWH-GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F IG G+FG V E+ A+K+ D K ++ ++ + + +++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++ G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFAEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLVKVFTAC 271
+G G + +VYKG + VA+K + H + + A+ E + ++++H N+V +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI- 68
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
LV+E++ + L++++ GN+ ++ N+ + + +L+
Sbjct: 69 ----IHTEKSLTLVFEYL-DKDLKQYLDDC----------GNIINMH--NVKLFLFQLLR 111
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT-GYIA 390
L + + H DLKP N+L+++ ++DFG+AR A T++ E T Y
Sbjct: 112 GLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR---AKSIPTKTYDNEVVTLWYRP 168
Query: 391 PEYGMGH-EVSSYGDVYSFGILLLEMFTGLRP 421
P+ +G + S+ D++ G + EM TG RP
Sbjct: 169 PDILLGSTDYSTQIDMWGVGCIFYEMATG-RP 199
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 23/220 (10%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
K + +G G F Y+ ++ A KV +L + + E + +++ +
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 85
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++V F+ +DF +V E SL E +H KR KA + +
Sbjct: 86 PHVVGFHGF-----FEDDDFVYVVLEICRRRSLLE-LH------KRRKAVTEPEARYFMR 133
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
I ++YLH + + H DLK N+ L+D+M + DFG+A +E E+ + +
Sbjct: 134 QTIQG---VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC 187
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT YIAPE S D++S G +L + G P
Sbjct: 188 --GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ +M G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 206 GFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLV 265
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 89
Query: 266 KV--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ F SG + K VY + + E ++ + R K +L + +
Sbjct: 90 RLRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVK 138
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGV 382
+ + + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 139 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI-- 196
Query: 383 EGTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 197 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 232
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 23/220 (10%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
K + +G G F Y+ ++ A KV +L + + E + +++ +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++V F+ +DF +V E SL E +H KR KA + +
Sbjct: 102 PHVVGFHGF-----FEDDDFVYVVLEICRRRSLLE-LH------KRRKAVTEPEARYFMR 149
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
I ++YLH + + H DLK N+ L+D+M + DFG+A +E E+ + +
Sbjct: 150 QTIQG---VQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC 203
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT YIAPE S D++S G +L + G P
Sbjct: 204 --GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V E+ A+K+ D K ++ E+ + + +++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-----DKQKVVKLK-EIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E+ G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+++D + V+DFG+A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 156
Query: 267 V--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+ F SG + K VY + + E ++ + R K +L + + +
Sbjct: 157 LRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVKL 205
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 206 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI--- 262
Query: 384 GTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 263 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 298
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 206 GFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLV 265
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 76
Query: 266 KV--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ F SG + K VY + + E ++ + R K +L + +
Sbjct: 77 RLRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVK 125
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGV 382
+ + + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI-- 183
Query: 383 EGTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 184 -CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 115
Query: 267 V--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+ F SG + K VY + + E ++ + R K +L + + +
Sbjct: 116 LRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVKL 164
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 165 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI--- 221
Query: 384 GTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 222 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 257
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 113
Query: 267 V--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+ F SG + K VY + + E ++ + R K +L + + +
Sbjct: 114 LRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVKL 162
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 163 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI--- 219
Query: 384 GTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 220 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 255
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 111
Query: 267 V--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+ F SG + K VY + + E ++ + R K +L + + +
Sbjct: 112 LRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVKL 160
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI--- 217
Query: 384 GTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLV 265
F + +GAGN G V+K S +A K+ ++ A ++ + E +V +V
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ A F + ++ E M GSL++ + K + P + L +++IA+
Sbjct: 87 GFYGA-----FYSDGEISICMEHMDGGSLDQVL------KKAGRIPEQI--LGKVSIAV- 132
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
+ +L + I H D+KPSNIL++ + DFG++ L D S GT
Sbjct: 133 ---IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF--VGT 185
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y++PE G S D++S G+ L+EM G P
Sbjct: 186 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V+
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 82
Query: 267 V--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+ F SG + K VY + + E ++ + R K +L + + +
Sbjct: 83 LRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVKL 131
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 132 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI--- 188
Query: 384 GTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 189 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 224
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 42/228 (18%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRN 263
+ + ++G G+FG V + AVKV + V +S E ++ + + H N
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++K++ F+ + LV E G L + + S KR +
Sbjct: 112 IMKLYEF-----FEDKGYFYLVGEVYTGGELFD----------------EIISRKRFS-E 149
Query: 324 IDVACVLK-------YLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAA 373
+D A +++ Y+H + I H DLKP N+LL+ + + DFG++ EA+
Sbjct: 150 VDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 206
Query: 374 DEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ I GT YIAPE G DV+S G++L + +G P
Sbjct: 207 KKMKDKI---GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPP 250
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 42/228 (18%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRN 263
+ + ++G G+FG V + AVKV + V +S E ++ + + H N
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++K++ F+ + LV E G L + + S KR +
Sbjct: 111 IMKLYEF-----FEDKGYFYLVGEVYTGGELFD----------------EIISRKRFS-E 148
Query: 324 IDVACVLK-------YLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAA 373
+D A +++ Y+H + I H DLKP N+LL+ + + DFG++ EA+
Sbjct: 149 VDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 205
Query: 374 DEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ I GT YIAPE G DV+S G++L + +G P
Sbjct: 206 KKMKDKI---GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPP 249
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
++ +IG G+FG VY+ L +S VA+K VL K+ E ++ R + H N+V+
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 105
Query: 267 V--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+ F SG + K VY + + E ++ + R K +L + + +
Sbjct: 106 LRYFFYSSG------EKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVIYVKL 154
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 155 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI--- 211
Query: 384 GTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 212 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 247
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+++D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 148 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 198
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V E+ A+K+ D K ++ E+ + + +++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-----DKQKVVKLK-EIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E+ G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+++D + V+DFG+A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 23/220 (10%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
K + +G G F Y+ ++ A KV +L + + E + +++ +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
++V F+ +DF +V E SL E +H KR KA + +
Sbjct: 102 PHVVGFHGF-----FEDDDFVYVVLEICRRRSLLE-LH------KRRKAVTEPEARYFMR 149
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
I ++YLH + + H DLK N+ L+D+M + DFG+A +E E+ + +
Sbjct: 150 QTIQG---VQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC 203
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT YIAPE S D++S G +L + G P
Sbjct: 204 --GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 148 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 198
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 42/228 (18%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRN 263
+ + ++G G+FG V + AVKV + V +S E ++ + + H N
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++K++ F+ + LV E G L + + S KR +
Sbjct: 88 IMKLYEF-----FEDKGYFYLVGEVYTGGELFD----------------EIISRKRFS-E 125
Query: 324 IDVACVLK-------YLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFLEAA 373
+D A +++ Y+H + I H DLKP N+LL+ + + DFG++ EA+
Sbjct: 126 VDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 374 DEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ I GT YIAPE G DV+S G++L + +G P
Sbjct: 183 KKMKDKI---GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPP 226
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 148 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 198
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
++ +IG G+FG VY+ L +S VA+K VL A K+ E ++ R + H N+V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 267 V--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+ F SG + K VY + + ++ + R K +L + + +
Sbjct: 78 LRYFFYSSG------EKKDEVYLNLVLDYVPATVYRVARHYSRAK-----QTLPVIYVKL 126
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + + L I H D+KP N+LLD D + DFG A+ L + I
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI--- 183
Query: 384 GTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G + +S DV+S G +L E+ G
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 148 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 198
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 148 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWT 198
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLVKVFTAC 271
+GAGN G V K S +A K+ ++ A ++ + E +V +V + A
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA- 82
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
F + ++ E M GSL++ + +E KR P + L +++IA+ L
Sbjct: 83 ----FYSDGEISICMEHMDGGSLDQ----VLKEAKR--IPEEI--LGKVSIAVLRG--LA 128
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAP 391
YL Q I H D+KPSNIL++ + DFG++ L D S GT Y+AP
Sbjct: 129 YLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF--VGTRSYMAP 182
Query: 392 EYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
E G S D++S G+ L+E+ G P
Sbjct: 183 ERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 52/239 (21%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV +S +AVK + ++H A +++ E
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIH--AKRTYR-E 100
Query: 253 CEVTRNIRHRN---LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK 309
+ ++++H N L+ VFT + ++ + ND LV M
Sbjct: 101 LRLLKHMKHENVIGLLDVFTPATSLE-EFNDV-YLVTHLMG------------------- 139
Query: 310 APGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAY 360
+LN++ + D + LKY+H I H DLKPSN+ ++++
Sbjct: 140 --ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELK 194
Query: 361 VSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
+ DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 195 ILDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 148 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 198
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 140 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 190
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 168 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 218
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 148 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWX 198
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 140 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 190
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG G+ G V S VAVK+ ++ + E + R+ +H N+V+++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY- 111
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
G + L+ EF+ G+L + + + LN + + V L Y
Sbjct: 112 ---LVGEELWVLM-EFLQGGALTDIVSQV-----------RLNEEQIATVCEAVLQALAY 156
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPE 392
LH + H D+K +ILL + +SDFG + + D R V GT ++APE
Sbjct: 157 LHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQI-SKDVPKRKXLV-GTPYWMAPE 211
Query: 393 YGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
++ D++S GI+++EM G P
Sbjct: 212 VISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 50/238 (21%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + IG+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 76
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 77 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 114
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 115 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKI 171
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 172 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 35/255 (13%)
Query: 194 YVSYRML-YNATKGFSSENL-----IGAGNFGSVYKGILFE-STTAVAVKV-FNVLHH-- 243
YV +R Y+ F ENL +G+G FG V + S T V+++V +L
Sbjct: 28 YVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA 87
Query: 244 DASKSFAVECEV---TRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHP 300
D+S+ A+ E+ T+ H N+V + AC+ G + L++E+ G L ++
Sbjct: 88 DSSEREALMSELKMMTQLGSHENIVNLLGACT---LSGPIY--LIFEYCCYGDLLNYLRS 142
Query: 301 ITEE----------DKRHKAPGNLNSL---KRLNIAIDVACVLKYLHLDCQPPIAHCDLK 347
E+ KR + +LN L L A VA +++L H DL
Sbjct: 143 KREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA 199
Query: 348 PSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYS 407
N+L+ + DFG+AR + + ++APE + DV+S
Sbjct: 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWS 259
Query: 408 FGILLLEMFT-GLRP 421
+GILL E+F+ G+ P
Sbjct: 260 YGILLWEIFSLGVNP 274
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 133 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWT 183
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 184 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLVKVFT 269
+++G G +V++G ++ A+KVFN + + E EV + + H+N+VK+F
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
+ K L+ EF GSL + + EE P N L I + V
Sbjct: 75 IEEETTTR---HKVLIMEFCPCGSL----YTVLEE------PSNAYGLPESEFLIVLRDV 121
Query: 330 LKYLHLDCQPPIAHCDLKPSNILL---DDEMTAY-VSDFGIARFLEAADEQTRSIGVEGT 385
+ ++ + I H ++KP NI+ +D + Y ++DFG AR LE DEQ + + GT
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQF--VXLYGT 178
Query: 386 TGYIAPEY------GMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
Y+ P+ H+ YG D++S G+ TG P
Sbjct: 179 EEYLHPDMYERAVLRKDHQ-KKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 106/261 (40%), Gaps = 40/261 (15%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRN 263
F +IG G F V + ++ A+K+ N +L F E +V N R
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
+ ++ A FQ ++ LV E+ G L + +++ +R A L + +A
Sbjct: 123 ITQLHFA-----FQDENYLYLVMEYYVGGDL---LTLLSKFGERIPAEMARFYLAEIVMA 174
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
ID L Y+H D +KP NILLD ++DFG L AD RS+
Sbjct: 175 IDSVHRLGYVHRD---------IKPDNILLDRCGHIRLADFGSCLKLR-ADGTVRSLVAV 224
Query: 384 GTTGYIAPEYGMGHEVSSYG-------DVYSFGILLLEMFTGLRP--SDDM--------- 425
GT Y++PE D ++ G+ EMF G P +D
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH 284
Query: 426 FKDNLNLRNCVKSALPERAEE 446
+K++L+L V +PE A +
Sbjct: 285 YKEHLSL-PLVDEGVPEEARD 304
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 28/226 (12%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
+ F +IG G FG V L + A+K+ N +L + F E +V N
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
+ + + A FQ ++ LV ++ G L + +++ + R L +
Sbjct: 134 KWITTLHYA-----FQDDNNLYLVMDYYVGGDL---LTLLSKFEDRLPEEMARFYLAEMV 185
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFG-IARFLEAADEQTRSI 380
IAID L Y+H D +KP NIL+D ++DFG + +E Q+ S+
Sbjct: 186 IAIDSVHQLHYVHRD---------IKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS-SV 235
Query: 381 GVEGTTGYIAPEYGMGHE--VSSYG---DVYSFGILLLEMFTGLRP 421
V GT YI+PE E YG D +S G+ + EM G P
Sbjct: 236 AV-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 31/225 (13%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLVKVFT 269
+++G G +V++G ++ A+KVFN + + E EV + + H+N+VK+F
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
K L+ EF GSL + + EE P N L I + V
Sbjct: 75 IEEETT---TRHKVLIMEFCPCGSL----YTVLEE------PSNAYGLPESEFLIVLRDV 121
Query: 330 LKYLHLDCQPPIAHCDLKPSNILL---DDEMTAY-VSDFGIARFLEAADEQTRSIGVEGT 385
+ ++ + I H ++KP NI+ +D + Y ++DFG AR LE DEQ + + GT
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQF--VSLYGT 178
Query: 386 TGYIAPEY------GMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
Y+ P+ H+ YG D++S G+ TG P
Sbjct: 179 EEYLHPDMYERAVLRKDHQ-KKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 82
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ L+ F SLEE+ ++ +T H
Sbjct: 83 LRLLKHMKHENVI-----------------GLLDVFTPARSLEEFNDVYLVT-----HLM 120
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 121 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKI 177
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 178 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 233 LFPGTDHI-DQLKL 245
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+++D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 108/249 (43%), Gaps = 43/249 (17%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTR 257
+ ++ + + + + +G+G +GSV F++ T + V V + SK F R
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKL-----SKPFQSIIHAKR 79
Query: 258 NIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKAPGNLN 315
R L+K + + L+ F SLEE+ ++ +T H +LN
Sbjct: 80 TYRELRLLK--------HMKHENVIGLLDVFTPARSLEEFNDVYLVT-----HLMGADLN 126
Query: 316 SLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGI 366
++ + D + LKY+H I H DLKPSN+ ++++ + DFG+
Sbjct: 127 NIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 183
Query: 367 ARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG--LRPSD 423
AR + DE T G T Y APE + + D++S G ++ E+ TG L P
Sbjct: 184 ARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
Query: 424 DMFKDNLNL 432
D D L L
Sbjct: 239 DHI-DQLKL 246
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 37/226 (16%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
FS +IG G FG VY ++ A+K + K ++ T + R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD------KKRIKMKQGETLALNERIMLS 244
Query: 267 V-------FTACSGVDFQGNDFKALVYEFMANGSLEEWM--HPI-TEEDKRHKAPGNLNS 316
+ F C F D + + + M G L + H + +E D R
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-------- 296
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
A ++ L+++H + + DLKP+NILLD+ +SD G+A +
Sbjct: 297 -----YAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSK 344
Query: 377 TRSIGVEGTTGYIAPE-YGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT GY+APE G S D +S G +L ++ G P
Sbjct: 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 76
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 77 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 114
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 115 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKI 171
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 172 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 227 LFPGTDHI-DQLKL 239
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 37/226 (16%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
FS +IG G FG VY ++ A+K + K ++ T + R ++
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD------KKRIKMKQGETLALNERIMLS 243
Query: 267 V-------FTACSGVDFQGNDFKALVYEFMANGSLEEWM--HPI-TEEDKRHKAPGNLNS 316
+ F C F D + + + M G L + H + +E D R
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-------- 295
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
A ++ L+++H + + DLKP+NILLD+ +SD G+A +
Sbjct: 296 -----YAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSK 343
Query: 377 TRSIGVEGTTGYIAPE-YGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT GY+APE G S D +S G +L ++ G P
Sbjct: 344 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+++D + V+DFG A+ ++ R+
Sbjct: 148 AAQIVLTFEYLHSLD----LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWX 198
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 37/232 (15%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHH----DASKSFAVECEVTRNIRHRNLVK 266
+L+G G++G V + + E+ AVK+ + + E ++ R +RH+N+++
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 267 VFTACSGVDFQGNDFKALVYEFMANG--SLEEWMHPITEEDKRH---KAPGNLNSLKRLN 321
+ VD N+ K +Y M ++E + + E KR +A G L
Sbjct: 71 L------VDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE--KRFPVCQAHGYFCQL---- 118
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE--AADEQTRS 379
ID L+YLH I H D+KP N+LL T +S G+A L AAD+ R+
Sbjct: 119 --IDG---LEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170
Query: 380 IGVEGTTGYIAPEYGMGHEVSS--YGDVYSFGILLLEMFTGLRP--SDDMFK 427
+G+ + PE G + S D++S G+ L + TGL P D+++K
Sbjct: 171 --SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK 220
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+++D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+++D + V+DFG A+ ++ R+
Sbjct: 148 AAQIVLTFEYLHSLD----LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWX 198
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+++D + V+DFG A+ ++ R+
Sbjct: 148 AAQIVLTFEYLHSLD----LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWX 198
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+++D + V+DFG A+ ++ R+
Sbjct: 148 AAQIVLTFEYLHSLD----LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWX 198
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 37/226 (16%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
FS +IG G FG VY ++ A+K + K ++ T + R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD------KKRIKMKQGETLALNERIMLS 244
Query: 267 V-------FTACSGVDFQGNDFKALVYEFMANGSLEEWM--HPI-TEEDKRHKAPGNLNS 316
+ F C F D + + + M G L + H + +E D R
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-------- 296
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
A ++ L+++H + + DLKP+NILLD+ +SD G+A +
Sbjct: 297 -----YAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSK 344
Query: 377 TRSIGVEGTTGYIAPE-YGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT GY+APE G S D +S G +L ++ G P
Sbjct: 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 37/226 (16%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
FS +IG G FG VY ++ A+K + K ++ T + R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD------KKRIKMKQGETLALNERIMLS 244
Query: 267 V-------FTACSGVDFQGNDFKALVYEFMANGSLEEWM--HPI-TEEDKRHKAPGNLNS 316
+ F C F D + + + M G L + H + +E D R
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-------- 296
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
A ++ L+++H + + DLKP+NILLD+ +SD G+A +
Sbjct: 297 -----YAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSK 344
Query: 377 TRSIGVEGTTGYIAPE-YGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT GY+APE G S D +S G +L ++ G P
Sbjct: 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 27/222 (12%)
Query: 204 TKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN 263
T G+ + IG G++ + I + AVK+ + D ++ + + R +H N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI---LLRYGQHPN 77
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ + + + +V E M G L ++ R K + + +
Sbjct: 78 IITLKDV-----YDDGKYVYVVTELMKGGEL-------LDKILRQKF---FSEREASAVL 122
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEM----TAYVSDFGIARFLEAADEQTRS 379
+ ++YLH + H DLKPSNIL DE + + DFG A+ L A E
Sbjct: 123 FTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA--ENGLL 177
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ T ++APE + D++S G+LL M TG P
Sbjct: 178 MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 50/238 (21%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+++D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGM-GHEVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT Y+AP + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 50/238 (21%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 82
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 83 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 120
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 121 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 177
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 178 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 233 LFPGTDHI-DQLKL 245
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ L+ F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVI-----------------GLLDVFTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 50/238 (21%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 83
