BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046121
(315 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 221 bits (563), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 185/300 (61%), Gaps = 7/300 (2%)
Query: 4 ELYMKDPMKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGF 63
E+++ +FS E+Q A+ +FS +N+LG GGFG VYKG L DG ++A K KE QG
Sbjct: 19 EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGG 78
Query: 64 A-EFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTES--VLEW 120
+FQ+EV +++ A H+N++ L GFC +LVY Y+ N S+ L + ES L+W
Sbjct: 79 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDW 138
Query: 121 HQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP 180
+R A+G+A+GL +LH+ C IIHRD++ +NILL +F ++GDFGLA+ D
Sbjct: 139 PKRQRIALGSARGLAYLHDHC-DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 197
Query: 181 -VQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN--GEEPQQSLR 237
V + GT+G++APEY G S +TDV+ +G++LL+L++G++ D+ + L
Sbjct: 198 HVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 257
Query: 238 QWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
W + L+++ L L+D ++ +Y E+ + + A LC Q +P RP M EVVR+LEG+
Sbjct: 258 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 184/300 (61%), Gaps = 7/300 (2%)
Query: 4 ELYMKDPMKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGF 63
E+++ +FS E+Q A+ +F +N+LG GGFG VYKG L DG ++A K KE TQG
Sbjct: 11 EVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGG 70
Query: 64 A-EFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTES--VLEW 120
+FQ+EV +++ A H+N++ L GFC +LVY Y+ N S+ L + ES L+W
Sbjct: 71 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDW 130
Query: 121 HQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP 180
+R A+G+A+GL +LH+ C IIHRD++ +NILL +F ++GDFGLA+ D
Sbjct: 131 PKRQRIALGSARGLAYLHDHC-DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 189
Query: 181 -VQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN--GEEPQQSLR 237
V + G +G++APEY G S +TDV+ +G++LL+L++G++ D+ + L
Sbjct: 190 HVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
Query: 238 QWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
W + L+++ L L+D ++ +Y E+ + + A LC Q +P RP M EVVR+LEG+
Sbjct: 250 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 185 bits (469), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 163/283 (57%), Gaps = 8/283 (2%)
Query: 17 EIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFA 76
++++AT +F + L+G G FG VYKG L+DG +A K R S+QG EF++E+ L+F
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLF--DNTESVLEWHQRYAAAIGTAKGL 134
RH ++V L+GFC + N IL+Y+Y+ N +L HL+ D + W QR IG A+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 135 RFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTK--ILGTLGYL 192
+LH IIHRD++ NILL +FVP + DFG+++ T D + GTLGY+
Sbjct: 153 HYLHTRA----IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 193 APEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHEL 252
PEY G ++ ++DVY+FG++L +++ R + + +L +WA L ++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 253 IDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+DP + + L TA C+ + E RPSMG+V+ LE
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 163/283 (57%), Gaps = 8/283 (2%)
Query: 17 EIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFA 76
++++AT +F + L+G G FG VYKG L+DG +A K R S+QG EF++E+ L+F
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLF--DNTESVLEWHQRYAAAIGTAKGL 134
RH ++V L+GFC + N IL+Y+Y+ N +L HL+ D + W QR IG A+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 135 RFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTT--DDPVQTKILGTLGYL 192
+LH IIHRD++ NILL +FVP + DFG+++ T + + GTLGY+
Sbjct: 153 HYLHTRA----IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 193 APEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHEL 252
PEY G ++ ++DVY+FG++L +++ R + + +L +WA L ++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 253 IDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+DP + + L TA C+ + E RPSMG+V+ LE
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 158/296 (53%), Gaps = 21/296 (7%)
Query: 13 FSFSEIQQATGDFSKE------NLLGEGGFGHVYKGELKDGQMIAAKVRK--EASTQGFA 64
FSF E++ T +F + N +GEGGFG VYKG + + + K+ + +T+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 65 E-FQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL--FDNTESVLEWH 121
+ F E+ V+ +H+N+V LLGF + LVY Y+ N SL L D T L WH
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP-LSWH 133
Query: 122 QRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW--KTTDD 179
R A G A G+ FLHE IHRD++ +NILL F + DFGLAR K
Sbjct: 134 MRCKIAQGAANGINFLHENHH----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 180 PVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQW 239
+ ++I+GT Y+APE A G ++ ++D+Y+FG++LL++++G VD + EPQ L
Sbjct: 190 VMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQLLLDIK 247
Query: 240 AEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E E+ + + ID ++ N D+ + M A C+ RP + +V +LL+
Sbjct: 248 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 157/296 (53%), Gaps = 21/296 (7%)
Query: 13 FSFSEIQQATGDFSKE------NLLGEGGFGHVYKGELKDGQMIAAKVRK--EASTQGFA 64
FSF E++ T +F + N +GEGGFG VYKG + + + K+ + +T+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 65 E-FQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL--FDNTESVLEWH 121
+ F E+ V+ +H+N+V LLGF + LVY Y+ N SL L D T L WH
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP-LSWH 133
Query: 122 QRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW--KTTDD 179
R A G A G+ FLHE IHRD++ +NILL F + DFGLAR K
Sbjct: 134 MRCKIAQGAANGINFLHENHH----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 180 PVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQW 239
+ +I+GT Y+APE A G ++ ++D+Y+FG++LL++++G VD + EPQ L
Sbjct: 190 VMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQLLLDIK 247
Query: 240 AEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E E+ + + ID ++ N D+ + M A C+ RP + +V +LL+
Sbjct: 248 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 157/296 (53%), Gaps = 21/296 (7%)
Query: 13 FSFSEIQQATGDFSKE------NLLGEGGFGHVYKGELKDGQMIAAKVRK--EASTQGFA 64
FSF E++ T +F + N +GEGGFG VYKG + + + K+ + +T+
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 65 E-FQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL--FDNTESVLEWH 121
+ F E+ V+ +H+N+V LLGF + LVY Y+ N SL L D T L WH
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP-LSWH 127
Query: 122 QRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW--KTTDD 179
R A G A G+ FLHE IHRD++ +NILL F + DFGLAR K
Sbjct: 128 MRCKIAQGAANGINFLHENHH----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 180 PVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQW 239
+ +I+GT Y+APE A G ++ ++D+Y+FG++LL++++G VD + EPQ L
Sbjct: 184 VMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQLLLDIK 241
Query: 240 AEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E E+ + + ID ++ N D+ + M A C+ RP + +V +LL+
Sbjct: 242 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 150/296 (50%), Gaps = 21/296 (7%)
Query: 13 FSFSEIQQATGDFSKE------NLLGEGGFGHVYKGELKDGQMIAAKVRK--EASTQGFA 64
FSF E++ T +F + N GEGGFG VYKG + + + K+ + +T+
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 65 E-FQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSL--HWHLFDNTESVLEWH 121
+ F E+ V +H+N+V LLGF + LVY Y N SL D T L WH
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP-LSWH 124
Query: 122 QRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW--KTTDD 179
R A G A G+ FLHE IHRD++ +NILL F + DFGLAR K
Sbjct: 125 XRCKIAQGAANGINFLHENHH----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 180 PVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQW 239
++I+GT Y APE A G ++ ++D+Y+FG++LL++++G VD + EPQ L
Sbjct: 181 VXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQLLLDIK 238
Query: 240 AEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E E+ + + ID + N D+ + A C+ RP + +V +LL+
Sbjct: 239 EEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 111/200 (55%), Gaps = 19/200 (9%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRK--EASTQGFAEFQSEVYVLNFARHKNIVMLLGFC 88
+G G FG VYKG+ +A K+ K + + + F F++EV VL RH NI++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIH 148
K+NL I V ++ SL+ HL E+ + Q A TA+G+ +LH + IIH
Sbjct: 102 TKDNLAI-VTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKN----IIH 155
Query: 149 RDMRPSNILLTHDFVPMLGDFGLA----RWKTTDDPVQTKILGTLGYLAPEY---AENGI 201
RDM+ +NI L +GDFGLA RW + Q G++ ++APE +N
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT--GSVLWMAPEVIRMQDNNP 213
Query: 202 VSIRTDVYAFGIILLQLMSG 221
S ++DVY++GI+L +LM+G
Sbjct: 214 FSFQSDVYSYGIVLYELMTG 233
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 15/207 (7%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
G + +G G FG VYKG+ + + Q F++EV VL RH NI+
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ +G+ K L I+ C S +H +E+ E + A TA+G+ +LH +
Sbjct: 84 LFMGYSTKPQLAIVTQ--WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS- 140
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLA----RWKTTDDPVQTKILGTLGYLAPEY-- 196
IIHRD++ +NI L D +GDFGLA RW + Q + G++ ++APE
Sbjct: 141 ---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ--LSGSILWMAPEVIR 195
Query: 197 -AENGIVSIRTDVYAFGIILLQLMSGR 222
++ S ++DVYAFGI+L +LM+G+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 15/207 (7%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
G + +G G FG VYKG+ + + Q F++EV VL RH NI+
Sbjct: 12 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ +G+ K L I+ C S +H +E+ E + A TA+G+ +LH +
Sbjct: 72 LFMGYSTKPQLAIVTQ--WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS- 128
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLA----RWKTTDDPVQTKILGTLGYLAPEY-- 196
IIHRD++ +NI L D +GDFGLA RW + Q + G++ ++APE
Sbjct: 129 ---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIR 183
Query: 197 -AENGIVSIRTDVYAFGIILLQLMSGR 222
++ S ++DVYAFGI+L +LM+G+
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
G + +G G FG VYKG+ + + Q F++EV VL RH NI+
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ +G+ K L I+ C S +H E+ E + A TA+G+ +LH +
Sbjct: 96 LFMGYSTKPQLAIVTQ--WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 152
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLA----RWKTTDDPVQTKILGTLGYLAPEY-- 196
IIHRD++ +NI L D +GDFGLA RW + Q + G++ ++APE
Sbjct: 153 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ--LSGSILWMAPEVIR 207
Query: 197 -AENGIVSIRTDVYAFGIILLQLMSGR 222
+ S ++DVYAFGI+L +LM+G+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
G + +G G FG VYKG+ + + Q F++EV VL RH NI+
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ +G+ L I+ C S +H +E+ E + A TA+G+ +LH +
Sbjct: 84 LFMGYSTAPQLAIVTQ--WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS- 140
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLA----RWKTTDDPVQTKILGTLGYLAPEY-- 196
IIHRD++ +NI L D +GDFGLA RW + Q + G++ ++APE
Sbjct: 141 ---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ--LSGSILWMAPEVIR 195
Query: 197 -AENGIVSIRTDVYAFGIILLQLMSGR 222
++ S ++DVYAFGI+L +LM+G+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
G + +G G FG VYKG+ + + Q F++EV VL RH NI+
Sbjct: 35 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ +G+ K L I+ C S +H E+ E + A TA+G+ +LH +
Sbjct: 95 LFMGYSTKPQLAIVTQ--WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 151
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLA----RWKTTDDPVQTKILGTLGYLAPEY-- 196
IIHRD++ +NI L D +GDFGLA RW + Q + G++ ++APE
Sbjct: 152 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIR 206
Query: 197 -AENGIVSIRTDVYAFGIILLQLMSGR 222
+ S ++DVYAFGI+L +LM+G+
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
G + +G G FG VYKG+ + + Q F++EV VL RH NI+
Sbjct: 28 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ +G+ K L I+ C S +H E+ E + A TA+G+ +LH +
Sbjct: 88 LFMGYSTKPQLAIVTQ--WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 144
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLA----RWKTTDDPVQTKILGTLGYLAPEY-- 196
IIHRD++ +NI L D +GDFGLA RW + Q + G++ ++APE
Sbjct: 145 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ--LSGSILWMAPEVIR 199
Query: 197 -AENGIVSIRTDVYAFGIILLQLMSGR 222
+ S ++DVYAFGI+L +LM+G+
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
G + +G G FG VYKG+ + + Q F++EV VL RH NI+
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ +G+ K L I+ C S +H E+ E + A TA+G+ +LH +
Sbjct: 96 LFMGYSTKPQLAIVTQ--WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 152
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLA----RWKTTDDPVQTKILGTLGYLAPEY-- 196
IIHRD++ +NI L D +GDFGLA RW + Q + G++ ++APE
Sbjct: 153 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIR 207
Query: 197 -AENGIVSIRTDVYAFGIILLQLMSGR 222
+ S ++DVYAFGI+L +LM+G+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
G + +G G FG VYKG+ + + Q F++EV VL RH NI+
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ +G+ K L I+ C S +H E+ E + A TA+G+ +LH +
Sbjct: 73 LFMGYSTKPQLAIVTQ--WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 129
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLA----RWKTTDDPVQTKILGTLGYLAPEY-- 196
IIHRD++ +NI L D +GDFGLA RW + Q + G++ ++APE
Sbjct: 130 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIR 184
Query: 197 -AENGIVSIRTDVYAFGIILLQLMSGR 222
+ S ++DVYAFGI+L +LM+G+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
G + +G G FG VYKG+ + + Q F++EV VL RH NI+
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ +G+ K L I+ C S +H E+ E + A TA+G+ +LH +
Sbjct: 68 LFMGYSTKPQLAIVTQ--WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLA----RWKTTDDPVQTKILGTLGYLAPEY-- 196
IIHRD++ +NI L D +GDFGLA RW + Q + G++ ++APE
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ--LSGSILWMAPEVIR 179
Query: 197 -AENGIVSIRTDVYAFGIILLQLMSGR 222
+ S ++DVYAFGI+L +LM+G+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
G + +G G FG VYKG+ + + Q F++EV VL RH NI+
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ +G+ K L I+ C S +H E+ E + A TA+G+ +LH +
Sbjct: 68 LFMGYSTKPQLAIVTQW--CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLA----RWKTTDDPVQTKILGTLGYLAPEY-- 196
IIHRD++ +NI L D +GDFGLA RW + Q + G++ ++APE
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIR 179
Query: 197 -AENGIVSIRTDVYAFGIILLQLMSGR 222
+ S ++DVYAFGI+L +LM+G+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
G + +G G FG VYKG+ + + Q F++EV VL RH NI+
Sbjct: 10 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ +G+ K L I+ C S +H E+ E + A TA+G+ +LH +
Sbjct: 70 LFMGYSTKPQLAIVTQW--CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 126
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLA----RWKTTDDPVQTKILGTLGYLAPEY-- 196
IIHRD++ +NI L D +GDFGLA RW + Q + G++ ++APE
Sbjct: 127 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIR 181
Query: 197 -AENGIVSIRTDVYAFGIILLQLMSGR 222
+ S ++DVYAFGI+L +LM+G+
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
G + +G G FG VYKG+ + + Q F++EV VL RH NI+
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ +G+ K L I+ C S +H E+ E + A TA+G+ +LH +
Sbjct: 73 LFMGYSTKPQLAIVTQ--WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 129
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLA----RWKTTDDPVQTKILGTLGYLAPEY-- 196
IIHRD++ +NI L D +GDFGLA RW + Q + G++ ++APE
Sbjct: 130 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIR 184
Query: 197 -AENGIVSIRTDVYAFGIILLQLMSGR 222
+ S ++DVYAFGI+L +LM+G+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
G + +G G FG VYKG+ + + Q F++EV VL RH NI+
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ +G+ L I+ C S +H E+ E + A TA+G+ +LH +
Sbjct: 68 LFMGYSTAPQLAIVTQW--CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLA----RWKTTDDPVQTKILGTLGYLAPEY-- 196
IIHRD++ +NI L D +GDFGLA RW + Q + G++ ++APE
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIR 179
Query: 197 -AENGIVSIRTDVYAFGIILLQLMSGR 222
+ S ++DVYAFGI+L +LM+G+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEAS--TQGFAEFQSEVYVLNFARHKNI 81
D + + +G G FG V++ E G +A K+ E + EF EV ++ RH NI
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 82 VMLLGFCCKE-NLNILVYEYICNKSLHWHLFDN-TESVLEWHQRYAAAIGTAKGLRFLHE 139
V+ +G + NL+I V EY+ SL+ L + L+ +R + A AKG+ +LH
Sbjct: 97 VLFMGAVTQPPNLSI-VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 140 ECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
R PI+HRD++ N+L+ + + DFGL+R K + GT ++APE +
Sbjct: 156 --RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRD 213
Query: 200 GIVSIRTDVYAFGIILLQLMS 220
+ ++DVY+FG+IL +L +
Sbjct: 214 EPSNEKSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEAS--TQGFAEFQSEVYVLNFARHKNI 81
D + + +G G FG V++ E G +A K+ E + EF EV ++ RH NI
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 82 VMLLGFCCKE-NLNILVYEYICNKSLHWHLFDN-TESVLEWHQRYAAAIGTAKGLRFLHE 139
V+ +G + NL+I V EY+ SL+ L + L+ +R + A AKG+ +LH
Sbjct: 97 VLFMGAVTQPPNLSI-VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 140 ECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
R PI+HR+++ N+L+ + + DFGL+R K + GT ++APE +
Sbjct: 156 --RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD 213
Query: 200 GIVSIRTDVYAFGIILLQLMS 220
+ ++DVY+FG+IL +L +
Sbjct: 214 EPSNEKSDVYSFGVILWELAT 234
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 21 ATGDFSKENLLGEGGFGHVYKGEL-KDGQMIAAKVRKEASTQG-------FAEFQSEVYV 72
A + E +G+GGFG V+KG L KD ++A K ++G F EFQ EV++
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 73 LNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
++ H NIV L G N +V E++ L+ L D + +W + + A
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTH--DFVPM---LGDFGLARWKTTDDPVQTKILG 187
G+ ++ + PI+HRD+R NI L + P+ + DFGL++ + +LG
Sbjct: 134 GIEYMQNQ--NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS---VSGLLG 188
Query: 188 TLGYLAPEY--AENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIE 245
++APE AE + + D Y+F +IL +++G D + + E +
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL- 247
Query: 246 KLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLL 294
+ + E PR+ N + LC +P+ RP +V+ L
Sbjct: 248 RPTIPEDCPPRLRNVIE------------LCWSGDPKKRPHFSYIVKEL 284
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 139/311 (44%), Gaps = 51/311 (16%)
Query: 9 DPMKFSFSEIQQATGDFSKE---------NLLGEGGFGHVYKGELK-DGQ---MIAAKVR 55
DP F+F + +A +F+KE ++G G FG V G LK G+ +A K
Sbjct: 12 DP--FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL 69
Query: 56 KEASTQG-FAEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNT 114
K T+ +F SE ++ H N++ L G K +++ E++ N SL L N
Sbjct: 70 KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN- 128
Query: 115 ESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW 174
+ Q G A G+++L + +HRD+ NIL+ + V + DFGL+R+
Sbjct: 129 DGQFTVIQLVGMLRGIAAGMKYLADMN----YVHRDLAARNILVNSNLVCKVSDFGLSRF 184
Query: 175 --KTTDDPVQTKILG---TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMS--GRKVVDM 227
T DP T LG + + APE + + +DV+++GI++ ++MS R DM
Sbjct: 185 LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 244
Query: 228 NGEEPQQSLRQ---WAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGR 284
++ ++ Q P+ ALH+L+ C Q++ R
Sbjct: 245 TNQDVINAIEQDYRLPPPMDCPSALHQLM--------------------LDCWQKDRNHR 284
Query: 285 PSMGEVVRLLE 295
P G++V L+
Sbjct: 285 PKFGQIVNTLD 295
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 42/285 (14%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRK----EASTQGFAEFQSEVYVLNFARH 78
+ + E ++G GGFG VY+ G +A K + E +Q + E + +H
Sbjct: 7 AELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH 65
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDN---TESVLEWHQRYAAAIGTAKGLR 135
NI+ L G C KE LV E+ L+ L + ++ W A+ A+G+
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMN 119
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDF--------VPMLGDFGLAR-WKTTDDPVQTKIL 186
+LH+E PIIHRD++ SNIL+ + + DFGLAR W T +
Sbjct: 120 YLHDEAIV-PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT---TKMSAA 175
Query: 187 GTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEK 246
G ++APE + S +DV+++G++L +L++ GE P + + A +
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT--------GEVPFRGIDGLA--VAYG 225
