Query 046120
Match_columns 381
No_of_seqs 257 out of 1721
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 15:33:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046120.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046120hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n71_A Histone lysine methyltr 100.0 2.2E-49 7.6E-54 401.8 17.9 265 1-285 1-283 (490)
2 3qww_A SET and MYND domain-con 100.0 2.3E-49 8E-54 395.8 16.0 255 6-285 7-271 (433)
3 3qwp_A SET and MYND domain-con 100.0 1.5E-48 5E-53 390.2 14.5 254 6-285 5-271 (429)
4 3rq4_A Histone-lysine N-methyl 99.6 5.2E-16 1.8E-20 142.1 3.2 82 180-285 155-237 (247)
5 3s8p_A Histone-lysine N-methyl 99.4 1.4E-13 4.9E-18 127.3 3.8 83 179-284 183-265 (273)
6 3smt_A Histone-lysine N-methyl 99.3 7.3E-12 2.5E-16 126.6 13.6 94 165-277 236-329 (497)
7 3ooi_A Histone-lysine N-methyl 99.3 5.7E-12 1.9E-16 115.1 10.6 59 208-279 165-223 (232)
8 1n3j_A A612L, histone H3 lysin 99.3 1.3E-12 4.5E-17 107.0 4.0 55 202-261 58-112 (119)
9 3qxy_A N-lysine methyltransfer 99.2 1.3E-10 4.3E-15 116.2 15.4 96 166-277 183-278 (449)
10 2w5y_A Histone-lysine N-methyl 99.2 9.1E-12 3.1E-16 110.2 4.8 63 208-283 124-189 (192)
11 3f9x_A Histone-lysine N-methyl 99.1 3.2E-11 1.1E-15 104.4 2.8 58 209-269 108-165 (166)
12 3ope_A Probable histone-lysine 99.0 1.4E-10 4.9E-15 105.1 3.8 64 208-283 146-211 (222)
13 3hna_A Histone-lysine N-methyl 98.9 3E-10 1E-14 106.6 1.6 67 204-278 211-279 (287)
14 3h6l_A Histone-lysine N-methyl 98.9 5.6E-10 1.9E-14 104.3 3.4 58 208-279 190-248 (278)
15 2odd_A Protein CBFA2T1; MYND z 98.9 2E-10 6.9E-15 83.2 -0.2 57 24-97 2-59 (64)
16 1ml9_A Histone H3 methyltransf 98.8 1.8E-09 6E-14 102.4 4.2 75 208-282 220-298 (302)
17 2r3a_A Histone-lysine N-methyl 98.8 3.8E-09 1.3E-13 99.7 5.3 75 208-282 215-296 (300)
18 1mvh_A Cryptic LOCI regulator 98.8 3.9E-09 1.3E-13 99.7 5.3 52 208-259 213-265 (299)
19 2f69_A Histone-lysine N-methyl 98.7 6.1E-09 2.1E-13 96.4 4.1 49 209-259 187-235 (261)
20 3bo5_A Histone-lysine N-methyl 98.6 1.9E-08 6.6E-13 94.5 5.2 50 208-260 205-255 (290)
21 1h3i_A Histone H3 lysine 4 spe 98.6 2.5E-08 8.6E-13 94.0 4.1 47 209-258 241-288 (293)
22 2qpw_A PR domain zinc finger p 98.5 4.9E-08 1.7E-12 82.6 4.6 45 209-260 100-147 (149)
23 2h21_A Ribulose-1,5 bisphospha 98.5 7.9E-08 2.7E-12 95.8 5.1 96 166-277 158-257 (440)
24 2dj8_A Protein CBFA2T1; zinc f 97.7 4.9E-06 1.7E-10 59.0 0.2 43 49-97 14-57 (60)
25 2jw6_A Deformed epidermal auto 97.7 1.1E-05 3.8E-10 55.3 1.8 41 49-95 8-49 (52)
26 2d8q_A BLU protein, zinc finge 97.6 1.8E-05 6.1E-10 57.8 2.2 44 49-98 14-58 (70)
27 3db5_A PR domain zinc finger p 97.6 4.9E-05 1.7E-09 64.3 4.6 44 209-259 98-144 (151)
28 2od1_A Protein CBFA2T1; zinc f 97.6 1.5E-05 5.1E-10 56.4 0.8 43 49-97 12-55 (60)
29 3ep0_A PR domain zinc finger p 97.4 0.00011 3.7E-09 63.2 4.7 43 209-258 102-147 (170)
30 3dal_A PR domain zinc finger p 97.2 0.00025 8.5E-09 62.3 3.9 42 209-257 132-176 (196)
31 1n3j_A A612L, histone H3 lysin 96.9 0.00071 2.4E-08 54.6 3.9 36 5-41 3-38 (119)
32 3ihx_A PR domain zinc finger p 96.8 0.00069 2.4E-08 57.1 3.7 42 209-257 97-141 (152)
33 3f9x_A Histone-lysine N-methyl 96.6 0.0022 7.4E-08 54.7 5.3 38 3-40 27-64 (166)
34 3ray_A PR domain-containing pr 96.6 0.0014 4.9E-08 58.9 4.0 43 209-258 141-186 (237)
35 3ope_A Probable histone-lysine 95.0 0.017 5.9E-07 51.6 4.2 35 6-40 74-108 (222)
36 2w5y_A Histone-lysine N-methyl 94.8 0.024 8.2E-07 49.5 4.5 35 6-40 52-86 (192)
37 3h6l_A Histone-lysine N-methyl 94.7 0.031 1.1E-06 51.7 5.2 38 3-40 114-151 (278)
38 3hna_A Histone-lysine N-methyl 94.4 0.037 1.3E-06 51.5 5.0 38 3-40 144-181 (287)
39 3s8p_A Histone-lysine N-methyl 93.3 0.073 2.5E-06 48.9 4.6 32 3-34 128-164 (273)
40 3bo5_A Histone-lysine N-methyl 93.1 0.082 2.8E-06 49.2 4.7 35 3-37 123-157 (290)
41 1mvh_A Cryptic LOCI regulator 92.6 0.1 3.5E-06 48.7 4.7 37 3-39 134-170 (299)
42 1ml9_A Histone H3 methyltransf 92.1 0.11 3.9E-06 48.5 4.3 35 3-37 130-164 (302)
43 2f69_A Histone-lysine N-methyl 91.1 0.18 6.1E-06 46.1 4.3 36 5-40 108-145 (261)
44 2yqq_A Zinc finger HIT domain- 90.6 0.053 1.8E-06 37.2 0.3 31 49-83 11-41 (56)
45 3rq4_A Histone-lysine N-methyl 90.5 0.18 6.3E-06 45.6 3.8 33 3-35 100-137 (247)
46 1h3i_A Histone H3 lysine 4 spe 90.0 0.25 8.4E-06 45.9 4.3 35 6-40 163-199 (293)
47 2qpw_A PR domain zinc finger p 89.6 0.31 1.1E-05 40.6 4.2 30 4-33 27-58 (149)
48 1x4s_A Protein FON, zinc finge 89.5 0.069 2.3E-06 37.0 0.1 35 49-83 10-44 (59)
49 2r3a_A Histone-lysine N-methyl 88.2 0.44 1.5E-05 44.4 4.7 34 4-37 138-172 (300)
50 2h21_A Ribulose-1,5 bisphospha 86.9 0.43 1.5E-05 46.8 3.9 23 15-37 31-53 (440)
51 1wvo_A Sialic acid synthase; a 84.7 0.42 1.4E-05 35.2 2.0 22 14-35 3-24 (79)
52 3ep0_A PR domain zinc finger p 84.0 0.84 2.9E-05 38.8 3.8 30 5-34 26-57 (170)
53 1pft_A TFIIB, PFTFIIBN; N-term 83.9 0.73 2.5E-05 30.5 2.8 37 332-375 5-42 (50)
54 3db5_A PR domain zinc finger p 80.8 1.2 4E-05 37.1 3.5 29 5-33 22-51 (151)
55 3dal_A PR domain zinc finger p 76.2 1.9 6.4E-05 37.5 3.5 29 5-33 57-87 (196)
56 1dl6_A Transcription factor II 75.8 0.85 2.9E-05 31.4 1.0 41 328-375 7-48 (58)
57 1vq8_Z 50S ribosomal protein L 73.0 1.4 4.6E-05 32.8 1.5 33 331-370 26-58 (83)
58 2yrc_A Protein transport prote 72.7 0.95 3.3E-05 31.3 0.6 35 332-367 9-43 (59)
59 1wff_A Riken cDNA 2810002D23 p 68.4 3.5 0.00012 30.6 2.9 28 49-77 24-51 (85)
60 1wfp_A Zinc finger (AN1-like) 64.6 4.1 0.00014 29.4 2.5 27 49-77 24-50 (74)
61 1z60_A TFIIH basal transcripti 64.2 2.3 8E-05 29.3 1.1 32 50-82 15-46 (59)
62 2a20_A Regulating synaptic mem 60.8 2.1 7.2E-05 29.3 0.4 26 334-366 35-60 (62)
63 1lv3_A Hypothetical protein YA 60.4 2.5 8.4E-05 30.0 0.7 30 51-85 10-40 (68)
64 1wfh_A Zinc finger (AN1-like) 60.0 3.7 0.00013 28.7 1.5 27 49-77 14-40 (64)
65 1wg2_A Zinc finger (AN1-like) 59.2 3.9 0.00013 28.6 1.5 27 49-77 14-40 (64)
66 1x4w_A Hypothetical protein FL 56.7 4.6 0.00016 28.6 1.6 28 49-77 14-43 (67)
67 2con_A RUH-035 protein, NIN on 55.0 4.9 0.00017 29.4 1.6 26 49-74 14-39 (79)
68 3qt1_I DNA-directed RNA polyme 48.7 11 0.00037 30.5 2.8 32 334-368 26-57 (133)
69 3h0g_I DNA-directed RNA polyme 48.7 12 0.0004 29.3 3.0 33 334-369 6-38 (113)
70 1wfl_A Zinc finger protein 216 48.2 5.7 0.00019 28.6 0.9 27 49-77 24-50 (74)
71 3j21_g 50S ribosomal protein L 46.2 7.3 0.00025 25.9 1.2 27 329-366 11-37 (51)
72 1wvo_A Sialic acid synthase; a 44.9 8.5 0.00029 28.0 1.5 17 237-253 8-24 (79)
73 2ct7_A Ring finger protein 31; 42.5 11 0.00037 27.8 1.8 48 53-102 28-78 (86)
74 3g8r_A Probable spore coat pol 42.3 9.4 0.00032 36.1 1.7 22 15-36 277-298 (350)
75 3t7l_A Zinc finger FYVE domain 41.3 9.5 0.00032 28.5 1.3 33 49-82 19-52 (90)
76 2l8e_A Polyhomeotic-like prote 38.1 7.7 0.00026 25.6 0.3 30 50-83 18-47 (49)
77 1qxf_A GR2, 30S ribosomal prot 36.4 12 0.00041 26.2 1.1 32 329-368 4-37 (66)
78 2wqp_A Polysialic acid capsule 35.3 14 0.00046 35.0 1.6 21 16-36 289-309 (349)
79 1vli_A Spore coat polysacchari 34.8 14 0.00049 35.3 1.7 21 16-36 314-334 (385)
80 3na7_A HP0958; flagellar bioge 34.1 15 0.00053 32.9 1.7 28 49-76 197-234 (256)
81 1wys_A Riken cDNA 2310008M20 p 32.9 22 0.00076 25.6 2.1 27 49-77 13-41 (75)
82 3ihx_A PR domain zinc finger p 32.5 18 0.00061 29.8 1.7 23 7-32 24-46 (152)
83 1z2q_A LM5-1; membrane protein 32.5 20 0.00068 26.2 1.8 32 49-81 20-52 (84)
84 3ooi_A Histone-lysine N-methyl 31.8 19 0.00066 31.7 1.9 20 18-37 190-209 (232)
85 3j20_W 30S ribosomal protein S 31.6 17 0.00057 25.3 1.1 34 328-368 11-45 (63)
86 1joc_A EEA1, early endosomal a 29.7 29 0.00099 27.5 2.5 32 49-81 68-100 (125)
87 3jyw_9 60S ribosomal protein L 28.6 37 0.0013 24.2 2.6 35 330-372 24-59 (72)
88 1m2o_A SEC23, protein transpor 28.5 21 0.00072 37.4 1.9 36 332-368 53-88 (768)
89 3h0g_L DNA-directed RNA polyme 28.3 27 0.00094 24.2 1.8 31 330-368 19-49 (63)
90 1twf_L ABC10-alpha, DNA-direct 28.2 30 0.001 24.5 2.0 25 49-73 27-53 (70)
91 1x4v_A Hypothetical protein LO 28.0 32 0.0011 23.9 2.1 27 49-77 11-39 (63)
92 2yw8_A RUN and FYVE domain-con 27.1 36 0.0012 24.7 2.4 33 49-82 18-51 (82)
93 1twf_I B12.6, DNA-directed RNA 26.9 14 0.00048 29.3 0.1 33 333-368 5-37 (122)
94 2nut_A Protein transport prote 26.7 22 0.00074 37.4 1.5 35 332-367 62-96 (769)
95 1x4u_A Zinc finger, FYVE domai 26.0 37 0.0013 24.7 2.3 32 49-81 13-45 (84)
96 2xzm_6 RPS27E; ribosome, trans 24.5 27 0.00091 25.5 1.2 33 328-368 28-62 (81)
97 4ayb_P DNA-directed RNA polyme 23.4 47 0.0016 21.6 2.1 24 51-74 4-32 (48)
98 3ray_A PR domain-containing pr 23.3 62 0.0021 28.7 3.7 28 6-33 72-100 (237)
99 3cc2_Z 50S ribosomal protein L 23.1 44 0.0015 26.1 2.3 34 329-370 57-91 (116)
100 1pcx_A Protein transport prote 22.5 26 0.00089 37.0 1.2 32 333-367 113-144 (810)
101 3j21_i 50S ribosomal protein L 22.1 23 0.0008 26.0 0.5 34 330-371 33-67 (83)
102 1e4u_A Transcriptional repress 21.7 28 0.00097 24.9 0.9 35 49-85 10-46 (78)
103 3k3s_A Altronate hydrolase; st 21.6 46 0.0016 25.6 2.1 19 20-38 64-83 (105)
104 3j20_Y 30S ribosomal protein S 21.6 60 0.002 21.2 2.4 26 333-367 20-47 (50)
105 3iz6_X 40S ribosomal protein S 21.3 31 0.0011 25.4 1.1 35 328-369 32-67 (86)
106 6rxn_A Rubredoxin; electron tr 21.3 41 0.0014 21.7 1.5 32 331-366 3-39 (46)
107 1m2v_B SEC24, protein transpor 21.1 30 0.001 37.2 1.3 32 333-367 229-260 (926)
108 1ffk_W Ribosomal protein L37AE 20.4 34 0.0012 24.5 1.1 34 330-371 25-59 (73)
No 1
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=100.00 E-value=2.2e-49 Score=401.77 Aligned_cols=265 Identities=21% Similarity=0.385 Sum_probs=210.6
Q ss_pred CC-CCCCceEEEEeCCCccEEEEcccCCCCcEEEEcCcceeccccccccCcccccccccccCCCCCccCCCCCCC-cCcc
Q 046120 1 MS-AVSETVTVAEIEGRGRGLVSTQSLKAGQIVLRDSPILLYSALPFINSSSFCHNCFRKTMHSSSSICPSCSVA-FCSP 78 (381)
Q Consensus 1 ~~-~~s~~i~v~~~~~~GRglvAtrdi~~GevIl~e~P~v~~p~~~l~~~~~~C~~C~~~~~~~~~~~C~~C~~~-yCS~ 78 (381)
|| +..++|+|..++++||||||+|+|++||+||.|+|++.++.. .....+|.+|++... .+.+|++|+++ |||+
T Consensus 1 ~~~~~~~~v~v~~~~~~GR~lvAtr~i~~Ge~Il~e~P~~~v~~~--~~~~~~C~~C~~~~~--~~~~C~~C~~~~yCs~ 76 (490)
T 3n71_A 1 MTIGSMENVEVFTSEGKGRGLKATKEFWAADVIFAERAYSAVVFD--SLINFVCHTCFKRQE--KLHRCGQCKFAHYCDR 76 (490)
T ss_dssp CCTTCCTTEEEEECSSSCEEEEESSCBCTTCEEEEECCSEEEECG--GGTTTBCTTTCCBCS--CCEECTTTSCCEESSH
T ss_pred CCCCCCCceEEEecCCCCceEEeccCCCCCCEEEecCCceEEecc--cccCCcCCCCCCCCC--CCCCCCCCCCcCcCCH
Confidence 44 556999999999999999999999999999999999866554 347899999999654 68899999999 9999
Q ss_pred ccchhhhhcCCchhhhHhHHHhhhcCCCCCCCCChhHHHHHHHHHHHhhhc-cCCchhHHHHHHhcCCCCCCchhHH---
Q 046120 79 KCSTAAASSSHSPYVCQALTRLLNLNSPDAANLPLDRQLQARFLIAAYNLA-VVNPSQFQILLAFQGTVTDNDTSAA--- 154 (381)
Q Consensus 79 ~C~~~a~~~~H~~~EC~~l~~~~~~~~~~~~~~~~~~~~~~R~l~~~~~l~-~~~~~~~~~l~~L~~~~~~~~~~~~--- 154 (381)
+||+.+|. .| +.||..++.+. . .++...++++|+|++..... ..++..|..|.+|++|.++......