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 84 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 121
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 122 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 178
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 179 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 234 LFPGTDHI-DQLKL 246
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+G G+FG V Y + VAVK +S + E E+ R + H ++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C QG LV E++ GSL +++ P + L +L +
Sbjct: 77 KGCCED---QGEKSVQLVMEYVPLGSLRDYL------------PRHCVGLAQLLLFAQQI 121
Query: 328 CV-LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT 386
C + YLH H L N+LLD++ + DFG+A+ + E R + +G +
Sbjct: 122 CEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR-VREDGDS 177
Query: 387 G--YIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE + DV+SFG+ L E+ T
Sbjct: 178 PVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 83
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 84 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 121
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 122 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 178
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 179 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 234 LFPGTDHI-DQLKL 246
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 29/224 (12%)
Query: 201 YNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA--SKSFAVECEVTRN 258
+ K + S +G+G +GSV I S VA+K + +K E + ++
Sbjct: 38 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH 97
Query: 259 IRHRN---LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLN 315
++H N L+ VFT S + +F Y+F + P + D + +
Sbjct: 98 MQHENVIGLLDVFTPASSL----RNF----YDFYL-------VMPFMQTDLQKIMGMEFS 142
Query: 316 SLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADE 375
K + + LKY+H + H DLKP N+ ++++ + DFG+AR +A E
Sbjct: 143 EEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA--E 197
Query: 376 QTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
T G T Y APE + + D++S G ++ EM TG
Sbjct: 198 MT---GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 238
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 213 IGAGNFGSV----YKGILFESTTAVAVKVFNVLHHDASKS-FAVECEVTRNIRHRNLVKV 267
+G G+FG V Y + VAVK +S + E E+ R + H ++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
C QG LV E++ GSL +++ P + L +L +
Sbjct: 76 KGCCED---QGEKSVQLVMEYVPLGSLRDYL------------PRHCVGLAQLLLFAQQI 120
Query: 328 CV-LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT 386
C + YLH H L N+LLD++ + DFG+A+ + E R + +G +
Sbjct: 121 CEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR-VREDGDS 176
Query: 387 G--YIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+ APE + DV+SFG+ L E+ T
Sbjct: 177 PVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 73
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 74 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 111
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 112 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 168
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 169 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 224 LFPGTDHI-DQLKL 236
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 94
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 95 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 132
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 133 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 189
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 190 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 245 LFPGTDHI-DQLKL 257
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ L+ F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVI-----------------GLLDVFTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFGLARHTD--DEMT---GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 73
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 74 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 111
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 112 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKI 168
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 169 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 224 LFPGTDHI-DQLKL 236
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 73
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 74 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 111
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 112 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 168
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 169 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 224 LFPGTDHI-DQLKL 236
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 91
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 92 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 129
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 130 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 186
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 187 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 242 LFPGTDHI-DQLKL 254
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH--AKRTYR-E 91
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 92 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 129
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 130 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 186
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 187 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 242 LFPGTDHI-DQLKL 254
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 33/234 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNV--LHHDASKSFAVECEVTRNIRHRNLVKVFTA 270
+G G F V + + + A + N L + E + R ++H N+V++ +
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
S +G+ + L+++ + G L E ++ + + + A C+
Sbjct: 79 ISE---EGHHY--LIFDLVTGGELFE----------------DIVAREYYSEADASHCIQ 117
Query: 331 KYLH--LDC-QPPIAHCDLKPSNILLDDEM---TAYVSDFGIARFLEAADEQTRSIGVEG 384
+ L L C Q + H +LKP N+LL ++ ++DFG+A +E EQ G G
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAG 175
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKS 438
T GY++PE D+++ G++L + G P D +D L +K+
Sbjct: 176 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD--EDQHRLYQQIKA 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 50/238 (21%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ L+ F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVI-----------------GLLDVFTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ L+ F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVI-----------------GLLDVFTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 50/238 (21%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 78
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 79 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 116
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 117 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 173
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 174 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFES---TTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
IG G FG V++GI AVA+K N + F E R H ++VK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
GV + + ++ E G L ++ + K +L SL + A ++
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKFSLDLASL--ILYAYQLST 122
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L YL H D+ N+L+ + DFG++R++E + S G + +
Sbjct: 123 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG-KLPIKW 178
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
+APE +S DV+ FG+ + E+ G++P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 90
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 91 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 128
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 129 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 185
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 186 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 241 LFPGTDHI-DQLKL 253
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 77
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 78 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 115
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 116 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 172
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 173 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 228 LFPGTDHI-DQLKL 240
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 76
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 77 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 114
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 115 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 171
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 172 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 227 LFPGTDHI-DQLKL 239
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 73
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 74 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 111
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 112 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 168
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 169 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 224 LFPGTDHI-DQLKL 236
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 70
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 71 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 108
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 109 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 165
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 166 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 220
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 221 LFPGTDHI-DQLKL 233
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH--AKRTYR-E 90
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 91 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 128
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 129 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 185
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 186 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 241 LFPGTDHI-DQLKL 253
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 69
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ L+ F SLEE+ ++ +T H
Sbjct: 70 LRLLKHMKHENVI-----------------GLLDVFTPARSLEEFNDVYLVT-----HLM 107
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 108 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 164
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 165 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 219
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 220 LFPGTDHI-DQLKL 232
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 68
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 69 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 106
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 107 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 163
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 164 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 219 LFPGTDHI-DQLKL 231
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 67
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ L+ F SLEE+ ++ +T H
Sbjct: 68 LRLLKHMKHENVI-----------------GLLDVFTPARSLEEFNDVYLVT-----HLM 105
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 106 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 162
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 163 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 218 LFPGTDHI-DQLKL 230
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 76
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 77 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 114
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 115 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 171
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 172 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 227 LFPGTDHI-DQLKL 239
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 32/220 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS--KSFAVECEVTRNIRHRNLVKVFTA 270
+G G F V + + + A K+ N A + E + R ++H N+V++ +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHP---ITEEDKRHKAPGNLNSLKRLNIAIDVA 327
Q F LV++ + G L E + +E D H L S+
Sbjct: 74 -----IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA--------- 119
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEM---TAYVSDFGIARFLEAADEQTRSIGVEG 384
Y H + I H +LKP N+LL + ++DFG+A +E D + G G
Sbjct: 120 ----YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH-GFAG 169
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDD 424
T GY++PE S D+++ G++L + G P D
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 68
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 69 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 106
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 107 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 163
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 164 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 219 LFPGTDHI-DQLKL 231
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS--KSFAVECEVTRNIRHRNLVKVFTA 270
IG GNF V + VAVK+ + ++S + E + + + H N+VK+F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
+ LV E+ + G + +++ A G + + +
Sbjct: 82 I-----ETEKTLYLVXEYASGGEVFDYL----------VAHGRXKEKEARAKFRQIVSAV 126
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIA 390
+Y H Q I H DLK N+LLD + ++DFG + ++ G Y A
Sbjct: 127 QYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLD---AFCGAPPYAA 180
Query: 391 PEYGMGHEVSS-YGDVYSFGILLLEMFTGLRPSD 423
PE G + DV+S G++L + +G P D
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 94/233 (40%), Gaps = 49/233 (21%)
Query: 207 FSSENLIGAGNFGSVYK---------GILFESTTAVAVKVFNVLHHDASKSFAVECEVTR 257
F ++G G +G V++ G +F V K V + + E +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIF--AMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 258 NIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
++H +V + A FQ L+ E+++ G L L
Sbjct: 77 EVKHPFIVDLIYA-----FQTGGKLYLILEYLSGGEL-------------------FMQL 112
Query: 318 KRLNIAI-DVAC--------VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR 368
+R I + D AC L +LH Q I + DLKP NI+L+ + ++DFG+ +
Sbjct: 113 EREGIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
Query: 369 FLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
E+ + T + GT Y+APE M + D +S G L+ +M TG P
Sbjct: 170 --ESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH--AKRTYR-E 67
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ L+ F SLEE+ ++ +T H
Sbjct: 68 LRLLKHMKHENVI-----------------GLLDVFTPARSLEEFNDVYLVT-----HLM 105
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 106 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 162
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 163 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 218 LFPGTDHI-DQLKL 230
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
L+I I +A +++LH + H DLKPSNI + V DFG+ ++ +E+
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 380 I----------GVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDN 429
+ G GT Y++PE G+ S D++S G++L E+ + +
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRII 283
Query: 430 LNLRN 434
++RN
Sbjct: 284 TDVRN 288
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 32/220 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS--KSFAVECEVTRNIRHRNLVKVFTA 270
+G G F V + + + A K+ N A + E + R ++H N+V++ +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHP---ITEEDKRHKAPGNLNSLKRLNIAIDVA 327
Q F LV++ + G L E + +E D H L S+
Sbjct: 74 -----IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA--------- 119
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEM---TAYVSDFGIARFLEAADEQTRSIGVEG 384
Y H + I H +LKP N+LL + ++DFG+A +E D + G G
Sbjct: 120 ----YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH-GFAG 169
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDD 424
T GY++PE S D+++ G++L + G P D
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 32/220 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDAS--KSFAVECEVTRNIRHRNLVKVFTA 270
+G G F V + + + A K+ N A + E + R ++H N+V++ +
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHP---ITEEDKRHKAPGNLNSLKRLNIAIDVA 327
Q F LV++ + G L E + +E D H L S+
Sbjct: 73 -----IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA--------- 118
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEM---TAYVSDFGIARFLEAADEQTRSIGVEG 384
Y H + I H +LKP N+LL + ++DFG+A +E D + G G
Sbjct: 119 ----YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH-GFAG 168
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDD 424
T GY++PE S D+++ G++L + G P D
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 208
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 29/224 (12%)
Query: 201 YNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA--SKSFAVECEVTRN 258
+ K + S +G+G +GSV I S VA+K + +K E + ++
Sbjct: 20 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH 79
Query: 259 IRHRN---LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLN 315
++H N L+ VFT S + +F Y+F + P + D + +
Sbjct: 80 MQHENVIGLLDVFTPASSL----RNF----YDFYL-------VMPFMQTDLQKIMGLKFS 124
Query: 316 SLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADE 375
K + + LKY+H + H DLKP N+ ++++ + DFG+AR +A E
Sbjct: 125 EEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA--E 179
Query: 376 QTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
T G T Y APE + + D++S G ++ EM TG
Sbjct: 180 MT---GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 77
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 78 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 115
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 116 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKI 172
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 173 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 228 LFPGTDHI-DQLKL 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 77
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 78 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 115
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 116 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 172
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 173 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 228 LFPGTDHI-DQLKL 240
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 94/233 (40%), Gaps = 49/233 (21%)
Query: 207 FSSENLIGAGNFGSVYK---------GILFESTTAVAVKVFNVLHHDASKSFAVECEVTR 257
F ++G G +G V++ G +F V K V + + E +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIF--AMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 258 NIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
++H +V + A FQ L+ E+++ G L L
Sbjct: 77 EVKHPFIVDLIYA-----FQTGGKLYLILEYLSGGEL-------------------FMQL 112
Query: 318 KRLNIAI-DVAC--------VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR 368
+R I + D AC L +LH Q I + DLKP NI+L+ + ++DFG+ +
Sbjct: 113 EREGIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
Query: 369 FLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
E+ + T + GT Y+APE M + D +S G L+ +M TG P
Sbjct: 170 --ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV----ECEVTRNIRHRNLVKVF 268
IG G FG V+K ++ VA+K VL + + F + E ++ + ++H N+V +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALK--KVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 269 TACSGVDFQGNDFKA---LVYEFMAN---GSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
C N KA LV++F + G L + T L+ +KR+
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFT-----------LSEIKRV-- 130
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD--EQTRSI 380
+ +L L+ + I H D+K +N+L+ + ++DFG+AR A + R
Sbjct: 131 ---MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 381 GVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFT 417
T Y PE +G YG D++ G ++ EM+T
Sbjct: 188 NRVVTLWYRPPELLLGER--DYGPPIDLWGAGCIMAEMWT 225
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 106/263 (40%), Gaps = 56/263 (21%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKV----FNVLHHDASKSFAVECEVTRNIRHRN---LV 265
+G+G +GSV VAVK F L H A +++ E + ++++H N L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIH-ARRTYR-ELRLLKHLKHENVIGLL 93
Query: 266 KVFTACSGVDFQGNDFKA--LVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VFT + ++ DF LV M +LN++ +
Sbjct: 94 DVFTPATSIE----DFSEVYLVTTLMG---------------------ADLNNIVKCQAL 128
Query: 324 IDVACV---------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD 374
D LKY+H I H DLKPSN+ ++++ + DFG+AR AD
Sbjct: 129 SDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QAD 182
Query: 375 EQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG--LRPSDDMFKDNLN 431
E+ G T Y APE + + D++S G ++ E+ G L P D
Sbjct: 183 EEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKR 240
Query: 432 LRNCVKSALPERAEEIRASSGST 454
+ V + PE +I + T
Sbjct: 241 IMEVVGTPSPEVLAKISSEHART 263
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 112/255 (43%), Gaps = 55/255 (21%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH--AKRTYR-E 77
Query: 253 CEVTRNIRHRN---LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK 309
+ ++++H N L+ VFT ++ + ND LV M
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLE-EFNDV-YLVTHLMG------------------- 116
Query: 310 APGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAY 360
+LN++ + D + LKY+H I H DLKPSN+ ++++
Sbjct: 117 --ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELK 171
Query: 361 VSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG- 418
+ DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 172 ILDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 419 -LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 227 TLFPGTDHI-DQLKL 240
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 106/263 (40%), Gaps = 56/263 (21%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKV----FNVLHHDASKSFAVECEVTRNIRHRN---LV 265
+G+G +GSV VAVK F L H A +++ E + ++++H N L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIH-ARRTYR-ELRLLKHLKHENVIGLL 85
Query: 266 KVFTACSGVDFQGNDFKA--LVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VFT + ++ DF LV M +LN++ +
Sbjct: 86 DVFTPATSIE----DFSEVYLVTTLMG---------------------ADLNNIVKCQAL 120
Query: 324 IDVACV---------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD 374
D LKY+H I H DLKPSN+ ++++ + DFG+AR AD
Sbjct: 121 SDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QAD 174
Query: 375 EQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG--LRPSDDMFKDNLN 431
E+ G T Y APE + + D++S G ++ E+ G L P D
Sbjct: 175 EEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKR 232
Query: 432 LRNCVKSALPERAEEIRASSGST 454
+ V + PE +I + T
Sbjct: 233 IMEVVGTPSPEVLAKISSEHART 255
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFES---TTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
IG G FG V++GI AVA+K N + F E R H ++VK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
GV + + ++ E G L ++ + K +L SL + A ++
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKYSLDLASL--ILYAYQLST 122
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L YL H D+ N+L+ + DFG++R++E + S G + +
Sbjct: 123 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 178
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
+APE +S DV+ FG+ + E+ G++P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 27/220 (12%)
Query: 210 ENL--IGAGNFGSVYKGILFESTTAVAVKVFNVL-HHDASKSFAVECEVTRNIRHRNLVK 266
ENL +G+G G V+K ++ +AVK + + +K ++ +V + +
Sbjct: 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDV---VLKSHDCP 84
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
C G F N + E M G+ E + KR + P L ++ +AI
Sbjct: 85 YIVQCFGT-FITNTDVFIAMELM--GTCAEKLK------KRMQGPIPERILGKMTVAI-- 133
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT 386
V +L + + H D+KPSNILLD+ + DFGI+ L + RS G
Sbjct: 134 --VKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGC---A 188
Query: 387 GYIAPEY-----GMGHEVSSYGDVYSFGILLLEMFTGLRP 421
Y+APE + DV+S GI L+E+ TG P
Sbjct: 189 AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH--AKRTYR-E 81
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 82 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 119
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 120 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 176
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 177 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 231
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 232 LFPGTDHI-DQLKL 244
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFES---TTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
IG G FG V++GI AVA+K N + F E R H ++VK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
GV + + ++ E G L ++ + K +L SL + A ++
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKYSLDLASL--ILYAYQLST 122
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L YL H D+ N+L+ + DFG++R++E + S G + +
Sbjct: 123 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 178
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
+APE +S DV+ FG+ + E+ G++P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 89/222 (40%), Gaps = 22/222 (9%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKVF 268
++G G+FG V + AVK+ V+ D + VE V +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
+C FQ D V E++ G L M+ I + G + A ++A
Sbjct: 408 HSC----FQTMDRLYFVMEYVNGGDL---MYHIQQV-------GRFKEPHAVFYAAEIAI 453
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L +L I + DLK N++LD E ++DFG+ + E + + GT Y
Sbjct: 454 GLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDY 508
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNL 430
IAPE D ++FG+LL EM G P + +D L
Sbjct: 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 550
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 48/231 (20%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTA---VAVKVFN---VLHHDASKSFAVECEVTRNIR 260
+ + ++G G+FG V IL + AVKV + V +S E ++ + +
Sbjct: 28 YKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+ K++ F+ + LV E G L + + S KR
Sbjct: 85 HPNIXKLYEF-----FEDKGYFYLVGEVYTGGELFD----------------EIISRKRF 123