Query: 247 LALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
+A+++L P + + AK C +P RPS ++
Sbjct: 226 VAMNKLALPIPSTCPEPF-----AKLMEDCWNPDPHSRPSFTNIL 265
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 36/289 (12%)
Query: 21 ATGDFSKENLLGEGGFGHVYKGEL-KDGQMIAAKVRKEASTQG-------FAEFQSEVYV 72
A + E +G+GGFG V+KG L KD ++A K ++G F EFQ EV++
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 73 LNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
++ H NIV L G N +V E++ L+ L D + +W + + A
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTH--DFVPM---LGDFGLARWKTTDDPVQTKILG 187
G+ ++ + PI+HRD+R NI L + P+ + DFG ++ + +LG
Sbjct: 134 GIEYMQNQ--NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS---VSGLLG 188
Query: 188 TLGYLAPEY--AENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIE 245
++APE AE + + D Y+F +IL +++G D + + E +
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL- 247
Query: 246 KLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLL 294
+ + E PR+ N + LC +P+ RP +V+ L
Sbjct: 248 RPTIPEDCPPRLRNVIE------------LCWSGDPKKRPHFSYIVKEL 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 36/289 (12%)
Query: 21 ATGDFSKENLLGEGGFGHVYKGEL-KDGQMIAAKVRKEASTQG-------FAEFQSEVYV 72
A + E +G+GGFG V+KG L KD ++A K ++G F EFQ EV++
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 73 LNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
++ H NIV L G N +V E++ L+ L D + +W + + A
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTH--DFVPM---LGDFGLARWKTTDDPVQTKILG 187
G+ ++ + PI+HRD+R NI L + P+ + DF L++ + +LG
Sbjct: 134 GIEYMQNQ--NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS---VSGLLG 188
Query: 188 TLGYLAPEY--AENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIE 245
++APE AE + + D Y+F +IL +++G D + + E +
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL- 247
Query: 246 KLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLL 294
+ + E PR+ N + LC +P+ RP +V+ L
Sbjct: 248 RPTIPEDCPPRLRNVIE------------LCWSGDPKKRPHFSYIVKEL 284
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 32/294 (10%)
Query: 9 DPMKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ 67
DP ++ + + D + ++ LG G +G VY+G K + +A K KE T EF
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFL 62
Query: 68 SEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E V+ +H N+V LLG C +E ++ E++ +L +L + + A
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG 187
+ + +L ++ IHRD+ N L+ + + + DFGL+R T D T G
Sbjct: 123 TQISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TXTAHAG 176
Query: 188 T---LGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLI 244
+ + APE SI++DV+AFG++L ++ + G P P I
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGI 221
Query: 245 EKLALHELI--DPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ ++EL+ D R+E E +Y + + C Q NP RPS E+ + E
Sbjct: 222 DLSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 32/294 (10%)
Query: 9 DPMKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ 67
DP ++ + + D + ++ LG G +G VY+G K + +A K KE T EF
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFL 62
Query: 68 SEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E V+ +H N+V LLG C +E ++ E++ +L +L + + A
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG 187
+ + +L ++ IHRD+ N L+ + + + DFGL+R T D T G
Sbjct: 123 TQISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 176
Query: 188 T---LGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLI 244
+ + APE SI++DV+AFG++L ++ + G P P I
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGI 221
Query: 245 EKLALHELI--DPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ ++EL+ D R+E E +Y + + C Q NP RPS E+ + E
Sbjct: 222 DLSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 272
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 32/294 (10%)
Query: 9 DPMKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ 67
DP ++ + + D + ++ LG G +G VY+G K + +A K KE T EF
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFL 62
Query: 68 SEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E V+ +H N+V LLG C +E ++ E++ +L +L + + A
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 122
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG 187
+ + +L ++ IHRD+ N L+ + + + DFGL+R T D T G
Sbjct: 123 TQISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 176
Query: 188 T---LGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLI 244
+ + APE SI++DV+AFG++L ++ + G P P I
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGI 221
Query: 245 EKLALHELI--DPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ ++EL+ D R+E E +Y + + C Q NP RPS E+ + E
Sbjct: 222 DLSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 32/294 (10%)
Query: 9 DPMKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ 67
DP ++ + + D + ++ LG G +G VY+G K + +A K KE T EF
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFL 62
Query: 68 SEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E V+ +H N+V LLG C +E ++ E++ +L +L + + A
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG 187
+ + +L ++ IHRD+ N L+ + + + DFGL+R T D T G
Sbjct: 123 TQISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 176
Query: 188 T---LGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLI 244
+ + APE SI++DV+AFG++L ++ + G P P I
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGI 221
Query: 245 EKLALHELI--DPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ ++EL+ D R+E E +Y + + C Q NP RPS E+ + E
Sbjct: 222 DLSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 272
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 32/294 (10%)
Query: 9 DPMKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ 67
DP ++ + + D + ++ LG G +G VY+G K + +A K KE T EF
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFL 62
Query: 68 SEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E V+ +H N+V LLG C +E ++ E++ +L +L + + A
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG 187
+ + +L ++ IHRD+ N L+ + + + DFGL+R T D T G
Sbjct: 123 TQISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAG 176
Query: 188 T---LGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLI 244
+ + APE SI++DV+AFG++L ++ + G P P I
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGI 221
Query: 245 EKLALHELI--DPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ ++EL+ D R+E E +Y + + C Q NP RPS E+ + E
Sbjct: 222 DLSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 272
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 32/289 (11%)
Query: 14 SFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYV 72
S + + D + ++ LG G FG VY+G K + +A K KE T EF E V
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAV 60
Query: 73 LNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
+ +H N+V LLG C +E ++ E++ +L +L + + A +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---L 189
+ +L ++ IHRD+ N L+ + + + DFGL+R T D T G +
Sbjct: 121 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TXTAHAGAKFPI 174
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE SI++DV+AFG++L ++ + G P P I+ +
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDPSQV 219
Query: 250 HELI--DPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+EL+ D R+E E +Y + + C Q NP RPS E+ + E
Sbjct: 220 YELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 265
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 32/292 (10%)
Query: 11 MKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSE 69
M ++ + + D + ++ LG G +G VY+G K + +A K KE T EF E
Sbjct: 3 MSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKE 61
Query: 70 VYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIG 129
V+ +H N+V LLG C +E ++ E++ +L +L + + A
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD---PVQTKIL 186
+ + +L ++ IHRD+ N L+ + + + DFGL+R T D P K
Sbjct: 122 ISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF- 176
Query: 187 GTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEK 246
+ + APE SI++DV+AFG++L ++ + G P P I+
Sbjct: 177 -PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDL 220
Query: 247 LALHELI--DPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
++EL+ D R+E E +Y + + C Q NP RPS E+ + E
Sbjct: 221 SQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 269
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 32/292 (10%)
Query: 11 MKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSE 69
M ++ + + D + ++ LG G +G VY+G K + +A K KE T EF E
Sbjct: 2 MSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKE 60
Query: 70 VYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIG 129
V+ +H N+V LLG C +E ++ E++ +L +L + + A
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 120
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD---PVQTKIL 186
+ + +L ++ IHRD+ N L+ + + + DFGL+R T D P K
Sbjct: 121 ISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF- 175
Query: 187 GTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEK 246
+ + APE SI++DV+AFG++L ++ + G P P I+
Sbjct: 176 -PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDL 219
Query: 247 LALHELI--DPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
++EL+ D R+E E +Y + + C Q NP RPS E+ + E
Sbjct: 220 SQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 268
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 32/289 (11%)
Query: 14 SFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYV 72
S + + D + ++ LG G +G VY+G K + +A K KE T EF E V
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAV 60
Query: 73 LNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
+ +H N+V LLG C +E ++ E++ +L +L + + A +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---L 189
+ +L ++ IHRD+ N L+ + + + DFGL+R T D T G +
Sbjct: 121 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TXTAHAGAKFPI 174
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE SI++DV+AFG++L ++ + G P P I+ +
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDPSQV 219
Query: 250 HELI--DPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+EL+ D R+E E +Y + + C Q NP RPS E+ + E
Sbjct: 220 YELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 265
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 128/287 (44%), Gaps = 28/287 (9%)
Query: 14 SFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYV 72
S + + D + ++ LG G +G VY+G K + +A K KE T EF E V
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAV 60
Query: 73 LNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
+ +H N+V LLG C +E ++ E++ +L +L + + A +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD-PVQTKILGTLGY 191
+ +L ++ IHRD+ N L+ + + + DFGL+R T D + +
Sbjct: 121 AMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKW 176
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHE 251
APE SI++DV+AFG++L ++ + G P P I+ ++E
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDPSQVYE 221
Query: 252 LI--DPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
L+ D R+E E +Y + + C Q NP RPS E+ + E
Sbjct: 222 LLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 265
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 130/286 (45%), Gaps = 40/286 (13%)
Query: 31 LGEGGFGHVYKGELKD-------GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY+G +D ++ V + AS + EF +E V+ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD----------NTESVLEWHQRYAAAIGTAKG 133
LLG K ++V E + + L +L L+ + AA I A G
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI--ADG 139
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQT--KILGTLGY 191
+ +L+ + +HRD+ N ++ HDF +GDFG+ R D + K L + +
Sbjct: 140 MAYLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHE 251
+APE ++G+ + +D+++FG++L ++ S E+P Q L E +++ +
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSN--EQVLKFVMDGG 246
Query: 252 LIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
+D +L M C Q NP+ RP+ E+V LL+ +
Sbjct: 247 YLDQPDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLLKDD 286
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 137/299 (45%), Gaps = 45/299 (15%)
Query: 23 GDFSKENL-----LGEGGFGHVYKGELKD-------GQMIAAKVRKEASTQGFAEFQSEV 70
G+ S+E + LG+G FG VY+G +D ++ V + AS + EF +E
Sbjct: 11 GEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEA 70
Query: 71 YVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFD----------NTESVLEW 120
V+ ++V LLG K ++V E + + L +L L+
Sbjct: 71 SVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 130
Query: 121 HQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTD 178
+ AA I A G+ +L+ + +HRD+ N ++ HDF +GDFG+ R ++T
Sbjct: 131 MIQMAAEI--ADGMAYLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY 184
Query: 179 DPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQ 238
K L + ++APE ++G+ + +D+++FG++L ++ S E+P Q L
Sbjct: 185 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSN 237
Query: 239 WAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
E +++ + +D +L M C Q NP+ RP+ E+V LL+ +
Sbjct: 238 --EQVLKFVMDGGYLDQPDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLLKDD 288
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 130/286 (45%), Gaps = 40/286 (13%)
Query: 31 LGEGGFGHVYKGELKD-------GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY+G +D ++ V + AS + EF +E V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD----------NTESVLEWHQRYAAAIGTAKG 133
LLG K ++V E + + L +L L+ + AA I A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI--ADG 142
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQT--KILGTLGY 191
+ +L+ + +HRD+ N ++ HDF +GDFG+ R D + K L + +
Sbjct: 143 MAYLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHE 251
+APE ++G+ + +D+++FG++L ++ S E+P Q L E +++ +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSN--EQVLKFVMDGG 249
Query: 252 LIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
+D +L M C Q NP+ RP+ E+V LL+ +
Sbjct: 250 YLDQPDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLLKDD 289
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 32/292 (10%)
Query: 11 MKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSE 69
M ++ + + D + ++ LG G +G VY+G K + +A K KE T EF E
Sbjct: 3 MSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKE 61
Query: 70 VYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIG 129
V+ +H N+V LLG C +E ++ E++ +L +L + + A
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT- 188
+ + +L ++ IHRD+ N L+ + + + DFGL+R T D T G
Sbjct: 122 ISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAK 175
Query: 189 --LGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEK 246
+ + APE SI++DV+AFG++L ++ + G P P I+
Sbjct: 176 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDL 220
Query: 247 LALHELI--DPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
++EL+ D R+E E +Y + + C Q NP RPS E+ + E
Sbjct: 221 SQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 269
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 127/270 (47%), Gaps = 27/270 (10%)
Query: 28 ENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
E ++G G FG V K + + + ++ E+ + F E+ L+ H NIV L G
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFI---VELRQLSRVNHPNIVKLYGA 70
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA--IGTAKGLRFLHEECRGGP 145
C N LV EY SL+ ++ E + + +A + + ++G+ +LH +
Sbjct: 71 CL--NPVCLVMEYAEGGSLY-NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM-QPKA 126
Query: 146 IIHRDMRPSNILLTHD-FVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
+IHRD++P N+LL V + DFG A T T G+ ++APE E S
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEVFEGSNYSE 183
Query: 205 RTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTY 264
+ DV+++GIIL ++++ RK D G + + W A+H P + +
Sbjct: 184 KCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--W--------AVHNGTRPPLIKNLPKP 233
Query: 265 ELYLMAKTAYLCVQRNPEGRPSMGEVVRLL 294
LM + C ++P RPSM E+V+++
Sbjct: 234 IESLMTR----CWSKDPSQRPSMEEIVKIM 259
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 125/281 (44%), Gaps = 40/281 (14%)
Query: 31 LGEGGFGHVYKGEL------KDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVML 84
LGEG FG V+ E +D ++A K KEAS +FQ E +L +H++IV
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 85 LGFCCKENLNILVYEYI----CNKSLHWH-----LFDNTESV----LEWHQRYAAAIGTA 131
G C + ++V+EY+ N+ L H L E V L Q A A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTL 189
G+ +L G +HRD+ N L+ V +GDFG++R + T V + + +
Sbjct: 146 AGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
++ PE + +DV++FG++L ++ + G++P L E +
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFT-------YGKQPWYQLSN-TEAIDCITQG 253
Query: 250 HELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEV 290
EL PR E+Y + + C QR P+ R S+ +V
Sbjct: 254 RELERPRACPP----EVYAIMRG---CWQREPQQRHSIKDV 287
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 127/270 (47%), Gaps = 27/270 (10%)
Query: 28 ENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
E ++G G FG V K + + + ++ E+ + F E+ L+ H NIV L G
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFI---VELRQLSRVNHPNIVKLYGA 69
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA--IGTAKGLRFLHEECRGGP 145
C N LV EY SL+ ++ E + + +A + + ++G+ +LH +
Sbjct: 70 CL--NPVCLVMEYAEGGSLY-NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM-QPKA 125
Query: 146 IIHRDMRPSNILLTHD-FVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
+IHRD++P N+LL V + DFG A T T G+ ++APE E S
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEVFEGSNYSE 182
Query: 205 RTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTY 264
+ DV+++GIIL ++++ RK D G + + W A+H P + +
Sbjct: 183 KCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--W--------AVHNGTRPPLIKNLPKP 232
Query: 265 ELYLMAKTAYLCVQRNPEGRPSMGEVVRLL 294
LM + C ++P RPSM E+V+++
Sbjct: 233 IESLMTR----CWSKDPSQRPSMEEIVKIM 258
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
D + ++ LG G +G VY+G K + +A K KE T EF E V+ +H N+V
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 73
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
LLG C +E ++ E++ +L +L + + A + + +L ++
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-- 131
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAEN 199
IHRD+ N L+ + + + DFGL+R T D T G + + APE
Sbjct: 132 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TXTAHAGAKFPIKWTAPESLAY 187
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI--DPRI 257
SI++DV+AFG++L ++ + G P P I+ ++EL+ D R+
Sbjct: 188 NKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDLSQVYELLEKDYRM 232
Query: 258 ENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E E +Y + + C Q NP RPS E+ + E
Sbjct: 233 ERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 268
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 125/277 (45%), Gaps = 28/277 (10%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
D + ++ LG G +G VY+G K + +A K KE T EF E V+ +H N+V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
LLG C +E ++ E++ +L +L + + A + + +L ++
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-- 130
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD-PVQTKILGTLGYLAPEYAENGI 201
IHRD+ N L+ + + + DFGL+R T D + + APE
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 202 VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI--DPRIEN 259
SI++DV+AFG++L ++ + G P P I+ ++EL+ D R+E
Sbjct: 189 FSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDLSQVYELLEKDYRMER 233
Query: 260 SYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E +Y + + C Q NP RPS E+ + E
Sbjct: 234 PEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 32/292 (10%)
Query: 11 MKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSE 69
M ++ + + D + ++ LG G +G VY+G K + +A K KE T EF E
Sbjct: 3 MDPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKE 61
Query: 70 VYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIG 129
V+ +H N+V LLG C +E ++ E++ +L +L + + A
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT- 188
+ + +L ++ IHRD+ N L+ + + + DFGL+R T D T G
Sbjct: 122 ISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAK 175
Query: 189 --LGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEK 246
+ + APE SI++DV+AFG++L ++ + G P P I+
Sbjct: 176 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDL 220