T Consensus 77 ~Cq~~~w~-~H-k~eC~~~~~~~-~------~p~~~~rl~lRiL~~~~~~~~~~~~~~~~~~~~L~sh~~~~~~~~~~~~ 147 (490)
T 3n71_A 77 TCQKDAWL-NH-KNECAAIKKYG-K------VPNENIRLAARIMWRVEREGTGLTEGCLVSVDDLQNHVEHFGEEEQKEL 147 (490)
T ss_dssp HHHHHHHH-HH-HHHHHHHHHHT-S------CCCHHHHHHHHHHHHHHHTTSSBCTTCSSBGGGSCCCGGGCCHHHHHHH
T ss_pred HHhhhhhh-HH-HHHhHHHHhcC-c------CCCHHHHHHHHHHHHhhccCccCcchhhhHHHHHHhhhhhcCchHHHHH
Confidence 99999995 67 99999998872 1 24566788999887643222 1223446678899999876654321
Q ss_pred ----HHHHhhCCCC-CCCCHHHHHHHHHHhhccccccccCCcCCCCCCccceeEEeccccccccCCCCCCceeeeccccc
Q 046120 155 ----HYLSSLCPPP-ASTTIELTAALLAKDRLNAFGLMEPYIEGQDGRRSVRAYGIYLKASFFNHDCLPNACRFDYVDAA 229 (381)
Q Consensus 155 ----~~l~~l~~~~-~~~~~~~i~~ll~~l~~Nsf~i~~~~~~~~~~~~~~~g~gLyp~~Sl~NHSC~PN~~~~~~~d~~ 229 (381)
.-+..+++.. ..++.++|..+++++.+|+|+|.... ....+|.||||.+|+|||||.||+.++ |.+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~N~f~i~~~~------g~~~~g~gl~p~~s~~NHSC~PN~~~~-~~~~~ 220 (490)
T 3n71_A 148 RVDVDTFLQYWPPQSQQFSMQYISHIFGVINCNGFTLSDQR------GLQAVGVGIFPNLGLVNHDCWPNCTVI-FNNGN 220 (490)
T ss_dssp HHHHHHHHHHSCTTSCCCCHHHHHHHHHHHHTTEEEEECTT------SCSEEEEEECTTGGGCEECSSCSEEEE-EECCC
T ss_pred HHHHHHHHHHccccccCCCHHHHHHHHHHHhccCcccccCC------CCccceEEEchhhhhcccCCCCCeeEE-ecCCc
Confidence 1123344432 46789999999999999999998531 134689999999999999999999853 42210
Q ss_pred c-------CCCceEEEEEccCCCCCCeeEEeecCCCCCHHHHHHHHhcCCCeeeeCccccCcc
Q 046120 230 A-------ENNTDIIVRMIHDVPQGREICLSYFPVNYDYSTRQKRLLYDYDFACDCDRCKVEA 285 (381)
Q Consensus 230 ~-------~~~~~l~vrA~r~I~~GeEl~isY~~~~~~~~~Rr~~L~~~y~F~C~C~rC~~~~ 285 (381)
. +....++|+|+|||++||||||||++..+++.+||+.|++.|+|.|.|++|.++.
T Consensus 221 ~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~ 283 (490)
T 3n71_A 221 HEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSCEHCQKGL 283 (490)
T ss_dssp CSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSCSCHHHHHHHHHHHHSSCCCCHHHHHTT
T ss_pred cccccccccccceEEEEECCCCCCCCEEEEeecCCCCCHHHHHHHHHCCCCeEeeCCCCCCCC
Confidence 0 0012899999999999999999999999999999999999999999999999876
No 2
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=100.00 E-value=2.3e-49 Score=395.84 Aligned_cols=255 Identities=22% Similarity=0.373 Sum_probs=206.2
Q ss_pred CceEEEEeCCCccEEEEcccCCCCcEEEEcCcceeccccccccCcccccccccccCCCCCccCCCCCCC-cCccccchhh
Q 046120 6 ETVTVAEIEGRGRGLVSTQSLKAGQIVLRDSPILLYSALPFINSSSFCHNCFRKTMHSSSSICPSCSVA-FCSPKCSTAA 84 (381)
Q Consensus 6 ~~i~v~~~~~~GRglvAtrdi~~GevIl~e~P~v~~p~~~l~~~~~~C~~C~~~~~~~~~~~C~~C~~~-yCS~~C~~~a 84 (381)
++|++..+|++||||||+|+|++||+||+|+|++.++.. .....+|.+|++... .+.+|++|+++ |||++||+++
T Consensus 7 ~~ve~~~~~~~GRgl~A~r~i~~Ge~Il~e~P~a~~~~~--~~~~~~C~~C~~~~~--~~~~C~~C~~~~yCs~~Cq~~~ 82 (433)
T 3qww_A 7 GGLERFCSAGKGRGLRALRPFHVGDLLFSCPAYACVLTV--GERGHHCECCFARKE--GLSKCGRCKQAFYCDVECQKED 82 (433)
T ss_dssp TTEEEEECTTSCEEEEESSCBCTTCEEEEEECSEEEECG--GGTTTBCTTTCCBCS--SCEECTTTSCCEESSHHHHHHH
T ss_pred CcEEEeecCCCcCeEEECCCCCCCCEEEecCCceEEecc--cccCCcCCcccccCC--CCCCCCCCcceeecChhhhhhh
Confidence 899999999999999999999999999999999987765 347899999999754 68899999999 9999999999
Q ss_pred hhcCCchhhhHhHHHhhhcCCCCCCCCChhHHHHHHHHHHHhhhccCCc-hhHHHHHHhcCCCCCCchhH-------HHH
Q 046120 85 ASSSHSPYVCQALTRLLNLNSPDAANLPLDRQLQARFLIAAYNLAVVNP-SQFQILLAFQGTVTDNDTSA-------AHY 156 (381)
Q Consensus 85 ~~~~H~~~EC~~l~~~~~~~~~~~~~~~~~~~~~~R~l~~~~~l~~~~~-~~~~~l~~L~~~~~~~~~~~-------~~~ 156 (381)
| ..| +.||..++.+... ..++...++++|+|++........+ ..+..|..|++|.++..... ...
T Consensus 83 w-~~H-k~eC~~l~~~~~~-----~~p~~~~rl~~Ril~~~~~~~~~~~~~~~~~~~~L~sh~~~~~~~~~~~~~~~~~~ 155 (433)
T 3qww_A 83 W-PLH-KLECSSMVVLGEN-----WNPSETVRLTARILAKQKIHPERTPSEKLLAVREFESHLDKLDNEKKDLIQSDIAA 155 (433)
T ss_dssp H-HHH-TTTHHHHHHSSTT-----CCCCHHHHHHHHHHHHHHHCCSCCGGGSSCCGGGCCCCGGGCCHHHHHHHHHHHHH
T ss_pred h-hHH-HHHHHHHHHhCcc-----CCCcHHHHHHHHHHHHhhhccccCchhhhhhHHHHHhhhhccChHHHHHHHHHHHH
Confidence 9 577 9999999886211 1235567889998876422112122 33456778999987654321 111
Q ss_pred HHhhCCCC-CCCCHHHHHHHHHHhhccccccccCCcCCCCCCccceeEEeccccccccCCCCCCceeeeccccccCCCce
Q 046120 157 LSSLCPPP-ASTTIELTAALLAKDRLNAFGLMEPYIEGQDGRRSVRAYGIYLKASFFNHDCLPNACRFDYVDAAAENNTD 235 (381)
Q Consensus 157 l~~l~~~~-~~~~~~~i~~ll~~l~~Nsf~i~~~~~~~~~~~~~~~g~gLyp~~Sl~NHSC~PN~~~~~~~d~~~~~~~~ 235 (381)
+..+++.. ...+.++|..+++++.+|+|+|... ....+|.||||.+|+|||||.||+.+. | .+..
T Consensus 156 l~~~~~~~~~~~~~~~i~~~~~~~~~N~f~i~~~-------~~~~~g~gl~p~~s~~NHsC~PN~~~~-~------~~~~ 221 (433)
T 3qww_A 156 LHQFYSKYLEFPDHSSLVVLFAQVNCNGFTIEDE-------ELSHLGSAIFPDVALMNHSCCPNVIVT-Y------KGTL 221 (433)
T ss_dssp HHHHHTTTCCCCCHHHHHHHHHHHHHHCEEEECT-------TCCEEEEEECTTGGGSEECSSCSEEEE-E------ETTE
T ss_pred HHHHHhcccCCCCHHHHHHHHHHHcCCceecccC-------CccceeEEecccccccCCCCCCCceEE-E------cCCE
Confidence 33333322 2347899999999999999999753 345689999999999999999999753 4 2578
Q ss_pred EEEEEccCCCCCCeeEEeecCCCCCHHHHHHHHhcCCCeeeeCccccCcc
Q 046120 236 IIVRMIHDVPQGREICLSYFPVNYDYSTRQKRLLYDYDFACDCDRCKVEA 285 (381)
Q Consensus 236 l~vrA~r~I~~GeEl~isY~~~~~~~~~Rr~~L~~~y~F~C~C~rC~~~~ 285 (381)
++|+|+|||++||||||||++..+++.+||+.|++.|+|.|.|.||.++.
T Consensus 222 ~~~~a~r~I~~Geel~i~Y~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~ 271 (433)
T 3qww_A 222 AEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCECRECTTKD 271 (433)
T ss_dssp EEEEESSCBCTTCEEEECCSCTTSCHHHHHHHHHHHHSCCCCSHHHHHCT
T ss_pred EEEEeccCcCCCCEEEEeecCCcCCHHHHHHHHhCcCCEEeECCCCCCCC
Confidence 99999999999999999999999999999999999999999999999875
No 3
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=100.00 E-value=1.5e-48 Score=390.22 Aligned_cols=254 Identities=22% Similarity=0.406 Sum_probs=205.0
Q ss_pred CceEEEEeCCCccEEEEcccCCCCcEEEEcCcceeccccccccCcccccccccccCCCCCccCCCCCCC-cCccccchhh
Q 046120 6 ETVTVAEIEGRGRGLVSTQSLKAGQIVLRDSPILLYSALPFINSSSFCHNCFRKTMHSSSSICPSCSVA-FCSPKCSTAA 84 (381)
Q Consensus 6 ~~i~v~~~~~~GRglvAtrdi~~GevIl~e~P~v~~p~~~l~~~~~~C~~C~~~~~~~~~~~C~~C~~~-yCS~~C~~~a 84 (381)
..|++..++++||||||+|+|++||+|+.|.|++.++.. .....+|.+|+++.. ...+|++|+++ |||++||+++
T Consensus 5 ~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~e~P~~~~~~~--~~~~~~C~~C~~~~~--~~~~C~~C~~~~yCs~~Cq~~~ 80 (429)
T 3qwp_A 5 LKVEKFATANRGNGLRAVTPLRPGELLFRSDPLAYTVCK--GSRGVVCDRCLLGKE--KLMRCSQCRVAKYCSAKCQKKA 80 (429)
T ss_dssp CSEEEEECSSSSEEEEESSCBCTTCEEEEECCSEEEECG--GGBTTBCTTTCCBCS--SCEECTTTSCCEESSHHHHHHT
T ss_pred cceeecccCCCCCeEEeCCCCCCCCEEEecCCceeeecc--ccCCCcCcCCCCcCC--CCCcCCCCCCcccCChhhhhhh
Confidence 578888899999999999999999999999999988875 347899999999754 67899999998 9999999999
Q ss_pred hhcCCchhhhHhHHHhhhcCCCCCCCCChhHHHHHHHHHHHhhhccCCchhHHHHHHhcCCCCCCchhH-------HHHH
Q 046120 85 ASSSHSPYVCQALTRLLNLNSPDAANLPLDRQLQARFLIAAYNLAVVNPSQFQILLAFQGTVTDNDTSA-------AHYL 157 (381)
Q Consensus 85 ~~~~H~~~EC~~l~~~~~~~~~~~~~~~~~~~~~~R~l~~~~~l~~~~~~~~~~l~~L~~~~~~~~~~~-------~~~l 157 (381)
|. .| +.||..++.+.+ . ..+...++++|++++........++.|..+.+|++|.++..... +..+
T Consensus 81 w~-~H-k~eC~~~~~~~~----~--~~~~~~rl~~rill~~~~~~~~~~~~~~~~~~L~sh~~~~~~~~~~~~~~~~~~~ 152 (429)
T 3qwp_A 81 WP-DH-KRECKCLKSCKP----R--YPPDSVRLLGRVVFKLMDGAPSESEKLYSFYDLESNINKLTEDRKEGLRQLVMTF 152 (429)
T ss_dssp HH-HH-HHHHHHHHHTTT----C--CCCHHHHHHHHHHHHHHHSCCCGGGSSSCGGGCCCCGGGCCHHHHHHHHHHHHHH
T ss_pred hh-hh-HHhhhhHHhcCc----c--CCChHHHHHHHHHHHHhcCCCCchhhhhhHHHHhhChhhcChhHHHHHHHHHHHH
Confidence 95 67 999999988621 1 23456788889888754321122244667889999987654322 1223
Q ss_pred HhhCCCC-----CCCCHHHHHHHHHHhhccccccccCCcCCCCCCccceeEEeccccccccCCCCCCceeeeccccccCC
Q 046120 158 SSLCPPP-----ASTTIELTAALLAKDRLNAFGLMEPYIEGQDGRRSVRAYGIYLKASFFNHDCLPNACRFDYVDAAAEN 232 (381)
Q Consensus 158 ~~l~~~~-----~~~~~~~i~~ll~~l~~Nsf~i~~~~~~~~~~~~~~~g~gLyp~~Sl~NHSC~PN~~~~~~~d~~~~~ 232 (381)
..+++.. ...+.+++..+++++.+|+|+|... .....|.||||.+|+|||||.||+.++ | .
T Consensus 153 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~N~f~i~~~-------~~~~~g~~l~~~~s~~NHsC~PN~~~~-~------~ 218 (429)
T 3qwp_A 153 QHFMREEIQDASQLPPAFDLFEAFAKVICNSFTICNA-------EMQEVGVGLYPSISLLNHSCDPNCSIV-F------N 218 (429)
T ss_dssp HHHTTTTCCSGGGSCTTCCHHHHHHHHHHHCEEEECT-------TSCEEEEEECTTGGGCEECSSCSEEEE-E------E
T ss_pred HHHHhhhcCccccCCCHHHHHHHHHHHHhcCcccccc-------ccccceEEEchhhHhhCcCCCCCeEEE-E------e
Confidence 4444321 1234457889999999999999753 345689999999999999999999753 4 2
Q ss_pred CceEEEEEccCCCCCCeeEEeecCCCCCHHHHHHHHhcCCCeeeeCccccCcc
Q 046120 233 NTDIIVRMIHDVPQGREICLSYFPVNYDYSTRQKRLLYDYDFACDCDRCKVEA 285 (381)
Q Consensus 233 ~~~l~vrA~r~I~~GeEl~isY~~~~~~~~~Rr~~L~~~y~F~C~C~rC~~~~ 285 (381)
+..++|+|+|||++||||||||++..+++.+||+.|++.|+|.|.|++|.++.
T Consensus 219 ~~~~~~~a~r~I~~GeEl~isY~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~ 271 (429)
T 3qwp_A 219 GPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFECDCFRCQTQD 271 (429)
T ss_dssp TTEEEEEECSCBCTTCEEEECCSCSSCCHHHHHHHHHHHHCCCCCSHHHHHTT
T ss_pred CCEEEEEEeeeECCCCEEEEEecCCCCCHHHHHHHHhccCCeEeeCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999865
No 4
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.57 E-value=5.2e-16 Score=142.13 Aligned_cols=82 Identities=26% Similarity=0.510 Sum_probs=65.4
Q ss_pred hccccccccCCcCCCCCCccceeEEeccc-cccccCCCCCCceeeeccccccCCCceEEEEEccCCCCCCeeEEeecCCC
Q 046120 180 RLNAFGLMEPYIEGQDGRRSVRAYGIYLK-ASFFNHDCLPNACRFDYVDAAAENNTDIIVRMIHDVPQGREICLSYFPVN 258 (381)
Q Consensus 180 ~~Nsf~i~~~~~~~~~~~~~~~g~gLyp~-~Sl~NHSC~PN~~~~~~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~ 258 (381)
..|.|.+..+ ......++|+. ++++||||.||+....+ .+..+.|+|+|||++|||||++|++..
T Consensus 155 ~~n~f~i~~~--------~~~~~~~l~~~~ar~iNHSC~PN~~~~~~------~~~~i~v~A~rdI~~GEElt~~Y~~~~ 220 (247)
T 3rq4_A 155 GENDFSIMYS--------TRKRSAQLWLGPAAFINHDCKPNCKFVPA------DGNAACVKVLRDIEPGDEVTCFYGEGF 220 (247)
T ss_dssp TTSCTTEEEE--------TTTTEEEEEESGGGGCEECSSCSEEEEEE------TTTEEEEEESSCBCTTCBCEECCCTTS
T ss_pred cCCcEEEEec--------CCcccceeecchhhhcCCCCCCCEEEEEe------CCCEEEEEECCcCCCCCEEEEecCchh
Confidence 4677777542 12246789987 89999999999964322 357899999999999999999999997
Q ss_pred CCHHHHHHHHhcCCCeeeeCccccCcc
Q 046120 259 YDYSTRQKRLLYDYDFACDCDRCKVEA 285 (381)
Q Consensus 259 ~~~~~Rr~~L~~~y~F~C~C~rC~~~~ 285 (381)
|+ .++|.|.|.+|..+.
T Consensus 221 ~~----------~~~f~C~C~~C~~~~ 237 (247)
T 3rq4_A 221 FG----------EKNEHCECHTCERKG 237 (247)
T ss_dssp SS----------GGGTTCCCHHHHHHT
T ss_pred cC----------CCCCEEECCCCCCCC
Confidence 75 378999999998754
No 5
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.38 E-value=1.4e-13 Score=127.26 Aligned_cols=83 Identities=27% Similarity=0.367 Sum_probs=60.7
Q ss_pred hhccccccccCCcCCCCCCccceeEEeccccccccCCCCCCceeeeccccccCCCceEEEEEccCCCCCCeeEEeecCCC
Q 046120 179 DRLNAFGLMEPYIEGQDGRRSVRAYGIYLKASFFNHDCLPNACRFDYVDAAAENNTDIIVRMIHDVPQGREICLSYFPVN 258 (381)
Q Consensus 179 l~~Nsf~i~~~~~~~~~~~~~~~g~gLyp~~Sl~NHSC~PN~~~~~~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~ 258 (381)
...|.|.|.... ....+.-....++++||||.||+..+ +. +...|.|+|+|||++|||||++|++..
T Consensus 183 ~~~~dF~i~~s~-------~~~~a~~~g~~arfiNHSC~PN~~~~-~~-----~~~~i~i~A~RdI~~GEELt~~Y~~~~ 249 (273)
T 3s8p_A 183 HGENDFSVMYST-------RKNCAQLWLGPAAFINHDCRPNCKFV-ST-----GRDTACVKALRDIEPGEEISCYYGDGF 249 (273)
T ss_dssp TTTSCTTEEEET-------TTTEEEEEESGGGGCEECSSCSEEEE-EE-----ETTEEEEEESSCBCTTCBCEECCCTTT
T ss_pred hcccccceeccc-------cccccceecchHHhhCCCCCCCeEEE-Ec-----CCCEEEEEECceeCCCCEEEEecCchh
Confidence 456777765421 11122233445799999999999743 32 245899999999999999999999987
Q ss_pred CCHHHHHHHHhcCCCeeeeCccccCc
Q 046120 259 YDYSTRQKRLLYDYDFACDCDRCKVE 284 (381)
Q Consensus 259 ~~~~~Rr~~L~~~y~F~C~C~rC~~~ 284 (381)
|+. ++|.|.|.+|.-.