Query: 321 NIAIDVACVLK-------YLHLDCQPPIAHCDLKPSNILLD---DEMTAYVSDFGIARFL 370
+ +D A +++ Y H + I H DLKP N+LL+ + + DFG++
Sbjct: 124 S-EVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179
Query: 371 EAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
EA+ + I GT YIAPE G DV+S G++L + +G P
Sbjct: 180 EASKKXKDKI---GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPP 226
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFES---TTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
IG G FG V++GI AVA+K N + F E R H ++VK+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
GV + + ++ E G L ++ + K +L SL + A ++
Sbjct: 106 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKYSLDLASL--ILYAYQLST 150
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L YL H D+ N+L+ + DFG++R++E + S G + +
Sbjct: 151 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 206
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
+APE +S DV+ FG+ + E+ G++P
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 240
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFES---TTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
IG G FG V++GI AVA+K N + F E R H ++VK+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
GV + + ++ E G L ++ + K +L SL + A ++
Sbjct: 81 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKYSLDLASL--ILYAYQLST 125
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L YL H D+ N+L+ + DFG++R++E + S G + +
Sbjct: 126 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 181
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
+APE +S DV+ FG+ + E+ G++P
Sbjct: 182 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 215
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 106/263 (40%), Gaps = 56/263 (21%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKV----FNVLHHDASKSFAVECEVTRNIRHRN---LV 265
+G+G +GSV VAVK F L H A +++ E + ++++H N L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIH-ARRTYR-ELRLLKHLKHENVIGLL 93
Query: 266 KVFTACSGVDFQGNDFKA--LVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
VFT + ++ DF LV M +LN++ +
Sbjct: 94 DVFTPATSIE----DFSEVYLVTTLMG---------------------ADLNNIVKSQAL 128
Query: 324 IDVACV---------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD 374
D LKY+H I H DLKPSN+ ++++ + DFG+AR AD
Sbjct: 129 SDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QAD 182
Query: 375 EQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG--LRPSDDMFKDNLN 431
E+ G T Y APE + + D++S G ++ E+ G L P D
Sbjct: 183 EEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKR 240
Query: 432 LRNCVKSALPERAEEIRASSGST 454
+ V + PE +I + T
Sbjct: 241 IMEVVGTPSPEVLAKISSEHART 263
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F +G G+FG V ES A+K+ D K ++ ++ + + +++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-----DKQKVVKLK-QIEHTLNEKRILQ 96
Query: 267 V----FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
F F+ N +V E++A G + + I G +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----------GRFSEPHARFY 146
Query: 323 AIDVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + +YLH LD + + DLKP N+L+D + V+DFG A+ ++ R+
Sbjct: 147 AAQIVLTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ GT +APE + + D ++ G+L+ EM G P
Sbjct: 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 206 GFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFA-VECEVTRNIRHRNL 264
+++ +IG G+FG V++ L ES KV K F E ++ R ++H N+
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ------DKRFKNRELQIMRIVKHPNV 94
Query: 265 V--KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
V K F +G D + F LV E++ RH A ++ L I
Sbjct: 95 VDLKAFFYSNG-DKKDEVFLNLVLEYVPE---------TVYRASRHYAKLK-QTMPMLLI 143
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAY-VSDFGIARFLEAADEQTRSIG 381
+ + +L+ L I H D+KP N+LLD + DFG A+ L A + I
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXI- 202
Query: 382 VEGTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
+ Y APE G ++ D++S G ++ E+ G
Sbjct: 203 --CSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFES---TTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
IG G FG V++GI AVA+K N + F E R H ++VK+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
GV + + ++ E G L ++ + K +L SL + A ++
Sbjct: 75 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKYSLDLASL--ILYAYQLST 119
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L YL H D+ N+L+ + DFG++R++E + S G + +
Sbjct: 120 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 175
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
+APE +S DV+ FG+ + E+ G++P
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFES---TTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
IG G FG V++GI AVA+K N + F E R H ++VK+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
GV + + ++ E G L ++ + K +L SL + A ++
Sbjct: 80 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKYSLDLASL--ILYAYQLST 124
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L YL H D+ N+L+ + DFG++R++E + S G + +
Sbjct: 125 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 180
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
+APE +S DV+ FG+ + E+ G++P
Sbjct: 181 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFES---TTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
IG G FG V++GI AVA+K N + F E R H ++VK+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
GV + + ++ E G L ++ + K +L SL + A ++
Sbjct: 83 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKYSLDLASL--ILYAYQLST 127
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L YL H D+ N+L+ + DFG++R++E + S G + +
Sbjct: 128 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 183
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
+APE +S DV+ FG+ + E+ G++P
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 217
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH--AKRTYR-E 67
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ L+ F SLEE+ ++ +T H
Sbjct: 68 LRLLKHMKHENVI-----------------GLLDVFTPARSLEEFNDVYLVT-----HLM 105
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 106 GADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 162
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 163 LDFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 218 LFPGTDHI-DQLKL 230
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
D+G+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDYGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+++ L YLH + I + DLK N+LLD E ++D+G+ + E + G
Sbjct: 129 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCG 183
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSD 423
T YIAPE G + D ++ G+L+ EM G P D
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+++ L YLH + I + DLK N+LLD E ++D+G+ + + T + G
Sbjct: 161 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC--G 215
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSD 423
T YIAPE G + D ++ G+L+ EM G P D
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 32/234 (13%)
Query: 196 SYRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVK----VFNVLHHDASKSFAV 251
S+ + ++ + IG G +G V + VA+K F+V+ + +K
Sbjct: 46 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN--AKRTLR 103
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKAL--VYEFMANGSLEEWMH---PITEEDK 306
E ++ ++ +H N++ + G +FK++ V + M L + +H P+T E
Sbjct: 104 ELKILKHFKHDNIIAIKDILRPTVPYG-EFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHV 161
Query: 307 RHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGI 366
R+ L L R LKY+H + H DLKPSN+L+++ + DFG+
Sbjct: 162 RY----FLYQLLR---------GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGM 205
Query: 367 ARFL--EAADEQTRSIGVEGTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT 417
AR L A+ Q T Y APE + HE + D++S G + EM
Sbjct: 206 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 1 DLSNNNLSGTLSPQLVGLSSLSIFNVSGNLLSGAISNNFGSCTSLEQLDMHGNLFAGPIX 60
D+S+NN S T P L S+L ++SGN LSG S +CT L+ L++ N F GPI
Sbjct: 203 DVSSNNFS-TGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI- 260
Query: 61 XXXXXXXXXXXXXXXQNNLSDEIPEFLAGF-KFLQNLNLSYNNFESMLP 108
+N + EIP+FL+G L L+LS N+F +P
Sbjct: 261 -PPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 308
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 51/131 (38%), Gaps = 4/131 (3%)
Query: 9 GTLSPQLVGLSSLSIFNVSGNLLSGAISNNFGSCTSLEQLDMHGNLFAGPIXXXXXXXXX 68
G SP S+ ++S N+LSG I GS L L++ N +G I
Sbjct: 619 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 678
Query: 69 XXXXXXXQNNLSDEIPEFLAGFKFLQNLNLSYNNFESMLPIEGIFKNASATSVFGNKKLC 128
N L IP+ ++ L ++LS NN +P G F+ N LC
Sbjct: 679 LNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLC 738
Query: 129 GGIPEFQLPTC 139
G + LP C
Sbjct: 739 G----YPLPRC 745
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%)
Query: 2 LSNNNLSGTLSPQLVGLSSLSIFNVSGNLLSGAISNNFGSCTSLEQLDMHGNLFAGPIXX 61
L NN +G + P L S L ++S N LSG I ++ GS + L L + N+ G I
Sbjct: 398 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Query: 62 XXXXXXXXXXXXXXQNNLSDEIPEFLAGFKFLQNLNLSYNNFESMLP 108
N+L+ EIP L+ L ++LS N +P
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 2 LSNNNLSGTLSPQLVG-LSSLSIFNVSGNLLSGAISNNFGSCTSLEQLDMHGNLFAGPI 59
LSNN L+G + P+ +G L +L+I +S N SG I G C SL LD++ NLF G I
Sbjct: 494 LSNNRLTGEI-PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 551
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 46/109 (42%)
Query: 2 LSNNNLSGTLSPQLVGLSSLSIFNVSGNLLSGAISNNFGSCTSLEQLDMHGNLFAGPIXX 61
LS N LSGT+ L LS L + N+L G I +LE L + N G I
Sbjct: 422 LSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPS 481
Query: 62 XXXXXXXXXXXXXXQNNLSDEIPEFLAGFKFLQNLNLSYNNFESMLPIE 110
N L+ EIP+++ + L L LS N+F +P E
Sbjct: 482 GLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 530
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 4/137 (2%)
Query: 1 DLSNNNLSGTLSPQLVG--LSSLSIFNVSGNLLSGAISNNFGSCTSLEQLDMHGNLFAGP 58
DLS+NN SG + P L ++L + N +G I +C+ L L + N +G
Sbjct: 371 DLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGT 430
Query: 59 IXXXXXXXXXXXXXXXXQNNLSDEIPEFLAGFKFLQNLNLSYNNFESMLPIEGIFKNASA 118
I N L EIP+ L K L+ L L +N+ +P G+ +
Sbjct: 431 IPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP-SGLSNCTNL 489
Query: 119 TSV-FGNKKLCGGIPEF 134
+ N +L G IP++
Sbjct: 490 NWISLSNNRLTGEIPKW 506
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 5 NNLSGTLS-PQLVGLSSLSIFNVSGNLLSGAISNNFGSCT-SLEQLDMHGNLFAGPIXXX 62
NN SG L L+ + L + ++S N SG + + + + SL LD+ N F+GPI
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 63 X-XXXXXXXXXXXXQNN-LSDEIPEFLAGFKFLQNLNLSYNNFESMLP 108
QNN + +IP L+ L +L+LS+N +P
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP 432
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFES---TTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
IG G FG V++GI AVA+K N + F E R H ++VK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
GV + + ++ E G L ++ + K +L SL + A ++
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKFSLDLASL--ILYAYQLST 122
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L YL H D+ N+L+ + DFG++R++E + S G + +
Sbjct: 123 ALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 178
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
+APE +S DV+ FG+ + E+ G++P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
++ L++LH + I + D+K NILLD ++DFG+++ ADE R+ G
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-VADETERAYDFCG 222
Query: 385 TTGYIAPEY----GMGHEVSSYGDVYSFGILLLEMFTGLRP 421
T Y+AP+ GH+ + D +S G+L+ E+ TG P
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAV--DWWSLGVLMYELLTGASP 261
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 22/222 (9%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKVF 268
++G G+FG V + AVK+ V+ D + VE V +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
+C FQ D V E++ G L M+ I ++ R K P + A ++A
Sbjct: 87 HSC----FQTMDRLYFVMEYVNGGDL---MYHI-QQVGRFKEP------HAVFYAAEIAI 132
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L +L I + DLK N++LD E ++DFG+ + E + + GT Y
Sbjct: 133 GLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDY 187
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNL 430
IAPE D ++FG+LL EM G P + +D L
Sbjct: 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 229
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVK-VFNVLHHDA-SKSFAVECEVTRNIRHRN---LVKV 267
+G+G +G+V + + VA+K ++ + +K E + +++RH N L+ V
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
FT +D DF LV FM + H ED+ I V
Sbjct: 93 FTPDETLD-DFTDF-YLVMPFMGTDLGKLMKHEKLGEDR---------------IQFLVY 135
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
+LK L I H DLKP N+ ++++ + DFG+AR AD + V T
Sbjct: 136 QMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVV--TRW 190
Query: 388 YIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
Y APE + + D++S G ++ EM TG
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+++ L YLH + I + DLK N+LLD E ++D+G+ + E + G
Sbjct: 114 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCG 168
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSD 423
T YIAPE G + D ++ G+L+ EM G P D
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 112/246 (45%), Gaps = 37/246 (15%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRN---LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHK 309
+ ++++H N L+ VFT ++ + ND + + A+ ++ I + K
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTHLMGAD------LNNIVKSQK--- 121
Query: 310 APGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
L + + LKY+H I H DLKPSN+ ++++ + DFG+ R
Sbjct: 122 ----LTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRH 174
Query: 370 LEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG--LRPSDDMF 426
+ DE T G T Y APE + + D++S G ++ E+ TG L P D
Sbjct: 175 TD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 229
Query: 427 KDNLNL 432
D L L
Sbjct: 230 -DQLKL 234
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 1 DLSNNNLSGTLSPQLVGLSSLSIFNVSGNLLSGAISNNFGSCTSLEQLDMHGNLFAGPIX 60
D+S+NN S T P L S+L ++SGN LSG S +CT L+ L++ N F GPI
Sbjct: 206 DVSSNNFS-TGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI- 263
Query: 61 XXXXXXXXXXXXXXXQNNLSDEIPEFLAGF-KFLQNLNLSYNNFESMLP 108
+N + EIP+FL+G L L+LS N+F +P
Sbjct: 264 -PPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 51/131 (38%), Gaps = 4/131 (3%)
Query: 9 GTLSPQLVGLSSLSIFNVSGNLLSGAISNNFGSCTSLEQLDMHGNLFAGPIXXXXXXXXX 68
G SP S+ ++S N+LSG I GS L L++ N +G I
Sbjct: 622 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 681
Query: 69 XXXXXXXQNNLSDEIPEFLAGFKFLQNLNLSYNNFESMLPIEGIFKNASATSVFGNKKLC 128
N L IP+ ++ L ++LS NN +P G F+ N LC
Sbjct: 682 LNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLC 741
Query: 129 GGIPEFQLPTC 139
G + LP C
Sbjct: 742 G----YPLPRC 748
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%)
Query: 2 LSNNNLSGTLSPQLVGLSSLSIFNVSGNLLSGAISNNFGSCTSLEQLDMHGNLFAGPIXX 61
L NN +G + P L S L ++S N LSG I ++ GS + L L + N+ G I
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 62 XXXXXXXXXXXXXXQNNLSDEIPEFLAGFKFLQNLNLSYNNFESMLP 108
N+L+ EIP L+ L ++LS N +P
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 2 LSNNNLSGTLSPQLVG-LSSLSIFNVSGNLLSGAISNNFGSCTSLEQLDMHGNLFAGPI 59
LSNN L+G + P+ +G L +L+I +S N SG I G C SL LD++ NLF G I
Sbjct: 497 LSNNRLTGEI-PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 46/109 (42%)
Query: 2 LSNNNLSGTLSPQLVGLSSLSIFNVSGNLLSGAISNNFGSCTSLEQLDMHGNLFAGPIXX 61
LS N LSGT+ L LS L + N+L G I +LE L + N G I
Sbjct: 425 LSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPS 484
Query: 62 XXXXXXXXXXXXXXQNNLSDEIPEFLAGFKFLQNLNLSYNNFESMLPIE 110
N L+ EIP+++ + L L LS N+F +P E
Sbjct: 485 GLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 533
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 4/137 (2%)
Query: 1 DLSNNNLSGTLSPQLVG--LSSLSIFNVSGNLLSGAISNNFGSCTSLEQLDMHGNLFAGP 58
DLS+NN SG + P L ++L + N +G I +C+ L L + N +G
Sbjct: 374 DLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGT 433
Query: 59 IXXXXXXXXXXXXXXXXQNNLSDEIPEFLAGFKFLQNLNLSYNNFESMLPIEGIFKNASA 118
I N L EIP+ L K L+ L L +N+ +P G+ +
Sbjct: 434 IPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP-SGLSNCTNL 492
Query: 119 TSV-FGNKKLCGGIPEF 134
+ N +L G IP++
Sbjct: 493 NWISLSNNRLTGEIPKW 509
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 5 NNLSGTLS-PQLVGLSSLSIFNVSGNLLSGAISNNFGSCT-SLEQLDMHGNLFAGPIXXX 62
NN SG L L+ + L + ++S N SG + + + + SL LD+ N F+GPI
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 63 X-XXXXXXXXXXXXQNN-LSDEIPEFLAGFKFLQNLNLSYNNFESMLP 108
QNN + +IP L+ L +L+LS+N +P
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP 435
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 37/225 (16%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
F L+G G FG V ++ E T A+K+ ++ D E V +N RH
Sbjct: 7 FDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH-----PITEEDKRHKAPGNLNS 316
L + A FQ +D V E+ G L + H TEE R
Sbjct: 65 PFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-------- 109
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
++ L+YLH + + D+K N++LD + ++DFG+ + E +
Sbjct: 110 -----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDG 159
Query: 377 TRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y+APE ++ D + G+++ EM G P
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV----ECEVTRNIRHRNLVKVF 268
IG G FG V+K ++ VA+K VL + + F + E ++ + ++H N+V +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALK--KVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 269 TACSGVDFQGNDFKA---LVYEFMAN---GSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
C N K LV++F + G L + T L+ +KR+
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT-----------LSEIKRV-- 130
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD--EQTRSI 380
+ +L L+ + I H D+K +N+L+ + ++DFG+AR A + R
Sbjct: 131 ---MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 381 GVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFT 417
T Y PE +G YG D++ G ++ EM+T
Sbjct: 188 NRVVTLWYRPPELLLGER--DYGPPIDLWGAGCIMAEMWT 225
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+++ L YLH + I + DLK N+LLD E ++D+G+ + E + G
Sbjct: 118 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCG 172
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSD 423
T YIAPE G + D ++ G+L+ EM G P D
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 37/225 (16%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
F L+G G FG V ++ E T A+K+ ++ D E V +N RH
Sbjct: 10 FDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH-----PITEEDKRHKAPGNLNS 316
L + A FQ +D V E+ G L + H TEE R
Sbjct: 68 PFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-------- 112
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
++ L+YLH + + D+K N++LD + ++DFG+ + E +
Sbjct: 113 -----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDG 162
Query: 377 TRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y+APE ++ D + G+++ EM G P
Sbjct: 163 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFES---TTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
IG G FG V++GI AVA+K N + F E R H ++VK+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
GV + + ++ E G L ++ + K +L SL + A ++
Sbjct: 458 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKFSLDLASL--ILYAYQLST 502
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L YL H D+ N+L+ + DFG++R++E + S G + +
Sbjct: 503 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 558
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
+APE +S DV+ FG+ + E+ G++P
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 37/225 (16%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
F L+G G FG V ++ E T A+K+ ++ D E V +N RH
Sbjct: 7 FDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH-----PITEEDKRHKAPGNLNS 316
L + A FQ +D V E+ G L + H TEE R
Sbjct: 65 PFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-------- 109
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
++ L+YLH + + D+K N++LD + ++DFG+ + E +
Sbjct: 110 -----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDG 159
Query: 377 TRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y+APE ++ D + G+++ EM G P
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 37/225 (16%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
F L+G G FG V ++ E T A+K+ ++ D E V +N RH
Sbjct: 7 FDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH-----PITEEDKRHKAPGNLNS 316
L + A FQ +D V E+ G L + H TEE R
Sbjct: 65 PFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-------- 109
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
++ L+YLH + + D+K N++LD + ++DFG+ + E +
Sbjct: 110 -----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDG 159
Query: 377 TRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y+APE ++ D + G+++ EM G P
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 37/225 (16%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
F L+G G FG V ++ E T A+K+ ++ D E V +N RH
Sbjct: 7 FDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH-----PITEEDKRHKAPGNLNS 316
L + A FQ +D V E+ G L + H TEE R
Sbjct: 65 PFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-------- 109
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
++ L+YLH + + D+K N++LD + ++DFG+ + E +
Sbjct: 110 -----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDG 159
Query: 377 TRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y+APE ++ D + G+++ EM G P
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 32/234 (13%)
Query: 196 SYRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVK----VFNVLHHDASKSFAV 251
S+ + ++ + IG G +G V + VA+K F+V+ + +K
Sbjct: 45 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN--AKRTLR 102
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKAL--VYEFMANGSLEEWMH---PITEEDK 306
E ++ ++ +H N++ + G +FK++ V + M L + +H P+T E
Sbjct: 103 ELKILKHFKHDNIIAIKDILRPTVPYG-EFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHV 160
Query: 307 RHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGI 366
R+ L L R LKY+H + H DLKPSN+L+++ + DFG+
Sbjct: 161 RY----FLYQLLR---------GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGM 204
Query: 367 ARFL--EAADEQTRSIGVEGTTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT 417
AR L A+ Q T Y APE + HE + D++S G + EM
Sbjct: 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 108/284 (38%), Gaps = 41/284 (14%)
Query: 219 GSVYKGILFESTTAVAVKVFNVLHHDASKS--FAVECEVTRNIRHRNLVKVFTACSGVDF 276
G ++KG + VKV V KS F EC R H N++ V AC
Sbjct: 24 GELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS--- 78
Query: 277 QGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLD 336
L+ +M GSL +H T ++ + + A+D+A + +LH
Sbjct: 79 PPAPHPTLITHWMPYGSLYNVLHEGTN--------FVVDQSQAVKFALDMARGMAFLH-T 129
Query: 337 CQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMG 396
+P I L ++++D++MTA +S +F +S G ++APE
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARIS-MADVKF------SFQSPGRMYAPAWVAPEALQK 182
Query: 397 HEVSS---YGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKSALPERAEEIRASSGS 453
+ D++SF +LL E+ T P D+ + ++ ++ P I
Sbjct: 183 KPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSK 242
Query: 454 TQRXXXXXXXXXXXXXGVACSAEQPGERMKINDVEPRLRLIKKK 497
+ C E P +R K + + P L ++ K
Sbjct: 243 LMK---------------ICMNEDPAKRPKFDMIVPILEKMQDK 271
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 37/225 (16%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
F L+G G FG V ++ E T A+K+ ++ D E V +N RH
Sbjct: 12 FDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH-----PITEEDKRHKAPGNLNS 316
L + A FQ +D V E+ G L + H TEE R
Sbjct: 70 PFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-------- 114
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
++ L+YLH + + D+K N++LD + ++DFG+ + E +
Sbjct: 115 -----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDG 164
Query: 377 TRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y+APE ++ D + G+++ EM G P
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV----ECEVTRNIRHRNLVKVF 268
IG G FG V+K ++ VA+K VL + + F + E ++ + ++H N+V +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALK--KVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 269 TACSGVDFQGNDFKA---LVYEFMAN---GSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
C N K LV++F + G L + T L+ +KR+
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT-----------LSEIKRV-- 130
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD--EQTRSI 380
+ +L L+ + I H D+K +N+L+ + ++DFG+AR A + R
Sbjct: 131 ---MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 381 GVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFT 417
T Y PE +G YG D++ G ++ EM+T
Sbjct: 188 NRVVTLWYRPPELLLGER--DYGPPIDLWGAGCIMAEMWT 225
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH--AKRTYR-E 91
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 92 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 129
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 130 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 186
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE G T Y APE + + D++S G ++ E+ TG
Sbjct: 187 LDFGLARHTD--DEMX---GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 242 LFPGTDHI-DQLKL 254
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + R IRH N++ + F+ L+ E ++ G L +++ +TE++
Sbjct: 79 EVNILREIRHPNIITLHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 133
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
L+ + YLH IAH DLKP NI+L D+ + DF
Sbjct: 134 FLKQILDGVH-------------YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDF 177
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GIA +EA +E + GT ++APE + D++S G++ + +G P
Sbjct: 178 GIAHKIEAGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 37/225 (16%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
F L+G G FG V ++ E T A+K+ ++ D E V +N RH
Sbjct: 7 FDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMH-----PITEEDKRHKAPGNLNS 316
L + A FQ +D V E+ G L + H TEE R
Sbjct: 65 PFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-------- 109
Query: 317 LKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ 376
++ L+YLH + + D+K N++LD + ++DFG+ + E +
Sbjct: 110 -----YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDG 159
Query: 377 TRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y+APE ++ D + G+++ EM G P
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 94
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 95 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 132