Query: 247 LALHELI--DPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
++EL+ D R+E E +Y + + C Q NP RPS E+ + E
Sbjct: 221 SQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 269
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 125/281 (44%), Gaps = 40/281 (14%)
Query: 31 LGEGGFGHVYKGEL------KDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVML 84
LGEG FG V+ E +D ++A K KEAS +FQ E +L +H++IV
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 85 LGFCCKENLNILVYEYI----CNKSLHWH-----LFDNTESV----LEWHQRYAAAIGTA 131
G C + ++V+EY+ N+ L H L E V L Q A A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTL 189
G+ +L G +HRD+ N L+ V +GDFG++R + T V + + +
Sbjct: 140 AGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
++ PE + +DV++FG++L ++ + G++P L E +
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFT-------YGKQPWYQLSN-TEAIDCITQG 247
Query: 250 HELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEV 290
EL PR E+Y + + C QR P+ R S+ +V
Sbjct: 248 RELERPRACPP----EVYAIMRG---CWQREPQQRHSIKDV 281
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L T L Q A A G+ ++ +HRD
Sbjct: 75 EPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 129
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 130 LRAANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 188 VWSFGILLTELTTKGRV 204
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 129/286 (45%), Gaps = 40/286 (13%)
Query: 31 LGEGGFGHVYKGELKD-------GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY+G +D ++ V + AS + EF +E V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD----------NTESVLEWHQRYAAAIGTAKG 133
LLG K ++V E + + L +L L+ + AA I A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI--ADG 142
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQT--KILGTLGY 191
+ +L+ + +HRD+ N ++ HDF +GDFG+ R D + K L + +
Sbjct: 143 MAYLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHE 251
+APE ++G+ + +D+++FG++L ++ S E+P Q L E +++ +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSN--EQVLKFVMDGG 249
Query: 252 LIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
+D +L M C Q NP RP+ E+V LL+ +
Sbjct: 250 YLDQPDNCPERVTDLMRM------CWQFNPNMRPTFLEIVNLLKDD 289
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
D + ++ LG G +G VY+G K + +A K KE T EF E V+ +H N+V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
LLG C +E ++ E++ +L +L + + A + + +L ++
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-- 130
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAEN 199
IHRD+ N L+ + + + DFGL+R T D T G + + APE
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAY 186
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI--DPRI 257
SI++DV+AFG++L ++ + G P P I+ ++EL+ D R+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDLSQVYELLEKDYRM 231
Query: 258 ENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E E +Y + + C Q NP RPS E+ + E
Sbjct: 232 ERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
D + ++ LG G +G VY+G K + +A K KE T EF E V+ +H N+V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
LLG C +E ++ E++ +L +L + + A + + +L ++
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-- 130
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAEN 199
IHRD+ N L+ + + + DFGL+R T D T G + + APE
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAY 186
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI--DPRI 257
SI++DV+AFG++L ++ + G P P I+ ++EL+ D R+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDLSQVYELLEKDYRM 231
Query: 258 ENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E E +Y + + C Q NP RPS E+ + E
Sbjct: 232 ERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 267
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 125/281 (44%), Gaps = 40/281 (14%)
Query: 31 LGEGGFGHVYKGEL------KDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVML 84
LGEG FG V+ E +D ++A K KEAS +FQ E +L +H++IV
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 85 LGFCCKENLNILVYEYI----CNKSLHWH-----LFDNTESV----LEWHQRYAAAIGTA 131
G C + ++V+EY+ N+ L H L E V L Q A A A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTL 189
G+ +L G +HRD+ N L+ V +GDFG++R + T V + + +
Sbjct: 169 AGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
++ PE + +DV++FG++L ++ + G++P L E +
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFT-------YGKQPWYQLSN-TEAIDCITQG 276
Query: 250 HELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEV 290
EL PR E+Y + + C QR P+ R S+ +V
Sbjct: 277 RELERPRACPP----EVYAIMRG---CWQREPQQRHSIKDV 310
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
D + ++ LG G +G VY+G K + +A K KE T EF E V+ +H N+V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
LLG C +E ++ E++ +L +L + + A + + +L ++
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-- 130
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAEN 199
IHRD+ N L+ + + + DFGL+R T D T G + + APE
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAY 186
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI--DPRI 257
SI++DV+AFG++L ++ + G P P I+ ++EL+ D R+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDLSQVYELLEKDYRM 231
Query: 258 ENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E E +Y + + C Q NP RPS E+ + E
Sbjct: 232 ERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
D + ++ LG G +G VY+G K + +A K KE T EF E V+ +H N+V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
LLG C +E ++ E++ +L +L + + A + + +L ++
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-- 130
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAEN 199
IHRD+ N L+ + + + DFGL+R T D T G + + APE
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAY 186
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI--DPRI 257
SI++DV+AFG++L ++ + G P P I+ ++EL+ D R+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDLSQVYELLEKDYRM 231
Query: 258 ENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E E +Y + + C Q NP RPS E+ + E
Sbjct: 232 ERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 125/277 (45%), Gaps = 28/277 (10%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
D + ++ LG G +G VY+G K + +A K KE T EF E V+ +H N+V
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 85
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
LLG C +E ++ E++ +L +L + + A + + +L ++
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-- 143
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD-PVQTKILGTLGYLAPEYAENGI 201
IHRD+ N L+ + + + DFGL+R T D + + APE
Sbjct: 144 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 201
Query: 202 VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI--DPRIEN 259
SI++DV+AFG++L ++ + G P P I+ ++EL+ D R+E
Sbjct: 202 FSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDLSQVYELLEKDYRMER 246
Query: 260 SYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E +Y + + C Q NP RPS E+ + E
Sbjct: 247 PEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 280
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
D + ++ LG G +G VY+G K + +A K KE T EF E V+ +H N+V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
LLG C +E ++ E++ +L +L + + A + + +L ++
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-- 130
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAEN 199
IHRD+ N L+ + + + DFGL+R T D T G + + APE
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAY 186
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI--DPRI 257
SI++DV+AFG++L ++ + G P P I+ ++EL+ D R+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDLSQVYELLEKDYRM 231
Query: 258 ENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E E +Y + + C Q NP RPS E+ + E
Sbjct: 232 ERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
D + ++ LG G +G VY+G K + +A K KE T EF E V+ +H N+V
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 76
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
LLG C +E ++ E++ +L +L + + A + + +L ++
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-- 134
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAEN 199
IHRD+ N L+ + + + DFGL+R T D T G + + APE
Sbjct: 135 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAY 190
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI--DPRI 257
SI++DV+AFG++L ++ + G P P I+ ++EL+ D R+
Sbjct: 191 NKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDLSQVYELLEKDYRM 235
Query: 258 ENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E E +Y + + C Q NP RPS E+ + E
Sbjct: 236 ERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 271
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 131/286 (45%), Gaps = 40/286 (13%)
Query: 31 LGEGGFGHVYKGELKD-------GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY+G +D ++ V + AS + EF +E V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD----------NTESVLEWHQRYAAAIGTAKG 133
LLG K ++V E + + L +L L+ + AA I A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI--ADG 142
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGY 191
+ +L+ + +HRD+ N ++ HDF +GDFG+ R ++T K L + +
Sbjct: 143 MAYLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHE 251
+APE ++G+ + +D+++FG++L ++ S E+P Q L E +++ +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSN--EQVLKFVMDGG 249
Query: 252 LIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
+D +L M C Q NP+ RP+ E+V LL+ +
Sbjct: 250 YLDQPDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLLKDD 289
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G+G FG V G+ + ++ ++ +A+ Q F +E V+ RH N+V LLG +
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFL---AEASVMTQLRHSNLVQLLGVIVE 76
Query: 91 ENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHR 149
E + +V EY+ SL +L SVL ++ + + +L G +HR
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHR 132
Query: 150 DMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTD 207
D+ N+L++ D V + DFGL T + T+ G L + APE S ++D
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGL-----TKEASSTQDTGKLPVKWTAPEALREAAFSTKSD 187
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L ++ S +V
Sbjct: 188 VWSFGILLWEIYSFGRV 204
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 131/286 (45%), Gaps = 40/286 (13%)
Query: 31 LGEGGFGHVYKGELKD-------GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY+G +D ++ V + AS + EF +E V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD----------NTESVLEWHQRYAAAIGTAKG 133
LLG K ++V E + + L +L L+ + AA I A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI--ADG 142
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGY 191
+ +L+ + +HRD+ N ++ HDF +GDFG+ R ++T K L + +
Sbjct: 143 MAYLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHE 251
+APE ++G+ + +D+++FG++L ++ S E+P Q L E +++ +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSN--EQVLKFVMDGG 249
Query: 252 LIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
+D +L M C Q NP+ RP+ E+V LL+ +
Sbjct: 250 YLDQPDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLLKDD 289
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L T L Q A A G+ ++ +HRD
Sbjct: 78 EPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 132
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 133 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 191 VWSFGILLTELTTKGRV 207
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 121/277 (43%), Gaps = 28/277 (10%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V G+ K +A K+ KE S EF E + H +V G C K
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E +V EYI N L +L + + LE Q +G+ FL IHRD
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFLESH----QFIHRD 129
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+ N L+ D + DFG+ R+ D V + +GT + + APE S ++D
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS--VGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 208 VYAFGIILLQLMS-GRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYEL 266
V+AFGI++ ++ S G+ D+ +E +++ H L P + + DT
Sbjct: 188 VWAFGILMWEVFSLGKMPYDLYTN---------SEVVLKVSQGHRLYRPHLAS--DT--- 233
Query: 267 YLMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDRFHH 303
+ + Y C PE RP+ +++ +E ++ H
Sbjct: 234 --IYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDKH 268
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 28/269 (10%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G +A K K+ S A F +E ++ +H+ +V L +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I+ EY+ N SL L + L ++ A A+G+ F+ E IHRD
Sbjct: 88 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 142
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL++ + DFGLAR +D T G + + APE G +I++D
Sbjct: 143 LRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 200
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL-HELIDPRIENSYDTYEL 266
V++FGI+L ++++ ++ P+ +I+ L + ++ P +N + EL
Sbjct: 201 VWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRP--DNCPE--EL 247
Query: 267 YLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
Y + + LC + PE RP+ + +LE
Sbjct: 248 YQLMR---LCWKERPEDRPTFDYLRSVLE 273
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 28/269 (10%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G +A K K+ S A F +E ++ +H+ +V L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I+ EY+ N SL L + L ++ A A+G+ F+ E IHRD
Sbjct: 86 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 140
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL++ + DFGLAR +D T G + + APE G +I++D
Sbjct: 141 LRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL-HELIDPRIENSYDTYEL 266
V++FGI+L ++++ ++ P+ +I+ L + ++ P +N + EL
Sbjct: 199 VWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRP--DNCPE--EL 245
Query: 267 YLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
Y + + LC + PE RP+ + +LE
Sbjct: 246 YQLMR---LCWKERPEDRPTFDYLRSVLE 271
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L T L Q A A G+ ++ +HRD
Sbjct: 251 EPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM----NYVHRD 305
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 306 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 364 VWSFGILLTELTTKGRV 380
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L T L Q A A G+ ++ +HRD
Sbjct: 251 EPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM----NYVHRD 305
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 306 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 364 VWSFGILLTELTTKGRV 380
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 126/283 (44%), Gaps = 40/283 (14%)
Query: 28 ENLLGEGGFGHVYKGELK-DGQ---MIAAKVRKEASTQG-FAEFQSEVYVLNFARHKNIV 82
E ++G G FG V G LK G+ +A K K T+ +F SE ++ H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
L G K +++ E++ N SL L N + Q G A G+++L +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLADMN- 129
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARW--KTTDDPVQTKILG---TLGYLAPEYA 197
+HR + NIL+ + V + DFGL+R+ T DP T LG + + APE
Sbjct: 130 ---YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 198 ENGIVSIRTDVYAFGIILLQLMS--GRKVVDMNGEEPQQSLRQ---WAEPLIEKLALHEL 252
+ + +DV+++GI++ ++MS R DM ++ ++ Q P+ ALH+L
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQL 246
Query: 253 IDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ C Q++ RP G++V L+
Sbjct: 247 M--------------------LDCWQKDRNHRPKFGQIVNTLD 269
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 28/269 (10%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G +A K K+ S A F +E ++ +H+ +V L +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I+ EY+ N SL L + L ++ A A+G+ F+ E IHRD
Sbjct: 89 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 143
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL++ + DFGLAR +D T G + + APE G +I++D
Sbjct: 144 LRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL-HELIDPRIENSYDTYEL 266
V++FGI+L ++++ ++ P+ +I+ L + ++ P +N + EL
Sbjct: 202 VWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRP--DNCPE--EL 248
Query: 267 YLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
Y + + LC + PE RP+ + +LE
Sbjct: 249 YQLMR---LCWKERPEDRPTFDYLRSVLE 274
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 135/309 (43%), Gaps = 49/309 (15%)
Query: 9 DPMKFSFSEIQQATGDFSKE---------NLLGEGGFGHVYKGELK-DGQ---MIAAKVR 55
DP F+F + QA +F+KE ++G G FG V G LK G+ +A K
Sbjct: 8 DP--FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL 65
Query: 56 KEAST-QGFAEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNT 114
K T + +F SE ++ H NI+ L G K +++ EY+ N SL L N
Sbjct: 66 KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN- 124
Query: 115 ESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW 174
+ Q G G+++L + +HRD+ NIL+ + V + DFG++R
Sbjct: 125 DGRFTVIQLVGMLRGIGSGMKYLSDMS----AVHRDLAARNILVNSNLVCKVSDFGMSRV 180
Query: 175 KTTDDPVQTKILG---TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMS--GRKVVDMNG 229
D G + + APE + +DV+++GI++ ++MS R DM+
Sbjct: 181 LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 240
Query: 230 EEPQQSLRQ---WAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPS 286
++ +++ + P+ +ALH+L+ C Q+ RP
Sbjct: 241 QDVIKAIEEGYRLPPPMDCPIALHQLM--------------------LDCWQKERSDRPK 280
Query: 287 MGEVVRLLE 295
G++V +L+
Sbjct: 281 FGQIVNMLD 289
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 28/269 (10%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G +A K K+ S A F +E ++ +H+ +V L +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I+ EY+ N SL L + L ++ A A+G+ F+ E IHRD
Sbjct: 90 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 144
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL++ + DFGLAR +D T G + + APE G +I++D
Sbjct: 145 LRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 202
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL-HELIDPRIENSYDTYEL 266
V++FGI+L ++++ ++ P+ +I+ L + ++ P +N + EL
Sbjct: 203 VWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRP--DNCPE--EL 249
Query: 267 YLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
Y + + LC + PE RP+ + +LE
Sbjct: 250 YQLMR---LCWKERPEDRPTFDYLRSVLE 275
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 30/270 (11%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G +A K K+ S A F +E ++ +H+ +V L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I+ EY+ N SL L + L ++ A A+G+ F+ E IHRD
Sbjct: 80 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL++ + DFGLAR +D T G + + APE G +I++D
Sbjct: 135 LRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 208 VYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYE 265
V++FGI+L ++++ ++ M E Q+L + + ++ P +N + E
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER----------GYRMVRP--DNCPE--E 238
Query: 266 LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
LY + + LC + PE RP+ + +LE
Sbjct: 239 LYQLMR---LCWKERPEDRPTFDYLRSVLE 265
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 28/269 (10%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G +A K K+ S A F +E ++ +H+ +V L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I+ EY+ N SL L + L ++ A A+G+ F+ E IHRD
Sbjct: 80 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL++ + DFGLAR +D T G + + APE G +I++D
Sbjct: 135 LRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL-HELIDPRIENSYDTYEL 266
V++FGI+L ++++ ++ P+ +I+ L + ++ P +N + EL
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRP--DNCPE--EL 239
Query: 267 YLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
Y + + LC + PE RP+ + +LE
Sbjct: 240 YQLMR---LCWKERPEDRPTFDYLRSVLE 265
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G+G FG V G+ + ++ ++ +A+ Q F +E V+ RH N+V LLG +
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFL---AEASVMTQLRHSNLVQLLGVIVE 257
Query: 91 ENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHR 149
E + +V EY+ SL +L SVL ++ + + +L G +HR
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHR 313
Query: 150 DMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTD 207
D+ N+L++ D V + DFGL T + T+ G L + APE S ++D
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGL-----TKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 368
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L ++ S +V
Sbjct: 369 VWSFGILLWEIYSFGRV 385
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L T L Q A A G+ ++ +HRD
Sbjct: 334 EPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 388