T Consensus 250 ~~~----------~~f~C~C~~c~cr 265 (273)
T 3s8p_A 250 FGE----------NNEFCECYTCERR 265 (273)
T ss_dssp TSG----------GGTTCCCHHHHHH
T ss_pred cCC----------CCeEEECCCCcCC
Confidence 763 6799999999753
No 6
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=99.33 E-value=7.3e-12 Score=126.57 Aligned_cols=94 Identities=13% Similarity=0.051 Sum_probs=75.2
Q ss_pred CCCCHHHHHHHHHHhhccccccccCCcCCCCCCccceeEEeccccccccCCCCCCceeeeccccccCCCceEEEEEccCC
Q 046120 165 ASTTIELTAALLAKDRLNAFGLMEPYIEGQDGRRSVRAYGIYLKASFFNHDCLPNACRFDYVDAAAENNTDIIVRMIHDV 244 (381)
Q Consensus 165 ~~~~~~~i~~ll~~l~~Nsf~i~~~~~~~~~~~~~~~g~gLyp~~Sl~NHSC~PN~~~~~~~d~~~~~~~~l~vrA~r~I 244 (381)
..++.+.+...++.+..++|.+... .....+.+|+|.+.|+||||.||...+.+ .+..+.++|.++|
T Consensus 236 ~~~t~e~f~wA~~~v~SRa~~~~~~-------~g~~~~~~LvP~~Dm~NH~~~~~~~~~~~------~~~~~~~~a~~~i 302 (497)
T 3smt_A 236 DSFTYEDYRWAVSSVMTRQNQIPTE-------DGSRVTLALIPLWDMCNHTNGLITTGYNL------EDDRCECVALQDF 302 (497)
T ss_dssp TCCCHHHHHHHHHHHHHHCEEEECT-------TSSSEEEEECTTGGGCEECSCSEEEEEET------TTTEEEEEESSCB
T ss_pred cccCHHHHHHhhheEecccccccCc-------ccccccceeechHHhhcCCCcccceeeec------cCCeEEEEeCCcc
Confidence 3578899999999999999987532 12235679999999999999997654433 3567899999999
Q ss_pred CCCCeeEEeecCCCCCHHHHHHHHhcCCCeeee
Q 046120 245 PQGREICLSYFPVNYDYSTRQKRLLYDYDFACD 277 (381)
Q Consensus 245 ~~GeEl~isY~~~~~~~~~Rr~~L~~~y~F~C~ 277 (381)
++||||+|||++.. ...|...|||.+.
T Consensus 303 ~~Geei~isYG~~~------n~~Ll~~YGFv~~ 329 (497)
T 3smt_A 303 RAGEQIYIFYGTRS------NAEFVIHSGFFFD 329 (497)
T ss_dssp CTTCEEEECCCSCC------HHHHHHHHSCCCT
T ss_pred CCCCEEEEeCCCCC------hHHHHHHCCCCCC
Confidence 99999999999862 2467778999964
No 7
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=99.32 E-value=5.7e-12 Score=115.05 Aligned_cols=59 Identities=24% Similarity=0.442 Sum_probs=45.8
Q ss_pred ccccccCCCCCCceeeeccccccCCCceEEEEEccCCCCCCeeEEeecCCCCCHHHHHHHHhcCCCeeeeCc
Q 046120 208 KASFFNHDCLPNACRFDYVDAAAENNTDIIVRMIHDVPQGREICLSYFPVNYDYSTRQKRLLYDYDFACDCD 279 (381)
Q Consensus 208 ~~Sl~NHSC~PN~~~~~~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~~~~~~Rr~~L~~~y~F~C~C~ 279 (381)
.+.++||||.||+....+.. .+..+|.|+|+|+|++|||||++|....++ ...|.|.|-
T Consensus 165 ~aRfiNHSC~PN~~~~~~~~---~~~~~i~~~A~RdI~~GEELT~dY~~~~~~----------~~~~~C~CG 223 (232)
T 3ooi_A 165 YARFMNHCCQPNCETQKWSV---NGDTRVGLFALSDIKAGTELTFNYNLECLG----------NGKTVCKCG 223 (232)
T ss_dssp GGGGCEECSSCSEEEEEEEE---TTEEEEEEEESSCBCTTCBCEECCTTCSTT----------CTTCBCCCC
T ss_pred ccccccccCCCCeEEEEEEE---CCceEEEEEECCccCCCCEEEEECCCCcCC----------CCCcEeECC
Confidence 46789999999987422211 134689999999999999999999987654 246999994
No 8
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.28 E-value=1.3e-12 Score=106.95 Aligned_cols=55 Identities=22% Similarity=0.153 Sum_probs=46.5
Q ss_pred eEEeccccccccCCCCCCceeeeccccccCCCceEEEEEccCCCCCCeeEEeecCCCCCH
Q 046120 202 AYGIYLKASFFNHDCLPNACRFDYVDAAAENNTDIIVRMIHDVPQGREICLSYFPVNYDY 261 (381)
Q Consensus 202 g~gLyp~~Sl~NHSC~PN~~~~~~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~~~~ 261 (381)
+..+++.++++||||.||+... +.. +..++.++|+|+|++|||||++|++..|..
T Consensus 58 ~~~~~~~~~~~NHsc~pN~~~~-~~~----~~~~~~~~A~rdI~~GeElt~~Y~~~~~~~ 112 (119)
T 1n3j_A 58 SAMALGFGAIFNHSKDPNARHE-LTA----GLKRMRIFTIKPIAIGEEITISYGDDYWLS 112 (119)
T ss_dssp EEEESSSHHHHHSCSSCCCEEE-ECS----SSSCEEEEECSCBCSSEEECCCCCCCCCCC
T ss_pred cccccCceeeeccCCCCCeeEE-EEC----CCeEEEEEEccccCCCCEEEEecCchhhcC
Confidence 4578899999999999999753 311 356899999999999999999999998875
No 9
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=99.22 E-value=1.3e-10 Score=116.25 Aligned_cols=96 Identities=21% Similarity=0.199 Sum_probs=72.3
Q ss_pred CCCHHHHHHHHHHhhccccccccCCcCCCCCCccceeEEeccccccccCCCCCCceeeeccccccCCCceEEEEEccCCC
Q 046120 166 STTIELTAALLAKDRLNAFGLMEPYIEGQDGRRSVRAYGIYLKASFFNHDCLPNACRFDYVDAAAENNTDIIVRMIHDVP 245 (381)
Q Consensus 166 ~~~~~~i~~ll~~l~~Nsf~i~~~~~~~~~~~~~~~g~gLyp~~Sl~NHSC~PN~~~~~~~d~~~~~~~~l~vrA~r~I~ 245 (381)
.++.+.+....+.+..-+|.+...... ......+.+|.|.+.|+||||.||+.. .| .+..++++|.++|+
T Consensus 183 ~~t~e~f~wA~~~v~SRsf~~~~~~~~---~~~~~~~~~LvP~~D~~NH~~~~~~~~-~~------~~~~~~~~a~~~i~ 252 (449)
T 3qxy_A 183 VRSLELYHQLVALVMAYSFQEPLEEEE---DEKEPNSPVMVPAADILNHLANHNANL-EY------SANCLRMVATQPIP 252 (449)
T ss_dssp GCCHHHHHHHHHHHHHHCBCCCCC--------CCCCCCBBCTTGGGCEECSSCSEEE-EE------CSSEEEEEESSCBC
T ss_pred cCcHHHHHHHHHHHHHHhcccccCccc---ccccCCceeEeecHHHhcCCCCCCeEE-EE------eCCeEEEEECCCcC
Confidence 467888888888888888876432110 011235679999999999999999864 34 24689999999999
Q ss_pred CCCeeEEeecCCCCCHHHHHHHHhcCCCeeee
Q 046120 246 QGREICLSYFPVNYDYSTRQKRLLYDYDFACD 277 (381)
Q Consensus 246 ~GeEl~isY~~~~~~~~~Rr~~L~~~y~F~C~ 277 (381)
+||||+|+|++.. ...|...|||...
T Consensus 253 ~Geei~~~YG~~~------n~~ll~~YGF~~~ 278 (449)
T 3qxy_A 253 KGHEIFNTYGQMA------NWQLIHMYGFVEP 278 (449)
T ss_dssp TTCEEEECCSSCC------HHHHHHHHSCCCC
T ss_pred CCchhhccCCCCC------HHHHHHhCCCCCC
Confidence 9999999999943 2457778999874
No 10
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=99.19 E-value=9.1e-12 Score=110.22 Aligned_cols=63 Identities=25% Similarity=0.558 Sum_probs=45.3
Q ss_pred ccccccCCCCCCceeee-ccccccCCCceEEEEEccCCCCCCeeEEeecCCCCCHHHHHHHHhcCCCeeeeC--ccccC
Q 046120 208 KASFFNHDCLPNACRFD-YVDAAAENNTDIIVRMIHDVPQGREICLSYFPVNYDYSTRQKRLLYDYDFACDC--DRCKV 283 (381)
Q Consensus 208 ~~Sl~NHSC~PN~~~~~-~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~~~~~~Rr~~L~~~y~F~C~C--~rC~~ 283 (381)
.++++||||.||+.... .++ +..+|.|+|+|+|++|||||++|....+.. .+.|.|.| +.|..
T Consensus 124 ~arfiNHSC~PN~~~~~~~~~----g~~~i~i~A~rdI~~GEELt~dY~~~~~~~---------~~~~~C~Cgs~~Crg 189 (192)
T 2w5y_A 124 AARFINHSCEPNCYSRVINID----GQKHIVIFAMRKIYRGEELTYDYKFPIEDA---------SNKLPCNCGAKKCRK 189 (192)
T ss_dssp GGGGCEECSSCSEEEEEEEET----TEEEEEEEESSCBCTTCEEEECCCC----------------CCBCCCCCTTCCS
T ss_pred hhHhhccCCCCCEEEEEEEEC----CcEEEEEEECcccCCCCEEEEEcCCchhcC---------CCCceeECCCCCCcC
Confidence 46889999999997422 121 235899999999999999999999987653 37899999 57763
No 11
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.08 E-value=3.2e-11 Score=104.39 Aligned_cols=58 Identities=16% Similarity=0.095 Sum_probs=45.7
Q ss_pred cccccCCCCCCceeeeccccccCCCceEEEEEccCCCCCCeeEEeecCCCCCHHHHHHHHh
Q 046120 209 ASFFNHDCLPNACRFDYVDAAAENNTDIIVRMIHDVPQGREICLSYFPVNYDYSTRQKRLL 269 (381)
Q Consensus 209 ~Sl~NHSC~PN~~~~~~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~~~~~~Rr~~L~ 269 (381)
+.++||||.||+....+.. .+..++.++|+|||++|||||++|.+.......|+.+|+
T Consensus 108 aRfiNHSC~PN~~~~~~~~---~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~L~ 165 (166)
T 3f9x_A 108 GRLINHSKCGNCQTKLHDI---DGVPHLILIASRDIAAGEELLFDYGDRSKASIEAHPWLK 165 (166)
T ss_dssp GGGCEECTTCSEEEEEEEE---TTEEEEEEEESSCBCTTCBCEECCCCCCHHHHHHCGGGG
T ss_pred hheeecCCCCCeeEEEEEE---CCeeEEEEEECCcCCCCCEEEEEcCCChhhHhhhCchhc
Confidence 5789999999986322211 134689999999999999999999999877777777665
No 12
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=99.00 E-value=1.4e-10 Score=105.07 Aligned_cols=64 Identities=25% Similarity=0.496 Sum_probs=48.4
Q ss_pred ccccccCCCCCCceeeeccccccCCCceEEEEEccCCCCCCeeEEeecCCCCCHHHHHHHHhcCCCeeeeCcc--ccC
Q 046120 208 KASFFNHDCLPNACRFDYVDAAAENNTDIIVRMIHDVPQGREICLSYFPVNYDYSTRQKRLLYDYDFACDCDR--CKV 283 (381)
Q Consensus 208 ~~Sl~NHSC~PN~~~~~~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~~~~~~Rr~~L~~~y~F~C~C~r--C~~ 283 (381)
.+.++||||.||+....+.. .+..+|.|+|+|+|++|||||++|....+.. ...|.|.|-. |..
T Consensus 146 ~aRfiNHSC~PN~~~~~~~~---~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~---------~~~~~C~CGs~~Crg 211 (222)
T 3ope_A 146 EARFINHSCDPNCEMQKWSV---NGVYRIGLYALKDMPAGTELTYDYNFHSFNV---------EKQQLCKCGFEKCRG 211 (222)
T ss_dssp GGGGCEECSSCSEEEEEEEE---TTEEEEEEEESSCBCTTCBCEECTTSSBCCC---------SCCCBCCCCCTTCCS
T ss_pred cceeeccCCCCCeEeEEEEE---CCeEEEEEEECCccCCCCEEEEECCCcccCC---------cCCCEeeCCCcCCCC
Confidence 35688999999987432211 1346899999999999999999999987653 2468888863 653
No 13
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=98.89 E-value=3e-10 Score=106.64 Aligned_cols=67 Identities=21% Similarity=0.373 Sum_probs=46.4
Q ss_pred Eecc-ccccccCCCCCCceeee-ccccccCCCceEEEEEccCCCCCCeeEEeecCCCCCHHHHHHHHhcCCCeeeeC
Q 046120 204 GIYL-KASFFNHDCLPNACRFD-YVDAAAENNTDIIVRMIHDVPQGREICLSYFPVNYDYSTRQKRLLYDYDFACDC 278 (381)
Q Consensus 204 gLyp-~~Sl~NHSC~PN~~~~~-~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~~~~~~Rr~~L~~~y~F~C~C 278 (381)
..+. .+.++||||.||+.... +.........+|.|+|+|+|++|||||++|.+..|.. ..+.|.|.|
T Consensus 211 ~~~GN~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~--------~~~~~~C~C 279 (287)
T 3hna_A 211 RFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDI--------KGKLFSCRC 279 (287)
T ss_dssp EEEECGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHH--------HTTTCCCCC
T ss_pred cccCCchheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCccccc--------CCCcCEeeC
Confidence 3344 35577999999987321 2221111235899999999999999999999754432 235799999
No 14
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=98.89 E-value=5.6e-10 Score=104.27 Aligned_cols=58 Identities=26% Similarity=0.424 Sum_probs=44.7
Q ss_pred ccccccCCCCCCceeee-ccccccCCCceEEEEEccCCCCCCeeEEeecCCCCCHHHHHHHHhcCCCeeeeCc
Q 046120 208 KASFFNHDCLPNACRFD-YVDAAAENNTDIIVRMIHDVPQGREICLSYFPVNYDYSTRQKRLLYDYDFACDCD 279 (381)
Q Consensus 208 ~~Sl~NHSC~PN~~~~~-~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~~~~~~Rr~~L~~~y~F~C~C~ 279 (381)
.+.++||||.||+.... +++ +..+|.|+|+|+|++|||||++|....++ ...|.|.|-
T Consensus 190 ~aRFiNHSC~PN~~~~~~~v~----g~~ri~~fA~RdI~~GEELT~dY~~~~~~----------~~~~~C~CG 248 (278)
T 3h6l_A 190 CSRFMNHSCEPNCETQKWTVN----GQLRVGFFTTKLVPSGSELTFDYQFQRYG----------KEAQKCFCG 248 (278)
T ss_dssp GGGGCEECSSCSEEEEEEEET----TEEEEEEEESSCBCTTCBCEECCTTTEEC----------SSCEECCCC
T ss_pred hhhhcccCCCCCceeEEEEeC----CceEEEEEECCccCCCCEEEEecCCCcCC----------CCCcEeECC
Confidence 36688999999976322 222 34688999999999999999999986543 356999995
No 15
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=98.87 E-value=2e-10 Score=83.17 Aligned_cols=57 Identities=28% Similarity=0.565 Sum_probs=37.0
Q ss_pred ccCCCCcEEEEcCcceeccccccccCcccccccccccCCCCCccCCCCCCC-cCccccchhhhhcCCchhhhHhH
Q 046120 24 QSLKAGQIVLRDSPILLYSALPFINSSSFCHNCFRKTMHSSSSICPSCSVA-FCSPKCSTAAASSSHSPYVCQAL 97 (381)
Q Consensus 24 rdi~~GevIl~e~P~v~~p~~~l~~~~~~C~~C~~~~~~~~~~~C~~C~~~-yCS~~C~~~a~~~~H~~~EC~~l 97 (381)
++|++||+||.+.| ....|..|++. .+.+|++|+.+ |||.+||..+|. .| +.+|..+
T Consensus 2 ~~~~~G~~il~~~~-----------~~~~C~~C~~~----~~~~Cs~C~~~~YCs~~CQ~~~W~-~H-k~~C~~~ 59 (64)
T 2odd_A 2 NLYFQGENLYFQGD-----------SSESCWNCGRK----ASETCSGCNTARYCGSFCQHKDWE-KH-HHICGQT 59 (64)
T ss_dssp -------------C-----------CSSSCTTTSSC----CCEEETTTSCCEESSHHHHHHHHH-HH-TTTTTSS
T ss_pred CcCCCCCEEeeCCC-----------CCCcCccccCC----CcccCCCCCChhhCCHHHHHHHHH-HH-hHHHhcc
Confidence 68999999999998 24589999883 47899999999 999999999996 68 8899754
No 16
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=98.82 E-value=1.8e-09 Score=102.36 Aligned_cols=75 Identities=27% Similarity=0.501 Sum_probs=36.6
Q ss_pred ccccccCCCCCCceeeecc-ccccCCCceEEEEEccCCCCCCeeEEeecCCCCCHHH-HHHHHhcCCCeeeeC--cccc
Q 046120 208 KASFFNHDCLPNACRFDYV-DAAAENNTDIIVRMIHDVPQGREICLSYFPVNYDYST-RQKRLLYDYDFACDC--DRCK 282 (381)
Q Consensus 208 ~~Sl~NHSC~PN~~~~~~~-d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~~~~~~-Rr~~L~~~y~F~C~C--~rC~ 282 (381)
.+.++||||.||+..+... +.......+|.|+|+|+|++|||||++|.+..|.... +....+....|.|.| +.|.