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 133 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 189
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE G T Y APE + + D++S G ++ E+ TG
Sbjct: 190 LDFGLARHTD--DEMX---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 245 LFPGTDHI-DQLKL 257
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + R IRH N++ + F+ L+ E ++ G L +++ +TE++
Sbjct: 58 EVNILREIRHPNIITLHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 112
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
L+ + YLH IAH DLKP NI+L D+ + DF
Sbjct: 113 FLKQILDGVH-------------YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDF 156
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GIA +EA +E + GT ++APE + D++S G++ + +G P
Sbjct: 157 GIAHKIEAGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ L+ F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVI-----------------GLLDVFTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFGLARHTD--DEMA---GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ L+ F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVI-----------------GLLDVFTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFGLARHTD--DEMA---GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH--AKRTYR-E 67
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ L+ F SLEE+ ++ +T H
Sbjct: 68 LRLLKHMKHENVI-----------------GLLDVFTPARSLEEFNDVYLVT-----HLM 105
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 106 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 162
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DFG+AR + DE G T Y APE + + D++S G ++ E+ TG
Sbjct: 163 LDFGLARHTD--DEMA---GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 218 LFPGTDHI-DQLKL 230
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + R IRH N++ + F+ L+ E ++ G L +++ +TE++
Sbjct: 65 EVNILREIRHPNIITLHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 119
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
L+ + YLH IAH DLKP NI+L D+ + DF
Sbjct: 120 FLKQILDGVH-------------YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDF 163
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GIA +EA +E + GT ++APE + D++S G++ + +G P
Sbjct: 164 GIAHKIEAGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 21/223 (9%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGI-LFESTTAVAVKVFNVLHHDASKSFAV--ECEVT 256
L A + + IG G +G V+K L VA+K V + + E V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 257 RNIR---HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGN 313
R++ H N+V++F C+ LV+E + + L ++ + E PG
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPE-------PGV 117
Query: 314 LNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAA 373
+ ++ + L +LH + H DLKP NIL+ ++DFG+AR
Sbjct: 118 PTETIK-DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF- 172
Query: 374 DEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMF 416
Q V T Y APE + ++ D++S G + EMF
Sbjct: 173 --QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV----ECEVTRNIRHRNLVKVF 268
IG G FG V+K ++ VA+K VL + + F + E ++ + ++H N+V +
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALK--KVLMENEKEGFPITALREIKILQLLKHENVVNLI 82
Query: 269 TACSGVDFQGNDFKA---LVYEFMAN---GSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
C N K LV++F + G L + T L+ +KR+
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT-----------LSEIKRV-- 129
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD--EQTRSI 380
+ +L L+ + I H D+K +N+L+ + ++DFG+AR A + R
Sbjct: 130 ---MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 381 GVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFT 417
T Y PE +G YG D++ G ++ EM+T
Sbjct: 187 NRVVTLWYRPPELLLGER--DYGPPIDLWGAGCIMAEMWT 224
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 26/231 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDASKSFAVECEVTRNIRHRNLVKVFT 269
+G G FG+VY +S VA+KV + E E+ ++ H N+++++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 270 ACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
F L+ E+ G L + + D++ A I ++A
Sbjct: 91 Y-----FYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA----------TIMEELADA 135
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
L Y H + H D+KP N+LL + ++DFG + + +T GT Y+
Sbjct: 136 LMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC----GTLDYL 188
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKSAL 440
PE G + D++ G+L E+ G P + N R VK L
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVG-NPPFESASHNETYRRIVKVDL 238
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 213 IGAGNFGSVYKGILFES---TTAVAVKVF-NVLHHDASKSFAVECEVTRNIRHRNLVKVF 268
IG G FG V++GI AVA+K N + F E R H ++VK+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
GV + + ++ E G L ++ + K +L SL + A ++
Sbjct: 458 ----GVITENPVW--IIMELCTLGELRSFL-------QVRKFSLDLASL--ILYAYQLST 502
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
L YL H D+ N+L+ + DFG++R++E + S G + +
Sbjct: 503 ALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 558
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
+APE +S DV+ FG+ + E+ G++P
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 21/223 (9%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGI-LFESTTAVAVKVFNVLHHDASKSFAV--ECEVT 256
L A + + IG G +G V+K L VA+K V + + E V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 257 RNIR---HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGN 313
R++ H N+V++F C+ LV+E + + L ++ + E PG
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPE-------PGV 117
Query: 314 LNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAA 373
+ ++ + L +LH + H DLKP NIL+ ++DFG+AR
Sbjct: 118 PTETIK-DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF- 172
Query: 374 DEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMF 416
Q V T Y APE + ++ D++S G + EMF
Sbjct: 173 --QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 31/224 (13%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNIR 260
K F + +G G F V +L E + + A K S E V R I+
Sbjct: 22 KIFEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIK 78
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+V A + ++ + LV + ++ G L I E K + ++L R
Sbjct: 79 HENIV----ALEDI-YESPNHLYLVMQLVSGGEL---FDRIVE--KGFYTEKDASTLIR- 127
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADEQT 377
V + YLH + I H DLKP N+L D+E +SDFG+++ D +
Sbjct: 128 ----QVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMS 180
Query: 378 RSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ G T GY+APE S D +S G++ + G P
Sbjct: 181 TACG---TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 91/235 (38%), Gaps = 35/235 (14%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKV---FNVLHHDASKSFAVECE 254
R L + + +IG G FG V S A+K+ F ++ S F E +
Sbjct: 68 RGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 255 VTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNL 314
+ +V++F A FQ + + +V E+M G L M +K K
Sbjct: 128 IMAFANSPWVVQLFCA-----FQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKF---- 178
Query: 315 NSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAAD 374
+V L +H + H D+KP N+LLD ++DFG ++
Sbjct: 179 -------YTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 228
Query: 375 EQTRSIGVEGTTGYIAPEY-----GMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
V GT YI+PE G G+ YG D +S G+ L EM G P
Sbjct: 229 MVHCDTAV-GTPDYISPEVLKSQGGDGY----YGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 21/223 (9%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGI-LFESTTAVAVKVFNVLHHDASKSFAV--ECEVT 256
L A + + IG G +G V+K L VA+K V + + E V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 257 RNIR---HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGN 313
R++ H N+V++F C+ LV+E + + L ++ + E PG
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPE-------PGV 117
Query: 314 LNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAA 373
+ ++ + L +LH + H DLKP NIL+ ++DFG+AR
Sbjct: 118 PTETIK-DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF- 172
Query: 374 DEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMF 416
Q V T Y APE + ++ D++S G + EMF
Sbjct: 173 --QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 33/241 (13%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVK-VFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTAC 271
+G G +G V K S +AVK + ++ K ++ +++ R + FT
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS----MRTVDCPFT-- 112
Query: 272 SGVDFQGNDFKA----LVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
V F G F+ + E M + SL+++ + DK P ++ IA+ +
Sbjct: 113 --VTFYGALFREGDVWICMELM-DTSLDKFYKQVI--DKGQTIPEDILG----KIAVSIV 163
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
L++LH + H D+KPSN+L++ + DFGI+ +L D ++I G
Sbjct: 164 KALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTIDA-GCKP 218
Query: 388 YIAPEY------GMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRNCVKSALP 441
Y+APE G+ V S D++S GI ++E+ P D L+ V+ P
Sbjct: 219 YMAPERINPELNQKGYSVKS--DIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP 276
Query: 442 E 442
+
Sbjct: 277 Q 277
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 38/231 (16%)
Query: 203 ATKG-----FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTR 257
+TKG ++ EN IG G++G V + + A K + F E E+ +
Sbjct: 19 STKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMK 78
Query: 258 NIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
++ H N+++++ F+ N LV E G L E + HK +
Sbjct: 79 SLDHPNIIRLYET-----FEDNTDIYLVMELCTGGELFERV--------VHKRVFRESDA 125
Query: 318 KRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNIL-LDDEMTAYVS--DFGI-ARFLEAA 373
R I DV + Y H + +AH DLKP N L L D + + DFG+ ARF
Sbjct: 126 AR--IMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 180
Query: 374 DEQTRSIGVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
+T+ GT Y++P+ G YG D +S G+++ + G P
Sbjct: 181 MMRTKV----GTPYYVSPQVLEG----LYGPECDEWSAGVMMYVLLCGYPP 223
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 38/231 (16%)
Query: 203 ATKG-----FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTR 257
+TKG ++ EN IG G++G V + + A K + F E E+ +
Sbjct: 2 STKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMK 61
Query: 258 NIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
++ H N+++++ F+ N LV E G L E + HK +
Sbjct: 62 SLDHPNIIRLYET-----FEDNTDIYLVMELCTGGELFERV--------VHKRVFRESDA 108
Query: 318 KRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNIL-LDDEMTAYVS--DFGI-ARFLEAA 373
R I DV + Y H + +AH DLKP N L L D + + DFG+ ARF
Sbjct: 109 AR--IMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163
Query: 374 DEQTRSIGVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
+T+ GT Y++P+ G YG D +S G+++ + G P
Sbjct: 164 MMRTKV----GTPYYVSPQVLEG----LYGPECDEWSAGVMMYVLLCGYPP 206
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
FG+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LGFGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 54/241 (22%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVT--RNIRHRNL 264
F ++G G FG V K + A+K + H K + EV ++ H+ +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK---IRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 265 VKVFTAC----------SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNL 314
V+ + A + V + F + E+ NG+L + +H NL
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQM--EYCENGTLYDLIHS-----------ENL 111
Query: 315 NSLK--RLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE- 371
N + + + L Y+H I H DLKP NI +D+ + DFG+A+ +
Sbjct: 112 NQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
Query: 372 --------------AADEQTRSIGVEGTTGYIAPEY--GMGHEVSSYGDVYSFGILLLEM 415
++D T +I GT Y+A E G GH + D+YS GI+ EM
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAI---GTAMYVATEVLDGTGH-YNEKIDMYSLGIIFFEM 224
Query: 416 F 416
Sbjct: 225 I 225
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 99/243 (40%), Gaps = 35/243 (14%)
Query: 189 SISFPYVSYRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDA 245
+ +V+YR Y K +IG G+FG V K + VA+K+ H A
Sbjct: 89 QVPHDHVAYR--YEVLK------VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 246 SKSFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEED 305
++ + E R N + V F+ + + +E ++ + E
Sbjct: 141 AEEIRI-LEHLRKQDKDNTMNVIHMLENFTFRNHI--CMTFELLSMN--------LYELI 189
Query: 306 KRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTA--YVSD 363
K++K G L R A + L LH + I HCDLKP NILL + + V D
Sbjct: 190 KKNKFQGFSLPLVR-KFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245
Query: 364 FGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTG--LRP 421
FG + + E R + Y APE +G D++S G +L E+ TG L P
Sbjct: 246 FGSSCY-----EHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300
Query: 422 SDD 424
+D
Sbjct: 301 GED 303
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
D G+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDAGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 99/243 (40%), Gaps = 35/243 (14%)
Query: 189 SISFPYVSYRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDA 245
+ +V+YR Y K +IG G+FG V K + VA+K+ H A
Sbjct: 89 QVPHDHVAYR--YEVLK------VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 246 SKSFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEED 305
++ + E R N + V F+ + + +E ++ + E
Sbjct: 141 AEEIRI-LEHLRKQDKDNTMNVIHMLENFTFRNH--ICMTFELLSMN--------LYELI 189
Query: 306 KRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTA--YVSD 363
K++K G L R A + L LH + I HCDLKP NILL + + V D
Sbjct: 190 KKNKFQGFSLPLVR-KFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245
Query: 364 FGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTG--LRP 421
FG + + E R + Y APE +G D++S G +L E+ TG L P
Sbjct: 246 FGSSCY-----EHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300
Query: 422 SDD 424
+D
Sbjct: 301 GED 303
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 35/226 (15%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRNIRHRNLV 265
++ IG G +G V T VA+K + H + E ++ RH N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ + + +A+ ++ +E ++ + LK ++ D
Sbjct: 105 GIRDI-----LRASTLEAMRDVYIVQDLMETDLYKL---------------LKSQQLSND 144
Query: 326 VACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQT 377
C LKY+H + H DLKPSN+L++ + DFG+AR + + T
Sbjct: 145 HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHT 201
Query: 378 RSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ T Y APE + + + D++S G +L EM + RP
Sbjct: 202 GFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 246
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 90/224 (40%), Gaps = 31/224 (13%)
Query: 204 TKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN 263
+ G+ + IG G++ + + + AVKV + D S+ + + R +H N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLRYGQHPN 82
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEED--KRHKAPGNLNSLKRLN 321
++ + + LV E M G L + I + +A L+++ +
Sbjct: 83 IITLKDV-----YDDGKHVYLVTELMRGGEL---LDKILRQKFFSEREASFVLHTIGK-- 132
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEM----TAYVSDFGIARFLEAADEQT 377
++YLH + H DLKPSNIL DE + DFG A+ L A E
Sbjct: 133 -------TVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA--ENG 180
Query: 378 RSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ T ++APE D++S GILL M G P
Sbjct: 181 LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 34/228 (14%)
Query: 209 SENLIGAGNFGSVYKGILFESTTAVAVKVFNVL-HHDASKSFAVECEVTRNIR-HRNLVK 266
E+++G G V I ++ AVK+ H S+ F E E+ + HRN+++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFR-EVEMLYQCQGHRNVLE 75
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
+ F+ D LV+E M GS+ +H +RH N L+ + DV
Sbjct: 76 LIEF-----FEEEDRFYLVFEKMRGGSILSHIH-----KRRH-----FNELEASVVVQDV 120
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLDDE---MTAYVSDFGIARFLEAADEQTRSIGVE 383
A L +LH IAH DLKP NIL + + DFG+ ++ + + E
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 384 -----GTTGYIAPEY--GMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
G+ Y+APE E S Y D++S G++L + +G P
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 90/224 (40%), Gaps = 31/224 (13%)
Query: 204 TKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN 263
+ G+ + IG G++ + + + AVKV + D S+ + + R +H N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLRYGQHPN 82
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEED--KRHKAPGNLNSLKRLN 321
++ + + LV E M G L + I + +A L+++ +
Sbjct: 83 IITLKDV-----YDDGKHVYLVTELMRGGEL---LDKILRQKFFSEREASFVLHTIGK-- 132
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEM----TAYVSDFGIARFLEAADEQT 377
++YLH + H DLKPSNIL DE + DFG A+ L A E
Sbjct: 133 -------TVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA--ENG 180
Query: 378 RSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ T ++APE D++S GILL M G P
Sbjct: 181 LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKVF 268
++G G+FG V K + AVKV N + D S + E E+ + + H N++K+F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLF 87
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
+ + +V E G L E KR + + I V
Sbjct: 88 EI-----LEDSSSFYIVGELYTGGEL------FDEIIKRKR----FSEHDAARIIKQVFS 132
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
+ Y+H + I H DLKP NILL + + + DFG++ + + I GT
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GT 186
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
YIAPE G DV+S G++L + +G P
Sbjct: 187 AYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 50/238 (21%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG 418
D G+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDRGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
DF +AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDFYLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKVF 268
++G G+FG V K + AVKV N + D S + E E+ + + H N++K+F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLF 87
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
+ + +V E G L E KR + + I V
Sbjct: 88 EI-----LEDSSSFYIVGELYTGGEL------FDEIIKRKR----FSEHDAARIIKQVFS 132
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
+ Y+H + I H DLKP NILL + + + DFG++ + + I GT
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GT 186
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
YIAPE G DV+S G++L + +G P
Sbjct: 187 AYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRHRNLVKVF 268
++G G+FG V K + AVKV N + D S + E E+ + + H N++K+F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLF 87
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
+ + +V E G L E KR + + I V
Sbjct: 88 EI-----LEDSSSFYIVGELYTGGEL------FDEIIKRKR----FSEHDAARIIKQVFS 132
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADEQTRSIGVEGT 385
+ Y+H + I H DLKP NILL + + + DFG++ + + I GT
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GT 186
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
YIAPE G DV+S G++L + +G P
Sbjct: 187 AYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 106/275 (38%), Gaps = 53/275 (19%)
Query: 184 GNPTPSISFPYVSYRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHH 243
PT S+ P+ +++ + +LIG G++G V + VA+K +
Sbjct: 36 SKPTASMPRPHSDWQI----PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE 91
Query: 244 DA--SKSFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPI 301
D K E + + H ++VKV D + D +V E +A+ +
Sbjct: 92 DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFK------ 144
Query: 302 TEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
K + P L L + ++ +KY+H I H DLKP+N L++ + + V
Sbjct: 145 ----KLFRTPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKV 197
Query: 362 SDFGIAR-------------------------FLEAADEQTRSIGVEGTTGYIAPEYGMG 396
DFG+AR F + + + G T Y APE +
Sbjct: 198 CDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILL 257
Query: 397 HE-VSSYGDVYSFGILLLEMFTGLRPSDDMFKDNL 430
E + DV+S G + E+ +M K+N+
Sbjct: 258 QENYTEAIDVWSIGCIFAELL-------NMIKENV 285
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR A + T
Sbjct: 139 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRY 192
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTG 418
Y APE +G D++S G ++ EM G
Sbjct: 193 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 98/243 (40%), Gaps = 35/243 (14%)
Query: 189 SISFPYVSYRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVF---NVLHHDA 245
+ +V+YR Y K +IG G FG V K + VA+K+ H A
Sbjct: 89 QVPHDHVAYR--YEVLK------VIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 246 SKSFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEED 305
++ + E R N + V F+ + + +E ++ + E
Sbjct: 141 AEEIRI-LEHLRKQDKDNTMNVIHMLENFTFRNHI--CMTFELLSMN--------LYELI 189
Query: 306 KRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTA--YVSD 363
K++K G L R A + L LH + I HCDLKP NILL + + V D
Sbjct: 190 KKNKFQGFSLPLVR-KFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245
Query: 364 FGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTG--LRP 421
FG + + E R + Y APE +G D++S G +L E+ TG L P
Sbjct: 246 FGSSCY-----EHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300
Query: 422 SDD 424
+D
Sbjct: 301 GED 303
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 53/259 (20%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFN--------VLHHDASKSFAVECEVTRNIRHRNL 264
+G+G G V ++ VA+K+ + D + + E E+ + + H +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+K+ F D+ +V E M G L + K GN KRL A
Sbjct: 84 IKIKNF-----FDAEDY-YIVLELMEGGELFD------------KVVGN----KRLKEAT 121
Query: 325 ------DVACVLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADE 375
+ ++YLH + I H DLKP N+LL +++ ++DFG ++ L E
Sbjct: 122 CKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GE 175
Query: 376 QTRSIGVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFTGLRPSDDMFKDNLNL 432
+ + GT Y+APE + + Y D +S G++L +G P + + ++L
Sbjct: 176 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE-HRTQVSL 234
Query: 433 RNCVKSA----LPERAEEI 447
++ + S +PE E+
Sbjct: 235 KDQITSGKYNFIPEVWAEV 253
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 53/259 (20%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFN--------VLHHDASKSFAVECEVTRNIRHRNL 264
+G+G G V ++ VA+K+ + D + + E E+ + + H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+K+ F D+ +V E M G L + K GN KRL A
Sbjct: 78 IKIKNF-----FDAEDY-YIVLELMEGGELFD------------KVVGN----KRLKEAT 115
Query: 325 ------DVACVLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADE 375
+ ++YLH + I H DLKP N+LL +++ ++DFG ++ L E
Sbjct: 116 CKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GE 169
Query: 376 QTRSIGVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFTGLRPSDDMFKDNLNL 432
+ + GT Y+APE + + Y D +S G++L +G P + + ++L
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE-HRTQVSL 228
Query: 433 RNCVKSA----LPERAEEI 447
++ + S +PE E+
Sbjct: 229 KDQITSGKYNFIPEVWAEV 247
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 92/227 (40%), Gaps = 30/227 (13%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
+ F +IG G FG V + + A+K+ N +L + F E +V N
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNS--LKR 319
+ + + A FQ + LV ++ G L + + K P ++ +
Sbjct: 134 QWITALHYA-----FQDENHLYLVMDYYVGGDLLTLLSKFED-----KLPEDMARFYIGE 183
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
+ +AID L Y+H D +KP N+LLD ++DFG + S
Sbjct: 184 MVLAIDSIHQLHYVHRD---------IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSS 234
Query: 380 IGVEGTTGYIAPEY--GMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
+ V GT YI+PE M + YG D +S G+ + EM G P
Sbjct: 235 VAV-GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 92/227 (40%), Gaps = 30/227 (13%)
Query: 205 KGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
+ F +IG G FG V + + A+K+ N +L + F E +V N
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNS--LKR 319
+ + + A FQ + LV ++ G L + + K P ++ +
Sbjct: 150 QWITALHYA-----FQDENHLYLVMDYYVGGDLLTLLSKFED-----KLPEDMARFYIGE 199
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRS 379
+ +AID L Y+H D +KP N+LLD ++DFG + S
Sbjct: 200 MVLAIDSIHQLHYVHRD---------IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSS 250
Query: 380 IGVEGTTGYIAPEY--GMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
+ V GT YI+PE M + YG D +S G+ + EM G P
Sbjct: 251 VAV-GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 28/221 (12%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
F L+G G FG V ++ E T A+K+ ++ D E V +N RH
Sbjct: 150 FEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
F FQ +D V E+ G L H + + S R
Sbjct: 208 -----PFLTALKYSFQTHDRLCFVMEYANGGEL-----------FFHLSRERVFSEDRAR 251
Query: 322 I-AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
++ L YLH + + + DLK N++LD + ++DFG+ + E +
Sbjct: 252 FYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMK 307
Query: 381 GVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y+APE ++ D + G+++ EM G P
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 53/259 (20%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFN--------VLHHDASKSFAVECEVTRNIRHRNL 264
+G+G G V ++ VA+K+ + D + + E E+ + + H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+K+ F D+ +V E M G L + K GN KRL A
Sbjct: 78 IKIKNF-----FDAEDY-YIVLELMEGGELFD------------KVVGN----KRLKEAT 115
Query: 325 ------DVACVLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADE 375
+ ++YLH + I H DLKP N+LL +++ ++DFG ++ L E
Sbjct: 116 CKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GE 169
Query: 376 QTRSIGVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFTGLRPSDDMFKDNLNL 432
+ + GT Y+APE + + Y D +S G++L +G P + + ++L
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE-HRTQVSL 228
Query: 433 RNCVKSA----LPERAEEI 447
++ + S +PE E+
Sbjct: 229 KDQITSGKYNFIPEVWAEV 247
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 28/221 (12%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
F L+G G FG V ++ E T A+K+ ++ D E V +N RH
Sbjct: 153 FEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
F FQ +D V E+ G L H + + S R
Sbjct: 211 -----PFLTALKYSFQTHDRLCFVMEYANGGEL-----------FFHLSRERVFSEDRAR 254
Query: 322 I-AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
++ L YLH + + + DLK N++LD + ++DFG+ + E +
Sbjct: 255 FYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMK 310
Query: 381 GVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y+APE ++ D + G+++ EM G P
Sbjct: 311 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 53/259 (20%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFN--------VLHHDASKSFAVECEVTRNIRHRNL 264