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 389 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 447 VWSFGILLTELTTKGRV 463
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 30/270 (11%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G +A K K+ S A F +E ++ +H+ +V L +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I+ EY+ N SL L + L ++ A A+G+ F+ E IHRD
Sbjct: 81 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 135
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL++ + DFGLAR +D T G + + APE G +I++D
Sbjct: 136 LRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 208 VYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYE 265
V++FGI+L ++++ ++ M E Q+L + + ++ P +N + E
Sbjct: 194 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER----------GYRMVRP--DNCPE--E 239
Query: 266 LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
LY + + LC + PE RP+ + +LE
Sbjct: 240 LYQLMR---LCWKERPEDRPTFDYLRSVLE 266
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G+G FG V G+ + ++ ++ +A+ Q F +E V+ RH N+V LLG +
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFL---AEASVMTQLRHSNLVQLLGVIVE 70
Query: 91 ENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHR 149
E + +V EY+ SL +L SVL ++ + + +L G +HR
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHR 126
Query: 150 DMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTD 207
D+ N+L++ D V + DFGL T + T+ G L + APE S ++D
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGL-----TKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L ++ S +V
Sbjct: 182 VWSFGILLWEIYSFGRV 198
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 133/286 (46%), Gaps = 35/286 (12%)
Query: 32 GEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCKE 91
G FG V+K +L + +A K+ Q + + + E++ +H+N LL F E
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSW-QSEREIFSTPGMKHEN---LLQFIAAE 78
Query: 92 ----NLNI---LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE---C 141
NL + L+ + SL +L N ++ W++ A ++GL +LHE+ C
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGN---IITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 142 RG----GPIIHRDMRPSNILLTHDFVPMLGDFGLA-RWKTTDDPVQTK-ILGTLGYLAPE 195
RG I HRD + N+LL D +L DFGLA R++ P T +GT Y+APE
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 196 YAENGI-----VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQ--WAEPLIEKL- 247
E I +R D+YA G++L +L+S K D +E + P +E+L
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQ 255
Query: 248 --ALHELIDPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEV 290
+H+ + P I++ + + L + T C + E R S G V
Sbjct: 256 EVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSAGCV 301
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 107/234 (45%), Gaps = 42/234 (17%)
Query: 24 DFSKENL-----LGEGGFGHVYK----GELKDGQMI--AAKVRKEASTQGFAE-FQSEVY 71
+F +ENL LG G FG V G K G I A K+ KE + E SE+
Sbjct: 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 72 VLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTE--------------- 115
++ H+NIV LLG C L++EY C L +L E
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 116 ------SVLEWHQRYAAAIGTAKGLRFLH-EECRGGPIIHRDMRPSNILLTHDFVPMLGD 168
+VL + A AKG+ FL + C +HRD+ N+L+TH V + D
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC-----VHRDLAARNVLVTHGKVVKICD 215
Query: 169 FGLARWKTTDDP--VQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
FGLAR +D V+ + ++APE GI +I++DV+++GI+L ++ S
Sbjct: 216 FGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 30/270 (11%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G +A K K+ S A F +E ++ +H+ +V L +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I+ EY+ N SL L + L ++ A A+G+ F+ E IHRD
Sbjct: 85 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 139
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL++ + DFGLAR +D T G + + APE G +I++D
Sbjct: 140 LRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 208 VYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYE 265
V++FGI+L ++++ ++ M E Q+L + + ++ P +N + E
Sbjct: 198 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER----------GYRMVRP--DNCPE--E 243
Query: 266 LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
LY + + LC + PE RP+ + +LE
Sbjct: 244 LYQLMR---LCWKERPEDRPTFDYLRSVLE 270
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G +A K K T F E ++ +H +V L +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L D L+ A A G+ ++ IHRD
Sbjct: 76 EPIYI-VTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN----YIHRD 130
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + + + DFGLAR +D T G + + APE A G +I++D
Sbjct: 131 LRSANILVGNGLICKIADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 208 VYAFGIILLQLMSGRKV--VDMNGEEP-QQSLRQWAEPLIE--KLALHELIDPRIENSYD 262
V++FGI+L +L++ +V MN E +Q R + P + ++LHEL+
Sbjct: 189 VWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELM--------- 239
Query: 263 TYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
C +++PE RP+ + LE
Sbjct: 240 -----------IHCWKKDPEERPTFEYLQSFLE 261
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 135/294 (45%), Gaps = 51/294 (17%)
Query: 31 LGEGGFGHVYKGEL----KDGQMIAAKV-----RKEASTQGFAEFQSEVYVLN-FARHKN 80
LGEG FG V E KD KV + +A+ + ++ SE+ ++ +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHL-----------FD---NTESVLEWHQRYAA 126
I+ LLG C ++ ++ EY +L +L F+ N E L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 127 AIGTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI 185
A A+G+ +L ++C IHRD+ N+L+T D V + DFGLAR D +
Sbjct: 156 AYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 186 LGTL--GYLAPEYAENGIVSIRTDVYAFGIILLQL--MSGRKVVDMNGEEPQQSLRQWAE 241
G L ++APE + I + ++DV++FG++L ++ + G + EE + L++
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG-- 268
Query: 242 PLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
H + P S T ELY+M + + V P RP+ ++V L+
Sbjct: 269 --------HRMDKP----SNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLD 307
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 30/270 (11%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G +A K K+ S A F +E ++ +H+ +V L +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I+ EY+ N SL L + L ++ A A+G+ F+ E IHRD
Sbjct: 82 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 136
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL++ + DFGLAR +D T G + + APE G +I++D
Sbjct: 137 LRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 208 VYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYE 265
V++FGI+L ++++ ++ M E Q+L + + ++ P +N + E
Sbjct: 195 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER----------GYRMVRP--DNCPE--E 240
Query: 266 LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
LY + + LC + PE RP+ + +LE
Sbjct: 241 LYQLMR---LCWKERPEDRPTFDYLRSVLE 267
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G+G FG V G+ + ++ ++ +A+ Q F +E V+ RH N+V LLG +
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFL---AEASVMTQLRHSNLVQLLGVIVE 85
Query: 91 ENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHR 149
E + +V EY+ SL +L SVL ++ + + +L G +HR
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHR 141
Query: 150 DMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTD 207
D+ N+L++ D V + DFGL T + T+ G L + APE S ++D
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGL-----TKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 196
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L ++ S +V
Sbjct: 197 VWSFGILLWEIYSFGRV 213
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 26 SKENLLGEGGFGHVYKGE-LKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVML 84
SK +LG G FG V+K E G +AAK+ K + E ++E+ V+N H N++ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 85 LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQ-RYAAAIGTAKGLRFLHEECRG 143
+N +LV EY+ L + D + ++ E + I +G+R +H+
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI--CEGIRHMHQMY-- 207
Query: 144 GPIIHRDMRPSNILLTHDFVPMLG--DFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
I+H D++P NIL + + DFGLAR + ++ GT +LAPE
Sbjct: 208 --ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN-FGTPEFLAPEVVNYDF 264
Query: 202 VSIRTDVYAFGIILLQLMSG 221
VS TD+++ G+I L+SG
Sbjct: 265 VSFPTDMWSVGVIAYMLLSG 284
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 28/269 (10%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G +A K K+ S A F +E ++ +H+ +V L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I+ EY+ N SL L + L ++ A A+G+ F+ E IHRD
Sbjct: 86 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 140
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL++ + DFGLAR +D T G + + APE G +I++D
Sbjct: 141 LRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL-HELIDPRIENSYDTYEL 266
V++FGI+L ++++ ++ P+ +I+ L + ++ P +N + EL
Sbjct: 199 VWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRP--DNCPE--EL 245
Query: 267 YLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
Y + + LC + PE RP+ + +LE
Sbjct: 246 YQLMR---LCWKERPEDRPTFDYLRSVLE 271
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 29/236 (12%)
Query: 9 DPMKFSFSEIQQATGDFSKENL-----LGEGGFGHVYK----GELKDGQMIAAKVRKEAS 59
DP + ++E +F + NL LG G FG V + G K+ ++ V+ S
Sbjct: 31 DPTQLPYNE----KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS 86
Query: 60 TQGFAE---FQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTE 115
T E SE+ +++ +H+NIV LLG C +++ EY C L +
Sbjct: 87 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL-LNFLRRKS 145
Query: 116 SVLEWHQRYAAAIGTAKGLRFLHEECR---------GGPIIHRDMRPSNILLTHDFVPML 166
VLE +A A TA LH + IHRD+ N+LLT+ V +
Sbjct: 146 RVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI 205
Query: 167 GDFGLARWKTTDDP--VQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
GDFGLAR D V+ + ++APE + + ++++DV+++GI+L ++ S
Sbjct: 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L T L Q A A G+ ++ +HRD
Sbjct: 251 EPIYI-VGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM----NYVHRD 305
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 306 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 364 VWSFGILLTELTTKGRV 380
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 30/270 (11%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G +A K K+ S A F +E ++ +H+ +V L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I+ EY+ N SL L + L ++ A A+G+ F+ E IHRD
Sbjct: 80 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL++ + DFGLAR +D T G + + APE G +I++D
Sbjct: 135 LRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 208 VYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYE 265
V++FGI+L ++++ ++ M E Q+L + + ++ P +N + E
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER----------GYRMVRP--DNCPE--E 238
Query: 266 LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
LY + + LC + PE RP+ + +LE
Sbjct: 239 LYQLMR---LCWKERPEDRPTFDYLRSVLE 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 30/270 (11%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G +A K K+ S A F +E ++ +H+ +V L +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I+ EY+ N SL L + L ++ A A+G+ F+ E IHRD
Sbjct: 75 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 129
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL++ + DFGLAR +D T G + + APE G +I++D
Sbjct: 130 LRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 208 VYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYE 265
V++FGI+L ++++ ++ M E Q+L + + ++ P +N + E
Sbjct: 188 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG----------YRMVRP--DNCPE--E 233
Query: 266 LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
LY + + LC + PE RP+ + +LE
Sbjct: 234 LYQLMR---LCWKERPEDRPTFDYLRSVLE 260
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 19/218 (8%)
Query: 14 SFSEIQQATGDFSKENL------LGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFAEF 66
S + + T D + E+ LG+G FG VYK + K+ ++AA KV S + ++
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 67 QSEVYVLNFARHKNIVMLL-GFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYA 125
E+ +L H NIV LL F + NL IL+ E+ ++ + + E L Q
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLE-LERPLTESQIQV 139
Query: 126 AAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI 185
T L +LH+ IIHRD++ NIL T D L DFG++ T +
Sbjct: 140 VCKQTLDALNYLHD----NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSF 195
Query: 186 LGTLGYLAPEY-----AENGIVSIRTDVYAFGIILLQL 218
+GT ++APE +++ + DV++ GI L+++
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 19/218 (8%)
Query: 14 SFSEIQQATGDFSKENL------LGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFAEF 66
S + + T D + E+ LG+G FG VYK + K+ ++AA KV S + ++
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 67 QSEVYVLNFARHKNIVMLL-GFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYA 125
E+ +L H NIV LL F + NL IL+ E+ ++ + + E L Q
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLE-LERPLTESQIQV 139
Query: 126 AAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI 185
T L +LH+ IIHRD++ NIL T D L DFG++ T +
Sbjct: 140 VCKQTLDALNYLHD----NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 195
Query: 186 LGTLGYLAPEY-----AENGIVSIRTDVYAFGIILLQL 218
+GT ++APE +++ + DV++ GI L+++
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I++ EY+ SL L L Q A A G+ ++ +HRD
Sbjct: 85 EPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 140 LRAANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 19/218 (8%)
Query: 14 SFSEIQQATGDFSKENL------LGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFAEF 66
S + + T D + E+ LG+G FG VYK + K+ ++AA KV S + ++
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 67 QSEVYVLNFARHKNIVMLL-GFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYA 125
E+ +L H NIV LL F + NL IL+ E+ ++ + + E L Q
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLE-LERPLTESQIQV 139
Query: 126 AAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI 185
T L +LH+ IIHRD++ NIL T D L DFG++ T +
Sbjct: 140 VCKQTLDALNYLHD----NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXF 195
Query: 186 LGTLGYLAPEY-----AENGIVSIRTDVYAFGIILLQL 218
+GT ++APE +++ + DV++ GI L+++
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
D + ++ LG G +G VY+G K + +A K KE T EF E V+ +H N+V
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 318
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
LLG C +E ++ E++ +L +L + + A + + +L ++
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN- 377
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAEN 199
IHR++ N L+ + + + DFGL+R T D T G + + APE
Sbjct: 378 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAY 432
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI--DPRI 257
SI++DV+AFG++L ++ + G P P I+ ++EL+ D R+
Sbjct: 433 NKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDLSQVYELLEKDYRM 477
Query: 258 ENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E E +Y + + C Q NP RPS E+ + E
Sbjct: 478 ERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 513
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
D + ++ LG G +G VY+G K + +A K KE T EF E V+ +H N+V
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 279
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
LLG C +E ++ E++ +L +L + + A + + +L ++
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN- 338
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAEN 199
IHR++ N L+ + + + DFGL+R T D T G + + APE
Sbjct: 339 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAY 393
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI--DPRI 257
SI++DV+AFG++L ++ + G P P I+ ++EL+ D R+
Sbjct: 394 NKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDLSQVYELLEKDYRM 438
Query: 258 ENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E E +Y + + C Q NP RPS E+ + E
Sbjct: 439 ERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 474
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
D + ++ LG G +G VY+G K + +A K KE T EF E V+ +H N+V
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 276
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
LLG C +E ++ E++ +L +L + + A + + +L ++
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN- 335
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAEN 199
IHR++ N L+ + + + DFGL+R T D T G + + APE
Sbjct: 336 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAY 390
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI--DPRI 257
SI++DV+AFG++L ++ + G P P I+ ++EL+ D R+
Sbjct: 391 NKFSIKSDVWAFGVLLWEIAT-------YGMSPY--------PGIDLSQVYELLEKDYRM 435
Query: 258 ENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
E E +Y + + C Q NP RPS E+ + E
Sbjct: 436 ERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFE 471
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I++ EY+ SL L L Q A A G+ ++ +HRD
Sbjct: 85 EPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 140 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L T L Q + A G+ ++ +HRD
Sbjct: 82 EPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN----YVHRD 136
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 137 LRAANILVGENLVCKVADFGLAR--LIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 195 VWSFGILLTELTTKGRV 211
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L T L Q + A G+ ++ +HRD
Sbjct: 82 EPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN----YVHRD 136
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 137 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 195 VWSFGILLTELTTKGRV 211
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 40/286 (13%)
Query: 31 LGEGGFGHVYKGELKD-------GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY+G +D ++ V + AS + EF +E V+ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD----------NTESVLEWHQRYAAAIGTAKG 133
LLG K ++V E + + L +L L+ + AA I A G
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI--ADG 143
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGY 191
+ +L+ + +HR++ N ++ HDF +GDFG+ R ++T K L + +
Sbjct: 144 MAYLNAK----KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHE 251
+APE ++G+ + +D+++FG++L ++ S E+P Q L E +++ +
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSN--EQVLKFVMDGG 250
Query: 252 LIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
+D +L M C Q NP RP+ E+V LL+ +
Sbjct: 251 YLDQPDNCPERVTDLMRM------CWQFNPNMRPTFLEIVNLLKDD 290
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 63/300 (21%)
Query: 31 LGEGGFGHVYKGEL----KDGQMIAAKV-----RKEASTQGFAEFQSEVYVLN-FARHKN 80
LGEG FG V E KD KV + +A+ + ++ SE+ ++ +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHL--------------FDNTESVLEWHQRYAA 126
I+ LLG C ++ ++ EY +L +L N E L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 127 AIGTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--------WKTT 177
A A+G+ +L ++C IHRD+ N+L+T D V + DFGLAR KTT
Sbjct: 156 AYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 178 DDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQL--MSGRKVVDMNGEEPQQS 235
+ + K ++APE + I + ++DV++FG++L ++ + G + EE +
Sbjct: 211 NGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 236 LRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
L++ H + P S T ELY+M + + V P RP+ ++V L+
Sbjct: 265 LKEG----------HRMDKP----SNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLD 307
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 63/300 (21%)
Query: 31 LGEGGFGHVYKGEL----KDGQMIAAKV-----RKEASTQGFAEFQSEVYVLN-FARHKN 80
LGEG FG V E KD KV + +A+ + ++ SE+ ++ +HKN
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHL--------------FDNTESVLEWHQRYAA 126
I+ LLG C ++ ++ EY +L +L N E L +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 127 AIGTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--------WKTT 177
A A+G+ +L ++C IHRD+ N+L+T D V + DFGLAR KTT
Sbjct: 149 AYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 178 DDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQL--MSGRKVVDMNGEEPQQS 235
+ + K ++APE + I + ++DV++FG++L ++ + G + EE +
Sbjct: 204 NGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 257
Query: 236 LRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
L++ H + P S T ELY+M + + V P RP+ ++V L+
Sbjct: 258 LKEG----------HRMDKP----SNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLD 300