T Consensus 220 ~arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~~~~k~~~~~~C~CGs~~Cr 298 (302)
T 1ml9_A 220 PTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLCGTAKCR 298 (302)
T ss_dssp GGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC-----------------------------
T ss_pred HHHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCccccccccccccccCCCcEeeCCCCcCc
Confidence 4678999999999743221 1100012479999999999999999999988765432 111122235689999 3554
No 17
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=98.78 E-value=3.8e-09 Score=99.70 Aligned_cols=75 Identities=20% Similarity=0.388 Sum_probs=47.4
Q ss_pred ccccccCCCCCCceeee-ccccccCCCceEEEEEccCCCCCCeeEEeecCCCCCHHH----HHHHHhcCCCeeeeC--cc
Q 046120 208 KASFFNHDCLPNACRFD-YVDAAAENNTDIIVRMIHDVPQGREICLSYFPVNYDYST----RQKRLLYDYDFACDC--DR 280 (381)
Q Consensus 208 ~~Sl~NHSC~PN~~~~~-~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~~~~~~----Rr~~L~~~y~F~C~C--~r 280 (381)
.+.++||||.||+.... +++.......+|.|+|+|+|++|||||++|........+ ....-+....|.|.| +.
T Consensus 215 ~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~d~~~~~~~~~~~C~CGs~~ 294 (300)
T 2r3a_A 215 VSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKGSGDISSDSIDHSPAKKRVRTVCKCGAVT 294 (300)
T ss_dssp GGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGSSCC--------------CCCCBCCCCCTT
T ss_pred hHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCCccccccccccccccccccCCCEeeCCCcc
Confidence 57899999999987421 222111124689999999999999999999987422110 001112235689999 45
Q ss_pred cc
Q 046120 281 CK 282 (381)
Q Consensus 281 C~ 282 (381)
|.
T Consensus 295 Cr 296 (300)
T 2r3a_A 295 CR 296 (300)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 18
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=98.78 E-value=3.9e-09 Score=99.73 Aligned_cols=52 Identities=23% Similarity=0.393 Sum_probs=39.5
Q ss_pred ccccccCCCCCCceeee-ccccccCCCceEEEEEccCCCCCCeeEEeecCCCC
Q 046120 208 KASFFNHDCLPNACRFD-YVDAAAENNTDIIVRMIHDVPQGREICLSYFPVNY 259 (381)
Q Consensus 208 ~~Sl~NHSC~PN~~~~~-~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~~ 259 (381)
.+.++||||.||+.... +.+.......+|.|+|+|+|++|||||++|.+..+
T Consensus 213 ~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 265 (299)
T 1mvh_A 213 VSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKD 265 (299)
T ss_dssp GGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSS
T ss_pred hhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCccc
Confidence 46789999999997421 22211112358999999999999999999998876
No 19
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.71 E-value=6.1e-09 Score=96.41 Aligned_cols=49 Identities=18% Similarity=0.156 Sum_probs=37.0
Q ss_pred cccccCCCCCCceeeeccccccCCCceEEEEEccCCCCCCeeEEeecCCCC
Q 046120 209 ASFFNHDCLPNACRFDYVDAAAENNTDIIVRMIHDVPQGREICLSYFPVNY 259 (381)
Q Consensus 209 ~Sl~NHSC~PN~~~~~~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~~ 259 (381)
+.++||||.||+....+.+ + ..+..|.|+|+|+|++|||||++|.....
T Consensus 187 aRfiNHSC~PN~~~~~~~~-~-~~~~~i~i~A~RdI~~GEELt~dYg~~~~ 235 (261)
T 2f69_A 187 GHKANHSFTPNCIYDMFVH-P-RFGPIKCIRTLRAVEADEELTVAYGYDHS 235 (261)
T ss_dssp GGGCEECSSCSEEEEEEEE-T-TTEEEEEEEESSCBCTTCEEEECCCCCSC
T ss_pred eeeEeeCCCCCeEEEEEEc-C-CCCcEEEEEECcccCCCCEEEEEcCCccc
Confidence 5789999999998533221 1 01334589999999999999999997754
No 20
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=98.64 E-value=1.9e-08 Score=94.54 Aligned_cols=50 Identities=20% Similarity=0.342 Sum_probs=39.3
Q ss_pred ccccccCCCCCCceeee-ccccccCCCceEEEEEccCCCCCCeeEEeecCCCCC
Q 046120 208 KASFFNHDCLPNACRFD-YVDAAAENNTDIIVRMIHDVPQGREICLSYFPVNYD 260 (381)
Q Consensus 208 ~~Sl~NHSC~PN~~~~~-~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~~~ 260 (381)
.+.++||||.||+.... +.+. ...+|.|+|+|+|++|||||++|.+..|.
T Consensus 205 ~arfiNHSC~PN~~~~~~~~~~---~~~~i~~~A~rdI~~GEELt~dY~~~~~~ 255 (290)
T 3bo5_A 205 IGRFLNHSCEPNLLMIPVRIDS---MVPKLALFAAKDIVPEEELSYDYSGRYLN 255 (290)
T ss_dssp GGGGCEECSSCSEEEEEEESSS---SSCEEEEEESSCBCTTCEEEECTTSCTTC
T ss_pred chheeeecCCCCEEEEEEEeCC---CceEEEEEEccccCCCCEEEEECCCcccc
Confidence 46789999999997432 2221 13589999999999999999999988764
No 21
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=98.57 E-value=2.5e-08 Score=94.04 Aligned_cols=47 Identities=19% Similarity=0.186 Sum_probs=35.7
Q ss_pred cccccCCCCCCceeeeccccccCCCce-EEEEEccCCCCCCeeEEeecCCC
Q 046120 209 ASFFNHDCLPNACRFDYVDAAAENNTD-IIVRMIHDVPQGREICLSYFPVN 258 (381)
Q Consensus 209 ~Sl~NHSC~PN~~~~~~~d~~~~~~~~-l~vrA~r~I~~GeEl~isY~~~~ 258 (381)
++++||||.||+....+.+ + .... +.|+|+|||++|||||++|....
T Consensus 241 ar~iNHsc~pN~~~~~~~~-~--~~~~~~~~~a~r~I~~geElt~~Yg~~~ 288 (293)
T 1h3i_A 241 GHKANHSFTPNCIYDMFVH-P--RFGPIKCIRTLRAVEADEELTVAYGYDH 288 (293)
T ss_dssp GGGSEEESSCSEEEEEEEE-T--TTEEEEEEEESSCBCTTCEEEEEEETTB
T ss_pred eeeeccCCCCCeEEEEEEc-C--CCCcEEEEEECCccCCCCEEEEecCCCC
Confidence 6789999999998532221 1 2134 58999999999999999998754
No 22
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=98.54 E-value=4.9e-08 Score=82.63 Aligned_cols=45 Identities=18% Similarity=0.315 Sum_probs=38.3
Q ss_pred cccccCCCCC---CceeeeccccccCCCceEEEEEccCCCCCCeeEEeecCCCCC
Q 046120 209 ASFFNHDCLP---NACRFDYVDAAAENNTDIIVRMIHDVPQGREICLSYFPVNYD 260 (381)
Q Consensus 209 ~Sl~NHSC~P---N~~~~~~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~~~ 260 (381)
+.++||||.| |+..+. .+.+|.++|+|+|++||||++.|.+..++
T Consensus 100 ~RfINhSc~p~eqNl~~~~-------~~~~I~~~A~RdI~~GEEL~~dY~~~~~~ 147 (149)
T 2qpw_A 100 LRYVNWACSGEEQNLFPLE-------INRAIYYKTLKPIAPGEELLVWYNGEDNP 147 (149)
T ss_dssp GGGCEECBTTBTCCEEEEE-------ETTEEEEEESSCBCTTCBCEECCCCCCCC
T ss_pred eeeeeccCChhhcCEEEEE-------ECCEEEEEEccCCCCCCEEEEccCCccCC
Confidence 5789999999 987543 25789999999999999999999987654
No 23
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=98.48 E-value=7.9e-08 Score=95.76 Aligned_cols=96 Identities=17% Similarity=0.152 Sum_probs=68.5
Q ss_pred CCCHHHHHHHHHHhhccccccccCCcCCCCCCccceeEEeccccccccCCCCCCceeeecc-cc-cc--CCCceEEEEEc
Q 046120 166 STTIELTAALLAKDRLNAFGLMEPYIEGQDGRRSVRAYGIYLKASFFNHDCLPNACRFDYV-DA-AA--ENNTDIIVRMI 241 (381)
Q Consensus 166 ~~~~~~i~~ll~~l~~Nsf~i~~~~~~~~~~~~~~~g~gLyp~~Sl~NHSC~PN~~~~~~~-d~-~~--~~~~~l~vrA~ 241 (381)
.++.+.+......+...+|.+.. + .+.+|.|.+.|+||||.||...+.+. +. .+ ..+..++++|.
T Consensus 158 ~~t~~~f~wA~~~v~SRaf~~~~-------~----~~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~ 226 (440)
T 2h21_A 158 PVTLDDFFWAFGILRSRAFSRLR-------N----ENLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSP 226 (440)
T ss_dssp CCCHHHHHHHHHHHHHHCBCCC--------------CCBCCSSTTSCEECTTCCCCCCEEEC----------CEEEEEES
T ss_pred CCCHHHHHHHHHHhcccceeccC-------C----CceEEeechHhhcCCCCcccccceeeecCcccccCCCceEEEEEC
Confidence 35788888899999999996532 1 24699999999999999985322121 10 00 02457999999
Q ss_pred cCCCCCCeeEEeecCCCCCHHHHHHHHhcCCCeeee
Q 046120 242 HDVPQGREICLSYFPVNYDYSTRQKRLLYDYDFACD 277 (381)
Q Consensus 242 r~I~~GeEl~isY~~~~~~~~~Rr~~L~~~y~F~C~ 277 (381)
++|++||||+|||++.. +. ..|...|||...
T Consensus 227 ~~i~~Geei~~sYG~~~-~N----~~LL~~YGFv~~ 257 (440)
T 2h21_A 227 LSVKAGEQVYIQYDLNK-SN----AELALDYGFIEP 257 (440)
T ss_dssp SCBCTTSBCEECSCTTC-CH----HHHHHHSSCCCS
T ss_pred CCCCCCCEEEEeCCCCC-CH----HHHHHhCCCCcC
Confidence 99999999999999862 22 346778999764
No 24
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=97.73 E-value=4.9e-06 Score=59.00 Aligned_cols=43 Identities=35% Similarity=0.757 Sum_probs=37.1
Q ss_pred CcccccccccccCCCCCccCCCCCCC-cCccccchhhhhcCCchhhhHhH
Q 046120 49 SSSFCHNCFRKTMHSSSSICPSCSVA-FCSPKCSTAAASSSHSPYVCQAL 97 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~~~~~C~~C~~~-yCS~~C~~~a~~~~H~~~EC~~l 97 (381)
....|..|.+. .+.+|.+|+.+ |||.+||..+|. .| +.+|..+
T Consensus 14 ~~~~C~~C~~~----~~~~Cs~C~~v~YCs~~CQ~~~W~-~H-k~~C~~~ 57 (60)
T 2dj8_A 14 SSESCWNCGRK----ASETCSGCNTARYCGSFCQHKDWE-KH-HHICSGP 57 (60)
T ss_dssp CSCCCSSSCSC----CCEECTTTSCCEESSHHHHHHTHH-HH-TTTSCCS
T ss_pred CCcccccCCCC----CcccCCCCCCEeeeCHHHHHHHHH-HH-HHHHHhc
Confidence 56799999983 47899999999 999999999996 58 8899754
No 25
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=97.70 E-value=1.1e-05 Score=55.33 Aligned_cols=41 Identities=29% Similarity=0.689 Sum_probs=33.9
Q ss_pred CcccccccccccCCCCCccCCCCCCC-cCccccchhhhhcCCchhhhH
Q 046120 49 SSSFCHNCFRKTMHSSSSICPSCSVA-FCSPKCSTAAASSSHSPYVCQ 95 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~~~~~C~~C~~~-yCS~~C~~~a~~~~H~~~EC~ 95 (381)
....|..|++. .+.+|++|+.+ |||.+||..+|. .| +.+|.
T Consensus 8 ~~~~C~~C~~~----~~~~C~~C~~~~YCs~~CQ~~~W~-~H-k~~C~ 49 (52)
T 2jw6_A 8 KEQSCVNCGRE----AMSECTGCHKVNYCSTFCQRKDWK-DH-QHICG 49 (52)
T ss_dssp ---CCSSSSSS----CSEECTTTCSSEESSHHHHHHHTT-TG-GGTTT
T ss_pred cCCcCCCCCCC----CcCcCCCCCCEeecCHHHHHHHHH-HH-CHHHc
Confidence 56789999984 47899999999 999999999996 58 88986
No 26
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=97.64 E-value=1.8e-05 Score=57.83 Aligned_cols=44 Identities=20% Similarity=0.551 Sum_probs=38.0
Q ss_pred CcccccccccccCCCCCccCCCCCCC-cCccccchhhhhcCCchhhhHhHH
Q 046120 49 SSSFCHNCFRKTMHSSSSICPSCSVA-FCSPKCSTAAASSSHSPYVCQALT 98 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~~~~~C~~C~~~-yCS~~C~~~a~~~~H~~~EC~~l~ 98 (381)
....|..|.+. ...+|.+|+.+ |||.+||..+|.. | +.+|..+.
T Consensus 14 ~~~~C~~C~~~----~~~~Cs~Ck~v~YCs~eCQ~~~W~~-H-K~~C~~~~ 58 (70)
T 2d8q_A 14 ERPRCAYCSAE----ASKRCSRCQNEWYCCRECQVKHWEK-H-GKTCVLAA 58 (70)
T ss_dssp CCCBCSSSCCB----CCCBCTTTSCCBCSCHHHHHHTHHH-H-HHHCCCCC
T ss_pred CCCcCCCCCCc----ccccCCCCCCEeeCCHHHhHHHHHH-H-HHHHHHHH
Confidence 56799999884 47899999999 9999999999965 8 89998654
No 27
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=97.60 E-value=4.9e-05 Score=64.27 Aligned_cols=44 Identities=16% Similarity=0.186 Sum_probs=35.3
Q ss_pred cccccCCCCC---CceeeeccccccCCCceEEEEEccCCCCCCeeEEeecCCCC
Q 046120 209 ASFFNHDCLP---NACRFDYVDAAAENNTDIIVRMIHDVPQGREICLSYFPVNY 259 (381)
Q Consensus 209 ~Sl~NHSC~P---N~~~~~~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~~ 259 (381)
+.++||+|.+ |+..+.. +.++.++|+|+|++||||++-|++..+
T Consensus 98 mR~Vn~A~~~~eqNl~a~q~-------~~~I~~~a~rdI~pGeELlv~Yg~~y~ 144 (151)
T 3db5_A 98 MMFVRKARNREEQNLVAYPH-------DGKIFFCTSQDIPPENELLFYYSRDYA 144 (151)
T ss_dssp GGGCEECSSTTTCCEEEEEE-------TTEEEEEESSCBCTTCBCEEEECC---
T ss_pred eeEEEecCCcccCceEEEEE-------CCEEEEEEccccCCCCEEEEecCHHHH
Confidence 5788999975 8875433 578999999999999999999998753
No 28
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=97.56 E-value=1.5e-05 Score=56.45 Aligned_cols=43 Identities=35% Similarity=0.750 Sum_probs=36.9
Q ss_pred CcccccccccccCCCCCccCCCCCCC-cCccccchhhhhcCCchhhhHhH
Q 046120 49 SSSFCHNCFRKTMHSSSSICPSCSVA-FCSPKCSTAAASSSHSPYVCQAL 97 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~~~~~C~~C~~~-yCS~~C~~~a~~~~H~~~EC~~l 97 (381)
....|..|.+. .+.+|.+|+.+ |||.+||..+|. .| +.+|..+
T Consensus 12 ~~~~C~~C~~~----~~~~Cs~C~~v~YCs~~CQ~~dW~-~H-k~~C~~~ 55 (60)
T 2od1_A 12 SSESCWNCGRK----ASETCSGCNTARYCGSFCQHKDWE-KH-HHICGQT 55 (60)
T ss_dssp CSSCCTTTSSC----CCEECTTTSCCEESSHHHHHHHHH-HH-TTTSSCS
T ss_pred CCCccccCCCc----ccccCCCCCCeeecCHHHHHHHHH-HH-hHHHccc
Confidence 56799999983 47899999999 999999999996 68 8899744
No 29
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=97.43 E-value=0.00011 Score=63.22 Aligned_cols=43 Identities=16% Similarity=0.209 Sum_probs=35.3
Q ss_pred cccccCCCC---CCceeeeccccccCCCceEEEEEccCCCCCCeeEEeecCCC
Q 046120 209 ASFFNHDCL---PNACRFDYVDAAAENNTDIIVRMIHDVPQGREICLSYFPVN 258 (381)
Q Consensus 209 ~Sl~NHSC~---PN~~~~~~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~ 258 (381)
+.++||+|. +|+..+.. +.+|.++|+|+|++|+||++-|++..
T Consensus 102 mR~Vn~A~~~~eqNl~a~q~-------~~~I~~~a~RdI~pGeELlvwYg~~y 147 (170)
T 3ep0_A 102 MTYIKCARNEQEQNLEVVQI-------GTSIFYKAIEMIPPDQELLVWYGNSH 147 (170)
T ss_dssp GGGCEECSSTTTCCEEEEEE-------TTEEEEEESSCBCTTCBCEEEECC--
T ss_pred eeeEEecCCcccCCeeeEEE-------CCEEEEEECcCcCCCCEEEEeeCHHH
Confidence 567899997 88765433 57999999999999999999999964
No 30
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=97.16 E-value=0.00025 Score=62.31 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=35.5
Q ss_pred cccccCCCC---CCceeeeccccccCCCceEEEEEccCCCCCCeeEEeecCC
Q 046120 209 ASFFNHDCL---PNACRFDYVDAAAENNTDIIVRMIHDVPQGREICLSYFPV 257 (381)
Q Consensus 209 ~Sl~NHSC~---PN~~~~~~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~ 257 (381)
+.++||+|. +|+..+.. +.+|.++|+|+|++||||++-|++.