+G+G G V ++ VA+K+ + D + + E E+ + + H +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+K+ F D+ +V E M G L + K GN KRL A
Sbjct: 77 IKIKNF-----FDAEDY-YIVLELMEGGELFD------------KVVGN----KRLKEAT 114
Query: 325 ------DVACVLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADE 375
+ ++YLH + I H DLKP N+LL +++ ++DFG ++ L E
Sbjct: 115 CKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GE 168
Query: 376 QTRSIGVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFTGLRPSDDMFKDNLNL 432
+ + GT Y+APE + + Y D +S G++L +G P + + ++L
Sbjct: 169 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE-HRTQVSL 227
Query: 433 RNCVKSA----LPERAEEI 447
++ + S +PE E+
Sbjct: 228 KDQITSGKYNFIPEVWAEV 246
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEV---VTRY 190
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTG 418
Y APE +G D++S G ++ EM G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 53/259 (20%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFN--------VLHHDASKSFAVECEVTRNIRHRNL 264
+G+G G V ++ VA+K+ + D + + E E+ + + H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+K+ F D+ +V E M G L + K GN KRL A
Sbjct: 78 IKIKNF-----FDAEDY-YIVLELMEGGELFD------------KVVGN----KRLKEAT 115
Query: 325 ------DVACVLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADE 375
+ ++YLH + I H DLKP N+LL +++ ++DFG ++ L E
Sbjct: 116 CKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GE 169
Query: 376 QTRSIGVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFTGLRPSDDMFKDNLNL 432
+ + GT Y+APE + + Y D +S G++L +G P + + ++L
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE-HRTQVSL 228
Query: 433 RNCVKSA----LPERAEEI 447
++ + S +PE E+
Sbjct: 229 KDQITSGKYNFIPEVWAEV 247
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
IA+ + L++LH + + H D+KPSN+L++ + DFGI+ +L D+ + I
Sbjct: 113 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDI 168
Query: 381 GVEGTTGYIAPEY------GMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRN 434
G Y+APE G+ V S D++S GI ++E+ P D L+
Sbjct: 169 DA-GCKPYMAPERINPELNQKGYSVKS--DIWSLGITMIELAILRFPYDSWGTPFQQLKQ 225
Query: 435 CVKSALPE 442
V+ P+
Sbjct: 226 VVEEPSPQ 233
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 41/219 (18%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHD-ASKSFAV-ECEVTRNIRHRNLVKVFTA 270
IG G++G V+K ++ VA+K F D K A+ E + + ++H NLV +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNL------NSLKRLNIAI 324
F+ LV+E+ + L E + + P +L +L+ +N
Sbjct: 71 -----FRRKRRLHLVFEYCDHTVLHEL------DRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEA-ADEQTRSIGVE 383
C+ H D+KP NIL+ + DFG AR L +D +
Sbjct: 120 KHNCI-------------HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV--- 163
Query: 384 GTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFTGL 419
T Y +PE +G + YG DV++ G + E+ +G+
Sbjct: 164 ATRWYRSPELLVGD--TQYGPPVDVWAIGCVFAELLSGV 200
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 96/236 (40%), Gaps = 37/236 (15%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAV-AVKV---FNVLHHDASKSFAVEC 253
R L + + +IG G FG V + + +ST V A+K+ F ++ S F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 254 EVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGN 313
++ +V++F A FQ + + +V E+M G L M + P
Sbjct: 126 DIMAFANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLM-------SNYDVP-- 171
Query: 314 LNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAA 373
R A +V L +H H D+KP N+LLD ++DFG +
Sbjct: 172 -EKWARFYTA-EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN-K 225
Query: 374 DEQTRSIGVEGTTGYIAPEY-----GMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
+ R GT YI+PE G G+ YG D +S G+ L EM G P
Sbjct: 226 EGMVRCDTAVGTPDYISPEVLKSQGGDGY----YGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 53/254 (20%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN-----VLHHDASKSFAVE 252
+ ++ + + + + +G+G +GSV ++ VAVK + ++H A +++ E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRTYR-E 71
Query: 253 CEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEW--MHPITEEDKRHKA 310
+ ++++H N++ + F SLEE+ ++ +T H
Sbjct: 72 LRLLKHMKHENVIGLLDV-----------------FTPARSLEEFNDVYLVT-----HLM 109
Query: 311 PGNLNSLKRLNIAID---------VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYV 361
+LN++ + D + LKY+H I H DLKPSN+ ++++ +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 362 SDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGH-EVSSYGDVYSFGILLLEMFTG-- 418
D G+AR + DE T G T Y APE + + D++S G ++ E+ TG
Sbjct: 167 LDGGLARHTD--DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 419 LRPSDDMFKDNLNL 432
L P D D L L
Sbjct: 222 LFPGTDHI-DQLKL 234
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 31/214 (14%)
Query: 212 LIGAGNFGSVYKGILFE---STTAVAVKVFNV-LHHDASKSFAVECEVTRNIRHRNLVKV 267
++G G FG VY+G+ VAVK D + F E + +N+ H ++VK+
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI---AI 324
+ + ++ E G L H N NSLK L + ++
Sbjct: 91 ------IGIIEEEPTWIIMELYPYGEL------------GHYLERNKNSLKVLTLVLYSL 132
Query: 325 DVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + YL ++C H D+ NIL+ + DFG++R++E D S+
Sbjct: 133 QICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TR 187
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT 417
+++PE ++ DV+ F + + E+ +
Sbjct: 188 LPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 87/221 (39%), Gaps = 28/221 (12%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
F L+G G FG V ++ E T A+K+ ++ D E V +N RH
Sbjct: 10 FEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
F FQ +D V E+ G L + H E + S R
Sbjct: 68 -----PFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRE---------RVFSEDRAR 111
Query: 322 I-AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
++ L YLH + + + DLK N++LD + ++DFG+ + E +
Sbjct: 112 FYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMK 167
Query: 381 GVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y+APE ++ D + G+++ EM G P
Sbjct: 168 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 31/220 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G G V+ + + VA+K + + K E ++ R + H N+VKVF
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMH----------PITEEDKRHKAPGNLNSLKRLNI 322
Q D + E + ++E+M P+ EE R L
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRG------ 132
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDE-MTAYVSDFGIARFLEAADEQTRSIG 381
LKY+H + H DLKP+N+ ++ E + + DFG+AR ++ +
Sbjct: 133 -------LKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 382 VEG--TTGYIAPEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
EG T Y +P + + + D+++ G + EM TG
Sbjct: 183 -EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIRHRNL 264
F IG G +G VYK + VA+K + + S A+ E + + + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+ + LV+EF+ ++ K+ L + I
Sbjct: 72 VKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLPLIKS 114
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ +L+ L + H DLKP N+L++ E ++DFG+AR A R+ E
Sbjct: 115 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV 171
Query: 385 TT-GYIAPEYGMGHEVSSYG-DVYSFGILLLEMFT--GLRPSD 423
T Y APE +G + S D++S G + EM T L P D
Sbjct: 172 VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 100/238 (42%), Gaps = 41/238 (17%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAV-AVKV---FNVLHHDASKSFAVEC 253
R L + + +IG G FG V + + +ST V A+K+ F ++ S F E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 254 EVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM--HPITEEDKRHKAP 311
++ +V++F A FQ + + +V E+M G L M + + E+ R
Sbjct: 121 DIMAFANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA 175
Query: 312 GNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE 371
+ +A+D + ++H D +KP N+LLD ++DFG +
Sbjct: 176 -------EVVLALDAIHSMGFIHRD---------VKPDNMLLDKSGHLKLADFGTCMKMN 219
Query: 372 AADEQTRSIGVEGTTGYIAPEY-----GMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
+ R GT YI+PE G G+ YG D +S G+ L EM G P
Sbjct: 220 -KEGMVRCDTAVGTPDYISPEVLKSQGGDGY----YGRECDWWSVGVFLYEMLVGDTP 272
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLVKVFTAC 271
IG G +G VYK T K+ + S + E + + ++H N+VK++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV- 68
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
LV+E + + L++ + G L S+ + + + +
Sbjct: 69 ----IHTKKRLVLVFEHL-DQDLKKLLDV---------CEGGLESVTAKSFLLQLLNGIA 114
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR-FLEAADEQTRSIGVEGTTGYIA 390
Y H + H DLKP N+L++ E ++DFG+AR F + T I T Y A
Sbjct: 115 YCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI---VTLWYRA 168
Query: 391 PEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
P+ MG + S+ D++S G + EM G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 87/221 (39%), Gaps = 28/221 (12%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
F L+G G FG V ++ E T A+K+ ++ D E V +N RH
Sbjct: 11 FEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
F FQ +D V E+ G L + H E + S R
Sbjct: 69 -----PFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRE---------RVFSEDRAR 112
Query: 322 I-AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
++ L YLH + + + DLK N++LD + ++DFG+ + E +
Sbjct: 113 FYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMK 168
Query: 381 GVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y+APE ++ D + G+++ EM G P
Sbjct: 169 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTG 418
Y APE +G D++S G ++ EM G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 87/221 (39%), Gaps = 28/221 (12%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTA--VAVKVFN---VLHHDASKSFAVECEVTRNIRH 261
F L+G G FG V ++ E T A+K+ ++ D E V +N RH
Sbjct: 12 FEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
F FQ +D V E+ G L + H E + S R
Sbjct: 70 -----PFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRE---------RVFSEDRAR 113
Query: 322 I-AIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
++ L YLH + + + DLK N++LD + ++DFG+ + E +
Sbjct: 114 FYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMK 169
Query: 381 GVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y+APE ++ D + G+++ EM G P
Sbjct: 170 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTG 418
Y APE +G D++S G ++ EM G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 96/236 (40%), Gaps = 37/236 (15%)
Query: 198 RMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAV-AVKV---FNVLHHDASKSFAVEC 253
R L + + +IG G FG V + + +ST V A+K+ F ++ S F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 254 EVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGN 313
++ +V++F A FQ + + +V E+M G L M + P
Sbjct: 126 DIMAFANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLM-------SNYDVP-- 171
Query: 314 LNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAA 373
R A +V L +H H D+KP N+LLD ++DFG +
Sbjct: 172 -EKWARFYTA-EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN-K 225
Query: 374 DEQTRSIGVEGTTGYIAPEY-----GMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
+ R GT YI+PE G G+ YG D +S G+ L EM G P
Sbjct: 226 EGMVRCDTAVGTPDYISPEVLKSQGGDGY----YGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 33/195 (16%)
Query: 207 FSSENLIGAGNFGS-VYKGILFESTTAVAVKVFNVLHHDASKSFA-VECEVTR-NIRHRN 263
F ++++G G G+ VY+G+ AV + SFA E ++ R + H N
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPN 79
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
+++ F C+ D Q F+ + E A +L+E+ + ++D H L+ + +
Sbjct: 80 VIRYF--CTEKDRQ---FQYIAIELCA-ATLQEY---VEQKDFAHLG------LEPITLL 124
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLD-----DEMTAYVSDFGIARFLEAADEQ-T 377
L +LH I H DLKP NIL+ ++ A +SDFG+ + L +
Sbjct: 125 QQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFS 181
Query: 378 RSIGVEGTTGYIAPE 392
R GV GT G+IAPE
Sbjct: 182 RRSGVPGTEGWIAPE 196
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 32/219 (14%)
Query: 212 LIGAGNFGSVYKGILFE---STTAVAVKVFNV-LHHDASKSFAVECEVTRNIRHRNLVKV 267
++G G FG VY+G+ VAVK D + F E + +N+ H ++VK+
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI---AI 324
+ + ++ E G L H N NSLK L + ++
Sbjct: 79 ------IGIIEEEPTWIIMELYPYGEL------------GHYLERNKNSLKVLTLVLYSL 120
Query: 325 DVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + YL ++C H D+ NIL+ + DFG++R++E D S+
Sbjct: 121 QICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TR 175
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
+++PE ++ DV+ F + + E+ + G +P
Sbjct: 176 LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIRHRNL 264
F IG G +G VYK + VA+K + + S A+ E + + + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+ + LV+EF+ ++ K+ L + I
Sbjct: 65 VKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLPLIKS 107
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ +L+ L + H DLKP N+L++ E ++DFG+AR A R+ E
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV 164
Query: 385 TT-GYIAPEYGMGHEVSSYG-DVYSFGILLLEMFT--GLRPSD 423
T Y APE +G + S D++S G + EM T L P D
Sbjct: 165 VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTG 418
Y APE +G D++S G ++ EM G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 138 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 191
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTG 418
Y APE +G D++S G ++ EM G
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTG 418
Y APE +G D++S G ++ EM G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 95/235 (40%), Gaps = 29/235 (12%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK 266
F E+ +G G VY+ + A+KV K E V + H N++K
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLK--KTVDKKIVRTEIGVLLRLSHPNIIK 112
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
+ F+ +LV E + G L + + +R A +++K++ A+
Sbjct: 113 LKEI-----FETPTEISLVLELVTGGELFDRIVEKGYYSERDAA----DAVKQILEAV-- 161
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLDD---EMTAYVSDFGIARFLEAADEQTRSIGVE 383
YLH + I H DLKP N+L + ++DFG+++ +E Q V
Sbjct: 162 ----AYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE---HQVLMKTVC 211
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLR---NC 435
GT GY APE G D++S GI+ + G P D D R NC
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC 266
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 24/219 (10%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVE-----CEVTRNIRHRNLV 265
+IG G F V + I E+ AVK+ +V +S + E + ++H ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
++ + + +V+EFM L E KR A + +
Sbjct: 90 ELLET-----YSSDGMLYMVFEFMDGADL------CFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADEQTRSIGV 382
+ L+Y H I H D+KP N+LL ++ + DFG+A ++ + + G
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGR 193
Query: 383 EGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT ++APE DV+ G++L + +G P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 32/219 (14%)
Query: 212 LIGAGNFGSVYKGILFE---STTAVAVKVFNV-LHHDASKSFAVECEVTRNIRHRNLVKV 267
++G G FG VY+G+ VAVK D + F E + +N+ H ++VK+
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI---AI 324
+ + ++ E G L H N NSLK L + ++
Sbjct: 75 ------IGIIEEEPTWIIMELYPYGEL------------GHYLERNKNSLKVLTLVLYSL 116
Query: 325 DVACVLKYLH-LDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVE 383
+ + YL ++C H D+ NIL+ + DFG++R++E D S+
Sbjct: 117 QICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TR 171
Query: 384 GTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFT-GLRP 421
+++PE ++ DV+ F + + E+ + G +P
Sbjct: 172 LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTG 418
Y APE +G D++S G ++ EM G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
+K+LH I H DLKPSNI++ + T + DFG+AR + T + T Y
Sbjct: 139 IKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV---VTRYYR 192
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFTG 418
APE +G D++S G+++ EM G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
+K+LH I H DLKPSNI++ + T + DFG+AR + T + T Y
Sbjct: 139 IKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV---VTRYYR 192
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFTG 418
APE +G D++S G+++ EM G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 343 HCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSY 402
H DL NILL ++ + DFG+AR + + R ++APE +
Sbjct: 216 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 275
Query: 403 GDVYSFGILLLEMFT 417
DV+SFG+LL E+F+
Sbjct: 276 SDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 343 HCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSY 402
H DL NILL ++ + DFG+AR + + R ++APE +
Sbjct: 214 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 273
Query: 403 GDVYSFGILLLEMFT 417
DV+SFG+LL E+F+
Sbjct: 274 SDVWSFGVLLWEIFS 288
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 343 HCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSY 402
H DL NILL ++ + DFG+AR + + R ++APE +
Sbjct: 221 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 280
Query: 403 GDVYSFGILLLEMFT 417
DV+SFG+LL E+F+
Sbjct: 281 SDVWSFGVLLWEIFS 295
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 27/222 (12%)
Query: 204 TKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN 263
T G+ + IG G++ + I + AVK+ + D ++ + + R +H N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI---LLRYGQHPN 77
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++ + + + +V E G L ++ R K + + +
Sbjct: 78 IITLKDV-----YDDGKYVYVVTELXKGGEL-------LDKILRQKF---FSEREASAVL 122
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEM----TAYVSDFGIARFLEAADEQTRS 379
+ ++YLH + H DLKPSNIL DE + + DFG A+ L A + +
Sbjct: 123 FTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT 179
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
T ++APE + D++S G+LL TG P
Sbjct: 180 PCY--TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 343 HCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSY 402
H DL NILL ++ + DFG+AR + + R ++APE +
Sbjct: 223 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 282
Query: 403 GDVYSFGILLLEMFT 417
DV+SFG+LL E+F+
Sbjct: 283 SDVWSFGVLLWEIFS 297
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLVKVFTAC 271
IG G +G VYK T K+ + S + E + + ++H N+VK++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV- 68
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
LV+E + + L++ + G L S+ + + + +
Sbjct: 69 ----IHTKKRLVLVFEHL-DQDLKKLLDV---------CEGGLESVTAKSFLLQLLNGIA 114
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR-FLEAADEQTRSIGVEGTTGYIA 390
Y H + H DLKP N+L++ E ++DFG+AR F + T + T Y A
Sbjct: 115 YCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV---VTLWYRA 168
Query: 391 PEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
P+ MG + S+ D++S G + EM G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRNIRHRNLVKVFTAC 271
IG G +G VYK T K+ + S + E + + ++H N+VK++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV- 68
Query: 272 SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLK 331
LV+E + + L++ + G L S+ + + + +
Sbjct: 69 ----IHTKKRLVLVFEHL-DQDLKKLLDV---------CEGGLESVTAKSFLLQLLNGIA 114
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR-FLEAADEQTRSIGVEGTTGYIA 390
Y H + H DLKP N+L++ E ++DFG+AR F + T + T Y A
Sbjct: 115 YCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV---VTLWYRA 168
Query: 391 PEYGMG-HEVSSYGDVYSFGILLLEMFTG 418
P+ MG + S+ D++S G + EM G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 33/213 (15%)
Query: 238 FNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACSGVD----------FQGNDFKALVYE 287
F +H K +C V + V+ AC+G+ + + + E
Sbjct: 85 FGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 144
Query: 288 FMANGSLEEWMHPI--TEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCD 345
+ GSL + + + ED+ +L L A++ L+YLH I H D
Sbjct: 145 LLEGGSLGQLIKQMGCLPEDR---------ALYYLGQALEG---LEYLHTR---RILHGD 189
Query: 346 LKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSI----GVEGTTGYIAPEYGMGHEVS 400
+K N+LL D A + DFG A L+ D +S+ + GT ++APE MG
Sbjct: 190 VKADNVLLSSDGSRAALCDFGHALCLQP-DGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 401 SYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLR 433
+ D++S ++L M G P F+ L L+
Sbjct: 249 AKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 281
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIRHRNL 264
F IG G +G VYK + VA+K + + S A+ E + + + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+ + LV+EF+ ++ K+ L + I
Sbjct: 65 VKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLPLIKS 107
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ +L+ L + H DLKP N+L++ E ++DFG+AR A R+ E
Sbjct: 108 YLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV 164
Query: 385 TT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
T Y APE +G S+ D++S G + EM T L P D
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIRHRNL 264
F IG G +G VYK + VA+K + + S A+ E + + + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+ + LV+EF+ ++ K+ L + I
Sbjct: 72 VKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLPLIKS 114
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ +L+ L + H DLKP N+L++ E ++DFG+AR A R+ E
Sbjct: 115 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV 171
Query: 385 TT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
T Y APE +G S+ D++S G + EM T L P D
Sbjct: 172 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 33/213 (15%)
Query: 238 FNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACSGVD----------FQGNDFKALVYE 287
F +H K +C V + V+ AC+G+ + + + E
Sbjct: 71 FGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130
Query: 288 FMANGSLEEWMHPI--TEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCD 345
+ GSL + + + ED+ +L L A++ L+YLH I H D
Sbjct: 131 LLEGGSLGQLIKQMGCLPEDR---------ALYYLGQALEG---LEYLHTR---RILHGD 175
Query: 346 LKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSI----GVEGTTGYIAPEYGMGHEVS 400
+K N+LL D A + DFG A L+ D +S+ + GT ++APE MG
Sbjct: 176 VKADNVLLSSDGSRAALCDFGHALCLQP-DGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 401 SYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLR 433
+ D++S ++L M G P F+ L L+
Sbjct: 235 AKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 267
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 324 IDVACVLK-------YLHLDCQPPIAHCDLKPSNILLD-DEMTAYVS--DFGIARFLEAA 373
+D A ++K YLH + I H DLKP N+LL+ E A + DFG++ E
Sbjct: 136 VDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192
Query: 374 DEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ + GT YIAPE + + DV+S G++L + G P
Sbjct: 193 KKMKERL---GTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ ++ K+ L +
Sbjct: 64 HPNIVKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLP 106
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 163
Query: 381 GVEGTT-GYIAPEYGMGHEVSSYG-DVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G + S D++S G + EM T L P D
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ ++ K+ L +
Sbjct: 63 HPNIVKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLP 105
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 162
Query: 381 GVEGTT-GYIAPEYGMGHEVSSYG-DVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G + S D++S G + EM T L P D
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ ++ K+ L +
Sbjct: 65 HPNIVKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLP 107
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 108 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 164
Query: 381 GVEGTT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G S+ D++S G + EM T L P D
Sbjct: 165 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ ++ K+ L +
Sbjct: 64 HPNIVKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLP 106
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 163
Query: 381 GVEGTT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G S+ D++S G + EM T L P D
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ ++ K+ L +
Sbjct: 62 HPNIVKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLP 104
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 161
Query: 381 GVEGTT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G S+ D++S G + EM T L P D
Sbjct: 162 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ ++ K+ L +
Sbjct: 61 HPNIVKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLP 103
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 160
Query: 381 GVEGTT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G S+ D++S G + EM T L P D
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 343 HCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSY 402
H DL NILL + + DFG+AR + + R ++APE S+
Sbjct: 222 HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTK 281
Query: 403 GDVYSFGILLLEMFT 417
DV+S+G+LL E+F+
Sbjct: 282 SDVWSYGVLLWEIFS 296
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ ++ K+ L +
Sbjct: 63 HPNIVKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLP 105
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 162
Query: 381 GVEGTT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G S+ D++S G + EM T L P D
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ ++ K+ L +
Sbjct: 62 HPNIVKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLP 104
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 161
Query: 381 GVEGTT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G S+ D++S G + EM T L P D
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIRHRNL 264
F IG G +G VYK + VA+K + + S A+ E + + + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+ + LV+EF+ ++ K+ L + I
Sbjct: 65 VKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLPLIKS 107
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ +L+ L + H DLKP N+L++ E ++DFG+AR A R+ E
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV 164
Query: 385 TT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
T Y APE +G S+ D++S G + EM T L P D
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 213 IGAGNFGSVYKGILFE-------STTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLV 265
+G G F ++KG+ E T V +KV + H + S+SF + + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ C F G++ LV EF+ GSL+ ++ K +N L +L +A
Sbjct: 76 LNYGVC----FCGDE-NILVQEFVKFGSLDTYL---------KKNKNCINILWKLEVAKQ 121
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILL---DDEMTA-----YVSDFGIARFLEAADEQT 377
+A + +L + + H ++ NILL +D T +SD GI+ + D
Sbjct: 122 LAWAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
Query: 378 RSIGVEGTTGYIAPE-YGMGHEVSSYGDVYSFGILLLEMFTG 418
I ++ PE ++ D +SFG L E+ +G
Sbjct: 179 ERI------PWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIRHRNL 264
F IG G +G VYK + VA+K + + S A+ E + + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+ + LV+EF+ ++ K+ L + I