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 63/300 (21%)
Query: 31 LGEGGFGHVYKGEL----KDGQMIAAKV-----RKEASTQGFAEFQSEVYVLN-FARHKN 80
LGEG FG V E KD KV + +A+ + ++ SE+ ++ +HKN
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHL--------------FDNTESVLEWHQRYAA 126
I+ LLG C ++ ++ EY +L +L N E L +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 127 AIGTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--------WKTT 177
A A+G+ +L ++C IHRD+ N+L+T D V + DFGLAR KTT
Sbjct: 148 AYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 178 DDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQL--MSGRKVVDMNGEEPQQS 235
+ + K ++APE + I + ++DV++FG++L ++ + G + EE +
Sbjct: 203 NGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 256
Query: 236 LRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
L++ H + P S T ELY+M + + V P RP+ ++V L+
Sbjct: 257 LKEG----------HRMDKP----SNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLD 299
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 63/300 (21%)
Query: 31 LGEGGFGHVYKGEL----KDGQMIAAKV-----RKEASTQGFAEFQSEVYVLN-FARHKN 80
LGEG FG V E KD KV + +A+ + ++ SE+ ++ +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHL--------------FDNTESVLEWHQRYAA 126
I+ LLG C ++ ++ EY +L +L N E L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 127 AIGTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--------WKTT 177
A A+G+ +L ++C IHRD+ N+L+T D V + DFGLAR KTT
Sbjct: 156 AYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 178 DDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQL--MSGRKVVDMNGEEPQQS 235
+ + K ++APE + I + ++DV++FG++L ++ + G + EE +
Sbjct: 211 NGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 236 LRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
L++ H + P S T ELY+M + + V P RP+ ++V L+
Sbjct: 265 LKEG----------HRMDKP----SNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLD 307
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L L Q A A G+ ++ +HRD
Sbjct: 76 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 130
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 131 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 189 VWSFGILLTELTTKGRV 205
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 63/300 (21%)
Query: 31 LGEGGFGHVYKGEL----KDGQMIAAKV-----RKEASTQGFAEFQSEVYVLN-FARHKN 80
LGEG FG V E KD KV + +A+ + ++ SE+ ++ +HKN
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHL--------------FDNTESVLEWHQRYAA 126
I+ LLG C ++ ++ EY +L +L N E L +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 127 AIGTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--------WKTT 177
A A+G+ +L ++C IHRD+ N+L+T D V + DFGLAR KTT
Sbjct: 141 AYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 178 DDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQL--MSGRKVVDMNGEEPQQS 235
+ + K ++APE + I + ++DV++FG++L ++ + G + EE +
Sbjct: 196 NGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 249
Query: 236 LRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
L++ H + P S T ELY+M + + V P RP+ ++V L+
Sbjct: 250 LKEG----------HRMDKP----SNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLD 292
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 63/300 (21%)
Query: 31 LGEGGFGHVYKGEL----KDGQMIAAKV-----RKEASTQGFAEFQSEVYVLN-FARHKN 80
LGEG FG V E KD KV + +A+ + ++ SE+ ++ +HKN
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHL--------------FDNTESVLEWHQRYAA 126
I+ LLG C ++ ++ EY +L +L N E L +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 127 AIGTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--------WKTT 177
A A+G+ +L ++C IHRD+ N+L+T D V + DFGLAR KTT
Sbjct: 145 AYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 178 DDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQL--MSGRKVVDMNGEEPQQS 235
+ + K ++APE + I + ++DV++FG++L ++ + G + EE +
Sbjct: 200 NGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 253
Query: 236 LRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
L++ H + P S T ELY+M + + V P RP+ ++V L+
Sbjct: 254 LKEG----------HRMDKP----SNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLD 296
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 40/286 (13%)
Query: 31 LGEGGFGHVYKGELKD-------GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY+G +D ++ V + AS + EF +E V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD----------NTESVLEWHQRYAAAIGTAKG 133
LLG K ++V E + + L +L L+ + AA I A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI--ADG 142
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGY 191
+ +L+ + +HR++ N ++ HDF +GDFG+ R ++T K L + +
Sbjct: 143 MAYLNAK----KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHE 251
+APE ++G+ + +D+++FG++L ++ S E+P Q L E +++ +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSN--EQVLKFVMDGG 249
Query: 252 LIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
+D +L M C Q NP RP+ E+V LL+ +
Sbjct: 250 YLDQPDNCPERVTDLMRM------CWQFNPNMRPTFLEIVNLLKDD 289
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L L Q A A G+ ++ +HRD
Sbjct: 74 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 128
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 129 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 187 VWSFGILLTELTTKGRV 203
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 37/240 (15%)
Query: 9 DPMKFSFSEIQQATGDFSKENL-----LGEGGFGHVYK----GELKDGQMIAAKVRKEAS 59
DP + ++E +F + NL LG G FG V + G K+ ++ V+ S
Sbjct: 31 DPTQLPYNE----KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS 86
Query: 60 TQGFAE---FQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTE 115
T E SE+ +++ +H+NIV LLG C +++ EY C L +
Sbjct: 87 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL-LNFLRRKS 145
Query: 116 SVLEWHQRYAAAIGT-------------AKGLRFLHEECRGGPIIHRDMRPSNILLTHDF 162
VLE +A A T A+G+ FL + IHRD+ N+LLT+
Sbjct: 146 RVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK----NCIHRDVAARNVLLTNGH 201
Query: 163 VPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
V +GDFGLAR D V+ + ++APE + + ++++DV+++GI+L ++ S
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 63/300 (21%)
Query: 31 LGEGGFGHVYKGEL----KDGQMIAAKV-----RKEASTQGFAEFQSEVYVLN-FARHKN 80
LGEG FG V E KD KV + +A+ + ++ SE+ ++ +HKN
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHL--------------FDNTESVLEWHQRYAA 126
I+ LLG C ++ ++ EY +L +L N E L +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 127 AIGTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--------WKTT 177
A A+G+ +L ++C IHRD+ N+L+T D V + DFGLAR KTT
Sbjct: 197 AYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 178 DDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQL--MSGRKVVDMNGEEPQQS 235
+ + K ++APE + I + ++DV++FG++L ++ + G + EE +
Sbjct: 252 NGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 305
Query: 236 LRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
L++ H + P S T ELY+M + + V P RP+ ++V L+
Sbjct: 306 LKEG----------HRMDKP----SNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLD 348
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 63/300 (21%)
Query: 31 LGEGGFGHVYKGEL----KDGQMIAAKV-----RKEASTQGFAEFQSEVYVLN-FARHKN 80
LGEG FG V E KD KV + +A+ + ++ SE+ ++ +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHL--------------FDNTESVLEWHQRYAA 126
I+ LLG C ++ ++ EY +L +L N E L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 127 AIGTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--------WKTT 177
A A+G+ +L ++C IHRD+ N+L+T D V + DFGLAR KTT
Sbjct: 156 AYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 178 DDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQL--MSGRKVVDMNGEEPQQS 235
+ + K ++APE + I + ++DV++FG++L ++ + G + EE +
Sbjct: 211 NGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 236 LRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
L++ H + P S T ELY+M + + V P RP+ ++V L+
Sbjct: 265 LKEG----------HRMDKP----SNCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLD 307
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L L Q A A G+ ++ +HRD
Sbjct: 85 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 140 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L L Q A A G+ ++ +HRD
Sbjct: 85 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 140 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 131/299 (43%), Gaps = 51/299 (17%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKE---ASTQGFAEFQSEVYVL-NFARH 78
D ++++GEG FG V K +K DG + A +++ AS +F E+ VL H
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 85
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSL--------------HWHLFDNTESVLEWHQRY 124
NI+ LLG C L EY + +L + + ++T S L Q
Sbjct: 86 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 125 AAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTK 184
A A+G+ +L ++ IHRD+ NIL+ ++V + DFGL+R + K
Sbjct: 146 HFAADVARGMDYLSQK----QFIHRDLAARNILVGENYVAKIADFGLSRGQEV---YVKK 198
Query: 185 ILGTLG--YLAPEYAENGIVSIRTDVYAFGIILLQLMS--GRKVVDMNGEEPQQSLRQWA 240
+G L ++A E + + +DV+++G++L +++S G M E
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--------- 249
Query: 241 EPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV----RLLE 295
L EKL ++ + + Y+L C + P RPS +++ R+LE
Sbjct: 250 --LYEKLPQGYRLEKPLNCDDEVYDLMRQ------CWREKPYERPSFAQILVSLNRMLE 300
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L L Q A A G+ ++ +HRD
Sbjct: 85 EPIYI-VCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 140 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 131/299 (43%), Gaps = 51/299 (17%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKE---ASTQGFAEFQSEVYVL-NFARH 78
D ++++GEG FG V K +K DG + A +++ AS +F E+ VL H
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 75
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSL--------------HWHLFDNTESVLEWHQRY 124
NI+ LLG C L EY + +L + + ++T S L Q
Sbjct: 76 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 125 AAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTK 184
A A+G+ +L ++ IHRD+ NIL+ ++V + DFGL+R + K
Sbjct: 136 HFAADVARGMDYLSQK----QFIHRDLAARNILVGENYVAKIADFGLSRGQEV---YVKK 188
Query: 185 ILGTLG--YLAPEYAENGIVSIRTDVYAFGIILLQLMS--GRKVVDMNGEEPQQSLRQWA 240
+G L ++A E + + +DV+++G++L +++S G M E
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--------- 239
Query: 241 EPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV----RLLE 295
L EKL ++ + + Y+L C + P RPS +++ R+LE
Sbjct: 240 --LYEKLPQGYRLEKPLNCDDEVYDLMRQ------CWREKPYERPSFAQILVSLNRMLE 290
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 59/325 (18%)
Query: 8 KDPMKFSFSEIQ---QATGDFSKENL-----LGEGGFGHVYKGEL--------KDGQMIA 51
+DPM SE + +F ++ L LGEG FG V E K+ +A
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 52 AKVRKEASTQ-GFAEFQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWH 109
K+ K+ +T+ ++ SE+ ++ +HKNI+ LLG C ++ ++ EY +L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 110 L-----------FDNT---ESVLEWHQRYAAAIGTAKGLRFL-HEECRGGPIIHRDMRPS 154
L +D E + + + A+G+ +L ++C IHRD+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDLAAR 186
Query: 155 NILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTDVYAFG 212
N+L+T + V + DFGLAR D + G L ++APE + + + ++DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 213 IILLQL--MSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMA 270
+++ ++ + G + EE + L++ H + P + T ELY+M
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELFKLLKEG----------HRMDKP----ANCTNELYMMM 292
Query: 271 KTAYLCVQRNPEGRPSMGEVVRLLE 295
+ + V P RP+ ++V L+
Sbjct: 293 RDCWHAV---PSQRPTFKQLVEDLD 314
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 34/280 (12%)
Query: 28 ENLLGEGGFGHVYKGELKDG----QMIAAKVRKEASTQ-GFAEFQSEVYVLNFARHKNIV 82
E ++G G FG V +G LK +A K K T+ EF SE ++ H NI+
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 83 MLLGFCCKENLNILVYEYICNKSLH--WHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L G +++ E++ N +L L D +V+ Q G A G+R+L E
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLAEM 137
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW--KTTDDPVQTKILG---TLGYLAPE 195
+HRD+ NIL+ + V + DFGL+R+ + + DP +T LG + + APE
Sbjct: 138 S----YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 196 YAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDP 255
+ +D +++GI++ ++MS GE P + + +I + + P
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSF-------GERPYWDMSN--QDVINAIEQDYRLPP 244
Query: 256 RIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ ++L L C Q++ RP +VV L+
Sbjct: 245 PPDCPTSLHQLMLD------CWQKDRNARPRFPQVVSALD 278
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 59/325 (18%)
Query: 8 KDPMKFSFSEIQ---QATGDFSKENL-----LGEGGFGHVYKGEL--------KDGQMIA 51
+DPM SE + +F ++ L LGEG FG V E K+ +A
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 52 AKVRKEASTQ-GFAEFQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWH 109
K+ K+ +T+ ++ SE+ ++ +HKNI+ LLG C ++ ++ EY +L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 110 L-----------FDNT---ESVLEWHQRYAAAIGTAKGLRFL-HEECRGGPIIHRDMRPS 154
L +D E + + + A+G+ +L ++C IHRD+
Sbjct: 132 LRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDLAAR 186
Query: 155 NILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTDVYAFG 212
N+L+T + V + DFGLAR D + G L ++APE + + + ++DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 213 IILLQL--MSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMA 270
+++ ++ + G + EE + L++ H + P + T ELY+M
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELFKLLKEG----------HRMDKP----ANCTNELYMMM 292
Query: 271 KTAYLCVQRNPEGRPSMGEVVRLLE 295
+ + V P RP+ ++V L+
Sbjct: 293 RDCWHAV---PSQRPTFKQLVEDLD 314
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 128/270 (47%), Gaps = 30/270 (11%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G +A K K+ S A F +E ++ +H+ +V L +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I+ EY+ N SL L + L ++ A A+G+ F+ E IHR+
Sbjct: 76 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRN 130
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL++ + DFGLAR +D T G + + APE G +I++D
Sbjct: 131 LRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 208 VYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYE 265
V++FGI+L ++++ ++ M E Q+L + + ++ P +N + E
Sbjct: 189 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG----------YRMVRP--DNCPE--E 234
Query: 266 LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
LY + + LC + PE RP+ + +LE
Sbjct: 235 LYQLMR---LCWKERPEDRPTFDYLRSVLE 261
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 59/325 (18%)
Query: 8 KDPMKFSFSEIQ---QATGDFSKENL-----LGEGGFGHVYKGEL--------KDGQMIA 51
+DPM SE + +F ++ L LGEG FG V E K+ +A
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 52 AKVRKEASTQ-GFAEFQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWH 109
K+ K+ +T+ ++ SE+ ++ +HKNI+ LLG C ++ ++ EY +L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 110 L-----------FDNT---ESVLEWHQRYAAAIGTAKGLRFL-HEECRGGPIIHRDMRPS 154
L +D E + + + A+G+ +L ++C IHRD+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDLAAR 186
Query: 155 NILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTDVYAFG 212
N+L+T + V + DFGLAR D + G L ++APE + + + ++DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 213 IILLQL--MSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMA 270
+++ ++ + G + EE + L++ H + P + T ELY+M
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELFKLLKEG----------HRMDKP----ANCTNELYMMM 292
Query: 271 KTAYLCVQRNPEGRPSMGEVVRLLE 295
+ + V P RP+ ++V L+
Sbjct: 293 RDCWHAV---PSQRPTFKQLVEDLD 314
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 127/270 (47%), Gaps = 30/270 (11%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G G V+ G +A K K+ S A F +E ++ +H+ +V L +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I+ EY+ N SL L + L ++ A A+G+ F+ E IHRD
Sbjct: 80 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL++ + DFGLAR +D T G + + APE G +I++D
Sbjct: 135 LRAANILVSDTLSCKIADFGLAR--LIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 208 VYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYE 265
V++FGI+L ++++ ++ M E Q+L + + ++ P +N + E
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER----------GYRMVRP--DNCPE--E 238
Query: 266 LYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
LY + + LC + PE RP+ + +LE
Sbjct: 239 LYQLMR---LCWKERPEDRPTFDYLRSVLE 265
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 59/325 (18%)
Query: 8 KDPMKFSFSEIQ---QATGDFSKENL-----LGEGGFGHVYKGEL--------KDGQMIA 51
+DPM SE + +F ++ L LGEG FG V E K+ +A
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 52 AKVRKEASTQ-GFAEFQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWH 109
K+ K+ +T+ ++ SE+ ++ +HKNI+ LLG C ++ ++ EY +L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 110 L-----------FDNT---ESVLEWHQRYAAAIGTAKGLRFL-HEECRGGPIIHRDMRPS 154
L +D E + + + A+G+ +L ++C IHRD+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDLAAR 186
Query: 155 NILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTDVYAFG 212
N+L+T + V + DFGLAR D + G L ++APE + + + ++DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 213 IILLQL--MSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMA 270
+++ ++ + G + EE + L++ H + P + T ELY+M
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELFKLLKEG----------HRMDKP----ANCTNELYMMM 292
Query: 271 KTAYLCVQRNPEGRPSMGEVVRLLE 295
+ + V P RP+ ++V L+
Sbjct: 293 RDCWHAV---PSQRPTFKQLVEDLD 314
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 59/325 (18%)
Query: 8 KDPMKFSFSEIQ---QATGDFSKENL-----LGEGGFGHVYKGEL--------KDGQMIA 51
+DPM SE + +F ++ L LGEG FG V E K+ +A
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 52 AKVRKEASTQ-GFAEFQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWH 109
K+ K+ +T+ ++ SE+ ++ +HKNI+ LLG C ++ ++ EY +L +
Sbjct: 72 VKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 110 L-----------FDNT---ESVLEWHQRYAAAIGTAKGLRFL-HEECRGGPIIHRDMRPS 154
L +D E + + + A+G+ +L ++C IHRD+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDLAAR 186
Query: 155 NILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTDVYAFG 212
N+L+T + V + DFGLAR D + G L ++APE + + + ++DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 213 IILLQL--MSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMA 270
+++ ++ + G + EE + L++ H + P + T ELY+M
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELFKLLKEG----------HRMDKP----ANCTNELYMMM 292
Query: 271 KTAYLCVQRNPEGRPSMGEVVRLLE 295
+ + V P RP+ ++V L+
Sbjct: 293 RDCWHAV---PSQRPTFKQLVEDLD 314
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ L L L Q A A G+ ++ +HRD
Sbjct: 85 EPIYI-VMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 140 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 34/280 (12%)
Query: 28 ENLLGEGGFGHVYKGELKDG----QMIAAKVRKEASTQ-GFAEFQSEVYVLNFARHKNIV 82
E ++G G FG V +G LK +A K K T+ EF SE ++ H NI+
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 83 MLLGFCCKENLNILVYEYICNKSLH--WHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L G +++ E++ N +L L D +V+ Q G A G+R+L E
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLAEM 135
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW--KTTDDPVQTKILG---TLGYLAPE 195
+HRD+ NIL+ + V + DFGL+R+ + + DP T LG + + APE
Sbjct: 136 S----YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 196 YAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDP 255
+ +D +++GI++ ++MS GE P + + +I + + P
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMS-------FGERPYWDMSN--QDVINAIEQDYRLPP 242
Query: 256 RIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ ++L L C Q++ RP +VV L+
Sbjct: 243 PPDCPTSLHQLMLD------CWQKDRNARPRFPQVVSALD 276
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 59/325 (18%)
Query: 8 KDPMKFSFSEIQ---QATGDFSKENL-----LGEGGFGHVYKGEL--------KDGQMIA 51
+DPM SE + +F ++ L LGEG FG V E K+ +A
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 52 AKVRKEASTQ-GFAEFQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWH 109
K+ K+ +T+ ++ SE+ ++ +HKNI+ LLG C ++ ++ EY +L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 110 L-----------FDNT---ESVLEWHQRYAAAIGTAKGLRFL-HEECRGGPIIHRDMRPS 154
L +D E + + + A+G+ +L ++C IHRD+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDLAAR 186