T Consensus 132 mRfVn~A~~~~eqNl~a~q~-------~~~I~y~a~RdI~pGeELlvwYg~~ 176 (196)
T 3dal_A 132 MRYVNPAHSPREQNLAACQN-------GMNIYFYTIKPIPANQELLVWYCRD 176 (196)
T ss_dssp GGGCEECSSTTTCCEEEEEE-------TTEEEEEESSCBCTTCBCEEEECHH
T ss_pred EEeEEecCCcccCCcEEEEE-------CCEEEEEECcccCCCCEEEEecCHH
Confidence 568899997 68765433 5799999999999999999999864
No 31
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=96.88 E-value=0.00071 Score=54.56 Aligned_cols=36 Identities=19% Similarity=0.347 Sum_probs=30.7
Q ss_pred CCceEEEEeCCCccEEEEcccCCCCcEEEEcCcceec
Q 046120 5 SETVTVAEIEGRGRGLVSTQSLKAGQIVLRDSPILLY 41 (381)
Q Consensus 5 s~~i~v~~~~~~GRglvAtrdi~~GevIl~e~P~v~~ 41 (381)
++.++|+.++.+|+||||+++|++|++|. |-|-...
T Consensus 3 ~~~~~v~~s~~~G~GvfA~~~I~~G~~I~-ey~g~vi 38 (119)
T 1n3j_A 3 NDRVIVKKSPLGGYGVFARKSFEKGELVE-ECLCIVR 38 (119)
T ss_dssp CSSEEEECSCSSCCEEEECCCBCSCEEEC-CCCCEEE
T ss_pred CCCEEEEECCCceeEEEECCcCCCCCEEE-EeeEEEE
Confidence 48999999999999999999999999998 5444333
No 32
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=96.84 E-value=0.00069 Score=57.14 Aligned_cols=42 Identities=14% Similarity=0.182 Sum_probs=35.7
Q ss_pred cccccCCCC---CCceeeeccccccCCCceEEEEEccCCCCCCeeEEeecCC
Q 046120 209 ASFFNHDCL---PNACRFDYVDAAAENNTDIIVRMIHDVPQGREICLSYFPV 257 (381)
Q Consensus 209 ~Sl~NHSC~---PN~~~~~~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~ 257 (381)
+.++||+|. +|+..+. .+.++.++|+|+|++|+||++-|.+.
T Consensus 97 mr~vn~a~~~~eqNl~a~q-------~~~~I~~~~~r~I~pGeELlv~Y~~~ 141 (152)
T 3ihx_A 97 MMFVRPAQNHLEQNLVAYQ-------YGHHVYYTTIKNVEPKQELKVWYAAS 141 (152)
T ss_dssp GGGCCBCCSTTTCCEEEEE-------CSSSEEEEESSCBCTTCBCCEEECHH
T ss_pred eeeeeccCCccCCCcEEEE-------eCCeEEEEEeeecCCCCEEEEechHH
Confidence 578899998 7877543 36789999999999999999999875
No 33
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=96.61 E-value=0.0022 Score=54.70 Aligned_cols=38 Identities=26% Similarity=0.538 Sum_probs=33.4
Q ss_pred CCCCceEEEEeCCCccEEEEcccCCCCcEEEEcCccee
Q 046120 3 AVSETVTVAEIEGRGRGLVSTQSLKAGQIVLRDSPILL 40 (381)
Q Consensus 3 ~~s~~i~v~~~~~~GRglvAtrdi~~GevIl~e~P~v~ 40 (381)
+...+++|..++++|+||||+++|++|++|..-..-+.
T Consensus 27 g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi 64 (166)
T 3f9x_A 27 GKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLI 64 (166)
T ss_dssp TCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEE
T ss_pred CCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEc
Confidence 45678999999999999999999999999998776554
No 34
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=96.58 E-value=0.0014 Score=58.86 Aligned_cols=43 Identities=16% Similarity=0.138 Sum_probs=36.1
Q ss_pred cccccCCCC---CCceeeeccccccCCCceEEEEEccCCCCCCeeEEeecCCC
Q 046120 209 ASFFNHDCL---PNACRFDYVDAAAENNTDIIVRMIHDVPQGREICLSYFPVN 258 (381)
Q Consensus 209 ~Sl~NHSC~---PN~~~~~~~d~~~~~~~~l~vrA~r~I~~GeEl~isY~~~~ 258 (381)
+.++||+|. +|+..+.+ +.+|.++|+|+|++|+||++-|++.+
T Consensus 141 mRfVn~Ar~~~EqNL~A~q~-------~~~Iyy~a~RdI~pGeELlVwYg~~Y 186 (237)
T 3ray_A 141 MRYVVISREEREQNLLAFQH-------SERIYFRACRDIRPGEWLRVWYSEDY 186 (237)
T ss_dssp GGGCEECCCTTTCCEEEEEE-------TTEEEEEESSCBCTTCBCEEEECHHH
T ss_pred eeEEEcCCCcccccceeEEe-------CCEEEEEEccccCCCCEEEEeeCHHH
Confidence 468999997 68765433 57999999999999999999999864
No 35
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=95.02 E-value=0.017 Score=51.65 Aligned_cols=35 Identities=23% Similarity=0.386 Sum_probs=31.1
Q ss_pred CceEEEEeCCCccEEEEcccCCCCcEEEEcCccee
Q 046120 6 ETVTVAEIEGRGRGLVSTQSLKAGQIVLRDSPILL 40 (381)
Q Consensus 6 ~~i~v~~~~~~GRglvAtrdi~~GevIl~e~P~v~ 40 (381)
..++|..++++|+||+|+++|++|++|..-...+.
T Consensus 74 ~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi 108 (222)
T 3ope_A 74 QCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVV 108 (222)
T ss_dssp SCCEEEECTTSSEEEECSSCBCTTCEEEECCSEEE
T ss_pred ccEEEEEcCCCceEEEECceECCCCEEEEecceec
Confidence 45899999999999999999999999998777554
No 36
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=94.83 E-value=0.024 Score=49.54 Aligned_cols=35 Identities=29% Similarity=0.459 Sum_probs=30.4
Q ss_pred CceEEEEeCCCccEEEEcccCCCCcEEEEcCccee
Q 046120 6 ETVTVAEIEGRGRGLVSTQSLKAGQIVLRDSPILL 40 (381)
Q Consensus 6 ~~i~v~~~~~~GRglvAtrdi~~GevIl~e~P~v~ 40 (381)
..|+|..++.+|+||||+++|++|++|..-..-+.
T Consensus 52 ~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi 86 (192)
T 2w5y_A 52 EAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVI 86 (192)
T ss_dssp HHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEE
T ss_pred CcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEe
Confidence 57899999999999999999999999996555443
No 37
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=94.74 E-value=0.031 Score=51.73 Aligned_cols=38 Identities=26% Similarity=0.312 Sum_probs=32.5
Q ss_pred CCCCceEEEEeCCCccEEEEcccCCCCcEEEEcCccee
Q 046120 3 AVSETVTVAEIEGRGRGLVSTQSLKAGQIVLRDSPILL 40 (381)
Q Consensus 3 ~~s~~i~v~~~~~~GRglvAtrdi~~GevIl~e~P~v~ 40 (381)
+....++|..++++|.||+|+++|++|++|..-..-+.
T Consensus 114 g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi 151 (278)
T 3h6l_A 114 KQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVL 151 (278)
T ss_dssp TCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEE
T ss_pred CCccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeec
Confidence 34568999999999999999999999999987666443
No 38
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=94.45 E-value=0.037 Score=51.49 Aligned_cols=38 Identities=18% Similarity=0.252 Sum_probs=33.0
Q ss_pred CCCCceEEEEeCCCccEEEEcccCCCCcEEEEcCccee
Q 046120 3 AVSETVTVAEIEGRGRGLVSTQSLKAGQIVLRDSPILL 40 (381)
Q Consensus 3 ~~s~~i~v~~~~~~GRglvAtrdi~~GevIl~e~P~v~ 40 (381)
+....++|..++.+|.||+|+++|++|+.|..-..-+.
T Consensus 144 g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi 181 (287)
T 3hna_A 144 GLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELI 181 (287)
T ss_dssp CCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEE
T ss_pred CCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEc
Confidence 34578999999999999999999999999988766554
No 39
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=93.30 E-value=0.073 Score=48.92 Aligned_cols=32 Identities=16% Similarity=0.191 Sum_probs=28.0
Q ss_pred CCCCceEEEEeCC-----CccEEEEcccCCCCcEEEE
Q 046120 3 AVSETVTVAEIEG-----RGRGLVSTQSLKAGQIVLR 34 (381)
Q Consensus 3 ~~s~~i~v~~~~~-----~GRglvAtrdi~~GevIl~ 34 (381)
....+++|..+.. +|+||||+++|++||.|.+
T Consensus 128 ~~~~gfeV~~~~ry~~e~~G~GlfA~~~I~kGe~I~E 164 (273)
T 3s8p_A 128 ATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIEL 164 (273)
T ss_dssp SGGGCEEEEEECCCTTCSSEEEEEESSCBCTTCEEEE
T ss_pred CCCCCceEEeccceeecCCCceEEECCccCCCCEEEE
Confidence 4567899999875 8999999999999999985
No 40
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=93.11 E-value=0.082 Score=49.19 Aligned_cols=35 Identities=17% Similarity=0.237 Sum_probs=30.1
Q ss_pred CCCCceEEEEeCCCccEEEEcccCCCCcEEEEcCc
Q 046120 3 AVSETVTVAEIEGRGRGLVSTQSLKAGQIVLRDSP 37 (381)
Q Consensus 3 ~~s~~i~v~~~~~~GRglvAtrdi~~GevIl~e~P 37 (381)
+....++|..++.+|.||+|+++|++|+.|.+-..
T Consensus 123 g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~G 157 (290)
T 3bo5_A 123 GLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAG 157 (290)
T ss_dssp CCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCE
T ss_pred CCcccEEEEEcCCCcceEeECCccCCCCEEEEEee
Confidence 34568999999999999999999999999986443
No 41
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=92.64 E-value=0.1 Score=48.71 Aligned_cols=37 Identities=14% Similarity=0.136 Sum_probs=31.2
Q ss_pred CCCCceEEEEeCCCccEEEEcccCCCCcEEEEcCcce
Q 046120 3 AVSETVTVAEIEGRGRGLVSTQSLKAGQIVLRDSPIL 39 (381)
Q Consensus 3 ~~s~~i~v~~~~~~GRglvAtrdi~~GevIl~e~P~v 39 (381)
+....++|..++.+|.||+|+++|++|+.|.+-..-+
T Consensus 134 g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gev 170 (299)
T 1mvh_A 134 GRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEV 170 (299)
T ss_dssp CCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEE
T ss_pred cccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEE
Confidence 3457899999999999999999999999998654433
No 42
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=92.11 E-value=0.11 Score=48.49 Aligned_cols=35 Identities=23% Similarity=0.299 Sum_probs=30.3
Q ss_pred CCCCceEEEEeCCCccEEEEcccCCCCcEEEEcCc
Q 046120 3 AVSETVTVAEIEGRGRGLVSTQSLKAGQIVLRDSP 37 (381)
Q Consensus 3 ~~s~~i~v~~~~~~GRglvAtrdi~~GevIl~e~P 37 (381)
+....++|..++.+|.||+|+++|++|+.|.+-..
T Consensus 130 g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~G 164 (302)
T 1ml9_A 130 GRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLG 164 (302)
T ss_dssp CCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCC
T ss_pred CCccceEEEEcCCCceEEEECCeeCCCCEEEEEee
Confidence 34568999999999999999999999999986443
No 43
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=91.09 E-value=0.18 Score=46.14 Aligned_cols=36 Identities=28% Similarity=0.255 Sum_probs=29.6
Q ss_pred CCceEEEEeCC--CccEEEEcccCCCCcEEEEcCccee
Q 046120 5 SETVTVAEIEG--RGRGLVSTQSLKAGQIVLRDSPILL 40 (381)
Q Consensus 5 s~~i~v~~~~~--~GRglvAtrdi~~GevIl~e~P~v~ 40 (381)
+..++|+.++. +|+||||+++|++|++|..-...+.
T Consensus 108 ~~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi 145 (261)
T 2f69_A 108 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRI 145 (261)
T ss_dssp HTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEE
T ss_pred CceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEe
Confidence 35689998875 5999999999999999987666543
No 44
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.65 E-value=0.053 Score=37.24 Aligned_cols=31 Identities=32% Similarity=0.841 Sum_probs=25.6
Q ss_pred CcccccccccccCCCCCccCCCCCCCcCccccchh
Q 046120 49 SSSFCHNCFRKTMHSSSSICPSCSVAFCSPKCSTA 83 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~~~~~C~~C~~~yCS~~C~~~ 83 (381)
....|.-|.. . ..+.||+|+..|||-.|.+.
T Consensus 11 ~~~~C~vC~~-~---~kY~CPrC~~~yCSl~C~k~ 41 (56)
T 2yqq_A 11 STVVCVICLE-K---PKYRCPACRVPYCSVVCFRK 41 (56)
T ss_dssp CCCCCTTTCS-C---CSEECTTTCCEESSHHHHHH
T ss_pred CCCccCcCcC-C---CeeeCCCCCCCeeCHHHHHH
Confidence 4457999987 2 57899999999999999864
No 45
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=90.49 E-value=0.18 Score=45.62 Aligned_cols=33 Identities=18% Similarity=0.119 Sum_probs=27.5
Q ss_pred CCCCceEEEEeC-----CCccEEEEcccCCCCcEEEEc
Q 046120 3 AVSETVTVAEIE-----GRGRGLVSTQSLKAGQIVLRD 35 (381)
Q Consensus 3 ~~s~~i~v~~~~-----~~GRglvAtrdi~~GevIl~e 35 (381)
....+++|..+. ++|+||||+++|++||+|..-
T Consensus 100 ~~~~g~eV~~~~Ry~~~~~G~Gv~A~~~I~kGE~I~ey 137 (247)
T 3rq4_A 100 LPESGFTILPCTRYSMETNGAKIVSTRAWKKNEKLELL 137 (247)
T ss_dssp SGGGCEEEEECCCCTTCSSCEEEEESSCBCTTCEEEEE
T ss_pred CCCCCcEEEeeeeeeecCCcceEEeCCccCCCCEEEEE
Confidence 345788898864 579999999999999999763
No 46
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=90.01 E-value=0.25 Score=45.86 Aligned_cols=35 Identities=26% Similarity=0.242 Sum_probs=28.3
Q ss_pred CceEEEEeCC--CccEEEEcccCCCCcEEEEcCccee
Q 046120 6 ETVTVAEIEG--RGRGLVSTQSLKAGQIVLRDSPILL 40 (381)
Q Consensus 6 ~~i~v~~~~~--~GRglvAtrdi~~GevIl~e~P~v~ 40 (381)
..++|+.++. +|+||||+++|++|++|..-..-+.
T Consensus 163 ~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i 199 (293)
T 1h3i_A 163 ERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRI 199 (293)
T ss_dssp TTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEE
T ss_pred eeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEc
Confidence 4688888875 5599999999999999987665543
No 47
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=89.59 E-value=0.31 Score=40.56 Aligned_cols=30 Identities=17% Similarity=0.165 Sum_probs=25.6
Q ss_pred CCCceEEEEeC--CCccEEEEcccCCCCcEEE
Q 046120 4 VSETVTVAEIE--GRGRGLVSTQSLKAGQIVL 33 (381)
Q Consensus 4 ~s~~i~v~~~~--~~GRglvAtrdi~~GevIl 33 (381)
....++|+.+. ++|.||+|+++|++|+.|.
T Consensus 27 lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~g 58 (149)
T 2qpw_A 27 LPEEVRLFPSAVDKTRIGVWATKPILKGKKFG 58 (149)
T ss_dssp CCTTEEEEECSSCTTSEEEEESSCBCTTCEEC
T ss_pred CCCCeEEEEcCCCCCceEEEECCccCCCCEEE
Confidence 45678999885 6799999999999999973
No 48
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=89.51 E-value=0.069 Score=36.97 Aligned_cols=35 Identities=23% Similarity=0.700 Sum_probs=26.2
Q ss_pred CcccccccccccCCCCCccCCCCCCCcCccccchh
Q 046120 49 SSSFCHNCFRKTMHSSSSICPSCSVAFCSPKCSTA 83 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~~~~~C~~C~~~yCS~~C~~~ 83 (381)
....|..|.........+.||+|+..|||-.|.+.
T Consensus 10 ~~~~C~vC~~~~~~~akY~CPrC~~rYCSl~C~k~ 44 (59)
T 1x4s_A 10 PAGPCGFCPAGEVQPARYTCPRCNAPYCSLRCYRT 44 (59)
T ss_dssp CCEEECSSCTTCCEEECEECTTTCCEESSHHHHHH
T ss_pred CCCcCcCCCCCcCCCccccCcCCCCCccChHHHHH
Confidence 34689999752111257899999999999999863
No 49
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=88.24 E-value=0.44 Score=44.39 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=27.9
Q ss_pred CCCceEEEEeC-CCccEEEEcccCCCCcEEEEcCc
Q 046120 4 VSETVTVAEIE-GRGRGLVSTQSLKAGQIVLRDSP 37 (381)
Q Consensus 4 ~s~~i~v~~~~-~~GRglvAtrdi~~GevIl~e~P 37 (381)
....++|..+. .+|.||+|+++|++|+.|.+-..
T Consensus 138 ~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~G 172 (300)
T 2r3a_A 138 TQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVG 172 (300)
T ss_dssp CCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECC
T ss_pred ccccEEEEEeCCCceEEEEeCccccCCCEeEEEee
Confidence 34577887775 69999999999999999986544
No 50
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=86.87 E-value=0.43 Score=46.82 Aligned_cols=23 Identities=22% Similarity=0.460 Sum_probs=20.2
Q ss_pred CCccEEEEcccCCCCcEEEEcCc
Q 046120 15 GRGRGLVSTQSLKAGQIVLRDSP 37 (381)
Q Consensus 15 ~~GRglvAtrdi~~GevIl~e~P 37 (381)
..||||||+++|++||+|++.+.