Sbjct: 64 VKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLPLIKS 106
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ +L+ L + H DLKP N+L++ E ++DFG+AR A R+ E
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV 163
Query: 385 TT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
T Y APE +G S+ D++S G + EM T L P D
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ ++ K+ L +
Sbjct: 61 HPNIVKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLP 103
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 160
Query: 381 GVEGTT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G S+ D++S G + EM T L P D
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ ++ K+ L +
Sbjct: 61 HPNIVKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLP 103
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 160
Query: 381 GVEGTT-GYIAPEYGMGHEVSSYG-DVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G + S D++S G + EM T L P D
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIRHRNL 264
F IG G +G VYK + VA+K + + S A+ E + + + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+ + LV+EF+ ++ K+ L + I
Sbjct: 65 VKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLPLIKS 107
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ +L+ L + H DLKP N+L++ E ++DFG+AR A R+ E
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV 164
Query: 385 TT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
T Y APE +G S+ D++S G + EM T L P D
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ ++ K+ L +
Sbjct: 61 HPNIVKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLP 103
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 160
Query: 381 GVEGTT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G S+ D++S G + EM T L P D
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIRHRNL 264
F IG G +G VYK + VA+K + + S A+ E + + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+ + LV+EF+ ++ K+ L + I
Sbjct: 64 VKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLPLIKS 106
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ +L+ L + H DLKP N+L++ E ++DFG+AR A R+ E
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV 163
Query: 385 TT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
T Y APE +G S+ D++S G + EM T L P D
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 88/219 (40%), Gaps = 25/219 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK-SFAVECEVTRNIRHRNLV 265
+ +++G G F V + VA+K + + S E V I+H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
A + ++ L+ + ++ G L I E+ G +
Sbjct: 80 ----ALDDI-YESGGHLYLIMQLVSGGEL---FDRIVEK-------GFYTERDASRLIFQ 124
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNIL---LDDEMTAYVSDFGIARFLEAADEQTRSIGV 382
V +KYLH I H DLKP N+L LD++ +SDFG+++ + + + G
Sbjct: 125 VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG- 180
Query: 383 EGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
T GY+APE S D +S G++ + G P
Sbjct: 181 --TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 33/213 (15%)
Query: 238 FNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACSGVD----------FQGNDFKALVYE 287
F +H K +C V + V+ AC+G+ + + + E
Sbjct: 87 FGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 146
Query: 288 FMANGSLEEWMHPI--TEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCD 345
+ GSL + + + ED+ +L L A++ L+YLH I H D
Sbjct: 147 LLEGGSLGQLIKQMGCLPEDR---------ALYYLGQALEG---LEYLHTR---RILHGD 191
Query: 346 LKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSI----GVEGTTGYIAPEYGMGHEVS 400
+K N+LL D A + DFG A L+ D +S+ + GT ++APE MG
Sbjct: 192 VKADNVLLSSDGSRAALCDFGHALCLQP-DGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 250
Query: 401 SYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLR 433
+ D++S ++L M G P F+ L L+
Sbjct: 251 AKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 283
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ ++ K+ L +
Sbjct: 62 HPNIVKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLP 104
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTY 161
Query: 381 GVEGTT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G S+ D++S G + EM T L P D
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIRHRNL 264
F IG G +G VYK + VA+K + + S A+ E + + + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+ + LV+EF+ ++ K+ L + I
Sbjct: 69 VKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLPLIKS 111
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ +L+ L + H DLKP N+L++ E ++DFG+AR A R+ E
Sbjct: 112 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV 168
Query: 385 TT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
T Y APE +G S+ D++S G + EM T L P D
Sbjct: 169 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 53/259 (20%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFN--------VLHHDASKSFAVECEVTRNIRHRNL 264
+G+G G V ++ VA+++ + D + + E E+ + + H +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+K+ D+ +V E M G L + K GN KRL A
Sbjct: 203 IKIKNFFDAEDYY------IVLELMEGGELFD------------KVVGN----KRLKEAT 240
Query: 325 ------DVACVLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADE 375
+ ++YLH + I H DLKP N+LL +++ ++DFG ++ L E
Sbjct: 241 CKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GE 294
Query: 376 QTRSIGVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFTGLRPSDDMFKDNLNL 432
+ + GT Y+APE + + Y D +S G++L +G P + + ++L
Sbjct: 295 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE-HRTQVSL 353
Query: 433 RNCVKSA----LPERAEEI 447
++ + S +PE E+
Sbjct: 354 KDQITSGKYNFIPEVWAEV 372
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ ++ K+ L +
Sbjct: 63 HPNIVKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLP 105
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTY 162
Query: 381 GVEGTT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G S+ D++S G + EM T L P D
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIRHRNL 264
F IG G +G VYK + VA+K + + S A+ E + + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+ + LV+EF+ ++ K+ L + I
Sbjct: 64 VKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLPLIKS 106
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ +L+ L + H DLKP N+L++ E ++DFG+AR A R+ E
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV 163
Query: 385 TT-GYIAPEYGMGHEVSSYG-DVYSFGILLLEMFT--GLRPSD 423
T Y APE +G + S D++S G + EM T L P D
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 31/222 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNIRHR 262
+ +++G G F V IL E + + +A + S E V I+H
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N+V A + ++ L+ + ++ G L I E+ G +
Sbjct: 77 NIV----ALDDI-YESGGHLYLIMQLVSGGEL---FDRIVEK-------GFYTERDASRL 121
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNIL---LDDEMTAYVSDFGIARFLEAADEQTRS 379
V +KYLH I H DLKP N+L LD++ +SDFG+++ + + +
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G T GY+APE S D +S G++ + G P
Sbjct: 179 CG---TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIRHRNL 264
F IG G +G VYK + VA+K + + S A+ E + + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+ + LV+EF+ ++ K+ L + I
Sbjct: 64 VKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLPLIKS 106
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ +L+ L + H DLKP N+L++ E ++DFG+AR A R+ E
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV 163
Query: 385 TT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
T Y APE +G S+ D++S G + EM T L P D
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIRHRNL 264
F IG G +G VYK + VA+K + + S A+ E + + + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+ + LV+EF+ ++ K+ L + I
Sbjct: 66 VKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLPLIKS 108
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ +L+ L + H DLKP N+L++ E ++DFG+AR A R+ E
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV 165
Query: 385 TT-GYIAPEYGMGHEVSSYG-DVYSFGILLLEMFT--GLRPSD 423
T Y APE +G + S D++S G + EM T L P D
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 53/259 (20%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFN--------VLHHDASKSFAVECEVTRNIRHRNL 264
+G+G G V ++ VA+++ + D + + E E+ + + H +
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
+K+ D+ +V E M G L + K GN KRL A
Sbjct: 217 IKIKNFFDAEDYY------IVLELMEGGELFD------------KVVGN----KRLKEAT 254
Query: 325 ------DVACVLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADE 375
+ ++YLH + I H DLKP N+LL +++ ++DFG ++ L E
Sbjct: 255 CKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GE 308
Query: 376 QTRSIGVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEMFTGLRPSDDMFKDNLNL 432
+ + GT Y+APE + + Y D +S G++L +G P + + ++L
Sbjct: 309 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE-HRTQVSL 367
Query: 433 RNCVKSA----LPERAEEI 447
++ + S +PE E+
Sbjct: 368 KDQITSGKYNFIPEVWAEV 386
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNIL---LDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT 386
+KYLH I H DLKP N+L LD++ +SDFG+++ + + + G T
Sbjct: 129 VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG---TP 182
Query: 387 GYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GY+APE S D +S G++ + G P
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 25/223 (11%)
Query: 202 NATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRH 261
N K F ++G+G F V+ + A+K S E V + I+H
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
N+V + ++ LV + ++ G L I E + +L
Sbjct: 66 ENIVTLEDI-----YESTTHYYLVMQLVSGGEL---FDRILERGVYTEKDASL------- 110
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADEQTR 378
+ V +KYLH + I H DLKP N+L ++ ++DFG+++ + T
Sbjct: 111 VIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA 167
Query: 379 SIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT GY+APE S D +S G++ + G P
Sbjct: 168 C----GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF++ + K+ L +
Sbjct: 64 HPNIVKLLDVI-----HTENKLYLVFEFLSM------------DLKKFMDASALTGIPLP 106
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTY 163
Query: 381 GVEGTT-GYIAPEYGMGHEVSSYG-DVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G + S D++S G + EM T L P D
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF++ L+++M L +
Sbjct: 64 HPNIVKLLDVI-----HTENKLYLVFEFLSM-DLKDFMDA-----------SALTGIPLP 106
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 163
Query: 381 GVEGTT-GYIAPEYGMGHEVSSYG-DVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G + S D++S G + EM T L P D
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 88/222 (39%), Gaps = 31/222 (13%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK----SFAVECEVTRNIRHR 262
+ +++G G F V IL E + + +A + S E V I+H
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 263 NLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
N+V + ++ L+ + ++ G L I E+ G +
Sbjct: 77 NIVALDDI-----YESGGHLYLIMQLVSGGEL---FDRIVEK-------GFYTERDASRL 121
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNIL---LDDEMTAYVSDFGIARFLEAADEQTRS 379
V +KYLH I H DLKP N+L LD++ +SDFG+++ + + +
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G T GY+APE S D +S G++ + G P
Sbjct: 179 CG---TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF++ + K+ L +
Sbjct: 62 HPNIVKLLDVI-----HTENKLYLVFEFLSM------------DLKKFMDASALTGIPLP 104
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTY 161
Query: 381 GVEGTT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G S+ D++S G + EM T L P D
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ + L+++M L +
Sbjct: 61 HPNIVKLLDVI-----HTENKLYLVFEFL-HQDLKDFMDA-----------SALTGIPLP 103
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTY 160
Query: 381 GVEGTT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G S+ D++S G + EM T L P D
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 343 HCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG-VEGTTGYIAPEYGMGHEVSS 401
H D+KP NIL+ + AY+ DFGIA DE+ +G GT Y APE +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS--ATTDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 402 YGDVYSFGILLLEMFTGLRP 421
D+Y+ +L E TG P
Sbjct: 215 RADIYALTCVLYECLTGSPP 234
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 87/219 (39%), Gaps = 39/219 (17%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIR-------HRNLV 265
+G G+F K + +S A AVK+ S +E + I H N+V
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII---------SKRMEANTQKEITALKLCEGHPNIV 69
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
K+ F LV E + G L E + + K+H + + + R
Sbjct: 70 KLHEV-----FHDQLHTFLVMELLNGGELFERI-----KKKKHFSETEASYIMR-----K 114
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDE---MTAYVSDFGIARFLEAADEQTRSIGV 382
+ + ++H + H DLKP N+L DE + + DFG AR L+ D Q
Sbjct: 115 LVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR-LKPPDNQPLKTPC 170
Query: 383 EGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
T Y APE + D++S G++L M +G P
Sbjct: 171 -FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF++ L+++M L +
Sbjct: 63 HPNIVKLLDVI-----HTENKLYLVFEFLSM-DLKDFMDA-----------SALTGIPLP 105
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 162
Query: 381 GVEGTT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G S+ D++S G + EM T L P D
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 213 IGAGNFGSVYKGILFE-------STTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLV 265
+G G F ++KG+ E T V +KV + H + S+SF + + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ C D LV EF+ GSL+ ++ K +N L +L +A
Sbjct: 76 LNYGVCV-----CGDENILVQEFVKFGSLDTYL---------KKNKNCINILWKLEVAKQ 121
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILL---DDEMTA-----YVSDFGIARFLEAADEQT 377
+A + +L + + H ++ NILL +D T +SD GI+ + D
Sbjct: 122 LAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
Query: 378 RSIGVEGTTGYIAPE-YGMGHEVSSYGDVYSFGILLLEMFTG 418
I ++ PE ++ D +SFG L E+ +G
Sbjct: 179 ERI------PWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV-ECEVTRN 258
+++ +++ + IG G +G V + VA+K + H + E ++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLR 81
Query: 259 IRHRNLVKVFTACSGVDFQGNDF-KALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
RH N++ + ND +A E M + + + + E D L
Sbjct: 82 FRHENIIGI-----------NDIIRAPTIEQMKDVYI---VQDLMETDL-------YKLL 120
Query: 318 KRLNIAIDVACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
K +++ D C LKY+H + H DLKPSN+LL+ + DFG+AR
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 177
Query: 370 LEAADEQTRSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ + T + T Y APE + + + D++S G +L EM + RP
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 230
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 39/229 (17%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
+G G FG V ++ AVKV + ++S +E ++ + I++ ++
Sbjct: 43 MGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKY 101
Query: 273 GVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKY 332
F D L++E + E IT N N +I + +LK
Sbjct: 102 HGKFMYYDHMCLIFEPLGPSLYE----IITR--------NNYNGFHIEDIKLYCIEILKA 149
Query: 333 LHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQ---TRSIGVE------ 383
L+ + + H DLKP NILLDD S + R + Q T+S G++
Sbjct: 150 LNYLRKMSLTHTDLKPENILLDDPYFE-KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGC 208
Query: 384 ------------GTTGYIAPE--YGMGHEVSSYGDVYSFGILLLEMFTG 418
T Y APE +G +VSS D++SFG +L E++TG
Sbjct: 209 ATFKSDYHGSIINTRQYRAPEVILNLGWDVSS--DMWSFGCVLAELYTG 255
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 202 NATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFA---VECEVTRN 258
+ K FS IG G+FG+VY ++ VA+K + +++ + E +
Sbjct: 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 110
Query: 259 IRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLK 318
+RH N ++ + C + LV E+ GS + + + HK P L+
Sbjct: 111 LRHPNTIQ-YRGC----YLREHTAWLVMEYCL-GSASDLL-------EVHKKP-----LQ 152
Query: 319 RLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTR 378
+ IA L+ L + H D+K NILL + + DFG A + A+
Sbjct: 153 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV- 211
Query: 379 SIGVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEM 415
GT ++APE + + Y DV+S GI +E+
Sbjct: 212 -----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
IA+ + L++LH + + H D+KPSN+L++ DFGI+ +L D+ + I
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL--VDDVAKDI 195
Query: 381 GVEGTTGYIAPEY------GMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLRN 434
G Y APE G+ V S D++S GI +E+ P D L+
Sbjct: 196 DA-GCKPYXAPERINPELNQKGYSVKS--DIWSLGITXIELAILRFPYDSWGTPFQQLKQ 252
Query: 435 CVKSALPE 442
V+ P+
Sbjct: 253 VVEEPSPQ 260
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 209 SENLIGAGNFGSVYKGILFESTTAVAVKVFNVLH-HDASKSFAVECEVTRNIR-HRNLVK 266
E+++G G V I ++ AVK+ H S+ F E E+ + HRN+++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFR-EVEMLYQCQGHRNVLE 75
Query: 267 VFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDV 326
+ F+ D LV+E M GS+ +H +RH N L+ + DV
Sbjct: 76 LIEF-----FEEEDRFYLVFEKMRGGSILSHIH-----KRRH-----FNELEASVVVQDV 120
Query: 327 ACVLKYLHLDCQPPIAHCDLKPSNILLDDE---MTAYVSDFGIARFLEAADEQTRSIGVE 383
A L +LH IAH DLKP NIL + + DF + ++ + + E
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 384 -----GTTGYIAPEY--GMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
G+ Y+APE E S Y D++S G++L + +G P
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSI----GVEG 384
L+YLH I H D+K N+LL D A + DFG A L+ D +S+ + G
Sbjct: 198 LEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQP-DGLGKSLLTGDYIPG 253
Query: 385 TTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLR 433
T ++APE +G + DV+S ++L M G P F+ L L+
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 302
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 95/241 (39%), Gaps = 54/241 (22%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVT--RNIRHRNL 264
F ++G G FG V K + A+K + H K + EV ++ H+ +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK---IRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 265 VKVFTAC----------SGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNL 314
V+ + A + V + F + E+ N +L + +H NL
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQM--EYCENRTLYDLIHS-----------ENL 111
Query: 315 NSLK--RLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE- 371
N + + + L Y+H I H DLKP NI +D+ + DFG+A+ +
Sbjct: 112 NQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
Query: 372 --------------AADEQTRSIGVEGTTGYIAPEY--GMGHEVSSYGDVYSFGILLLEM 415
++D T +I GT Y+A E G GH + D+YS GI+ EM
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAI---GTAMYVATEVLDGTGH-YNEKIDMYSLGIIFFEM 224
Query: 416 F 416
Sbjct: 225 I 225
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+EF+ ++ K L +
Sbjct: 64 HPNIVKLLDVI-----HTENKLYLVFEFLH------------QDLKTFMDASALTGIPLP 106
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 163
Query: 381 GVEGTT-GYIAPEYGMGHEVSSYG-DVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G + S D++S G + EM T L P D
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 36/223 (16%)
Query: 202 NATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFA---VECEVTRN 258
+ K FS IG G+FG+VY ++ VA+K + +++ + E +
Sbjct: 12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 71
Query: 259 IRHRNLVKVFTACSGVDFQGNDFKALVYEF---MANGSLEEWMHPITEEDKRHKAPGNLN 315
+RH N ++ + C + LV E+ A+ LE P+ E + G L
Sbjct: 72 LRHPNTIQ-YRGC----YLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ 126
Query: 316 SLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADE 375
L YLH + H D+K NILL + + DFG A + A+
Sbjct: 127 GLA-------------YLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX 170
Query: 376 QTRSIGVEGTTGYIAPEYGMGHEVSSYG---DVYSFGILLLEM 415
GT ++APE + + Y DV+S GI +E+
Sbjct: 171 FV------GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRN 258
+++ +++ + IG G +G V + VA+K + H + E ++
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 259 IRHRNLVKVFTACSGVDFQGNDF-KALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
RH N++ + ND +A E M + + + + E D L
Sbjct: 78 FRHENIIGI-----------NDIIRAPTIEQMKDVYI---VQDLMETDL-------YKLL 116
Query: 318 KRLNIAIDVACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
K +++ D C LKY+H + H DLKPSN+LL+ + DFG+AR
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 173
Query: 370 LEAADEQTRSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ + T + T Y APE + + + D++S G +L EM + RP
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 226
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + + I+H N++ + ++ L+ E +A G L +++ +TEE+
Sbjct: 64 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
LN + YLH IAH DLKP NI+L D + DF
Sbjct: 119 FLKQILNGVY-------------YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G+A ++ +E + GT ++APE + D++S G++ + +G P
Sbjct: 163 GLAHKIDFGNEFK---NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 35/219 (15%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLH--HDASKSFAVECEVTRNIRHRNLVKVF 268
LIG G FG VY G VA+++ ++ D K+F E R RH N+V
Sbjct: 39 ELIGKGRFGQVYHG---RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVAC 328
AC A++ +L + + + A L+ K IA ++
Sbjct: 96 GAC-----MSPPHLAIITSLCKGRTL----YSVVRD-----AKIVLDVNKTRQIAQEIVK 141
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFG---IARFLEAADEQTRSIGVEGT 385
+ YLH I H DLK N+ D+ ++DFG I+ L+A + + G
Sbjct: 142 GMGYLHAKG---ILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGW 197
Query: 386 TGYIAPEYGMGHE---------VSSYGDVYSFGILLLEM 415
++APE S + DV++ G + E+
Sbjct: 198 LCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG-VEGTTGY 388
LKY+H + H DLKPSN+LL+ + DFG+AR + + T + T Y
Sbjct: 137 LKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 389 IAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
APE + + + D++S G +L EM + RP
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 226
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG-VEGTTGY 388
LKY+H + H DLKPSN+LL+ + DFG+AR + + T + T Y
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 389 IAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
APE + + + D++S G +L EM + RP
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 230
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 175 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 228
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRN 258
+++ +++ + IG G +G V + VA+K + H + E ++
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 79
Query: 259 IRHRNLVKVFTACSGVDFQGNDF-KALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
RH N++ + ND +A E M + + + + E D L
Sbjct: 80 FRHENIIGI-----------NDIIRAPTIEQMKDVYI---VQDLMETDL-------YKLL 118
Query: 318 KRLNIAIDVACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
K +++ D C LKY+H + H DLKPSN+LL+ + DFG+AR
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 175
Query: 370 LEAADEQTRSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ + T + T Y APE + + + D++S G +L EM + RP
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG-VEGTTGY 388
LKY+H + H DLKPSN+LL+ + DFG+AR + + T + T Y
Sbjct: 137 LKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 389 IAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
APE + + + D++S G +L EM + RP
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 226
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
+K+LH I H DLKPSNI++ + T + DFG+AR + T + T Y
Sbjct: 139 IKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV---VTRYYR 192
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEMFTG 418
APE +G D++S G ++ EM G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRN 258
+++ +++ + IG G +G V + VA+K + H + E ++
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 259 IRHRNLVKVFTACSGVDFQGNDF-KALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
RH N++ + ND +A E M + + + + E D L
Sbjct: 78 FRHENIIGI-----------NDIIRAPTIEQMKDVYI---VQDLMETDL-------YKLL 116
Query: 318 KRLNIAIDVACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
K +++ D C LKY+H + H DLKPSN+LL+ + DFG+AR
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 173
Query: 370 LEAADEQTRSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ + T + T Y APE + + + D++S G +L EM + RP
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 226
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG-VEGTTGY 388
LKY+H + H DLKPSN+LL+ + DFG+AR + + T + T Y
Sbjct: 157 LKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 213
Query: 389 IAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
APE + + + D++S G +L EM + RP
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 246
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 175 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 228
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRN 258
+++ +++ + IG G +G V + VA+K + H + E ++
Sbjct: 38 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 97
Query: 259 IRHRNLVKVFTACSGVDFQGNDF-KALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
RH N++ + ND +A E M + + + + E D L
Sbjct: 98 FRHENIIGI-----------NDIIRAPTIEQMKDVYI---VQDLMETDL-------YKLL 136
Query: 318 KRLNIAIDVACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
K +++ D C LKY+H + H DLKPSN+LL+ + DFG+AR
Sbjct: 137 KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 193
Query: 370 LEAADEQTRSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ + T + T Y APE + + + D++S G +L EM + RP
Sbjct: 194 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 246
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRN 258
+++ +++ + IG G +G V + VA+K + H + E ++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 259 IRHRNLVKVFTACSGVDFQGNDF-KALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
RH N++ + ND +A E M + + + + E D L
Sbjct: 82 FRHENIIGI-----------NDIIRAPTIEQMKDVYI---VQDLMETDL-------YKLL 120
Query: 318 KRLNIAIDVACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
K +++ D C LKY+H + H DLKPSN+LL+ + DFG+AR
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
Query: 370 LEAADEQTRSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ + T + T Y APE + + + D++S G +L EM + RP
Sbjct: 178 ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRN 258
+++ +++ + IG G +G V + VA+K + H + E ++
Sbjct: 23 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 82
Query: 259 IRHRNLVKVFTACSGVDFQGNDF-KALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
RH N++ + ND +A E M + + + + E D L
Sbjct: 83 FRHENIIGI-----------NDIIRAPTIEQMKDVYI---VQDLMETDL-------YKLL 121
Query: 318 KRLNIAIDVACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