Query: 155 NILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTDVYAFG 212
N+L+T + V + DFGLAR D + G L ++APE + + + ++DV++FG
Sbjct: 187 NVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 213 IILLQL--MSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMA 270
+++ ++ + G + EE + L++ H + P + T ELY+M
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELFKLLKEG----------HRMDKP----ANCTNELYMMM 292
Query: 271 KTAYLCVQRNPEGRPSMGEVVRLLE 295
+ + V P RP+ ++V L+
Sbjct: 293 RDCWHAV---PSQRPTFKQLVEDLD 314
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 59/325 (18%)
Query: 8 KDPMKFSFSEIQ---QATGDFSKENL-----LGEGGFGHVYKGEL--------KDGQMIA 51
+DPM SE + +F ++ L LGEG FG V E K+ +A
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 52 AKVRKEASTQ-GFAEFQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWH 109
K+ K+ +T+ ++ SE+ ++ +HKNI+ LLG C ++ ++ EY +L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 110 L-----------FDNT---ESVLEWHQRYAAAIGTAKGLRFL-HEECRGGPIIHRDMRPS 154
L +D E + + + A+G+ +L ++C IHRD+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDLAAR 186
Query: 155 NILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTDVYAFG 212
N+L+T + V + DFGLAR D + G L ++APE + + + ++DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 213 IILLQL--MSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMA 270
+++ ++ + G + EE + L++ H + P + T ELY+M
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELFKLLKEG----------HRMDKP----ANCTNELYMMM 292
Query: 271 KTAYLCVQRNPEGRPSMGEVVRLLE 295
+ + V P RP+ ++V L+
Sbjct: 293 RDCWHAV---PSQRPTFKQLVEDLD 314
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ L L L Q A A G+ ++ +HRD
Sbjct: 85 EPIYI-VTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 140 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 28/272 (10%)
Query: 28 ENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
E LG G FG V+ +A K K S A F +E V+ +H +V L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV 251
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPII 147
KE + I+ E++ SL L + S + + A+G+ F+ + I
Sbjct: 252 VTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN----YI 306
Query: 148 HRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSI 204
HRD+R +NIL++ V + DFGLAR +D T G + + APE G +I
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 364
Query: 205 RTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTY 264
++DV++FGI+L+++++ G P + + P + + PR EN +
Sbjct: 365 KSDVWSFGILLMEIVT-------YGRIPYPGM---SNPEVIRALERGYRMPRPENCPE-- 412
Query: 265 ELY-LMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
ELY +M + C + PE RP+ + +L+
Sbjct: 413 ELYNIMMR----CWKNRPEERPTFEYIQSVLD 440
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 127/299 (42%), Gaps = 56/299 (18%)
Query: 31 LGEGGFGHVYK----GELKDGQMIAAKVRKEASTQGFAE---FQSEVYVLNF-ARHKNIV 82
LG G FG V + G +K + V+ + E SE+ VL++ H NIV
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI-------------- 128
LLG C +++ EY C L L +S + + + AI
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI--CSKTSPAIMEDDELALDLEDLL 171
Query: 129 ----GTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQT 183
AKG+ FL + C IHRD+ NILLTH + + DFGLAR D
Sbjct: 172 SFSYQVAKGMAFLASKNC-----IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVV 226
Query: 184 KILGTL--GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
K L ++APE N + + +DV+++GI L +L S G P +
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-------LGSSPYPGM----- 274
Query: 242 PLIEKLALHELIDP---RIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
P+ K +++I + + E+Y + KT C +P RP+ ++V+L+E +
Sbjct: 275 PVDSK--FYKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIEKQ 328
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 28 ENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
E LG G FG V+ +A K K S A F +E V+ +H +V L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV 78
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPII 147
KE + I+ E++ SL L + S + + A+G+ F+ + I
Sbjct: 79 VTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN----YI 133
Query: 148 HRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSI 204
HRD+R +NIL++ V + DFGLAR +D T G + + APE G +I
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 191
Query: 205 RTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTY 264
++DV++FGI+L+++++ ++ P+ +I L + PR EN +
Sbjct: 192 KSDVWSFGILLMEIVTYGRIPYPGMSNPE---------VIRALERGYRM-PRPENCPE-- 239
Query: 265 ELY-LMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
ELY +M + C + PE RP+ + +L+
Sbjct: 240 ELYNIMMR----CWKNRPEERPTFEYIQSVLD 267
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 25/268 (9%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G + +A K K T F E ++ +H +V L +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E ++ EY+ SL L + + + + A+G+ ++ + IHRD
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN----YIHRD 135
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +N+L++ + + DFGLAR +D T G + + APE G +I++D
Sbjct: 136 LRAANVLVSESLMCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELY 267
V++FGI+L ++++ K+ P ++ L + + PR+EN D ELY
Sbjct: 194 VWSFGILLYEIVTYGKI-----PYPGRTNADVMTALSQGYRM-----PRVENCPD--ELY 241
Query: 268 LMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ K +C + E RP+ + +L+
Sbjct: 242 DIMK---MCWKEKAEERPTFDYLQSVLD 266
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 131/299 (43%), Gaps = 51/299 (17%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKE---ASTQGFAEFQSEVYVL-NFARH 78
D ++++GEG FG V K +K DG + A +++ AS +F E+ VL H
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 82
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSL--------------HWHLFDNTESVLEWHQRY 124
NI+ LLG C L EY + +L + + ++T S L Q
Sbjct: 83 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 142
Query: 125 AAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTK 184
A A+G+ +L ++ IHR++ NIL+ ++V + DFGL+R + K
Sbjct: 143 HFAADVARGMDYLSQK----QFIHRNLAARNILVGENYVAKIADFGLSRGQEV---YVKK 195
Query: 185 ILGTLG--YLAPEYAENGIVSIRTDVYAFGIILLQLMS--GRKVVDMNGEEPQQSLRQWA 240
+G L ++A E + + +DV+++G++L +++S G M E
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--------- 246
Query: 241 EPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV----RLLE 295
L EKL ++ + + Y+L C + P RPS +++ R+LE
Sbjct: 247 --LYEKLPQGYRLEKPLNCDDEVYDLMRQ------CWREKPYERPSFAQILVSLNRMLE 297
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 131/294 (44%), Gaps = 43/294 (14%)
Query: 24 DFSKENLLGEGGFGHVYKGEL------KDGQMIAAKVRKEASTQGFAEFQSEVYVLNFAR 77
D + LGEG FG V+ E KD ++A K K+ + +FQ E +L +
Sbjct: 16 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ 75
Query: 78 HKNIVMLLGFCCKENLNILVYEYI----CNKSLHWHLFD----------NTESVLEWHQR 123
H++IV G C + I+V+EY+ NK L H D + L Q
Sbjct: 76 HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQM 135
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPV 181
A A G+ +L + +HRD+ N L+ + + +GDFG++R + T V
Sbjct: 136 LHIASQIASGMVYLASQ----HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV 191
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
+ + ++ PE + +DV++FG+IL ++ + G++P L
Sbjct: 192 GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT-------YGKQPWFQLSN--T 242
Query: 242 PLIEKLALHELID-PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLL 294
+IE + +++ PR+ + Y++ L C QR P+ R ++ E+ ++L
Sbjct: 243 EVIECITQGRVLERPRV-CPKEVYDVMLG------CWQREPQQRLNIKEIYKIL 289
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 127/286 (44%), Gaps = 36/286 (12%)
Query: 28 ENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
E LG G FG V+ +A K K S A F +E V+ +H +V L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV 245
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPII 147
KE + I+ E++ SL L + S + + A+G+ F+ + I
Sbjct: 246 VTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN----YI 300
Query: 148 HRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTD 207
HRD+R +NIL++ V + DFGLAR V K + + APE G +I++D
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLAR-------VGAKF--PIKWTAPEAINFGSFTIKSD 351
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELY 267
V++FGI+L+++++ ++ P+ +I L + PR EN + ELY
Sbjct: 352 VWSFGILLMEIVTYGRIPYPGMSNPE---------VIRALERGYRM-PRPENCPE--ELY 399
Query: 268 -LMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDRFHHLGEKFVQRH 312
+M + C + PE RP+ + +L D F+ E Q+
Sbjct: 400 NIMMR----CWKNRPEERPTFEYIQSVL----DDFYTATESQXQQQ 437
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
D + ++ LG G +G VY G K + +A K KE T EF E V+ +H N+V
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 91
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD-NTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
LLG C E +V EY+ +L +L + N E V Y A + + +L ++
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMAT-QISSAMEYLEKK- 149
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAE 198
IHRD+ N L+ + V + DFGL+R T D T G + + APE
Sbjct: 150 ---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLA 204
Query: 199 NGIVSIRTDVYAFGIILLQLMS 220
SI++DV+AFG++L ++ +
Sbjct: 205 YNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 31/235 (13%)
Query: 9 DPMKFSFSEIQQATGDFSKENL-----LGEGGFGHVYK----GELKDGQMIAAKVRKEAS 59
DP + ++E +F + NL LG G FG V + G K+ ++ V+ S
Sbjct: 31 DPTQLPYNE----KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS 86
Query: 60 TQGFAE---FQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTE 115
T E SE+ +++ +H+NIV LLG C +++ EY C L L E
Sbjct: 87 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAE 146
Query: 116 S--------VLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLG 167
+ LE + A+G+ FL + IHRD+ N+LLT+ V +G
Sbjct: 147 ADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK----NCIHRDVAARNVLLTNGHVAKIG 202
Query: 168 DFGLARWKTTDDP--VQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
DFGLAR D V+ + ++APE + + ++++DV+++GI+L ++ S
Sbjct: 203 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L L Q A A G+ ++ +HRD
Sbjct: 252 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 306
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +NIL+ + V + DFGL R +D T G + + APE A G +I++D
Sbjct: 307 LRAANILVGENLVCKVADFGLGR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 364
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 365 VWSFGILLTELTTKGRV 381
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 127/299 (42%), Gaps = 56/299 (18%)
Query: 31 LGEGGFGHVYK----GELKDGQMIAAKVRKEASTQGFAE---FQSEVYVLNF-ARHKNIV 82
LG G FG V + G +K + V+ + E SE+ VL++ H NIV
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI-------------- 128
LLG C +++ EY C L L +S + + + AI
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI--CSKTSPAIMEDDELALDLEDLL 164
Query: 129 ----GTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQT 183
AKG+ FL + C IHRD+ NILLTH + + DFGLAR D
Sbjct: 165 SFSYQVAKGMAFLASKNC-----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 219
Query: 184 KILGTL--GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
K L ++APE N + + +DV+++GI L +L S G P +
Sbjct: 220 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL-------GSSPYPGM----- 267
Query: 242 PLIEKLALHELIDP---RIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
P+ K +++I + + E+Y + KT C +P RP+ ++V+L+E +
Sbjct: 268 PVDSK--FYKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIEKQ 321
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 127/299 (42%), Gaps = 56/299 (18%)
Query: 31 LGEGGFGHVYK----GELKDGQMIAAKVRKEASTQGFAE---FQSEVYVLNF-ARHKNIV 82
LG G FG V + G +K + V+ + E SE+ VL++ H NIV
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI-------------- 128
LLG C +++ EY C L L +S + + + AI
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI--CSKTSPAIMEDDELALDLEDLL 166
Query: 129 ----GTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQT 183
AKG+ FL + C IHRD+ NILLTH + + DFGLAR D
Sbjct: 167 SFSYQVAKGMAFLASKNC-----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 221
Query: 184 KILGTL--GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
K L ++APE N + + +DV+++GI L +L S G P +
Sbjct: 222 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL-------GSSPYPGM----- 269
Query: 242 PLIEKLALHELIDP---RIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
P+ K +++I + + E+Y + KT C +P RP+ ++V+L+E +
Sbjct: 270 PVDSK--FYKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIEKQ 323
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 126/298 (42%), Gaps = 54/298 (18%)
Query: 31 LGEGGFGHVYK----GELKDGQMIAAKVRKEASTQGFAE---FQSEVYVLNF-ARHKNIV 82
LG G FG V + G +K + V+ + E SE+ VL++ H NIV
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI-------------- 128
LLG C +++ EY C L L +S + + + AI
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI--CSKTSPAIMEDDELALDLEDLL 148
Query: 129 ----GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTK 184
AKG+ FL + IHRD+ NILLTH + + DFGLAR D K
Sbjct: 149 SFSYQVAKGMAFLASK----NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 185 ILGTL--GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEP 242
L ++APE N + + +DV+++GI L +L S G P + P
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-------LGSSPYPGM-----P 252
Query: 243 LIEKLALHELIDP---RIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
+ K +++I + + E+Y + KT C +P RP+ ++V+L+E +
Sbjct: 253 VDSK--FYKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIEKQ 305
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG+G FG V+ G +A K K + A F E V+ RH+ +V L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E + I V EY+ SL L L Q A A G+ ++ +HRD
Sbjct: 85 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+ +NIL+ + V + DFGLAR +D T G + + APE A G +I++D
Sbjct: 140 LAAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 208 VYAFGIILLQLMSGRKV 224
V++FGI+L +L + +V
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 127/299 (42%), Gaps = 56/299 (18%)
Query: 31 LGEGGFGHVYK----GELKDGQMIAAKVRKEASTQGFAE---FQSEVYVLNF-ARHKNIV 82
LG G FG V + G +K + V+ + E SE+ VL++ H NIV
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI-------------- 128
LLG C +++ EY C L L +S + + + AI
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI--CSKTSPAIMEDDELALDLEDLL 171
Query: 129 ----GTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQT 183
AKG+ FL + C IHRD+ NILLTH + + DFGLAR D
Sbjct: 172 SFSYQVAKGMAFLASKNC-----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 226
Query: 184 KILGTL--GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
K L ++APE N + + +DV+++GI L +L S G P +
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-------LGSSPYPGM----- 274
Query: 242 PLIEKLALHELIDP---RIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
P+ K +++I + + E+Y + KT C +P RP+ ++V+L+E +
Sbjct: 275 PVDSK--FYKMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIEKQ 328
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 31/235 (13%)
Query: 9 DPMKFSFSEIQQATGDFSKENL-----LGEGGFGHVYK----GELKDGQMIAAKVRKEAS 59
DP + ++E +F + NL LG G FG V + G K+ ++ V+ S
Sbjct: 23 DPTQLPYNE----KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS 78
Query: 60 TQGFAE---FQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTE 115
T E SE+ +++ +H+NIV LLG C +++ EY C L L E
Sbjct: 79 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAE 138
Query: 116 S--------VLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLG 167
+ LE + A+G+ FL + IHRD+ N+LLT+ V +G
Sbjct: 139 ADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK----NCIHRDVAARNVLLTNGHVAKIG 194
Query: 168 DFGLARWKTTDDP--VQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
DFGLAR D V+ + ++APE + + ++++DV+++GI+L ++ S
Sbjct: 195 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 20 QATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAK-VRKEASTQGFAEFQSEVYVLNFAR 77
Q G + + LG GGFG+V + +D G+ +A K R+E S + + E+ ++
Sbjct: 12 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 71
Query: 78 HKNIVML------LGFCCKENLNILVYEYICNKSLHWHL--FDNTESVLEWHQRYAAAIG 129
H N+V L +L +L EY L +L F+N + E R +
Sbjct: 72 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-D 130
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ LR+LHE IIHRD++P NI+L + + D G A+ + + T+ +
Sbjct: 131 ISSALRYLHE----NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK-ELDQGELCTEFV 185
Query: 187 GTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
GTL YLAPE E ++ D ++FG + + ++G
Sbjct: 186 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 38/284 (13%)
Query: 31 LGEGGFGHVYKGEL------KDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVML 84
LGEG FG V+ E +D ++A K K+AS +F E +L +H++IV
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 85 LGFCCKENLNILVYEYI----CNKSLHWHLFD-------NTESVLEWHQRYAAAIGTAKG 133
G C + + I+V+EY+ NK L H D N + L Q A A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGY 191
+ +L + +HRD+ N L+ + + +GDFG++R + T V + + +
Sbjct: 141 MVYLASQ----HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHE 251
+ PE + +DV++ G++L ++ + G++P L +IE +
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFT-------YGKQPWYQLSN--NEVIECITQGR 247
Query: 252 LIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
++ + YEL L C QR P R ++ + LL+
Sbjct: 248 VLQRPRTCPQEVYELMLG------CWQREPHMRKNIKGIHTLLQ 285
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 20 QATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAK-VRKEASTQGFAEFQSEVYVLNFAR 77
Q G + + LG GGFG+V + +D G+ +A K R+E S + + E+ ++
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 70
Query: 78 HKNIVML------LGFCCKENLNILVYEYICNKSLHWHL--FDNTESVLEWHQRYAAAIG 129
H N+V L +L +L EY L +L F+N + E R +
Sbjct: 71 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-D 129
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ LR+LHE IIHRD++P NI+L + + D G A+ + + T+ +
Sbjct: 130 ISSALRYLHE----NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK-ELDQGELCTEFV 184
Query: 187 GTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
GTL YLAPE E ++ D ++FG + + ++G
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 9/215 (4%)
Query: 18 IQQATGDFSKENLLGEGGFGHVYKGE-LKDGQMIAAKV--RKEASTQGFAE-FQSEVYVL 73
I + DF NLLG+G F VY+ E + G +A K+ +K G + Q+EV +
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
+H +I+ L + N LV E N ++ +L + + E R+ G
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH-QIITG 124
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLA 193
+ +LH I+HRD+ SN+LLT + + DFGLA + GT Y++
Sbjct: 125 MLYLHSH----GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYIS 180
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
PE A + +DV++ G + L+ GR D +
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD 215
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 31 LGEGGFGHVY----KGELKD---GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY KG +KD ++ V + AS + EF +E V+ ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHL------FDNTESVL--EWHQRYAAAIGTAKGLR 135
LLG + +++ E + L +L +N + + A A G+
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQT--KILGTLGYLA 193
+L+ +HRD+ N ++ DF +GDFG+ R D + K L + +++
Sbjct: 138 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE ++G+ + +DV++FG++L ++ + E+P Q L E ++ + L+
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN--EQVLRFVMEGGLL 244
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
D + +N D ++ + +C Q NP+ RPS E++ ++ E
Sbjct: 245 D-KPDNCPD-----MLLELMRMCWQYNPKMRPSFLEIISSIKEE 282
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 9/212 (4%)
Query: 25 FSKENLLGEGGFGHVYKGE--LKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
+ K + LGEG + VYKG+ L D + ++R E EV +L +H NIV
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
L E LV+EY+ +K L +L D+ +++ H +GL + H +
Sbjct: 64 TLHDIIHTEKSLTLVFEYL-DKDLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCHRQ-- 119
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI- 201
++HRD++P N+L+ L DFGLAR K+ + TL Y P+
Sbjct: 120 --KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 202 VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQ 233
S + D++ G I ++ +GR + + E Q
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ 209
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 30 LLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCC 89