T Consensus 31 ~~GrGl~A~~~I~~ge~ll~IP~ 53 (440)
T 2h21_A 31 TEGLGLVALKDISRNDVILQVPK 53 (440)
T ss_dssp TTEEEEEESSCBCTTEEEEEEEG
T ss_pred CCCCEEEEcccCCCCCEEEEeCh
Confidence 36999999999999999998644
No 51
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.65 E-value=0.42 Score=35.22 Aligned_cols=22 Identities=23% Similarity=0.421 Sum_probs=18.5
Q ss_pred CCCccEEEEcccCCCCcEEEEc
Q 046120 14 EGRGRGLVSTQSLKAGQIVLRD 35 (381)
Q Consensus 14 ~~~GRglvAtrdi~~GevIl~e 35 (381)
...+|.|||+++|++||+|=.+
T Consensus 3 ~~~rrslvA~rdI~~Gevit~~ 24 (79)
T 1wvo_A 3 SGSSGSVVAKVKIPEGTILTMD 24 (79)
T ss_dssp CCCCCEEEESSCBCTTCBCCGG
T ss_pred ccccEEEEEeCccCCCCCcCHH
Confidence 3568999999999999988554
No 52
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=83.96 E-value=0.84 Score=38.79 Aligned_cols=30 Identities=30% Similarity=0.407 Sum_probs=25.3
Q ss_pred CCceEEEEe--CCCccEEEEcccCCCCcEEEE
Q 046120 5 SETVTVAEI--EGRGRGLVSTQSLKAGQIVLR 34 (381)
Q Consensus 5 s~~i~v~~~--~~~GRglvAtrdi~~GevIl~ 34 (381)
-..++|+.+ ++.|.||+|+++|++|+.+-.
T Consensus 26 P~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGp 57 (170)
T 3ep0_A 26 PAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGP 57 (170)
T ss_dssp CTTEEEEECSSSSCSEEEEESSCBCTTCEEEE
T ss_pred CCCeEEEEcCCCCCceEEEECcccCCCCEEEe
Confidence 467899987 467999999999999998753
No 53
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=83.95 E-value=0.73 Score=30.53 Aligned_cols=37 Identities=22% Similarity=0.477 Sum_probs=26.6
Q ss_pred hcccCCCCcce-eeecCCCCCCCCCceeeeCCccCcccccCccCC
Q 046120 332 RYMCDRDNCWG-TLAPLPPSDATPSTVMECNVCGNLKNDAIGRED 375 (381)
Q Consensus 332 ~~~C~~~~C~g-~~~p~~~~~~~~~~~~~C~~C~~~~~~~~~~~~ 375 (381)
.+.||. |+| .|. .++.. ..+.|..||.+..+..+..+
T Consensus 5 ~~~CP~--C~~~~l~-~d~~~----gelvC~~CG~v~~e~~id~~ 42 (50)
T 1pft_A 5 QKVCPA--CESAELI-YDPER----GEIVCAKCGYVIEENIIDMG 42 (50)
T ss_dssp CCSCTT--TSCCCEE-EETTT----TEEEESSSCCBCCCCCCCCC
T ss_pred cEeCcC--CCCcceE-EcCCC----CeEECcccCCcccccccccC
Confidence 467997 777 554 33322 46999999999998888654
No 54
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=80.79 E-value=1.2 Score=37.06 Aligned_cols=29 Identities=7% Similarity=0.130 Sum_probs=22.2
Q ss_pred CCceEEEEe-CCCccEEEEcccCCCCcEEE
Q 046120 5 SETVTVAEI-EGRGRGLVSTQSLKAGQIVL 33 (381)
Q Consensus 5 s~~i~v~~~-~~~GRglvAtrdi~~GevIl 33 (381)
-..++|+.+ ++.|.||+|++.|++|+.+-
T Consensus 22 P~~l~l~~S~~~~g~GVfa~~~Ip~G~~fG 51 (151)
T 3db5_A 22 PKQLVLRQSIVGAEVGVWTGETIPVRTCFG 51 (151)
T ss_dssp CTTEEEEECC---CEEEEESSCBCTTCEEC
T ss_pred CCCeEEEEccCCCceEEEEecccCCCCEEE
Confidence 356888885 57899999999999999873
No 55
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=76.24 E-value=1.9 Score=37.51 Aligned_cols=29 Identities=10% Similarity=0.067 Sum_probs=24.5
Q ss_pred CCceEEEEeC--CCccEEEEcccCCCCcEEE
Q 046120 5 SETVTVAEIE--GRGRGLVSTQSLKAGQIVL 33 (381)
Q Consensus 5 s~~i~v~~~~--~~GRglvAtrdi~~GevIl 33 (381)
-..++|+.+. +.|.||+|++.|++|+.+-
T Consensus 57 P~~L~lr~S~i~~~G~GVfa~~~IpkGt~fG 87 (196)
T 3dal_A 57 PRNLLFKYATNSEEVIGVMSKEYIPKGTRFG 87 (196)
T ss_dssp CTTEEEEECTTSCCEEEEEESSCBCTTEEEC
T ss_pred CCCeEEEECCCCCceeEEEEccccCCCCEEE
Confidence 4578888885 4899999999999999864
No 56
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=75.82 E-value=0.85 Score=31.41 Aligned_cols=41 Identities=20% Similarity=0.186 Sum_probs=28.1
Q ss_pred hHhhhcccCCCCcce-eeecCCCCCCCCCceeeeCCccCcccccCccCC
Q 046120 328 YFFMRYMCDRDNCWG-TLAPLPPSDATPSTVMECNVCGNLKNDAIGRED 375 (381)
Q Consensus 328 ~~~~~~~C~~~~C~g-~~~p~~~~~~~~~~~~~C~~C~~~~~~~~~~~~ 375 (381)
.++..+.||. |++ .+. .+.. ...+.|..||.++.+..+-.+
T Consensus 7 ~ll~~~~Cp~--C~~~~lv-~D~~----~ge~vC~~CGlVl~e~~iD~g 48 (58)
T 1dl6_A 7 DALPRVTCPN--HPDAILV-EDYR----AGDMICPECGLVVGDRVIDVG 48 (58)
T ss_dssp CCCSCCSBTT--BSSSCCE-ECSS----SCCEECTTTCCEECCSCCCCC
T ss_pred hccccccCcC--CCCCcee-EeCC----CCeEEeCCCCCEEeccccccC
Confidence 3566779998 765 333 3221 146999999999998877554
No 57
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=73.05 E-value=1.4 Score=32.80 Aligned_cols=33 Identities=12% Similarity=0.261 Sum_probs=23.2
Q ss_pred hhcccCCCCcceeeecCCCCCCCCCceeeeCCccCccccc
Q 046120 331 MRYMCDRDNCWGTLAPLPPSDATPSTVMECNVCGNLKNDA 370 (381)
Q Consensus 331 ~~~~C~~~~C~g~~~p~~~~~~~~~~~~~C~~C~~~~~~~ 370 (381)
..|.||. |++.++ ..+.. ..|.|..|+.+...-
T Consensus 26 ~~y~Cp~--CG~~~v-~r~at----GiW~C~~Cg~~~agg 58 (83)
T 1vq8_Z 26 EDHACPN--CGEDRV-DRQGT----GIWQCSYCDYKFTGG 58 (83)
T ss_dssp SCEECSS--SCCEEE-EEEET----TEEEETTTCCEEECC
T ss_pred ccCcCCC--CCCcce-eccCC----CeEECCCCCCEecCC
Confidence 5789998 877554 22322 479999999986554
No 58
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=72.66 E-value=0.95 Score=31.31 Aligned_cols=35 Identities=29% Similarity=0.620 Sum_probs=24.7
Q ss_pred hcccCCCCcceeeecCCCCCCCCCceeeeCCccCcc
Q 046120 332 RYMCDRDNCWGTLAPLPPSDATPSTVMECNVCGNLK 367 (381)
Q Consensus 332 ~~~C~~~~C~g~~~p~~~~~~~~~~~~~C~~C~~~~ 367 (381)
-++|.+.+|.++|-|.-.-+... ..|+|+.|+..-
T Consensus 9 pvRC~r~~CraylNP~~~~~~~~-~~W~C~~C~~~N 43 (59)
T 2yrc_A 9 PVLCSRTTCRAVLNPLCQVDYRA-KLWACNFCYQRN 43 (59)
T ss_dssp CCBCSCTTTCCBCCTTSEEEGGG-TEEECSSSCCEE
T ss_pred CcccCCCCCCeEECCceEEECCC-CEEEcccCCCcC
Confidence 47898766999987775443321 469999998653
No 59
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=68.42 E-value=3.5 Score=30.57 Aligned_cols=28 Identities=32% Similarity=0.636 Sum_probs=23.2
Q ss_pred CcccccccccccCCCCCccCCCCCCCcCc
Q 046120 49 SSSFCHNCFRKTMHSSSSICPSCSVAFCS 77 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~~~~~C~~C~~~yCS 77 (381)
....|..|.+.+.....+.|. |+..||+
T Consensus 24 ~~~rC~~C~kkvgl~~~f~Cr-Cg~~FC~ 51 (85)
T 1wff_A 24 IMKHCFLCGKKTGLATSFECR-CGNNFCA 51 (85)
T ss_dssp CCCBCSSSCCBCSSSSCEECT-TCCEECT
T ss_pred cCccchhhCCeecccCCeEcC-CCCEecc
Confidence 568999999988743478995 9999997
No 60
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=64.65 E-value=4.1 Score=29.35 Aligned_cols=27 Identities=26% Similarity=0.727 Sum_probs=22.8
Q ss_pred CcccccccccccCCCCCccCCCCCCCcCc
Q 046120 49 SSSFCHNCFRKTMHSSSSICPSCSVAFCS 77 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~~~~~C~~C~~~yCS 77 (381)
....|..|-+.+.. ..+.| .|+..||+
T Consensus 24 ~~~RC~~C~kkvgL-~~f~C-rCg~~FCs 50 (74)
T 1wfp_A 24 TATRCLSCNKKVGV-TGFKC-RCGSTFCG 50 (74)
T ss_dssp CCCBCSSSCCBCTT-TCEEC-TTSCEECT
T ss_pred cCccchhhcCcccc-cceEe-ccCCEecc
Confidence 56899999998773 46899 79999997
No 61
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=64.21 E-value=2.3 Score=29.31 Aligned_cols=32 Identities=25% Similarity=0.772 Sum_probs=25.2
Q ss_pred cccccccccccCCCCCccCCCCCCCcCccccch
Q 046120 50 SSFCHNCFRKTMHSSSSICPSCSVAFCSPKCST 82 (381)
Q Consensus 50 ~~~C~~C~~~~~~~~~~~C~~C~~~yCS~~C~~ 82 (381)
...|..|.+.+.....++|++|+..||- +|-.
T Consensus 15 ~~~C~~C~~~~~~~~~y~C~~C~~~FC~-dCD~ 46 (59)
T 1z60_A 15 ERFCYGCQGELKDQHVYVCAVCQNVFCV-DCDV 46 (59)
T ss_dssp CCEETTTTEECTTSEEECCTTTTCCBCH-HHHH
T ss_pred CCcccccCcccCCCccEECCccCcCccc-chhH
Confidence 4579999999864334889999999995 6754
No 62
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=60.80 E-value=2.1 Score=29.31 Aligned_cols=26 Identities=31% Similarity=0.820 Sum_probs=17.7
Q ss_pred ccCCCCcceeeecCCCCCCCCCceeeeCCccCc
Q 046120 334 MCDRDNCWGTLAPLPPSDATPSTVMECNVCGNL 366 (381)
Q Consensus 334 ~C~~~~C~g~~~p~~~~~~~~~~~~~C~~C~~~ 366 (381)
.|.+ |+|.+ |+.+.. ..|.|+.|.+.
T Consensus 35 ~CaR--CGg~v-~lr~~k----~~WvC~lC~k~ 60 (62)
T 2a20_A 35 FCAR--CGGRV-SLRSNK----VMWVCNLCRKQ 60 (62)
T ss_dssp ECTT--SEEEE-ESSTTC----EEEEEHHHHHH
T ss_pred eecc--cCCEe-eecCCe----EEEEehhhhhc
Confidence 3455 77887 464432 68999999764
No 63
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=60.37 E-value=2.5 Score=30.04 Aligned_cols=30 Identities=20% Similarity=0.516 Sum_probs=17.7
Q ss_pred ccccccccccCCCCCccCCCCCCC-cCccccchhhh
Q 046120 51 SFCHNCFRKTMHSSSSICPSCSVA-FCSPKCSTAAA 85 (381)
Q Consensus 51 ~~C~~C~~~~~~~~~~~C~~C~~~-yCS~~C~~~a~ 85 (381)
..|-.|.+++.-... =..+ |||+.|+..+.
T Consensus 10 ~~CP~Cgkp~~W~~~-----~~~rPFCSeRCr~iDL 40 (68)
T 1lv3_A 10 VNCPTCGKTVVWGEI-----SPFRPFCSKRCQLIDL 40 (68)
T ss_dssp EECTTTCCEEECSSS-----SSCCSSSSHHHHHHHH
T ss_pred CcCCCCCCccccccc-----CCCCcccCHHHHhhhH
Confidence 456677666531100 0133 99999998863
No 64
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=60.01 E-value=3.7 Score=28.73 Aligned_cols=27 Identities=22% Similarity=0.734 Sum_probs=22.3
Q ss_pred CcccccccccccCCCCCccCCCCCCCcCc
Q 046120 49 SSSFCHNCFRKTMHSSSSICPSCSVAFCS 77 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~~~~~C~~C~~~yCS 77 (381)
....|..|-+.+.. ..+.| .|+..||+
T Consensus 14 ~~~rC~~C~kkvgl-~~f~C-rCg~~FC~ 40 (64)
T 1wfh_A 14 RPNRCTVCRKRVGL-TGFMC-RCGTTFCG 40 (64)
T ss_dssp SCCCCTTTCCCCCT-TCEEC-SSSCEECT
T ss_pred cCCcChhhCCccCc-cCEEe-ecCCEecc
Confidence 56799999998762 36899 79999997
No 65
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=59.20 E-value=3.9 Score=28.63 Aligned_cols=27 Identities=26% Similarity=0.694 Sum_probs=22.4
Q ss_pred CcccccccccccCCCCCccCCCCCCCcCc
Q 046120 49 SSSFCHNCFRKTMHSSSSICPSCSVAFCS 77 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~~~~~C~~C~~~yCS 77 (381)
....|..|-+.+.. ..+.| .|+..||+
T Consensus 14 ~~~rC~~C~kkvgl-~~f~C-rCg~~FC~ 40 (64)
T 1wg2_A 14 PNNRCFSCNKKVGV-MGFKC-KCGSTFCG 40 (64)
T ss_dssp CSCSCTTTCCCCTT-SCEEC-TTSCEECS
T ss_pred cCCcChhhCCcccc-cCeEe-ecCCEecc
Confidence 56799999998762 36899 89999997
No 66
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.66 E-value=4.6 Score=28.55 Aligned_cols=28 Identities=29% Similarity=0.624 Sum_probs=22.1
Q ss_pred CcccccccccccCCCC--CccCCCCCCCcCc
Q 046120 49 SSSFCHNCFRKTMHSS--SSICPSCSVAFCS 77 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~~--~~~C~~C~~~yCS 77 (381)
....|..|.+.+.... .+.| .|+..||+
T Consensus 14 ~~~rC~~C~kk~gL~~~egf~C-rCg~~FC~ 43 (67)
T 1x4w_A 14 SRRRCFQCQTKLELVQQELGSC-RCGYVFCM 43 (67)
T ss_dssp CTTBCSSSCCBCCHHHHHHHCC-SSSCCCCT
T ss_pred cCCcchhhCCeecccccCceEe-cCCCEehh
Confidence 5679999999876211 2799 99999997
No 67
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=54.99 E-value=4.9 Score=29.40 Aligned_cols=26 Identities=27% Similarity=0.641 Sum_probs=21.5
Q ss_pred CcccccccccccCCCCCccCCCCCCC
Q 046120 49 SSSFCHNCFRKTMHSSSSICPSCSVA 74 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~~~~~C~~C~~~ 74 (381)
....|+.||+........-||+|+..
T Consensus 14 ~iLrC~aCf~~t~~~~k~FCp~CGn~ 39 (79)
T 2con_A 14 YILRCHGCFKTTSDMNRVFCGHCGNK 39 (79)
T ss_dssp EEEECSSSCCEESCSSCCSCSSSCCS
T ss_pred eeeEecccceECCCcccccccccCcc
Confidence 55799999999876667889999875
No 68
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=48.73 E-value=11 Score=30.49 Aligned_cols=32 Identities=22% Similarity=0.635 Sum_probs=22.0
Q ss_pred ccCCCCcceeeecCCCCCCCCCceeeeCCccCccc
Q 046120 334 MCDRDNCWGTLAPLPPSDATPSTVMECNVCGNLKN 368 (381)
Q Consensus 334 ~C~~~~C~g~~~p~~~~~~~~~~~~~C~~C~~~~~ 368 (381)
.||. |+++|.|....+.. ...|.|..|+....
T Consensus 26 FCPe--CgNmL~pked~~~~-~l~~~CrtCgY~~~ 57 (133)
T 3qt1_I 26 FCRD--CNNMLYPREDKENN-RLLFECRTCSYVEE 57 (133)
T ss_dssp BCTT--TCCBCBCCBCTTTC-CBCCBCSSSCCBCC
T ss_pred eCCC--CCCEeeECccCCCc-eeEEECCCCCCcEE
Confidence 4987 88999876422211 24699999998654
No 69
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=48.68 E-value=12 Score=29.26 Aligned_cols=33 Identities=18% Similarity=0.331 Sum_probs=22.9
Q ss_pred ccCCCCcceeeecCCCCCCCCCceeeeCCccCcccc
Q 046120 334 MCDRDNCWGTLAPLPPSDATPSTVMECNVCGNLKND 369 (381)
Q Consensus 334 ~C~~~~C~g~~~p~~~~~~~~~~~~~C~~C~~~~~~ 369 (381)
.||. |++.|.|..+.... ...|.|..|+.....