K +++ D C LKY+H + H DLKPSN+LL+ + DFG+AR
Sbjct: 122 KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 178
Query: 370 LEAADEQTRSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ + T + T Y APE + + + D++S G +L EM + RP
Sbjct: 179 ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 231
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 136 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 189
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 190 YRAPEVILGMGYKENVDIWSVGCIMGEM 217
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 138 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 191
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRN 258
+++ +++ + IG G +G V + VA+K + H + E ++
Sbjct: 26 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 85
Query: 259 IRHRNLVKVFTACSGVDFQGNDF-KALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
RH N++ + ND +A E M + + + + E D L
Sbjct: 86 FRHENIIGI-----------NDIIRAPTIEQMKDVYI---VQDLMETDL-------YKLL 124
Query: 318 KRLNIAIDVACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
K +++ D C LKY+H + H DLKPSN+LL+ + DFG+AR
Sbjct: 125 KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 181
Query: 370 LEAADEQTRSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ + T + T Y APE + + + D++S G +L EM + RP
Sbjct: 182 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 234
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRN 258
+++ +++ + IG G +G V + VA+K + H + E ++
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 259 IRHRNLVKVFTACSGVDFQGNDF-KALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
RH N++ + ND +A E M + + + + E D L
Sbjct: 78 FRHENIIGI-----------NDIIRAPTIEQMKDVYI---VQDLMETDL-------YKLL 116
Query: 318 KRLNIAIDVACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
K +++ D C LKY+H + H DLKPSN+LL+ + DFG+AR
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 173
Query: 370 LEAADEQTRSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ + T + T Y APE + + + D++S G +L EM + RP
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 226
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG-VEGTTGY 388
LKY+H + H DLKPSN+LL+ + DFG+AR + + T + T Y
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 389 IAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
APE + + + D++S G +L EM + RP
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 230
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 138 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 191
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG-VEGTTGY 388
LKY+H + H DLKPSN+LL+ + DFG+AR + + T + T Y
Sbjct: 139 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 389 IAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
APE + + + D++S G +L EM + RP
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRN 258
+++ +++ + IG G +G V + VA+K + H + E ++
Sbjct: 23 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 82
Query: 259 IRHRNLVKVFTACSGVDFQGNDF-KALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
RH N++ + ND +A E M + + + + E D L
Sbjct: 83 FRHENIIGI-----------NDIIRAPTIEQMKDVYI---VQDLMETDL-------YKLL 121
Query: 318 KRLNIAIDVACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
K +++ D C LKY+H + H DLKPSN+LL+ + DFG+AR
Sbjct: 122 KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 178
Query: 370 LEAADEQTRSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ + T + T Y APE + + + D++S G +L EM + RP
Sbjct: 179 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 231
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRN 258
+++ +++ + IG G +G V + VA+K + H + E ++
Sbjct: 24 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 83
Query: 259 IRHRNLVKVFTACSGVDFQGNDF-KALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
RH N++ + ND +A E M + + + + E D L
Sbjct: 84 FRHENIIGI-----------NDIIRAPTIEQMKDVYI---VQDLMETDL-------YKLL 122
Query: 318 KRLNIAIDVACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
K +++ D C LKY+H + H DLKPSN+LL+ + DFG+AR
Sbjct: 123 KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 179
Query: 370 LEAADEQTRSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ + T + T Y APE + + + D++S G +L EM + RP
Sbjct: 180 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 232
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRN 258
+++ +++ + IG G +G V + VA+K + H + E ++
Sbjct: 15 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 74
Query: 259 IRHRNLVKVFTACSGVDFQGNDF-KALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
RH N++ + ND +A E M + + + + E D L
Sbjct: 75 FRHENIIGI-----------NDIIRAPTIEQMKDVYI---VQDLMETDL-------YKLL 113
Query: 318 KRLNIAIDVACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
K +++ D C LKY+H + H DLKPSN+LL+ + DFG+AR
Sbjct: 114 KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 170
Query: 370 LEAADEQTRSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ + T + T Y APE + + + D++S G +L EM + RP
Sbjct: 171 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 223
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRN 258
+++ +++ + IG G +G V + VA+K + H + E ++
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 259 IRHRNLVKVFTACSGVDFQGNDF-KALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
RH N++ + ND +A E M + + + + E D L
Sbjct: 82 FRHENIIGI-----------NDIIRAPTIEQMKDVYI---VQDLMETDL-------YKLL 120
Query: 318 KRLNIAIDVACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
K +++ D C LKY+H + H DLKPSN+LL+ + DFG+AR
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
Query: 370 LEAADEQTRSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ + T + T Y APE + + + D++S G +L EM + RP
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 230
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 131 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 184
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG-VEGTTGY 388
LKY+H + H DLKPSN+LL+ + DFG+AR + + T + T Y
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 389 IAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
APE + + + D++S G +L EM + RP
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 230
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 131 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 184
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 200 LYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA-SKSFAVECEVTRN 258
+++ +++ + IG G +G V + VA+K + H + E ++
Sbjct: 16 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 75
Query: 259 IRHRNLVKVFTACSGVDFQGNDF-KALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSL 317
RH N++ + ND +A E M + + + + E D L
Sbjct: 76 FRHENIIGI-----------NDIIRAPTIEQMKDVYI---VQDLMETDL-------YKLL 114
Query: 318 KRLNIAIDVACV--------LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
K +++ D C LKY+H + H DLKPSN+LL+ + DFG+AR
Sbjct: 115 KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 171
Query: 370 LEAADEQTRSIG-VEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
+ + T + T Y APE + + + D++S G +L EM + RP
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 224
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR A T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPYVVTRY 190
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTG 418
Y APE +G ++ D++S G ++ E+ G
Sbjct: 191 YRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 130 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 183
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG-VEGTTGY 388
LKY+H + H DLKPSN+LL+ + DFG+AR + + T + T Y
Sbjct: 135 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 389 IAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
APE + + + D++S G +L EM + RP
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 224
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG-VEGTTGY 388
LKY+H + H DLKPSN+LL+ + DFG+AR + + T + T Y
Sbjct: 139 LKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 389 IAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLRP 421
APE + + + D++S G +L EM + RP
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 228
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR T + T
Sbjct: 135 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYV---VTRY 188
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTG 418
Y APE +G D++S G ++ E+ G
Sbjct: 189 YRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAV-KVFNVLHHDASKSFAV-ECEVTRNIRHRNL 264
F IG G +G VYK + VA+ K+ + S A+ E + + + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+ + LV+EF+ ++ K+ L + I
Sbjct: 65 VKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLPLIKS 107
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ +L+ L + H DLKP N+L++ E ++DFG+AR A R+ E
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV 164
Query: 385 TT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
T Y APE +G S+ D++S G + EM T L P D
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAV-KVFNVLHHDASKSFAV-ECEVTRNIRHRNL 264
F IG G +G VYK + VA+ K+ + S A+ E + + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 265 VKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAI 324
VK+ + LV+EF+ ++ K+ L + I
Sbjct: 64 VKLLDVI-----HTENKLYLVFEFLH------------QDLKKFMDASALTGIPLPLIKS 106
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
+ +L+ L + H DLKP N+L++ E ++DFG+AR A R+ E
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV 163
Query: 385 TT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
T Y APE +G S+ D++S G + EM T L P D
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEA---ADEQTRSIGVEGT 385
L+YLH I H D+K N+LL D A + DFG A L+ + + GT
Sbjct: 179 LEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGT 235
Query: 386 TGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRPSDDMFKDNLNLR 433
++APE +G + DV+S ++L M G P F+ L L+
Sbjct: 236 ETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 283
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 16/93 (17%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR-----FLEAADEQTRSIGV 382
C +K+LH I H DLKPSNI++ + T + DFG+AR F+ + TR
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY--- 190
Query: 383 EGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 191 -----YRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 324 IDVACVLK-------YLHLDCQPPIAHCDLKPSNILLDD---EMTAYVSDFGIARFLEAA 373
+D A ++K YLH + I H DLKP N+LL+ + + DFG++ E
Sbjct: 104 VDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG 160
Query: 374 DEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ + GT YIAPE + + DV+S G++L + G P
Sbjct: 161 GKMKERL---GTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 324 IDVACVLK-------YLHLDCQPPIAHCDLKPSNILLDD---EMTAYVSDFGIARFLEAA 373
+D A ++K YLH + I H DLKP N+LL+ + + DFG++ E
Sbjct: 121 VDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG 177
Query: 374 DEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+ + GT YIAPE + + DV+S G++L + G P
Sbjct: 178 GKMKERL---GTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 6/139 (4%)
Query: 2 LSNNNLSGTLSPQLVGLSSLSIFNVSGNLLSGAISNNFGSCTSLEQLDMHGNLFAGPIXX 61
+S N L+G + P L+ L+ ++S N+L G S FGS + +++ + N A +
Sbjct: 181 ISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK 239
Query: 62 XXXXXXXXXXXXXXQNNLSDEIPEFLAGFKFLQNLNLSYNNFESMLPIEGIFKNASATSV 121
N + +P+ L KFL +LN+S+NN +P G + ++
Sbjct: 240 VGLSKNLNGLDLR-NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAY 298
Query: 122 FGNKKLCGGIPEFQLPTCV 140
NK LCG LP C
Sbjct: 299 ANNKCLCGS----PLPACT 313
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Query: 5 NNLSGTLSPQLVGLSSLSIFNVSGNLLSGAISNNFGSCTSLEQLDMHGNLFAGPIXXXXX 64
NNL G + P + L+ L ++ +SGAI + +L LD N +G +
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 65 XXXXXXXXXXXQNNLSDEIPEFLAGF-KFLQNLNLSYNNFESMLP 108
N +S IP+ F K ++ +S N +P
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP 191
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
Query: 53 NLFAGPIXXXXXXXXXXXXXXXXQNNLSDEIPEFLAGFKFLQNLNLSYNNFESMLPIE-G 111
N GPI N+S IP+FL+ K L L+ SYN LP
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 112 IFKNASATSVFGNKKLCGGIPE 133
N + GN ++ G IP+
Sbjct: 147 SLPNLVGITFDGN-RISGAIPD 167
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 32/241 (13%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAV---ECEVTRNIRHRNLVKV 267
++ G F VY+ S A+K +L ++ K+ A+ C + + H N+V+
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALK--RLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF 91
Query: 268 FTACSGVDFQGNDFKA--LVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+A S + + +A L+ + G L E++ K+ ++ G L+ L I
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQLVEFL-------KKMESRGPLSCDTVLKIFYQ 144
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE-----AADEQTRSI 380
++++H +PPI H DLK N+LL ++ T + DFG A + + Q R++
Sbjct: 145 TCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRAL 203
Query: 381 GVEGTTGYIAPEYGMGHEVSSYG--------DVYSFGILLLEMFTGLRPSDDMFKDNLNL 432
E T P Y + Y D+++ G +L + P F+D L
Sbjct: 204 VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP----FEDGAKL 259
Query: 433 R 433
R
Sbjct: 260 R 260
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 37/230 (16%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHD--ASKSFAVECEVTRNIRHRNLVKVFTA 270
+G G +G VYK I + VA+K + H + + E + + ++HRN++++ +
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 271 CSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
N L++E+ N L+++M + R + +N C+
Sbjct: 102 -----IHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCL- 154
Query: 331 KYLHLDCQPPIAHCDLKPSNILL-----DDEMTAYVSDFGIARFLEAADEQ-TRSIGVEG 384
H DLKP N+LL + + DFG+AR Q T I
Sbjct: 155 ------------HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEI---I 199
Query: 385 TTGYIAPEYGMG-HEVSSYGDVYSFGILLLEM------FTGLRPSDDMFK 427
T Y PE +G S+ D++S + EM F G D +FK
Sbjct: 200 TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK 249
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + + I+H N++ + ++ L+ E +A G L +++ +TEE+
Sbjct: 64 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
LN + YLH IAH DLKP NI+L D + DF
Sbjct: 119 FLKQILNGVY-------------YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G+A ++ +E + GT ++APE + D++S G++ + +G P
Sbjct: 163 GLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 142 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 195
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 196 YRAPEVILGMGYKENVDLWSVGCIMGEM 223
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 26/227 (11%)
Query: 203 ATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNV-LHHDASKSFAV-ECEVTRNIR 260
+ + F IG G +G VYK + VA+K + + S A+ E + + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 261 HRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRL 320
H N+VK+ + LV+E + ++ K+ L +
Sbjct: 64 HPNIVKLLDVI-----HTENKLYLVFEH------------VDQDLKKFMDASALTGIPLP 106
Query: 321 NIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSI 380
I + +L+ L + H DLKP N+L++ E ++DFG+AR A R+
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTY 163
Query: 381 GVEGTT-GYIAPEYGMG-HEVSSYGDVYSFGILLLEMFT--GLRPSD 423
E T Y APE +G S+ D++S G + EM T L P D
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 27/214 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHD--ASKSFAVECEVTRNIRHRNLVKVFTA 270
IG G +G+V+K E+ VA+K + D S E + + ++H+N+V++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH-- 67
Query: 271 CSGVDFQGNDFK-ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
D +D K LV+EF + L+++ G+L+ + +
Sbjct: 68 ----DVLHSDKKLTLVFEF-CDQDLKKYFDSCN---------GDLDPEIVKSFLFQLLKG 113
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT-GY 388
L + H + H DLKP N+L++ ++DFG+AR A R E T Y
Sbjct: 114 LGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLAR---AFGIPVRCYSAEVVTLWY 167
Query: 389 IAPEYGMGHEVSSYG-DVYSFGILLLEMFTGLRP 421
P+ G ++ S D++S G + E+ RP
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTG 387
C +K+LH I H DLKPSNI++ + T + DFG+AR + T + T
Sbjct: 131 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 184
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 185 YRAPEVILGMGYKENVDLWSVGCIMGEM 212
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 91/236 (38%), Gaps = 26/236 (11%)
Query: 188 PSISFPYVSYRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASK 247
P + Y S+ + + + +G G + V++ I + V VK+ + + K
Sbjct: 20 PREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK 79
Query: 248 SFAVECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKR 307
E ++ N+R + T V + ALV+E + N ++ +T+ D R
Sbjct: 80 R---EIKILENLR--GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR 134
Query: 308 HKAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAY-VSDFGI 366
++ L Y H I H D+KP N+++D E + D+G+
Sbjct: 135 F-------------YMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 367 ARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYG-DVYSFGILLLEMFTGLRP 421
A F E + G PE + +++ Y D++S G +L M P
Sbjct: 179 AEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 16/93 (17%)
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR-----FLEAADEQTRSIGV 382
C +K+LH I H DLKPSNI++ + T + DFG+AR F+ + TR
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY--- 190
Query: 383 EGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEM 415
Y APE +G D++S G ++ EM
Sbjct: 191 -----YRAPEVILGMGYKENVDLWSVGCIMGEM 218
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 341 IAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT-GYIAPEYGMGHEV 399
+ H DLKP N+L++ E ++DFG+AR A R+ E T Y APE +G +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 400 SSYG-DVYSFGILLLEMFT--GLRPSD 423
S D++S G + EM T L P D
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + + I+H N++ + ++ L+ E +A G L +++ +TEE+
Sbjct: 64 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
LN + YLH IAH DLKP NI+L D + DF
Sbjct: 119 FLKQILNGVY-------------YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G+A ++ +E + GT ++APE + D++S G++ + +G P
Sbjct: 163 GLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + + I+H N++ + ++ L+ E +A G L +++ +TEE+
Sbjct: 64 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
LN + YLH IAH DLKP NI+L D + DF
Sbjct: 119 FLKQILNGVY-------------YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G+A ++ +E + GT ++APE + D++S G++ + +G P
Sbjct: 163 GLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + + I+H N++ + ++ L+ E +A G L +++ +TEE+
Sbjct: 64 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
LN + YLH IAH DLKP NI+L D + DF
Sbjct: 119 FLKQILNGVY-------------YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G+A ++ +E + GT ++APE + D++S G++ + +G P
Sbjct: 163 GLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + + I+H N++ + ++ L+ E +A G L +++ +TEE+
Sbjct: 64 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
LN + YLH IAH DLKP NI+L D + DF
Sbjct: 119 FLKQILNGVY-------------YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G+A ++ +E + GT ++APE + D++S G++ + +G P
Sbjct: 163 GLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + + I+H N++ + ++ L+ E +A G L +++ +TEE+
Sbjct: 64 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
LN + YLH IAH DLKP NI+L D + DF
Sbjct: 119 FLKQILNGVY-------------YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G+A ++ +E + GT ++APE + D++S G++ + +G P
Sbjct: 163 GLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 37/234 (15%)
Query: 210 ENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA--SKSFAVECEVTRNIRHRNLVKV 267
++LIG G++G VY + VA+K N + D K E + ++ ++++
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 268 FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVA 327
+ D D +V E +A+ L+ K K P L I ++
Sbjct: 91 YDLIIPDDLLKFDELYIVLE-IADSDLK----------KLFKTPIFLTEEHIKTILYNLL 139
Query: 328 CVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG--- 384
++H + I H DLKP+N LL+ + + V DFG+AR + + + +E
Sbjct: 140 LGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEE 196
Query: 385 -----------------TTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTGLR 420
T Y APE + E + D++S G + E+ L+
Sbjct: 197 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQ 250
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + + I+H N++ + ++ L+ E +A G L +++ +TEE+
Sbjct: 64 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
LN + YLH IAH DLKP NI+L D + DF
Sbjct: 119 FLKQILNGVY-------------YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G+A ++ +E + GT ++APE + D++S G++ + +G P
Sbjct: 163 GLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + + I+H N++ + ++ L+ E +A G L +++ +TEE+
Sbjct: 64 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
LN + YLH IAH DLKP NI+L D + DF
Sbjct: 119 FLKQILNGVY-------------YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G+A ++ +E + GT ++APE + D++S G++ + +G P
Sbjct: 163 GLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 23/143 (16%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEE--WMHPITEEDKRHK 309
E + + + H N+VK+ +D D +V+E + G + E + P++E+ R
Sbjct: 86 EIAILKKLDHPNVVKLVEV---LDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFY 142
Query: 310 APGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
D+ ++YLH I H D+KPSN+L+ ++ ++DFG++
Sbjct: 143 FQ-------------DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 370 LEAADEQTRSIGVEGTTGYIAPE 392
+ +D + GT ++APE
Sbjct: 187 FKGSDALLSN--TVGTPAFMAPE 207
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + + I+H N++ + ++ L+ E +A G L +++ +TEE+
Sbjct: 64 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
LN + YLH IAH DLKP NI+L D + DF
Sbjct: 119 FLKQILNGVY-------------YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G+A ++ +E + GT ++APE + D++S G++ + +G P
Sbjct: 163 GLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + + I+H N++ + ++ L+ E +A G L +++ +TEE+
Sbjct: 64 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
LN + YLH IAH DLKP NI+L D + DF
Sbjct: 119 FLKQILNGVY-------------YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G+A ++ +E + GT ++APE + D++S G++ + +G P
Sbjct: 163 GLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 88/218 (40%), Gaps = 29/218 (13%)
Query: 204 TKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFN--------VLHHDASKSFAVECEV 255
++ +S+ + +G+G FG V+ + E V VK + +E +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 256 TRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLN 315
+ H N++KV F+ F LV E +G L+ + + R P
Sbjct: 83 LSRVEHANIIKVLDI-----FENQGFFQLVMEKHGSG-LD--LFAFIDRHPRLDEPLASY 134
Query: 316 SLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADE 375
++L A+ YL L I H D+K NI++ ++ T + DFG A +LE
Sbjct: 135 IFRQLVSAVG------YLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG-- 183
Query: 376 QTRSIGVEGTTGYIAPEYGMGHEVSSYG-DVYSFGILL 412
GT Y APE MG+ +++S G+ L
Sbjct: 184 -KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTL 220
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + + I+H N++ + ++ L+ E +A G L +++ +TEE+
Sbjct: 63 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
LN + YLH IAH DLKP NI+L D + DF
Sbjct: 118 FLKQILNGVY-------------YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 161
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G+A ++ +E + GT ++APE + D++S G++ + +G P
Sbjct: 162 GLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + + I+H N++ + ++ L+ E +A G L +++ +TEE+
Sbjct: 63 EVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
LN + YLH IAH DLKP NI+L D + DF
Sbjct: 118 FLKQILNGVY-------------YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 161
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G+A ++ +E + GT ++APE + D++S G++ + +G P
Sbjct: 162 GLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEM---TAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
YLH Q I H DLKP NILL + DFG++R + A E + GT Y
Sbjct: 146 YLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELRE---IMGTPEY 199
Query: 389 IAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
+APE +++ D+++ GI+ + T P
Sbjct: 200 LAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
+K+LH I H DLKPSNI++ + T + DFG+AR + T + T Y
Sbjct: 132 IKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV---VTRYYR 185
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEM 415
APE +G D++S G ++ EM
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
+K+LH I H DLKPSNI++ + T + DFG+AR + T + T Y
Sbjct: 139 IKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV---VTRYYR 192
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEM 415
APE +G D++S G ++ EM
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYI 389
+K+LH I H DLKPSNI++ + T + DFG+AR + T + T Y
Sbjct: 139 IKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV---VTRYYR 192
Query: 390 APEYGMGHEVSSYGDVYSFGILLLEM 415
APE +G D++S G ++ EM
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 206 GFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDA--SKSFAVECEVTRNIRHRN 263
+ ++LIG G++G VY + VA+K N + D K E + ++
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 264 LVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIA 323
++++ D D +V E +A+ L+ K K P L I
Sbjct: 89 IIRLHDLIIPEDLLKFDELYIVLE-IADSDLK----------KLFKTPIFLTEQHVKTIL 137
Query: 324 IDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIAR 368
++ K++H + I H DLKP+N LL+ + + + DFG+AR
Sbjct: 138 YNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 44/245 (17%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVK----VF 268
IGAGNFG ++ VAVK ++ E R++RH N+V+ +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 269 TACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRHKAPGNLNSLKRLNIAID 325
T A+V E+ + G L E + +E++ R ++L +
Sbjct: 86 TPTH---------LAIVMEYASGGELFERICNAGRFSEDEARF-------FFQQLISGVS 129
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAY--VSDFGIARFLEAADEQTRSIGVE 383
A ++ +AH DLK N LLD ++DFG ++ A+ ++
Sbjct: 130 YAHAMQ---------VAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAV 177
Query: 384 GTTGYIAPEYGMGHEVS-SYGDVYSFGILLLEMFTGLRPSDDM-----FKDNLNLRNCVK 437
GT YIAPE + E DV+S G+ L M G P +D F+ ++ V+
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ 237
Query: 438 SALPE 442
A+P+
Sbjct: 238 YAIPD 242
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 23/217 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNI-----RH 261
+ ++LIG G+FG V K VA+K+ K+F + ++ + +H
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLLELMNKH 110
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
+K + F + LV+E ++ ++ + NL