L+G G +G VYKG L D + +A KV A+ Q F + +Y + H NI +
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFIN-EKNIYRVPLMEHDNIARFIVGDE 77
Query: 90 KENLN-----ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
+ + +LV EY N SL +L +T +W A +GL +LH E G
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLAYLHTELPRG 134
Query: 145 -----PIIHRDMRPSNILLTHDFVPMLGDFGLARWKT--------TDDPVQTKILGTLGY 191
I HRD+ N+L+ +D ++ DFGL+ T +D +GT+ Y
Sbjct: 135 DHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRY 194
Query: 192 LAPEYAENGIVSIR--------TDVYAFGIILLQL 218
+APE E G V++R D+YA G+I ++
Sbjct: 195 MAPEVLE-GAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 126/306 (41%), Gaps = 51/306 (16%)
Query: 14 SFSEIQQATGDFSKE---------NLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFA 64
+F + Q +F+KE ++G G FG V G LK V + G+
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 65 E-----FQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLE 119
E F E ++ H NI+ L G K ++V EY+ N SL +S L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLR 138
Query: 120 WHQRYAAAI-------GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA 172
H I G A G+++L + +HRD+ NIL+ + V + DFGLA
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMG----YVHRDLAARNILINSNLVCKVSDFGLA 194
Query: 173 RWKTTDDPVQTKILG---TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNG 229
R D G + + +PE + +DV+++GI+L ++MS G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YG 247
Query: 230 EEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGE 289
E P + + +I+ + + P ++ Y+L L C Q++ RP +
Sbjct: 248 ERPYWEMSN--QDVIKAVDEGYRLPPPMDCPAALYQLMLD------CWQKDRNNRPKFEQ 299
Query: 290 VVRLLE 295
+V +L+
Sbjct: 300 IVSILD 305
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 20 QATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAE--FQSEVYVLNFA 76
Q+ + L+GEG +G V K KD G+++A K E+ + E+ +L
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICNKSLH-WHLFDNTESVLEWH--QRYAAAIGTAKG 133
RH+N+V LL C K+ LV+E++ + L LF N L++ Q+Y I G
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIG 138
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLA 193
C IIHRD++P NIL++ V L DFG AR V + T Y A
Sbjct: 139 F------CHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRA 192
Query: 194 PEYAENGI-VSIRTDVYAFGIILLQLMSG 221
PE + DV+A G ++ ++ G
Sbjct: 193 PELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 131/285 (45%), Gaps = 38/285 (13%)
Query: 31 LGEGGFGHVY----KGELKD---GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY KG +KD ++ V + AS + EF +E V+ ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHL------FDNTESVL--EWHQRYAAAIGTAKGLR 135
LLG + +++ E + L +L +N + + A A G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQT--KILGTLGYLA 193
+L+ +HRD+ N ++ DF +GDFG+ R D + K L + +++
Sbjct: 147 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE ++G+ + +DV++FG++L ++ + E+P Q L E ++ + L+
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN--EQVLRFVMEGGLL 253
Query: 254 DPRIENSYDT-YELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
D + +N D +EL M C Q NP+ RPS E++ ++ E
Sbjct: 254 D-KPDNCPDMLFELMRM------CWQYNPKMRPSFLEIISSIKEE 291
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 147/325 (45%), Gaps = 59/325 (18%)
Query: 8 KDPMKFSFSEIQ---QATGDFSKENL-----LGEGGFGHVYKGEL--------KDGQMIA 51
+DPM SE + +F ++ L LGEG FG V E K+ +A
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 52 AKVRKEASTQ-GFAEFQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWH 109
K+ K+ +T+ ++ SE+ ++ +HKNI+ LLG C ++ ++ Y +L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREY 131
Query: 110 L-----------FDNT---ESVLEWHQRYAAAIGTAKGLRFL-HEECRGGPIIHRDMRPS 154
L +D E + + + A+G+ +L ++C IHRD+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDLAAR 186
Query: 155 NILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTDVYAFG 212
N+L+T + V + DFGLAR D + G L ++APE + + + ++DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 213 IILLQL--MSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMA 270
+++ ++ + G + EE + L++ H + P + T ELY+M
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELFKLLKEG----------HRMDKP----ANCTNELYMMM 292
Query: 271 KTAYLCVQRNPEGRPSMGEVVRLLE 295
+ + V P RP+ ++V L+
Sbjct: 293 RDCWHAV---PSQRPTFKQLVEDLD 314
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 103/224 (45%), Gaps = 14/224 (6%)
Query: 21 ATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQ-SEVYVLNFARH 78
++ F + LG G + VYKG K G +A K K S +G E+ ++ +H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 79 KNIVMLLGFCCKENLNILVYEYICN---KSLHWHLFDNTESVLEWHQRYAAAIGTAKGLR 135
+NIV L EN LV+E++ N K + NT LE + +GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQT--KILGTLGYLA 193
F HE I+HRD++P N+L+ LGDFGLAR PV T + TL Y A
Sbjct: 123 FCHE----NKILHRDLKPQNLLINKRGQLKLGDFGLAR--AFGIPVNTFSSEVVTLWYRA 176
Query: 194 PEYAENG-IVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSL 236
P+ S D+++ G IL ++++G+ + +E Q L
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKL 220
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 147/326 (45%), Gaps = 59/326 (18%)
Query: 7 MKDPMKFSFSEIQ---QATGDFSKENL-----LGEGGFGHVYKGEL--------KDGQMI 50
M PM SE + +F ++ L LGEG FG V E K+ +
Sbjct: 3 MDTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTV 62
Query: 51 AAKVRKEASTQ-GFAEFQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHW 108
A K+ K+ +T+ ++ SE+ ++ +HKNI+ LLG C ++ ++ EY +L
Sbjct: 63 AVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 122
Query: 109 HL-----------FDNT---ESVLEWHQRYAAAIGTAKGLRFL-HEECRGGPIIHRDMRP 153
+L +D E + + + A+G+ +L ++C IHRD+
Sbjct: 123 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDLAA 177
Query: 154 SNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTDVYAF 211
N+L+T + V + DFGLAR D + G L ++APE + + + ++DV++F
Sbjct: 178 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 237
Query: 212 GIILLQL--MSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLM 269
G+++ ++ + G + EE + L++ H + P + T ELY+M
Sbjct: 238 GVLMWEIFTLGGSPYPGIPVEELFKLLKEG----------HRMDKP----ANCTNELYMM 283
Query: 270 AKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ + V P RP+ ++V L+
Sbjct: 284 MRDCWHAV---PSQRPTFKQLVEDLD 306
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 141/314 (44%), Gaps = 60/314 (19%)
Query: 7 MKDPMKFSFSEIQQATGDFSKENLLGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQ 61
M+DP +F ++ F ++ LG+G FG V L+D G+++A K + ++ +
Sbjct: 1 MRDPTQFEERHLK-----FLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE 53
Query: 62 GFAEFQSEVYVLNFARHKNIVMLLGFCC---KENLNILVYEYICNKSLHWHLFDNTESVL 118
+F+ E+ +L +H NIV G C + NL L+ EY+ SL +L
Sbjct: 54 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYL-------- 104
Query: 119 EWHQRYAAAIGTAKGLRFLHEECRG------GPIIHRDMRPSNILLTHDFVPMLGDFGLA 172
Q++ I K L++ + C+G IHRD+ NIL+ ++ +GDFGL
Sbjct: 105 ---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Query: 173 RWKTTD-------DPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVV 225
+ D +P ++ I + APE S+ +DV++FG++L +L + +
Sbjct: 162 KVLPQDKEXXKVKEPGESPIF----WYAPESLTESKFSVASDVWSFGVVLYELFT---YI 214
Query: 226 DMNGEEPQQSLRQWAEPLIEKLALHELID--------PRIENSYDTYELYLMAKTAYLCV 277
+ + P + +R ++ + LI+ PR + D E+Y++ C
Sbjct: 215 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CW 269
Query: 278 QRNPEGRPSMGEVV 291
N RPS ++
Sbjct: 270 NNNVNQRPSFRDLA 283
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 20/213 (9%)
Query: 19 QQATGDFSKEN---LLGE-GGFGHVYKGELKDGQMIAA-KVRKEASTQGFAEFQSEVYVL 73
+ T D + E+ ++GE G FG VYK + K+ ++AA KV S + ++ E+ +L
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 61
Query: 74 NFARHKNIVMLL-GFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
H NIV LL F + NL IL+ E+ ++ + + E L Q T
Sbjct: 62 ASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLD 119
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTK--ILGTLG 190
L +LH+ IIHRD++ NIL T D L DFG++ K T +Q + +GT
Sbjct: 120 ALNYLHD----NKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRTXIQRRDSFIGTPY 174
Query: 191 YLAPEY-----AENGIVSIRTDVYAFGIILLQL 218
++APE +++ + DV++ GI L+++
Sbjct: 175 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 51/306 (16%)
Query: 14 SFSEIQQATGDFSKE---------NLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFA 64
+F + Q +F+KE ++G G FG V G LK V + G+
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 65 E-----FQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLE 119
E F E ++ H NI+ L G K ++V EY+ N SL +S L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLR 138
Query: 120 WHQRYAAAI-------GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA 172
H I G A G+++L + +HRD+ NIL+ + V + DFGL+
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMG----FVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 173 RWKTTDDPVQTKILG---TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNG 229
R D G + + +PE + +DV+++GI+L ++MS G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YG 247
Query: 230 EEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGE 289
E P + + +I+ + + P ++ Y+L L C Q++ RP +
Sbjct: 248 ERPYWEMSN--QDVIKAVDEGYRLPPPMDCPAALYQLMLD------CWQKDRNNRPKFEQ 299
Query: 290 VVRLLE 295
+V +L+
Sbjct: 300 IVSILD 305
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 39/242 (16%)
Query: 9 DPMKFSFSEIQQATGDFSKENL-----LGEGGFGHVYK----GELKDGQMIAAKVRKEAS 59
DP + ++E +F + NL LG G FG V + G K+ ++ V+ S
Sbjct: 31 DPTQLPYNE----KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS 86
Query: 60 TQGFAE---FQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSL--------- 106
T E SE+ +++ +H+NIV LLG C +++ EY C L
Sbjct: 87 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRP 146
Query: 107 -----HWHLFDNTESVLEWHQRYAAAIGTAKGLRFL-HEECRGGPIIHRDMRPSNILLTH 160
++ N E L + A+G+ FL + C IHRD+ N+LLT+
Sbjct: 147 PGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNC-----IHRDVAARNVLLTN 201
Query: 161 DFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQL 218
V +GDFGLAR D V+ + ++APE + + ++++DV+++GI+L ++
Sbjct: 202 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
Query: 219 MS 220
S
Sbjct: 262 FS 263
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 129/299 (43%), Gaps = 47/299 (15%)
Query: 19 QQATGDFSKE---------NLLGEGGFGHVYKGELK-DGQ---MIAAKVRKEAST-QGFA 64
QA +F+KE ++G G FG V G LK G+ +A K K T +
Sbjct: 1 NQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR 60
Query: 65 EFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRY 124
+F SE ++ H NI+ L G K +++ EY+ N SL L N + Q
Sbjct: 61 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRFTVIQLV 119
Query: 125 AAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTK 184
G G+++L + +HRD+ NIL+ + V + DFG++R D
Sbjct: 120 GMLRGIGSGMKYLSDMS----YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 175
Query: 185 ILG---TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMS--GRKVVDMNGEEPQQSLRQ- 238
G + + APE + +DV+++GI++ ++MS R DM+ ++ +++ +
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 235
Query: 239 --WAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
P+ +ALH+L+ C Q+ RP G++V +L+
Sbjct: 236 YRLPPPMDCPIALHQLM--------------------LDCWQKERSDRPKFGQIVNMLD 274
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 31 LGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGF-AEFQSEVYVLNFARHKNIVMLLGFC 88
+G G FG V+ G L+ D ++A K +E A+F E +L H NIV L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIG-TAKGLRFLHEECRGGPII 147
++ +V E + + + F TE + +G A G+ +L +C I
Sbjct: 182 TQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC----CI 235
Query: 148 HRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG----TLGYLAPEYAENGIVS 203
HRD+ N L+T V + DFG++R + D V G + + APE G S
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEA--DGVXAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 204 IRTDVYAFGIILLQLMS 220
+DV++FGI+L + S
Sbjct: 294 SESDVWSFGILLWETFS 310
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 119/290 (41%), Gaps = 38/290 (13%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKD-GQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHK 79
D +LG+G FG K ++ G+++ K +R + TQ F EV V+ H
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ--RTFLKEVKVMRCLEHP 67
Query: 80 NIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHE 139
N++ +G K+ + EYI +L + + +S W QR + A A G+ +LH
Sbjct: 68 NVLKFIGVLYKDKRLNFITEYIKGGTLR-GIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 140 ECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW--------------KTTDDPVQTKI 185
IIHRD+ N L+ + ++ DFGLAR K D + +
Sbjct: 127 M----NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 186 LGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIE 245
+G ++APE + DV++FGI+L +++ GR D P R L
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD-----PDYLPRTMDFGLNV 236
Query: 246 KLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ L P S+ C +PE RPS ++ LE
Sbjct: 237 RGFLDRYCPPNCPPSF--------FPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 17 EIQQATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQS---EVYV 72
+I+ DF +LG+G FG V+ E K Q A K K+ + + E V
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 73 LNFARHKNIV--MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGT 130
L+ A + M F KENL V EY+ L +H+ + L YAA I
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENL-FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI-- 128
Query: 131 AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLG 190
GL+FLH + I++RD++ NILL D + DFG+ + D + GT
Sbjct: 129 ILGLQFLHSKG----IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPD 184
Query: 191 YLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEE 231
Y+APE + D ++FG++L +++ G+ EE
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE 225
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 147/325 (45%), Gaps = 59/325 (18%)
Query: 8 KDPMKFSFSEIQ---QATGDFSKENL-----LGEGGFGHVYKGEL--------KDGQMIA 51
+DPM SE + +F ++ L LGEG FG V E K+ +A
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 52 AKVRKEASTQ-GFAEFQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWH 109
K+ K+ +T+ ++ SE+ ++ +HKNI+ LLG C ++ ++ Y +L +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREY 131
Query: 110 L-----------FDNT---ESVLEWHQRYAAAIGTAKGLRFL-HEECRGGPIIHRDMRPS 154
L +D E + + + A+G+ +L ++C IHRD+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDLAAR 186
Query: 155 NILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTDVYAFG 212
N+L+T + V + DFGLAR D + G L ++APE + + + ++DV++FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 213 IILLQL--MSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMA 270
+++ ++ + G + EE + L++ H + P + T ELY+M
Sbjct: 247 VLMWEIFTLGGSPYPGIPVEELFKLLKEG----------HRMDKP----ANCTNELYMMM 292
Query: 271 KTAYLCVQRNPEGRPSMGEVVRLLE 295
+ + V P RP+ ++V L+
Sbjct: 293 RDCWHAV---PSQRPTFKQLVEDLD 314
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 86 GFCC---KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ EY+ SL +L Q +A I K L++ + C+
Sbjct: 81 GVCYSAGRRNLK-LIMEYLPYGSLRDYL-----------QAHAERIDHIKLLQYTSQICK 128
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHRD+ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--- 185
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 186 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 242 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 286
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 51/294 (17%)
Query: 31 LGEGGFGHVYKGEL--------KDGQMIAAKVRKEASTQ-GFAEFQSEVYVLN-FARHKN 80
LGEG FG V E K+ +A K+ K+ +T+ ++ SE+ ++ +HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHL-----------FDNT---ESVLEWHQRYAA 126
I+ LLG C ++ ++ EY +L +L +D E + + +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 127 AIGTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI 185
A+G+ +L ++C IHRD+ N+L+T + V + DFGLAR D +
Sbjct: 150 TYQLARGMEYLASQKC-----IHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 186 LGTL--GYLAPEYAENGIVSIRTDVYAFGIILLQL--MSGRKVVDMNGEEPQQSLRQWAE 241
G L ++APE + + + ++DV++FG+++ ++ + G + EE + L++
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG-- 262
Query: 242 PLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
H + P + T ELY+M + + V P RP+ ++V L+
Sbjct: 263 --------HRMDKP----ANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLD 301
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 123/281 (43%), Gaps = 38/281 (13%)
Query: 28 ENLLGEGGFGHVYKGELK-DGQ---MIAAKVRKEAST-QGFAEFQSEVYVLNFARHKNIV 82
E ++G G FG V G LK G+ +A K K T + +F SE ++ H NI+
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
L G K +++ EY+ N SL L N + Q G G+++L +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRFTVIQLVGMLRGIGSGMKYLSDMS- 130
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG---TLGYLAPEYAEN 199
+HRD+ NIL+ + V + DFG++R D G + + APE
Sbjct: 131 ---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 200 GIVSIRTDVYAFGIILLQLMS--GRKVVDMNGEEPQQSLRQ---WAEPLIEKLALHELID 254
+ +DV+++GI++ ++MS R DM+ ++ +++ + P+ +ALH+L+
Sbjct: 188 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLM- 246
Query: 255 PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
C Q+ RP G++V +L+
Sbjct: 247 -------------------LDCWQKERSDRPKFGQIVNMLD 268
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 51/306 (16%)
Query: 14 SFSEIQQATGDFSKE---------NLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFA 64
+F + Q +F+KE ++G G FG V G LK V + G+
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 65 E-----FQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLE 119
E F E ++ H NI+ L G K ++V EY+ N SL +S L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLR 138
Query: 120 WHQRYAAAI-------GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA 172
H I G A G+++L + +HRD+ NIL+ + V + DFGL+
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMG----YVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 173 RWKTTDDPVQTKILG---TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNG 229
R D G + + +PE + +DV+++GI+L ++MS G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YG 247
Query: 230 EEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGE 289
E P + + +I+ + + P ++ Y+L L C Q++ RP +
Sbjct: 248 ERPYWEMSN--QDVIKAVDEGYRLPPPMDCPAALYQLMLD------CWQKDRNNRPKFEQ 299
Query: 290 VVRLLE 295
+V +L+
Sbjct: 300 IVSILD 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 51/306 (16%)
Query: 14 SFSEIQQATGDFSKE---------NLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFA 64
+F + Q +F+KE ++G G FG V G LK V + G+
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 65 E-----FQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLE 119
E F E ++ H NI+ L G K ++V EY+ N SL +S L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLR 138
Query: 120 WHQRYAAAI-------GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA 172
H I G A G+++L + +HRD+ NIL+ + V + DFGL+
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMG----YVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 173 RWKTTDDPVQTKILG---TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNG 229
R D G + + +PE + +DV+++GI+L ++MS G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YG 247
Query: 230 EEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGE 289
E P + + +I+ + + P ++ Y+L L C Q++ RP +
Sbjct: 248 ERPYWEMSN--QDVIKAVDEGYRLPPPMDCPAALYQLMLD------CWQKDRNNRPKFEQ 299
Query: 290 VVRLLE 295
+V +L+
Sbjct: 300 IVSILD 305
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 42/284 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G+G FG V++G+ + G+ +A K+ + + ++E+Y RH+NI LGF
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENI---LGFIAA 66
Query: 91 ENLNILVYEYICNKSLHWHLFDNTE--SVLEWHQRYAA--------AIGTAKGLRFLHEE 140
+N + + + W + D E S+ ++ RY A+ TA GL LH E
Sbjct: 67 DNKDNGTWTQL------WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 141 ---CRGGPII-HRDMRPSNILLTHDFVPMLGDFGLA-RWKTTDDPVQTKI---LGTLGYL 192
+G P I HRD++ NIL+ + + D GLA R + D + +GT Y+
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 193 APEYAENGI------VSIRTDVYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLI 244
APE ++ I R D+YA G++ ++ + + + + P L ++P +
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP-SDPSV 239
Query: 245 E---KLALHELIDPRIENSYDTYE-LYLMAKTAYLCVQRNPEGR 284