T Consensus 6 FCp~--Cgn~L~~~~~~~~~-~~~~~C~~C~y~~~~ 38 (113)
T 3h0g_I 6 YCIE--CNNMLYPREDKVDR-VLRLACRNCDYSEIA 38 (113)
T ss_dssp CCSS--SCCCCEECCCTTTC-CCCEECSSSCCEECC
T ss_pred eCcC--CCCEeeEcccCCCC-eeEEECCCCCCeEEc
Confidence 4987 88999876543222 236999999986654
No 70
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=48.18 E-value=5.7 Score=28.60 Aligned_cols=27 Identities=26% Similarity=0.608 Sum_probs=22.0
Q ss_pred CcccccccccccCCCCCccCCCCCCCcCc
Q 046120 49 SSSFCHNCFRKTMHSSSSICPSCSVAFCS 77 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~~~~~C~~C~~~yCS 77 (381)
....|..|-+.+.. ..+.|. |+..||+
T Consensus 24 ~~nRC~~CrKkvgL-~gf~Cr-Cg~~FCs 50 (74)
T 1wfl_A 24 KKNRCFMCRKKVGL-TGFDCR-CGNLFCG 50 (74)
T ss_dssp CTTBCSSSCCBCGG-GCEECT-TSCEECS
T ss_pred cCCcChhhCCcccc-cCeecC-CCCEech
Confidence 45689999998762 358899 9999997
No 71
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=46.21 E-value=7.3 Score=25.94 Aligned_cols=27 Identities=37% Similarity=0.849 Sum_probs=19.9
Q ss_pred HhhhcccCCCCcceeeecCCCCCCCCCceeeeCCccCc
Q 046120 329 FFMRYMCDRDNCWGTLAPLPPSDATPSTVMECNVCGNL 366 (381)
Q Consensus 329 ~~~~~~C~~~~C~g~~~p~~~~~~~~~~~~~C~~C~~~ 366 (381)
.+....|+. |+..+ |. ..|.|.+||.+
T Consensus 11 ~~~k~iCpk--C~a~~-~~--------gaw~CrKCG~~ 37 (51)
T 3j21_g 11 IFKKYVCLR--CGATN-PW--------GAKKCRKCGYK 37 (51)
T ss_dssp SSSEEECTT--TCCEE-CT--------TCSSCSSSSSC
T ss_pred HhCCccCCC--CCCcC-CC--------CceecCCCCCc
Confidence 457788998 76663 22 35999999987
No 72
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.87 E-value=8.5 Score=28.05 Aligned_cols=17 Identities=18% Similarity=0.335 Sum_probs=14.7
Q ss_pred EEEEccCCCCCCeeEEe
Q 046120 237 IVRMIHDVPQGREICLS 253 (381)
Q Consensus 237 ~vrA~r~I~~GeEl~is 253 (381)
.|+|.++|++||.|+..
T Consensus 8 slvA~rdI~~Gevit~~ 24 (79)
T 1wvo_A 8 SVVAKVKIPEGTILTMD 24 (79)
T ss_dssp EEEESSCBCTTCBCCGG
T ss_pred EEEEeCccCCCCCcCHH
Confidence 68899999999988754
No 73
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=42.49 E-value=11 Score=27.82 Aligned_cols=48 Identities=21% Similarity=0.608 Sum_probs=32.7
Q ss_pred ccccccccC---CCCCccCCCCCCCcCccccchhhhhcCCchhhhHhHHHhhh
Q 046120 53 CHNCFRKTM---HSSSSICPSCSVAFCSPKCSTAAASSSHSPYVCQALTRLLN 102 (381)
Q Consensus 53 C~~C~~~~~---~~~~~~C~~C~~~yCS~~C~~~a~~~~H~~~EC~~l~~~~~ 102 (381)
|..|-..+. ....+.|+.|+..||. .|... |...|...-|..++.|..
T Consensus 28 CP~C~~~~~~~~~~~~v~C~~C~~~FC~-~C~~~-w~~~H~~~sC~~~~~w~~ 78 (86)
T 2ct7_A 28 CAQCSFGFIYEREQLEATCPQCHQTFCV-RCKRQ-WEEQHRGRSCEDFQNWKR 78 (86)
T ss_dssp CSSSCCCEECCCSCSCEECTTTCCEECS-SSCSB-CCTTTTTSCHHHHHHHHH
T ss_pred CcCCCchheecCCCCceEeCCCCCcccc-ccCCc-hhhcCCCCChHHHHHHHH
Confidence 556654332 1235789999999995 89853 334497777999988844
No 74
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=42.26 E-value=9.4 Score=36.10 Aligned_cols=22 Identities=27% Similarity=0.496 Sum_probs=18.5
Q ss_pred CCccEEEEcccCCCCcEEEEcC
Q 046120 15 GRGRGLVSTQSLKAGQIVLRDS 36 (381)
Q Consensus 15 ~~GRglvAtrdi~~GevIl~e~ 36 (381)
...|.|||++||++||+|=.+.
T Consensus 277 ~~rrSlva~~di~~Ge~lt~~n 298 (350)
T 3g8r_A 277 SLRRGVFATRPVAAGEALTADN 298 (350)
T ss_dssp TTSCEEEESSCBCTTCBCBTTB
T ss_pred ccceEEEEccccCCCCCccHHH
Confidence 3589999999999999986554
No 75
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=41.32 E-value=9.5 Score=28.47 Aligned_cols=33 Identities=27% Similarity=0.705 Sum_probs=24.9
Q ss_pred CcccccccccccCCC-CCccCCCCCCCcCccccch
Q 046120 49 SSSFCHNCFRKTMHS-SSSICPSCSVAFCSPKCST 82 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~-~~~~C~~C~~~yCS~~C~~ 82 (381)
....|..|.+.+... ....|..|+.+||+ .|..
T Consensus 19 ~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~-~Cs~ 52 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFTKRRHHCRACGKVFCG-VCCN 52 (90)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECG-GGSC
T ss_pred cCCcCcCCCCcccchhhCccccCCCCEECC-cccC
Confidence 567899999877632 24679999999997 5643
No 76
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=38.08 E-value=7.7 Score=25.60 Aligned_cols=30 Identities=23% Similarity=0.369 Sum_probs=19.4
Q ss_pred cccccccccccCCCCCccCCCCCCCcCccccchh
Q 046120 50 SSFCHNCFRKTMHSSSSICPSCSVAFCSPKCSTA 83 (381)
Q Consensus 50 ~~~C~~C~~~~~~~~~~~C~~C~~~yCS~~C~~~ 83 (381)
..+|.+|.+.+...... =...|||..|+++
T Consensus 18 ~~~C~~CG~~i~~~~~~----r~krFCS~sCR~~ 47 (49)
T 2l8e_A 18 LLKCEYCGKYAPAEQFR----GSKRFCSMTCAKR 47 (49)
T ss_dssp EEECTTTCCEEEGGGCT----TTSSSCSHHHHHH
T ss_pred CCcChhccCccccccCC----CCCccCCHHHHhh
Confidence 35799999987732110 0123999999864
No 77
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=36.41 E-value=12 Score=26.22 Aligned_cols=32 Identities=28% Similarity=0.649 Sum_probs=22.1
Q ss_pred HhhhcccCCCCccee--eecCCCCCCCCCceeeeCCccCccc
Q 046120 329 FFMRYMCDRDNCWGT--LAPLPPSDATPSTVMECNVCGNLKN 368 (381)
Q Consensus 329 ~~~~~~C~~~~C~g~--~~p~~~~~~~~~~~~~C~~C~~~~~ 368 (381)
+|+.++|+. |... +. ..+ ++...|..||.+.-
T Consensus 4 ~Fm~VKCp~--C~niq~VF-ShA-----~tvV~C~~Cg~~L~ 37 (66)
T 1qxf_A 4 RFVKVKCPD--CEHEQVIF-DHP-----STIVKCIICGRTVA 37 (66)
T ss_dssp CEEEEECTT--TCCEEEEE-SSC-----SSCEECSSSCCEEE
T ss_pred eeEEEECCC--CCCceEEE-ecC-----ceEEEcccCCCEEe
Confidence 679999997 7533 33 221 25689999998763
No 78
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=35.29 E-value=14 Score=35.01 Aligned_cols=21 Identities=19% Similarity=0.371 Sum_probs=18.0
Q ss_pred CccEEEEcccCCCCcEEEEcC
Q 046120 16 RGRGLVSTQSLKAGQIVLRDS 36 (381)
Q Consensus 16 ~GRglvAtrdi~~GevIl~e~ 36 (381)
..|.|||++||++||+|=.+.
T Consensus 289 ~rrsl~a~~di~~Ge~~t~~n 309 (349)
T 2wqp_A 289 AFASVVADKDIKKGELLSGDN 309 (349)
T ss_dssp HSCEEEESSCBCTTCBCCTTT
T ss_pred heeEEEEccccCCCCEecHHH
Confidence 479999999999999986554
No 79
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=34.78 E-value=14 Score=35.29 Aligned_cols=21 Identities=24% Similarity=0.464 Sum_probs=18.1
Q ss_pred CccEEEEcccCCCCcEEEEcC
Q 046120 16 RGRGLVSTQSLKAGQIVLRDS 36 (381)
Q Consensus 16 ~GRglvAtrdi~~GevIl~e~ 36 (381)
..|.|||++||++||+|=.+.
T Consensus 314 ~rrSlva~~di~~Ge~it~~n 334 (385)
T 1vli_A 314 AYRGIFTTAPIQKGEAFSEDN 334 (385)
T ss_dssp TSCEEEESSCBCTTCBCCTTT
T ss_pred heeEEEEccccCCCCEecHHH
Confidence 589999999999999986554
No 80
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=34.06 E-value=15 Score=32.85 Aligned_cols=28 Identities=21% Similarity=0.635 Sum_probs=22.7
Q ss_pred CcccccccccccCC---------CCCccCCCCCCC-cC
Q 046120 49 SSSFCHNCFRKTMH---------SSSSICPSCSVA-FC 76 (381)
Q Consensus 49 ~~~~C~~C~~~~~~---------~~~~~C~~C~~~-yC 76 (381)
...+|.+|+-.+++ ...+.||.|+.. |=
T Consensus 197 ~~~~C~GC~~~lppq~~~~i~~~~~Iv~Cp~CgRIL~~ 234 (256)
T 3na7_A 197 KKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYA 234 (256)
T ss_dssp BTTBCTTTCCBCCHHHHHHHHHSSSCEECTTTCCEEEC
T ss_pred eCCccCCCCeeeCHHHHHHHHCCCCEEECCCCCeeEEe
Confidence 56799999999884 246899999998 64
No 81
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=32.94 E-value=22 Score=25.59 Aligned_cols=27 Identities=26% Similarity=0.730 Sum_probs=22.4
Q ss_pred Ccccccc--cccccCCCCCccCCCCCCCcCc
Q 046120 49 SSSFCHN--CFRKTMHSSSSICPSCSVAFCS 77 (381)
Q Consensus 49 ~~~~C~~--C~~~~~~~~~~~C~~C~~~yCS 77 (381)
...+|.. |-+.-. .++.|..|+..||+
T Consensus 13 ~g~~Cs~~~C~~~df--lpf~C~~C~~~FC~ 41 (75)
T 1wys_A 13 IGQHCQVQHCRQRDF--LPFVCDGCSGIFCL 41 (75)
T ss_dssp CCCCCSCTTTCCCSC--CCEECTTTCCEECS
T ss_pred cCCCcCcccCCCccc--eeeECcccCcCcCc
Confidence 5779998 987633 57899999999996
No 82
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=32.49 E-value=18 Score=29.80 Aligned_cols=23 Identities=9% Similarity=0.083 Sum_probs=18.6
Q ss_pred ceEEEEeCCCccEEEEcccCCCCcEE
Q 046120 7 TVTVAEIEGRGRGLVSTQSLKAGQIV 32 (381)
Q Consensus 7 ~i~v~~~~~~GRglvAtrdi~~GevI 32 (381)
.++|+. .|.||+|++.|++|+.+
T Consensus 24 ~L~i~~---~g~GVfA~~~IpkGt~f 46 (152)
T 3ihx_A 24 VLYIDR---FLGGVFSKRRIPKRTQF 46 (152)
T ss_dssp TEEECT---TTCSEEESSCBCSSCEE
T ss_pred ceEEee---cCCeEEECceecCCCEE
Confidence 455543 58999999999999975
No 83
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=32.45 E-value=20 Score=26.21 Aligned_cols=32 Identities=22% Similarity=0.639 Sum_probs=24.9
Q ss_pred CcccccccccccCCC-CCccCCCCCCCcCccccc
Q 046120 49 SSSFCHNCFRKTMHS-SSSICPSCSVAFCSPKCS 81 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~-~~~~C~~C~~~yCS~~C~ 81 (381)
....|..|.+.+... ....|..|+.+||+ .|.
T Consensus 20 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~-~Cs 52 (84)
T 1z2q_A 20 DAPACNGCGCVFTTTVRRHHCRNCGYVLCG-DCS 52 (84)
T ss_dssp TCCBCTTTCCBCCTTSCCEECTTTCCEECT-GGG
T ss_pred CCCCCcCcCCccccchhcccccCCCcEECh-HHh
Confidence 678999999987632 24679999999997 564
No 84
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=31.76 E-value=19 Score=31.75 Aligned_cols=20 Identities=25% Similarity=0.305 Sum_probs=16.3
Q ss_pred cEEEEcccCCCCcEEEEcCc
Q 046120 18 RGLVSTQSLKAGQIVLRDSP 37 (381)
Q Consensus 18 RglvAtrdi~~GevIl~e~P 37 (381)
-++||+|||++||-|...--
T Consensus 190 i~~~A~RdI~~GEELT~dY~ 209 (232)
T 3ooi_A 190 VGLFALSDIKAGTELTFNYN 209 (232)
T ss_dssp EEEEESSCBCTTCBCEECCT
T ss_pred EEEEECCccCCCCEEEEECC
Confidence 45799999999999876553
No 85
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=31.64 E-value=17 Score=25.29 Aligned_cols=34 Identities=26% Similarity=0.480 Sum_probs=22.8
Q ss_pred hHhhhcccCCCCcceee-ecCCCCCCCCCceeeeCCccCccc
Q 046120 328 YFFMRYMCDRDNCWGTL-APLPPSDATPSTVMECNVCGNLKN 368 (381)
Q Consensus 328 ~~~~~~~C~~~~C~g~~-~p~~~~~~~~~~~~~C~~C~~~~~ 368 (381)
.+|+.++|+. |...- +-..+ ++...|..||.+.-
T Consensus 11 S~Fm~VkCp~--C~~~q~VFSha-----~t~V~C~~Cgt~L~ 45 (63)
T 3j20_W 11 SRFLRVKCID--CGNEQIVFSHP-----ATKVRCLICGATLV 45 (63)
T ss_dssp CCEEEEECSS--SCCEEEEESSC-----SSCEECSSSCCEEE
T ss_pred CcEEEEECCC--CCCeeEEEecC-----CeEEEccCcCCEEe
Confidence 4789999997 75332 21222 25689999998764
No 86
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=29.74 E-value=29 Score=27.49 Aligned_cols=32 Identities=25% Similarity=0.640 Sum_probs=24.8
Q ss_pred CcccccccccccCCC-CCccCCCCCCCcCccccc
Q 046120 49 SSSFCHNCFRKTMHS-SSSICPSCSVAFCSPKCS 81 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~-~~~~C~~C~~~yCS~~C~ 81 (381)
....|..|.+.+... ....|..|+.+||+ .|.
T Consensus 68 ~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~-~Cs 100 (125)
T 1joc_A 68 EVQNCMACGKGFSVTVRRHHCRQCGNIFCA-ECS 100 (125)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECG-GGS
T ss_pred CCCCCcCcCCccccccccccCCCCCeEECh-HHh
Confidence 567899999987622 24589999999997 564
No 87
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=28.57 E-value=37 Score=24.20 Aligned_cols=35 Identities=17% Similarity=0.362 Sum_probs=22.7
Q ss_pred hhhcccCCCCccee-eecCCCCCCCCCceeeeCCccCcccccCc
Q 046120 330 FMRYMCDRDNCWGT-LAPLPPSDATPSTVMECNVCGNLKNDAIG 372 (381)
Q Consensus 330 ~~~~~C~~~~C~g~-~~p~~~~~~~~~~~~~C~~C~~~~~~~~~ 372 (381)
-.+|.|+. |+.. |-.. . -..|.|..|++++..-..
T Consensus 24 ~~ky~C~f--Cgk~~vkR~---a---~GIW~C~~C~~~~AGGAy 59 (72)
T 3jyw_9 24 HARYDCSF--CGKKTVKRG---A---AGIWTCSCCKKTVAGGAY 59 (72)
T ss_dssp HSCBCCSS--CCSSCBSBC---S---SSCBCCSSSCCCCCCSSS
T ss_pred ccCccCCC--CCCceeEec---C---CCeEECCCCCCEEeCCcc
Confidence 46789998 6533 3221 1 147999999998765433
No 88
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=28.48 E-value=21 Score=37.44 Aligned_cols=36 Identities=19% Similarity=0.495 Sum_probs=25.4
Q ss_pred hcccCCCCcceeeecCCCCCCCCCceeeeCCccCccc
Q 046120 332 RYMCDRDNCWGTLAPLPPSDATPSTVMECNVCGNLKN 368 (381)
Q Consensus 332 ~~~C~~~~C~g~~~p~~~~~~~~~~~~~C~~C~~~~~ 368 (381)
-.+|.+.+|.+++-|.-.-+... ..|+|+.|+....
T Consensus 53 pvRC~~~~CrayiNPf~~~~~~~-~~W~C~~C~~~N~ 88 (768)
T 1m2o_A 53 PVVCSGPHCKSILNPYCVIDPRN-SSWSCPICNSRNH 88 (768)
T ss_dssp CCBCCSTTTCCBCCTTSCEETTT-TEECCTTTCCCCB
T ss_pred CCccCCCCCCeEECCceEEeCCC-CEEEcccCCCCCC
Confidence 37897656999987775443322 4799999997643
No 89
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=28.34 E-value=27 Score=24.22 Aligned_cols=31 Identities=26% Similarity=0.658 Sum_probs=20.4
Q ss_pred hhhcccCCCCcceeeecCCCCCCCCCceeeeCCccCccc
Q 046120 330 FMRYMCDRDNCWGTLAPLPPSDATPSTVMECNVCGNLKN 368 (381)
Q Consensus 330 ~~~~~C~~~~C~g~~~p~~~~~~~~~~~~~C~~C~~~~~ 368 (381)
-+.|+|.+ |+..+ .+.+.+ ..+|..||..+=
T Consensus 19 ~v~Y~C~~--Cg~~~-~l~~~~-----~iRC~~CG~RIL 49 (63)
T 3h0g_L 19 TMIYLCAD--CGARN-TIQAKE-----VIRCRECGHRVM 49 (63)
T ss_dssp CCCCBCSS--SCCBC-CCCSSS-----CCCCSSSCCCCC
T ss_pred CeEEECCC--CCCee-ecCCCC-----ceECCCCCcEEE
Confidence 47799997 74443 343332 489999997653
No 90
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=28.17 E-value=30 Score=24.54 Aligned_cols=25 Identities=20% Similarity=0.525 Sum_probs=18.5
Q ss_pred CcccccccccccC--CCCCccCCCCCC
Q 046120 49 SSSFCHNCFRKTM--HSSSSICPSCSV 73 (381)
Q Consensus 49 ~~~~C~~C~~~~~--~~~~~~C~~C~~ 73 (381)
....|..|...+. ....++|+.|+.