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN-----LYDLLRNTNFRGVSLNLTR----K 161
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + L +L + I HCDLKP NILL + + + I F + R
Sbjct: 162 FAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIK---IVDFGSSCQLGQRIYQ 217
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTG 418
+ Y +PE +G D++S G +L+EM TG
Sbjct: 218 XIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 105/269 (39%), Gaps = 67/269 (24%)
Query: 197 YRMLYNATKGFSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVT 256
Y + + F E+ IG G F SVY L + V + L H S
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVY---LATAQLQVGPEEKIALKHLIPTSHP------ 63
Query: 257 RNIRHRNLVKVFTACSGVD--------FQGNDFKALVYEFMANGSLEEWMHPITEEDKRH 308
IR ++ T G D F+ ND + ++ + S + ++ ++ ++ R
Sbjct: 64 --IRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVRE 121
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAY-VSDFGIA 367
+LKR++ Q I H D+KPSN L + + Y + DFG+A
Sbjct: 122 YMLNLFKALKRIH----------------QFGIVHRDVKPSNFLYNRRLKKYALVDFGLA 165
Query: 368 -----------RFLEAADEQTR------SIGVE---------GTTGYIAPEY-GMGHEVS 400
+F+++ +Q R SI + GT G+ APE +
Sbjct: 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQT 225
Query: 401 SYGDVYSFGILLLEMFTGLRP----SDDM 425
+ D++S G++ L + +G P SDD+
Sbjct: 226 TAIDMWSAGVIFLSLLSGRYPFYKASDDL 254
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 84/219 (38%), Gaps = 27/219 (12%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNI-----RH 261
+ ++LIG G+FG V K VA+K+ K+F + ++ + +H
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLLELMNKH 110
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
+K + F + LV+E ++ ++ + NL
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN-----LYDLLRNTNFRGVSLNLTR----K 161
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILL--DDEMTAYVSDFGIARFLEAADEQTRS 379
A + L +L + I HCDLKP NILL + DFG + R
Sbjct: 162 FAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRXAIKIVDFG-----SSCQLGQRI 215
Query: 380 IGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTG 418
+ Y +PE +G D++S G +L+EM TG
Sbjct: 216 YQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 23/217 (10%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNI-----RH 261
+ ++LIG G+FG V K VA+K+ K+F + ++ + +H
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLLELMNKH 91
Query: 262 RNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLN 321
+K + F + LV+E ++ ++ + NL
Sbjct: 92 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN-----LYDLLRNTNFRGVSLNLTR----K 142
Query: 322 IAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIG 381
A + L +L + I HCDLKP NILL + + + I F + R
Sbjct: 143 FAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIK---IVDFGSSCQLGQRIYQ 198
Query: 382 VEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTG 418
+ Y +PE +G D++S G +L+EM TG
Sbjct: 199 XIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKALVYEFMANGSLEEWM---HPITEEDKRH 308
E + + I+H N++ + ++ L+ E +A G L +++ +TEE+
Sbjct: 64 EVSILKEIQHPNVITLHEV-----YENKTDVILIGELVAGGELFDFLAEKESLTEEEATE 118
Query: 309 KAPGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT----AYVSDF 364
LN + YLH IAH DLKP NI+L D + DF
Sbjct: 119 FLKQILNGVY-------------YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 365 GIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
G+A ++ +E + GT ++APE + D++S G++ + +G P
Sbjct: 163 GLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAY----VSDFGIARFLEAADEQTRSIGVEGTTG 387
YLH IAH DLKP NI+L D+ + DFG+A +E E + GT
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPE 183
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
++APE + D++S G++ + +G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAY----VSDFGIARFLEAADEQTRSIGVEGTTG 387
YLH IAH DLKP NI+L D+ + DFG+A +E E + GT
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPE 183
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
++APE + D++S G++ + +G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 96/241 (39%), Gaps = 36/241 (14%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN----LVKV 267
L+G+G FGSVY GI VA+K H + E+ R L KV
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIK------HVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 268 FTACSGV-----DFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
+ SGV F+ D L+ E M +++ ITE G L +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERME--PVQDLFDFITER-------GALQEELARSF 119
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIG 381
V +++ H +C + H D+K NIL+D + + DFG L + T
Sbjct: 120 FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTD 172
Query: 382 VEGTTGYIAPEYGMGHEVSSY-GDVYSFGILLLEMFTGLRP---SDDMFKDNLNLRNCVK 437
+GT Y PE+ H V+S GILL +M G P +++ + + R V
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 232
Query: 438 S 438
S
Sbjct: 233 S 233
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAY----VSDFGIARFLEAADEQTRSIGVEGTTG 387
YLH IAH DLKP NI+L D+ + DFG+A +E E + GT
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPE 183
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
++APE + D++S G++ + +G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAY----VSDFGIARFLEAADEQTRSIGVEGTTG 387
YLH IAH DLKP NI+L D+ + DFG+A +E E + GT
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPE 183
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
++APE + D++S G++ + +G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAY----VSDFGIARFLEAADEQTRSIGVEGTTG 387
YLH IAH DLKP NI+L D+ + DFG+A +E E + GT
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPE 183
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
++APE + D++S G++ + +G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 31/219 (14%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRNLVKVFTACS 272
IG+G+FG +Y G ++ VA+K+ NV E ++ R +++ T
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIKLENV--KTKHPQLLYESKIYR------ILQGGTGIP 66
Query: 273 GVDFQG--NDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVL 330
V + G D+ LV + + SLE+ + + + L+ L +A + +
Sbjct: 67 NVRWFGVEGDYNVLVMDLLGP-SLEDLFNFCSRK---------LSLKTVLMLADQMINRV 116
Query: 331 KYLHLDCQPPIAHCDLKPSNILLDDEMTA---YVSDFGIA-RFLEAADEQ----TRSIGV 382
+++H H D+KP N L+ A Y+ DFG+A ++ + + Q + +
Sbjct: 117 EFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNL 173
Query: 383 EGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT Y + +G E S D+ S G +L+ G P
Sbjct: 174 TGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 212
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 24/219 (10%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVE-----CEVTRNIRHRNLV 265
+IG G F V + I E+ AVK+ +V +S + E + ++H ++V
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
++ + + +V+EFM L E KR A + +
Sbjct: 92 ELLET-----YSSDGMLYMVFEFMDGADL------CFEIVKRADAGFVYSEAVASHYMRQ 140
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADEQTRSIGV 382
+ L+Y H + I H D+KP +LL ++ + FG+A ++ + + G
Sbjct: 141 ILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGR 195
Query: 383 EGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT ++APE DV+ G++L + +G P
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 80/212 (37%), Gaps = 26/212 (12%)
Query: 219 GSVYKGILFESTTAVAVKVFNVLHHDASKS--FAVECEVTRNIRHRNLVKVFTACSGVDF 276
G ++KG + VKV V KS F EC R H N++ V AC
Sbjct: 24 GELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS--- 78
Query: 277 QGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACVLKYLHLD 336
L+ + GSL +H T ++ + + A+D A +LH
Sbjct: 79 PPAPHPTLITHWXPYGSLYNVLHEGTN--------FVVDQSQAVKFALDXARGXAFLHT- 129
Query: 337 CQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMG 396
+P I L ++ +D++ TA +S + + S G ++APE
Sbjct: 130 LEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQ-------SPGRXYAPAWVAPEALQK 182
Query: 397 HEVSS---YGDVYSFGILLLEMFTGLRPSDDM 425
+ D +SF +LL E+ T P D+
Sbjct: 183 KPEDTNRRSADXWSFAVLLWELVTREVPFADL 214
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 209 SENLIGAGNFGSVYKGILFESTTAVAVKVF-NVLHHDASKSFAVECEVTRNIR-HRNLVK 266
+ L+G G + V + ++ AVK+ H S+ F E E + ++N+++
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFR-EVETLYQCQGNKNILE 75
Query: 267 VFTACSGVDFQGNDFK-ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
+ ++F +D + LV+E + GS I ++ K + N + + D
Sbjct: 76 L------IEFFEDDTRFYLVFEKLQGGS-------ILAHIQKQK---HFNEREASRVVRD 119
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILLDDEMT---AYVSDFGIARFLEAADEQTRSIGV 382
VA L +LH IAH DLKP NIL + + DF + ++ + T
Sbjct: 120 VAAALDFLHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTP 176
Query: 383 E-----GTTGYIAPEY--GMGHEVSSYG---DVYSFGILLLEMFTGLRP 421
E G+ Y+APE + + Y D++S G++L M +G P
Sbjct: 177 ELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLE---------------AAD 374
L Y+H I H +LKP NI +D+ + DFG+A+ + ++D
Sbjct: 129 LSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 375 EQTRSIGVEGTTGYIAPEY--GMGHEVSSYGDVYSFGILLLE 414
T +I GT Y+A E G GH + D YS GI+ E
Sbjct: 186 NLTSAI---GTAXYVATEVLDGTGH-YNEKIDXYSLGIIFFE 223
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+L+ +H Q I H DLKP+N L+ D M + DFGIA ++ GT Y
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 389 IAPEYGMGHEVS-----------SYGDVYSFGILLLEMFTGLRP 421
+ PE S DV+S G +L M G P
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+L+ +H Q I H DLKP+N L+ D M + DFGIA ++ GT Y
Sbjct: 117 MLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNY 175
Query: 389 IAPEYGMGHEVS-----------SYGDVYSFGILLLEMFTGLRP 421
+ PE S DV+S G +L M G P
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 24/219 (10%)
Query: 211 NLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVE-----CEVTRNIRHRNLV 265
+IG G F V + I E+ AVK+ +V +S + E + ++H ++V
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 266 KVFTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAID 325
++ + + +V+EFM L E KR A + +
Sbjct: 90 ELLET-----YSSDGMLYMVFEFMDGADL------CFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 326 VACVLKYLHLDCQPPIAHCDLKPSNILL---DDEMTAYVSDFGIARFLEAADEQTRSIGV 382
+ L+Y H + I H D+KP +LL ++ + FG+A ++ + + G
Sbjct: 139 ILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGR 193
Query: 383 EGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
GT ++APE DV+ G++L + +G P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 332 YLHLDCQPPIAHCDLKPSNILLDDEMTAY----VSDFGIARFLEAADEQTRSIGVEGTTG 387
YLH IAH DLKP NI+L D+ + DFG+A +E E + GT
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPE 183
Query: 388 YIAPEYGMGHEVSSYGDVYSFGILLLEMFTGLRP 421
++APE + D++S G++ + +G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 27/214 (12%)
Query: 213 IGAGNFGSVYKGILFESTTAVAVKVFNVLHHD--ASKSFAVECEVTRNIRHRNLVKVFTA 270
IG G +G+V+K E+ VA+K + D S E + + ++H+N+V++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH-- 67
Query: 271 CSGVDFQGNDFK-ALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNIAIDVACV 329
D +D K LV+EF + L+++ G+L+ + +
Sbjct: 68 ----DVLHSDKKLTLVFEF-CDQDLKKYFDSCN---------GDLDPEIVKSFLFQLLKG 113
Query: 330 LKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTT-GY 388
L + H + H DLKP N+L++ +++FG+AR A R E T Y
Sbjct: 114 LGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLAR---AFGIPVRCYSAEVVTLWY 167
Query: 389 IAPEYGMGHEVSSYG-DVYSFGILLLEMFTGLRP 421
P+ G ++ S D++S G + E+ RP
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+L+ +H Q I H DLKP+N L+ D M + DFGIA ++ GT Y
Sbjct: 120 MLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNY 178
Query: 389 IAPEYGMGHEVS-----------SYGDVYSFGILLLEMFTGLRP 421
+ PE S DV+S G +L M G P
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+L+ +H Q I H DLKP+N L+ D M + DFGIA ++ GT Y
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 389 IAPEYGMGHEVS-----------SYGDVYSFGILLLEMFTGLRP 421
+ PE S DV+S G +L M G P
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+L+ +H Q I H DLKP+N L+ D M + DFGIA ++ GT Y
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNY 194
Query: 389 IAPEYGMGHEVS-----------SYGDVYSFGILLLEMFTGLRP 421
+ PE S DV+S G +L M G P
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+L+ +H Q I H DLKP+N L+ D M + DFGIA ++ GT Y
Sbjct: 116 MLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNY 174
Query: 389 IAPEYGMGHEVS-----------SYGDVYSFGILLLEMFTGLRP 421
+ PE S DV+S G +L M G P
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+L+ +H Q I H DLKP+N L+ D M + DFGIA ++ GT Y
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNY 194
Query: 389 IAPEYGMGHEVS-----------SYGDVYSFGILLLEMFTGLRP 421
+ PE S DV+S G +L M G P
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 84/201 (41%), Gaps = 24/201 (11%)
Query: 252 ECEVTRNIRHRNLVKVFTACSGVDFQGNDFKA-LVYEFMANGSLEEWMHPITEEDKRHKA 310
E ++ R H N++++ C + +G +A L+ F G+L W E +R K
Sbjct: 76 EADMHRLFNHPNILRLVAYC--LRERGAKHEAWLLLPFFKRGTL--W-----NEIERLKD 126
Query: 311 PGN-LNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARF 369
GN L + L + + + L+ +H AH DLKP+NILL DE + D G
Sbjct: 127 KGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183
Query: 370 LEAADEQTRS-------IGVEGTTGYIAPEYGMGHE---VSSYGDVYSFGILLLEMFTGL 419
E +R T Y APE + DV+S G +L M G
Sbjct: 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
Query: 420 RPSDDMFKDNLNLRNCVKSAL 440
P D +F+ ++ V++ L
Sbjct: 244 GPYDMVFQKGDSVALAVQNQL 264
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%)
Query: 343 HCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSY 402
H DL NILL + DFG+AR ++ ++APE +
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 250
Query: 403 GDVYSFGILLLEMFT 417
DV+S+GI L E+F+
Sbjct: 251 SDVWSYGIFLWELFS 265
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 22/148 (14%)
Query: 311 PGNLNSLKRLNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILL--------------DDE 356
P L+ ++++ A + + +LH + + H DLKP NIL DE
Sbjct: 114 PFRLDHIRKM--AYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDE 168
Query: 357 MTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSYGDVYSFGILLLEMF 416
T D + F A + + T Y APE + S DV+S G +L+E +
Sbjct: 169 RTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYY 228
Query: 417 TGLR--PSDDMFKDNLNLRNCVKSALPE 442
G P+ D K++L + + LP+
Sbjct: 229 LGFTVFPTHDS-KEHLAMMERILGPLPK 255
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 325 DVACVLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEG 384
D L +LH + H D+KP+NI L + DFG+ L A EG
Sbjct: 165 DTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ---EG 218
Query: 385 TTGYIAPEYGMGHEVSSYG---DVYSFGILLLEM 415
Y+APE G SYG DV+S G+ +LE+
Sbjct: 219 DPRYMAPELLQG----SYGTAADVFSLGLTILEV 248
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 100/221 (45%), Gaps = 26/221 (11%)
Query: 207 FSSENLIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRN---IRHRN 263
F E + G G FG+V G E +T ++V + V+ ++ E ++ ++ + H N
Sbjct: 25 FQVERMAGQGTFGTVQLGK--EKSTGMSVAIKKVIQDPRFRN--RELQIMQDLAVLHHPN 80
Query: 264 LVKV--FTACSGVDFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKA--PGNLNSLKR 319
+V++ + G + + + +V E++ + +H R + P L +
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPDT-----LHRCCRNYYRRQVAPPPILIKVFL 135
Query: 320 LNIAIDVACVLKYLHLDCQPPIAHCDLKPSNILLDD-EMTAYVSDFGIARFLEAADEQTR 378
+ + C LHL + H D+KP N+L+++ + T + DFG A+ L ++
Sbjct: 136 FQLIRSIGC----LHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
Query: 379 SIGVEGTTGYIAPEYGMGHE-VSSYGDVYSFGILLLEMFTG 418
I + Y APE G++ ++ D++S G + EM G
Sbjct: 191 YI---CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN----LVKV 267
L+G+G FGSVY GI VA+K H + E+ R L KV
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIK------HVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 268 FTACSGV-----DFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
+ SGV F+ D L+ E +++ ITE G L +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITER-------GALQEELARSF 162
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIG 381
V +++ H +C + H D+K NIL+D + + DFG L + T
Sbjct: 163 FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTD 215
Query: 382 VEGTTGYIAPEYGMGHEVSSY-GDVYSFGILLLEMFTGLRP---SDDMFKDNLNLRNCVK 437
+GT Y PE+ H V+S GILL +M G P +++ + + R V
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 275
Query: 438 S 438
S
Sbjct: 276 S 276
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN----LVKV 267
L+G+G FGSVY GI VA+K H + E+ R L KV
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIK------HVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 268 FTACSGV-----DFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
+ SGV F+ D L+ E +++ ITE G L +
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITER-------GALQEELARSF 154
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIG 381
V +++ H +C + H D+K NIL+D + + DFG L + T
Sbjct: 155 FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTD 207
Query: 382 VEGTTGYIAPEYGMGHEVSSY-GDVYSFGILLLEMFTGLRP---SDDMFKDNLNLRNCVK 437
+GT Y PE+ H V+S GILL +M G P +++ + + R V
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 267
Query: 438 S 438
S
Sbjct: 268 S 268
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN----LVKV 267
L+G+G FGSVY GI VA+K H + E+ R L KV
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIK------HVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 268 FTACSGV-----DFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
+ SGV F+ D L+ E +++ ITE G L +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITER-------GALQEELARSF 135
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIG 381
V +++ H +C + H D+K NIL+D + + DFG L + T
Sbjct: 136 FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTD 188
Query: 382 VEGTTGYIAPEYGMGHEVSSY-GDVYSFGILLLEMFTGLRP---SDDMFKDNLNLRNCVK 437
+GT Y PE+ H V+S GILL +M G P +++ + + R V
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 248
Query: 438 S 438
S
Sbjct: 249 S 249
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%)
Query: 343 HCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSY 402
H DL NILL + DFG+AR ++ ++APE +
Sbjct: 184 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 243
Query: 403 GDVYSFGILLLEMFT 417
DV+S+GI L E+F+
Sbjct: 244 SDVWSYGIFLWELFS 258
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN----LVKV 267
L+G+G FGSVY GI VA+K H + E+ R L KV
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIK------HVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 268 FTACSGV-----DFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
+ SGV F+ D L+ E +++ ITE G L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITER-------GALQEELARSF 120
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIG 381
V +++ H +C + H D+K NIL+D + + DFG L + T
Sbjct: 121 FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTD 173
Query: 382 VEGTTGYIAPEYGMGHEVSSY-GDVYSFGILLLEMFTGLRP---SDDMFKDNLNLRNCVK 437
+GT Y PE+ H V+S GILL +M G P +++ + + R V
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 233
Query: 438 S 438
S
Sbjct: 234 S 234
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN----LVKV 267
L+G+G FGSVY GI VA+K H + E+ R L KV
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIK------HVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 268 FTACSGV-----DFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
+ SGV F+ D L+ E +++ ITE G L +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITER-------GALQEELARSF 134
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIG 381
V +++ H +C + H D+K NIL+D + + DFG L + T
Sbjct: 135 FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTD 187
Query: 382 VEGTTGYIAPEYGMGHEVSSY-GDVYSFGILLLEMFTGLRP---SDDMFKDNLNLRNCVK 437
+GT Y PE+ H V+S GILL +M G P +++ + + R V
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 247
Query: 438 S 438
S
Sbjct: 248 S 248
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+L LH+ + + H DL P NILL D + DF +AR A +T + Y
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYV---THRWY 199
Query: 389 IAPEYGMGHE-VSSYGDVYSFGILLLEMF 416
APE M + + D++S G ++ EMF
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 329 VLKYLHLDCQPPIAHCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGY 388
+L LH+ + + H DL P NILL D + DF +AR A +T + Y
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYV---THRWY 199
Query: 389 IAPEYGMGHE-VSSYGDVYSFGILLLEMF 416
APE M + + D++S G ++ EMF
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN----LVKV 267
L+G+G FGSVY GI VA+K H + E+ R L KV
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIK------HVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 268 FTACSGV-----DFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
+ SGV F+ D L+ E +++ ITE G L +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITER-------GALQEELARSF 147
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIG 381
V +++ H +C + H D+K NIL+D + + DFG L + T
Sbjct: 148 FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTD 200
Query: 382 VEGTTGYIAPEYGMGHEVSSY-GDVYSFGILLLEMFTGLRP---SDDMFKDNLNLRNCVK 437
+GT Y PE+ H V+S GILL +M G P +++ + + R V
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 260
Query: 438 S 438
S
Sbjct: 261 S 261
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%)
Query: 343 HCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSY 402
H DL NILL + DFG+AR ++ ++APE +
Sbjct: 168 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 227
Query: 403 GDVYSFGILLLEMFT 417
DV+S+GI L E+F+
Sbjct: 228 SDVWSYGIFLWELFS 242
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%)
Query: 343 HCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSY 402
H DL NILL + DFG+AR ++ ++APE +
Sbjct: 186 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 245
Query: 403 GDVYSFGILLLEMFT 417
DV+S+GI L E+F+
Sbjct: 246 SDVWSYGIFLWELFS 260
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN----LVKV 267
L+G+G FGSVY GI VA+K H + E+ R L KV
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIK------HVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 268 FTACSGV-----DFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
+ SGV F+ D L+ E +++ ITE G L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITER-------GALQEELARSF 120
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIG 381
V +++ H +C + H D+K NIL+D + + DFG L + T
Sbjct: 121 FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTD 173
Query: 382 VEGTTGYIAPEYGMGHEVSSY-GDVYSFGILLLEMFTGLRP---SDDMFKDNLNLRNCVK 437
+GT Y PE+ H V+S GILL +M G P +++ + + R V
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 233
Query: 438 S 438
S
Sbjct: 234 S 234
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 87/221 (39%), Gaps = 33/221 (14%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN----LVKV 267
L+G+G FGSVY GI VA+K H + E+ R L KV
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIK------HVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 268 FTACSGV-----DFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
+ SGV F+ D L+ E +++ ITE G L +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITER-------GALQEELARSF 162
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIG 381
V +++ H +C + H D+K NIL+D + + DFG L + T
Sbjct: 163 FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTD 215
Query: 382 VEGTTGYIAPEYGMGHEVSSY-GDVYSFGILLLEMFTGLRP 421
+GT Y PE+ H V+S GILL +M G P
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN----LVKV 267
L+G+G FGSVY GI VA+K H + E+ R L KV
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIK------HVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 268 FTACSGV-----DFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
+ SGV F+ D L+ E +++ ITE G L +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITER-------GALQEELARSF 119
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIG 381
V +++ H +C + H D+K NIL+D + + DFG L + T
Sbjct: 120 FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTD 172
Query: 382 VEGTTGYIAPEYGMGHEVSSY-GDVYSFGILLLEMFTGLRP---SDDMFKDNLNLRNCVK 437
+GT Y PE+ H V+S GILL +M G P +++ + + R V
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 232
Query: 438 S 438
S
Sbjct: 233 S 233
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%)
Query: 343 HCDLKPSNILLDDEMTAYVSDFGIARFLEAADEQTRSIGVEGTTGYIAPEYGMGHEVSSY 402
H DL NILL + DFG+AR ++ ++APE +
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 250
Query: 403 GDVYSFGILLLEMFT 417
DV+S+GI L E+F+
Sbjct: 251 SDVWSYGIFLWELFS 265
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 87/221 (39%), Gaps = 33/221 (14%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN----LVKV 267
L+G+G FGSVY GI VA+K H + E+ R L KV
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIK------HVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 268 FTACSGV-----DFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
+ SGV F+ D L+ E +++ ITE G L +
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITER-------GALQEELARSF 167
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIG 381
V +++ H +C + H D+K NIL+D + + DFG L + T
Sbjct: 168 FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTD 220
Query: 382 VEGTTGYIAPEYGMGHEVSSY-GDVYSFGILLLEMFTGLRP 421
+GT Y PE+ H V+S GILL +M G P
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 212 LIGAGNFGSVYKGILFESTTAVAVKVFNVLHHDASKSFAVECEVTRNIRHRN----LVKV 267
L+G+G FGSVY GI VA+K H + E+ R L KV
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIK------HVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 268 FTACSGV-----DFQGNDFKALVYEFMANGSLEEWMHPITEEDKRHKAPGNLNSLKRLNI 322
+ SGV F+ D L+ E +++ ITE G L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITER-------GALQEELARSF 120
Query: 323 AIDVACVLKYLHLDCQPPIAHCDLKPSNILLD-DEMTAYVSDFGIARFLEAADEQTRSIG 381
V +++ H +C + H D+K NIL+D + + DFG L + T
Sbjct: 121 FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTD 173
Query: 382 VEGTTGYIAPEYGMGHEVSSY-GDVYSFGILLLEMFTGLRP---SDDMFKDNLNLRNCVK 437
+GT Y PE+ H V+S GILL +M G P +++ + + R V
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 233
Query: 438 S 438
S
Sbjct: 234 S 234
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,236,087
Number of Sequences: 62578
Number of extensions: 504829
Number of successful extensions: 3435
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 422
Number of HSP's that attempted gapping in prelim test: 1533
Number of HSP's gapped (non-prelim): 1245
length of query: 502
length of database: 14,973,337
effective HSP length: 103
effective length of query: 399
effective length of database: 8,527,803
effective search space: 3402593397
effective search space used: 3402593397
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)