T Consensus 27 v~Y~C~~CG~~~e~~~~d~irCp~CG~ 53 (70)
T 1twf_L 27 LKYICAECSSKLSLSRTDAVRCKDCGH 53 (70)
T ss_dssp CCEECSSSCCEECCCTTSTTCCSSSCC
T ss_pred EEEECCCCCCcceeCCCCCccCCCCCc
Confidence 4458999998843 345789999887
No 91
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.97 E-value=32 Score=23.89 Aligned_cols=27 Identities=26% Similarity=0.672 Sum_probs=21.5
Q ss_pred Ccccccc--cccccCCCCCccCCCCCCCcCc
Q 046120 49 SSSFCHN--CFRKTMHSSSSICPSCSVAFCS 77 (381)
Q Consensus 49 ~~~~C~~--C~~~~~~~~~~~C~~C~~~yCS 77 (381)
....|.. |-+.. ..++.|..|+..||.
T Consensus 11 ~~~~Cs~~~Ck~~~--ll~f~C~~C~~~FC~ 39 (63)
T 1x4v_A 11 FTNKCERAGCRQRE--MMKLTCERCSRNFCI 39 (63)
T ss_dssp TCCCCCSTTCCCCC--SSCCBCSSSCCBCCH
T ss_pred cCCCCCccCCCCCC--ccceECCCCCcccCc
Confidence 4678888 98763 257899999999996
No 92
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=27.13 E-value=36 Score=24.68 Aligned_cols=33 Identities=27% Similarity=0.770 Sum_probs=25.0
Q ss_pred CcccccccccccCCC-CCccCCCCCCCcCccccch
Q 046120 49 SSSFCHNCFRKTMHS-SSSICPSCSVAFCSPKCST 82 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~-~~~~C~~C~~~yCS~~C~~ 82 (381)
....|..|.+.+... ....|..|+.+||+ .|..
T Consensus 18 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~-~Cs~ 51 (82)
T 2yw8_A 18 EATHCRQCEKEFSISRRKHHCRNCGHIFCN-TCSS 51 (82)
T ss_dssp CCCBCTTTCCBCBTTBCCEECTTTCCEECS-GGGC
T ss_pred cCCcccCcCCcccCccccccCCCCCCEECh-HHhC
Confidence 567899999987621 24579999999997 5653
No 93
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=26.95 E-value=14 Score=29.26 Aligned_cols=33 Identities=21% Similarity=0.597 Sum_probs=21.6
Q ss_pred cccCCCCcceeeecCCCCCCCCCceeeeCCccCccc
Q 046120 333 YMCDRDNCWGTLAPLPPSDATPSTVMECNVCGNLKN 368 (381)
Q Consensus 333 ~~C~~~~C~g~~~p~~~~~~~~~~~~~C~~C~~~~~ 368 (381)
..||. |+.+|.|....... ...|.|..||....
T Consensus 5 ~FCp~--CgnlL~~~~~~~~~-~~~~~C~~C~y~~~ 37 (122)
T 1twf_I 5 RFCRD--CNNMLYPREDKENN-RLLFECRTCSYVEE 37 (122)
T ss_dssp CBCSS--SCCBCEEEEETTTT-EEEEECSSSSCEEE
T ss_pred Ccccc--cCccCcccccCcCC-CCEEECCcCCCeee
Confidence 46987 88888755321111 24699999998655
No 94
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=26.67 E-value=22 Score=37.38 Aligned_cols=35 Identities=29% Similarity=0.620 Sum_probs=24.7
Q ss_pred hcccCCCCcceeeecCCCCCCCCCceeeeCCccCcc
Q 046120 332 RYMCDRDNCWGTLAPLPPSDATPSTVMECNVCGNLK 367 (381)
Q Consensus 332 ~~~C~~~~C~g~~~p~~~~~~~~~~~~~C~~C~~~~ 367 (381)
-.+|.+.+|.+++-|.-.-+... ..|+|+.|+...
T Consensus 62 pvRC~~~~CrayiNPf~~~~~~~-~~W~C~~C~~~N 96 (769)
T 2nut_A 62 PVLCSRTTCRAVLNPLCQVDYRA-KLWACNFCYQRN 96 (769)
T ss_dssp CCBCSSTTCCCBCCTTSEEETTT-TEEECSSSCCEE
T ss_pred CCcCCCCCCCeEECCceEEeCCC-CEEEccCCCCCC
Confidence 37898656999987764433222 479999999764
No 95
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.98 E-value=37 Score=24.71 Aligned_cols=32 Identities=25% Similarity=0.667 Sum_probs=24.5
Q ss_pred CcccccccccccCCC-CCccCCCCCCCcCccccc
Q 046120 49 SSSFCHNCFRKTMHS-SSSICPSCSVAFCSPKCS 81 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~-~~~~C~~C~~~yCS~~C~ 81 (381)
....|..|.+.+... ....|..|+.+||+ .|-
T Consensus 13 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~-~Cs 45 (84)
T 1x4u_A 13 NFGNCTGCSATFSVLKKRRSCSNCGNSFCS-RCC 45 (84)
T ss_dssp CCSSCSSSCCCCCSSSCCEECSSSCCEECT-TTS
T ss_pred CCCcCcCcCCccccchhhhhhcCCCcEECh-hhc
Confidence 667999999987521 24579999999997 564
No 96
>2xzm_6 RPS27E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_6
Probab=24.48 E-value=27 Score=25.52 Aligned_cols=33 Identities=18% Similarity=0.541 Sum_probs=22.7
Q ss_pred hHhhhcccCCCCccee--eecCCCCCCCCCceeeeCCccCccc
Q 046120 328 YFFMRYMCDRDNCWGT--LAPLPPSDATPSTVMECNVCGNLKN 368 (381)
Q Consensus 328 ~~~~~~~C~~~~C~g~--~~p~~~~~~~~~~~~~C~~C~~~~~ 368 (381)
.+|+.++|+. |... +. ..+ ++...|..||.+.-
T Consensus 28 S~Fm~VkCp~--C~n~q~VF-ShA-----~t~V~C~~Cg~~L~ 62 (81)
T 2xzm_6 28 SYFMDVKCAQ--CQNIQMIF-SNA-----QSTIICEKCSAILC 62 (81)
T ss_dssp CCEEEEECSS--SCCEEEEE-TTC-----SSCEECSSSCCEEE
T ss_pred CcEEEeECCC--CCCeeEEE-ecC-----ccEEEccCCCCEEe
Confidence 4779999997 7543 32 221 25789999998753
No 97
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=23.45 E-value=47 Score=21.56 Aligned_cols=24 Identities=21% Similarity=0.646 Sum_probs=16.9
Q ss_pred ccccccccccCCC-----CCccCCCCCCC
Q 046120 51 SFCHNCFRKTMHS-----SSSICPSCSVA 74 (381)
Q Consensus 51 ~~C~~C~~~~~~~-----~~~~C~~C~~~ 74 (381)
-.|..|.+.+... +.++||-|++.
T Consensus 4 Y~C~rCg~~fs~~el~~lP~IrCpyCGyr 32 (48)
T 4ayb_P 4 YRCGKCWKTFTDEQLKVLPGVRCPYCGYK 32 (48)
T ss_dssp -CCCCTTTTCCCCCSCCCSSSCCTTTCCS
T ss_pred EEeeccCCCccHHHHhhCCCcccCccCcE
Confidence 4688888877643 35789988874
No 98
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=23.31 E-value=62 Score=28.65 Aligned_cols=28 Identities=11% Similarity=0.137 Sum_probs=23.5
Q ss_pred CceEEEEeCCCccEEEEc-ccCCCCcEEE
Q 046120 6 ETVTVAEIEGRGRGLVST-QSLKAGQIVL 33 (381)
Q Consensus 6 ~~i~v~~~~~~GRglvAt-rdi~~GevIl 33 (381)
..++|+.+...|.||++. +.|++|+.+-
T Consensus 72 ~~L~vr~S~i~~~Gv~~~~~~IpkGt~fG 100 (237)
T 3ray_A 72 QGMEVVKDTSGESDVRCVNEVIPKGHIFG 100 (237)
T ss_dssp TTEEEEECTTSCEEEEECSSCBCTTEEEC
T ss_pred CCeEEEEcCCCCcceEEEeCcCCCCCEEE
Confidence 568999998888999876 8999998763
No 99
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=23.11 E-value=44 Score=26.10 Aligned_cols=34 Identities=12% Similarity=0.279 Sum_probs=23.3
Q ss_pred HhhhcccCCCCcce-eeecCCCCCCCCCceeeeCCccCccccc
Q 046120 329 FFMRYMCDRDNCWG-TLAPLPPSDATPSTVMECNVCGNLKNDA 370 (381)
Q Consensus 329 ~~~~~~C~~~~C~g-~~~p~~~~~~~~~~~~~C~~C~~~~~~~ 370 (381)
.-.+|.||. |+. .+..... ..|.|..|++++..-
T Consensus 57 q~akytCPf--CGk~~vKR~av------GIW~C~~Cgk~fAGG 91 (116)
T 3cc2_Z 57 MNEDHACPN--CGEDRVDRQGT------GIWQCSYCDYKFTGG 91 (116)
T ss_dssp HHSCEECSS--SCCEEEEEEET------TEEEETTTCCEEECC
T ss_pred hccCCcCCC--CCCceeEecCc------eeEECCCCCCEEECC
Confidence 347799998 754 4443321 479999999986554
No 100
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=22.53 E-value=26 Score=37.00 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=23.1
Q ss_pred cccCCCCcceeeecCCCCCCCCCceeeeCCccCcc
Q 046120 333 YMCDRDNCWGTLAPLPPSDATPSTVMECNVCGNLK 367 (381)
Q Consensus 333 ~~C~~~~C~g~~~p~~~~~~~~~~~~~C~~C~~~~ 367 (381)
.+|.+ |.+++-|.-..+... ..|+|+.|+..-
T Consensus 113 vRC~~--CrayiNPf~~~~~~g-~~W~C~~C~~~N 144 (810)
T 1pcx_A 113 VRCRR--CRSYMNPFVTFIEQG-RRWRCNFCRLAN 144 (810)
T ss_dssp CBCTT--TCCBCCTTCEEETTT-TEEECTTTCCEE
T ss_pred CccCC--ccCEecCceEEeCCC-CEEEccCCCCcC
Confidence 68987 999987764433322 479999999764
No 101
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=22.15 E-value=23 Score=26.02 Aligned_cols=34 Identities=15% Similarity=0.415 Sum_probs=22.2
Q ss_pred hhhcccCCCCccee-eecCCCCCCCCCceeeeCCccCcccccC
Q 046120 330 FMRYMCDRDNCWGT-LAPLPPSDATPSTVMECNVCGNLKNDAI 371 (381)
Q Consensus 330 ~~~~~C~~~~C~g~-~~p~~~~~~~~~~~~~C~~C~~~~~~~~ 371 (381)
-.+|.||. |+.. |-... -..|.|..|++++..-.
T Consensus 33 ~~ky~Cpf--CGk~~vkR~a------~GIW~C~kCg~~~AGGA 67 (83)
T 3j21_i 33 RQKHTCPV--CGRKAVKRIS------TGIWQCQKCGATFAGGA 67 (83)
T ss_dssp HSCBCCSS--SCSSCEEEEE------TTEEEETTTCCEEECCS
T ss_pred hcccCCCC--CCCceeEecC------cCeEEcCCCCCEEeCCc
Confidence 46789998 6533 33221 14799999999875543
No 102
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=21.67 E-value=28 Score=24.94 Aligned_cols=35 Identities=17% Similarity=0.399 Sum_probs=20.6
Q ss_pred CcccccccccccCCC--CCccCCCCCCCcCccccchhhh
Q 046120 49 SSSFCHNCFRKTMHS--SSSICPSCSVAFCSPKCSTAAA 85 (381)
Q Consensus 49 ~~~~C~~C~~~~~~~--~~~~C~~C~~~yCS~~C~~~a~ 85 (381)
....|.-|+.++... ...+| .|+..|| ..|....|
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~-~CGH~fC-~~Cl~~~~ 46 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPC-TCGYQIC-RFCWHRIR 46 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSS-TTSCCCC-HHHHHHHT
T ss_pred cCCcCCccCccCcccccccccc-CCCCCcC-HHHHHHHH
Confidence 345677777766421 22344 5777788 46776665
No 103
>3k3s_A Altronate hydrolase; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 2.15A {Shigella flexneri 2a str}
Probab=21.58 E-value=46 Score=25.56 Aligned_cols=19 Identities=21% Similarity=0.343 Sum_probs=13.3
Q ss_pred EEEcccCCCCcEEEEc-Ccc
Q 046120 20 LVSTQSLKAGQIVLRD-SPI 38 (381)
Q Consensus 20 lvAtrdi~~GevIl~e-~P~ 38 (381)
=||.+||++||.|++= .|+
T Consensus 64 KiAl~dI~~Ge~ViKYG~~I 83 (105)
T 3k3s_A 64 KFALTDIAKGANVIKYGLPI 83 (105)
T ss_dssp EEESSCBCTTCEEEETTEEE
T ss_pred EEEEcccCCCCeEEECCcee
Confidence 3778888888888774 443
No 104
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.56 E-value=60 Score=21.25 Aligned_cols=26 Identities=27% Similarity=0.580 Sum_probs=16.5
Q ss_pred cccCCCCcce--eeecCCCCCCCCCceeeeCCccCcc
Q 046120 333 YMCDRDNCWG--TLAPLPPSDATPSTVMECNVCGNLK 367 (381)
Q Consensus 333 ~~C~~~~C~g--~~~p~~~~~~~~~~~~~C~~C~~~~ 367 (381)
-.||+ |+. .+.+- . .-|.|..||.+.
T Consensus 20 k~CP~--CG~~~fm~~~---~----~R~~C~kCG~t~ 47 (50)
T 3j20_Y 20 KFCPR--CGPGVFMADH---G----DRWACGKCGYTE 47 (50)
T ss_dssp EECSS--SCSSCEEEEC---S----SEEECSSSCCEE
T ss_pred ccCCC--CCCceEEecC---C----CeEECCCCCCEE
Confidence 34997 764 44422 1 259999999763
No 105
>3iz6_X 40S ribosomal protein S27 (S27E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=21.34 E-value=31 Score=25.43 Aligned_cols=35 Identities=26% Similarity=0.524 Sum_probs=22.8
Q ss_pred hHhhhcccCCCCcceee-ecCCCCCCCCCceeeeCCccCcccc
Q 046120 328 YFFMRYMCDRDNCWGTL-APLPPSDATPSTVMECNVCGNLKND 369 (381)
Q Consensus 328 ~~~~~~~C~~~~C~g~~-~p~~~~~~~~~~~~~C~~C~~~~~~ 369 (381)
.+|+.++|+. |...- +-..+ ++...|..||.+.-.
T Consensus 32 S~Fm~VkCp~--C~~~~~VFShA-----~t~V~C~~CgtvL~~ 67 (86)
T 3iz6_X 32 SFFMDVKCQG--CFNITTVFSHS-----QTVVVCPGCQTVLCQ 67 (86)
T ss_dssp -CEEEEECTT--TCCEEEEETTC-----SSCCCCSSSCCCCSC
T ss_pred CcEeEEECCC--CCCeeEEEecC-----CcEEEccCCCCEeec
Confidence 5789999997 76432 21222 256889999987653
No 106
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=21.28 E-value=41 Score=21.73 Aligned_cols=32 Identities=34% Similarity=0.724 Sum_probs=18.0
Q ss_pred hhcccCCCCcceeee-cC--CCC--CCCCCceeeeCCccCc
Q 046120 331 MRYMCDRDNCWGTLA-PL--PPS--DATPSTVMECNVCGNL 366 (381)
Q Consensus 331 ~~~~C~~~~C~g~~~-p~--~~~--~~~~~~~~~C~~C~~~ 366 (381)
.+|+|.. | |++. |. .|+ +..+ -+|.|..||..
T Consensus 3 ~~y~C~v--C-Gyvyd~~~Gd~t~f~~lP-~dw~CP~Cg~~ 39 (46)
T 6rxn_A 3 QKYVCNV--C-GYEYDPAEHDNVPFDQLP-DDWCCPVCGVS 39 (46)
T ss_dssp CCEEETT--T-CCEECGGGGTTCCGGGSC-TTCBCTTTCCB
T ss_pred CEEECCC--C-CeEEeCCcCCCcchhhCC-CCCcCcCCCCc
Confidence 5688986 7 4543 21 100 0111 25999999975
No 107
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=21.10 E-value=30 Score=37.16 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=23.2
Q ss_pred cccCCCCcceeeecCCCCCCCCCceeeeCCccCcc
Q 046120 333 YMCDRDNCWGTLAPLPPSDATPSTVMECNVCGNLK 367 (381)
Q Consensus 333 ~~C~~~~C~g~~~p~~~~~~~~~~~~~C~~C~~~~ 367 (381)
.+|.+ |.+++-|.-..+... ..|+|+.|+..-
T Consensus 229 vRC~r--CrAYiNPf~~~~~~g-~~W~CnfC~~~N 260 (926)
T 1m2v_B 229 VRCRR--CRSYMNPFVTFIEQG-RRWRCNFCRLAN 260 (926)
T ss_dssp CBCSS--SCCBCCTTCEEETTT-TEEECTTTCCEE
T ss_pred CccCC--ccCEecCceEEeCCC-CEEEccCCCCCC
Confidence 78987 999987764433322 479999999764
No 108
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=20.38 E-value=34 Score=24.47 Aligned_cols=34 Identities=21% Similarity=0.419 Sum_probs=22.5
Q ss_pred hhhcccCCCCcce-eeecCCCCCCCCCceeeeCCccCcccccC
Q 046120 330 FMRYMCDRDNCWG-TLAPLPPSDATPSTVMECNVCGNLKNDAI 371 (381)
Q Consensus 330 ~~~~~C~~~~C~g-~~~p~~~~~~~~~~~~~C~~C~~~~~~~~ 371 (381)
-.+|.|+. |+. .|...- ...|.|..|+++...-.
T Consensus 25 ~~ky~C~f--Cgk~~vkR~a------~GIW~C~~C~~~~AGGA 59 (73)
T 1ffk_W 25 KKKYKCPV--CGFPKLKRAS------TSIWVCGHCGYKIAGGA 59 (73)
T ss_pred ccCccCCC--CCCceeEEEE------eEEEECCCCCcEEECCC
Confidence 36789998 653 443331 14699999999866543
Done!