E K+ + + P I N + + E L +MAK C N R
Sbjct: 240 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 283
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 42/284 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G+G FG V++G+ + G+ +A K+ + + ++E+Y RH+NI LGF
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENI---LGFIAA 71
Query: 91 ENLNILVYEYICNKSLHWHLFDNTE--SVLEWHQRYAA--------AIGTAKGLRFLHEE 140
+N + + + W + D E S+ ++ RY A+ TA GL LH E
Sbjct: 72 DNKDNGTWTQL------WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 141 ---CRGGPII-HRDMRPSNILLTHDFVPMLGDFGLA-RWKTTDDPVQTKI---LGTLGYL 192
+G P I HRD++ NIL+ + + D GLA R + D + +GT Y+
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 193 APEYAENGI------VSIRTDVYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLI 244
APE ++ I R D+YA G++ ++ + + + + P L ++P +
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP-SDPSV 244
Query: 245 E---KLALHELIDPRIENSYDTYE-LYLMAKTAYLCVQRNPEGR 284
E K+ + + P I N + + E L +MAK C N R
Sbjct: 245 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 288
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 42/284 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G+G FG V++G+ + G+ +A K+ + + ++E+Y RH+NI LGF
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENI---LGFIAA 65
Query: 91 ENLNILVYEYICNKSLHWHLFDNTE--SVLEWHQRYAA--------AIGTAKGLRFLHEE 140
+N + + + W + D E S+ ++ RY A+ TA GL LH E
Sbjct: 66 DNKDNGTWTQL------WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 119
Query: 141 ---CRGGPII-HRDMRPSNILLTHDFVPMLGDFGLA-RWKTTDDPVQTKI---LGTLGYL 192
+G P I HRD++ NIL+ + + D GLA R + D + +GT Y+
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179
Query: 193 APEYAENGI------VSIRTDVYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLI 244
APE ++ I R D+YA G++ ++ + + + + P L ++P +
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP-SDPSV 238
Query: 245 E---KLALHELIDPRIENSYDTYE-LYLMAKTAYLCVQRNPEGR 284
E K+ + + P I N + + E L +MAK C N R
Sbjct: 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 282
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 31 LGEGGFGHVY----KGELKD---GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY KG +KD ++ V + AS + EF +E V+ ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHL------FDNTESVL--EWHQRYAAAIGTAKGLR 135
LLG + +++ E + L +L +N + + A A G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
+L+ +HRD+ N ++ DF +GDFG+ R ++T K L + +++
Sbjct: 147 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE ++G+ + +DV++FG++L ++ + E+P Q L E ++ + L+
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN--EQVLRFVMEGGLL 253
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
D + +N D ++ + +C Q NP+ RPS E++ ++ E
Sbjct: 254 D-KPDNCPD-----MLFELMRMCWQYNPKMRPSFLEIISSIKEE 291
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 42/284 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G+G FG V++G+ + G+ +A K+ + + ++E+Y RH+NI LGF
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENI---LGFIAA 68
Query: 91 ENLNILVYEYICNKSLHWHLFDNTE--SVLEWHQRYAA--------AIGTAKGLRFLHEE 140
+N + + + W + D E S+ ++ RY A+ TA GL LH E
Sbjct: 69 DNKDNGTWTQL------WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 141 ---CRGGPII-HRDMRPSNILLTHDFVPMLGDFGLA-RWKTTDDPVQTKI---LGTLGYL 192
+G P I HRD++ NIL+ + + D GLA R + D + +GT Y+
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 193 APEYAENGI------VSIRTDVYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLI 244
APE ++ I R D+YA G++ ++ + + + + P L ++P +
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP-SDPSV 241
Query: 245 E---KLALHELIDPRIENSYDTYE-LYLMAKTAYLCVQRNPEGR 284
E K+ + + P I N + + E L +MAK C N R
Sbjct: 242 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 285
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 121/268 (45%), Gaps = 25/268 (9%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V+ G + +A K K T F E ++ +H +V L K
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
E ++ E++ SL L + + + + A+G+ ++ + IHRD
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN----YIHRD 134
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+R +N+L++ + + DFGLAR +D T G + + APE G +I+++
Sbjct: 135 LRAANVLVSESLMCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSN 192
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELY 267
V++FGI+L ++++ K+ P ++ L + + PR+EN D ELY
Sbjct: 193 VWSFGILLYEIVTYGKI-----PYPGRTNADVMSALSQGYRM-----PRMENCPD--ELY 240
Query: 268 LMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ K +C + E RP+ + +L+
Sbjct: 241 DIMK---MCWKEKAEERPTFDYLQSVLD 265
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 86 GFCC---KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ EY+ SL +L Q++ I K L++ + C+
Sbjct: 83 GVCYSAGRRNLK-LIMEYLPYGSLRDYL-----------QKHKERIDHIKLLQYTSQICK 130
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHRD+ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 131 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--- 187
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 188 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 243
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 244 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 288
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 51/294 (17%)
Query: 31 LGEGGFGHVYKGEL--------KDGQMIAAKVRKEASTQ-GFAEFQSEVYVLN-FARHKN 80
LGEG FG V E K+ +A K+ K+ +T+ ++ SE+ ++ +HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHL-----------FDNT---ESVLEWHQRYAA 126
I+ LLG C ++ ++ EY +L +L +D E + + +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 127 AIGTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI 185
A+G+ +L ++C IHRD+ N+L+T + V + DFGLAR D +
Sbjct: 209 TYQLARGMEYLASQKC-----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 186 LGTL--GYLAPEYAENGIVSIRTDVYAFGIILLQL--MSGRKVVDMNGEEPQQSLRQWAE 241
G L ++APE + + + ++DV++FG+++ ++ + G + EE + L++
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG-- 321
Query: 242 PLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
H + P + T ELY+M + + V P RP+ ++V L+
Sbjct: 322 --------HRMDKP----ANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLD 360
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 31 LGEGGFGHVY----KGELKD---GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY KG +KD ++ V + AS + EF +E V+ ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHL------FDNTESVL--EWHQRYAAAIGTAKGLR 135
LLG + +++ E + L +L +N + + A A G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
+L+ +HRD+ N ++ DF +GDFG+ R ++T K L + +++
Sbjct: 146 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE ++G+ + +DV++FG++L ++ + E+P Q L E ++ + L+
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN--EQVLRFVMEGGLL 252
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
D + +N D ++ + +C Q NP+ RPS E++ ++ E
Sbjct: 253 D-KPDNCPD-----MLFELMRMCWQYNPKMRPSFLEIISSIKEE 290
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 31 LGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGF-AEFQSEVYVLNFARHKNIVMLLGFC 88
+G G FG V+ G L+ D ++A K +E A+F E +L H NIV L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIG-TAKGLRFLHEECRGGPII 147
++ +V E + + + F TE + +G A G+ +L +C I
Sbjct: 182 TQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC----CI 235
Query: 148 HRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG----TLGYLAPEYAENGIVS 203
HRD+ N L+T V + DFG++R + D V G + + APE G S
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEA--DGVYAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 204 IRTDVYAFGIILLQLMS 220
+DV++FGI+L + S
Sbjct: 294 SESDVWSFGILLWETFS 310
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 42/284 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G+G FG V++G+ + G+ +A K+ + + ++E+Y RH+NI LGF
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENI---LGFIAA 104
Query: 91 ENLNILVYEYICNKSLHWHLFDNTE--SVLEWHQRYAA--------AIGTAKGLRFLHEE 140
+N + + + W + D E S+ ++ RY A+ TA GL LH E
Sbjct: 105 DNKDNGTWTQL------WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 158
Query: 141 ---CRGGPII-HRDMRPSNILLTHDFVPMLGDFGLA-RWKTTDDPVQTKI---LGTLGYL 192
+G P I HRD++ NIL+ + + D GLA R + D + +GT Y+
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 193 APEYAENGI------VSIRTDVYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLI 244
APE ++ I R D+YA G++ ++ + + + + P L ++P +
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP-SDPSV 277
Query: 245 E---KLALHELIDPRIENSYDTYE-LYLMAKTAYLCVQRNPEGR 284
E K+ + + P I N + + E L +MAK C N R
Sbjct: 278 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 321
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 86 GFCC---KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ EY+ SL +L Q++ I K L++ + C+
Sbjct: 84 GVCYSAGRRNLK-LIMEYLPYGSLRDYL-----------QKHKERIDHIKLLQYTSQICK 131
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHRD+ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 132 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--- 188
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 189 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 244
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 245 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 289
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 31 LGEGGFGHVY----KGELKD---GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY KG +KD ++ V + AS + EF +E V+ ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHL------FDNTESVL--EWHQRYAAAIGTAKGLR 135
LLG + +++ E + L +L +N + + A A G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
+L+ +HRD+ N ++ DF +GDFG+ R ++T K L + +++
Sbjct: 146 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE ++G+ + +DV++FG++L ++ + E+P Q L E ++ + L+
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN--EQVLRFVMEGGLL 252
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
D + +N D ++ + +C Q NP+ RPS E++ ++ E
Sbjct: 253 D-KPDNCPD-----MLFELMRMCWQYNPKMRPSFLEIISSIKEE 290
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 86 GFCC---KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ EY+ SL +L Q++ I K L++ + C+
Sbjct: 109 GVCYSAGRRNLK-LIMEYLPYGSLRDYL-----------QKHKERIDHIKLLQYTSQICK 156
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHRD+ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 157 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--- 213
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 214 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 269
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 270 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 314
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 31 LGEGGFGHVY----KGELKD---GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY KG +KD ++ V + AS + EF +E V+ ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHL------FDNTESVL--EWHQRYAAAIGTAKGLR 135
LLG + +++ E + L +L +N + + A A G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
+L+ +HRD+ N ++ DF +GDFG+ R ++T K L + +++
Sbjct: 153 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE ++G+ + +DV++FG++L ++ + E+P Q L E ++ + L+
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN--EQVLRFVMEGGLL 259
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
D + +N D ++ + +C Q NP+ RPS E++ ++ E
Sbjct: 260 D-KPDNCPD-----MLFELMRMCWQYNPKMRPSFLEIISSIKEE 297
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 86 GFC---CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ EY+ SL +L Q++ I K L++ + C+
Sbjct: 81 GVCYSAGRRNLK-LIMEYLPYGSLRDYL-----------QKHKERIDHIKLLQYTSQICK 128
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHRD+ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--- 185
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 186 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 242 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 286
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 31 LGEGGFGHVY----KGELKD---GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY KG +KD ++ V + AS + EF +E V+ ++V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHL------FDNTESVL--EWHQRYAAAIGTAKGLR 135
LLG + +++ E + L +L +N + + A A G+
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
+L+ +HRD+ N ++ DF +GDFG+ R ++T K L + +++
Sbjct: 175 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 230
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE ++G+ + +DV++FG++L ++ + E+P Q L E ++ + L+
Sbjct: 231 PESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN--EQVLRFVMEGGLL 281
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
D + +N D ++ + +C Q NP+ RPS E++ ++ E
Sbjct: 282 D-KPDNCPD-----MLFELMRMCWQYNPKMRPSFLEIISSIKEE 319
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 31 LGEGGFGHVY----KGELKD---GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY KG +KD ++ V + AS + EF +E V+ ++V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHL------FDNTESVL--EWHQRYAAAIGTAKGLR 135
LLG + +++ E + L +L +N + + A A G+
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
+L+ +HRD+ N ++ DF +GDFG+ R ++T K L + +++
Sbjct: 144 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 199
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE ++G+ + +DV++FG++L ++ + E+P Q L E ++ + L+
Sbjct: 200 PESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN--EQVLRFVMEGGLL 250
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
D + +N D ++ + +C Q NP+ RPS E++ ++ E
Sbjct: 251 D-KPDNCPD-----MLFELMRMCWQYNPKMRPSFLEIISSIKEE 288
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 31 LGEGGFGHVY----KGELKD---GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY KG +KD ++ V + AS + EF +E V+ ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHL------FDNTESVL--EWHQRYAAAIGTAKGLR 135
LLG + +++ E + L +L +N + + A A G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
+L+ +HRD+ N ++ DF +GDFG+ R ++T K L + +++
Sbjct: 140 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE ++G+ + +DV++FG++L ++ + E+P Q L E ++ + L+
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN--EQVLRFVMEGGLL 246
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
D + +N D ++ + +C Q NP+ RPS E++ ++ E
Sbjct: 247 D-KPDNCPD-----MLFELMRMCWQYNPKMRPSFLEIISSIKEE 284
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 132/285 (46%), Gaps = 38/285 (13%)
Query: 31 LGEGGFGHVY----KGELKD---GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY KG +KD ++ V + AS + EF +E V+ ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 84 LLGFCCKENLNILVYEYICN-------KSLHWHLFDNTESVLEWHQRYAAAIG-TAKGLR 135
LLG + +++ E + +SL + +N + G A G+
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
+L+ +HRD+ N ++ DF +GDFG+ R ++T K L + +++
Sbjct: 143 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 198
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE ++G+ + +DV++FG++L ++ + E+P Q L E ++ + L+
Sbjct: 199 PESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN--EQVLRFVMEGGLL 249
Query: 254 DPRIENSYDT-YELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
D + +N D +EL M C Q NP+ RPS E++ ++ E
Sbjct: 250 D-KPDNCPDMLFELMRM------CWQYNPKMRPSFLEIISSIKEE 287
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 86 GFC---CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ EY+ SL +L Q++ I K L++ + C+
Sbjct: 85 GVCYSAGRRNLK-LIMEYLPYGSLRDYL-----------QKHKERIDHIKLLQYTSQICK 132
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHRD+ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 133 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--- 189
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 190 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 245
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 246 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 290
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 86 GFCC---KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ EY+ SL +L Q++ I K L++ + C+
Sbjct: 76 GVCYSAGRRNLK-LIMEYLPYGSLRDYL-----------QKHKERIDHIKLLQYTSQICK 123
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHRD+ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--- 180
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 181 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 236
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 237 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 281
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 42/284 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G+G FG V++G+ + G+ +A K+ + + ++E+Y RH+NI LGF
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENI---LGFIAA 91
Query: 91 ENLNILVYEYICNKSLHWHLFDNTE--SVLEWHQRYAA--------AIGTAKGLRFLHEE 140
+N + + + W + D E S+ ++ RY A+ TA GL LH E
Sbjct: 92 DNKDNGTWTQL------WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 145
Query: 141 ---CRGGPII-HRDMRPSNILLTHDFVPMLGDFGLA-RWKTTDDPVQTKI---LGTLGYL 192
+G P I HRD++ NIL+ + + D GLA R + D + +GT Y+
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 205
Query: 193 APEYAENGI------VSIRTDVYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLI 244
APE ++ I R D+YA G++ ++ + + + + P L ++P +
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP-SDPSV 264
Query: 245 E---KLALHELIDPRIENSYDTYE-LYLMAKTAYLCVQRNPEGR 284
E K+ + + P I N + + E L +MAK C N R
Sbjct: 265 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 308
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 86 GFCC---KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ EY+ SL +L Q++ I K L++ + C+
Sbjct: 77 GVCYSAGRRNLK-LIMEYLPYGSLRDYL-----------QKHKERIDHIKLLQYTSQICK 124
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHRD+ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--- 181
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 182 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 237
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 238 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 282
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 86 GFCC---KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ EY+ SL +L Q++ I K L++ + C+
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYL-----------QKHKERIDHIKLLQYTSQICK 125
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHRD+ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF--- 182
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 183 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 239 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 283
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 31 LGEGGFGHVY----KGELKD---GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY KG +KD ++ V + AS + EF +E V+ ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 84 LLGFCCKENLNILVYEYICN-------KSLHWHLFDNTESVLEWHQRYAAAIG-TAKGLR 135
LLG + +++ E + +SL + +N + G A G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
+L+ +HRD+ N ++ DF +GDFG+ R ++T K L + +++
Sbjct: 153 YLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE ++G+ + +DV++FG++L ++ + E+P Q L E ++ + L+
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN--EQVLRFVMEGGLL 259
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
D + +N D ++ + +C Q NP+ RPS E++ ++ E
Sbjct: 260 D-KPDNCPD-----MLFELMRMCWQYNPKMRPSFLEIISSIKEE 297
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 86 GFC---CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ EY+ SL +L Q++ I K L++ + C+
Sbjct: 96 GVCYSAGRRNLK-LIMEYLPYGSLRDYL-----------QKHKERIDHIKLLQYTSQICK 143
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHRD+ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--- 200
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 201 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 256
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 257 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 301
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 51/294 (17%)
Query: 31 LGEGGFGHVYKGEL--------KDGQMIAAKVRKEASTQ-GFAEFQSEVYVLN-FARHKN 80
LGEG FG V E K+ +A K+ K+ +T+ ++ SE+ ++ +HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHL-----------FDNT---ESVLEWHQRYAA 126
I+ LLG C ++ ++ EY +L +L +D E + + +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 127 AIGTAKGLRFL-HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI 185
A+G+ +L ++C IHRD+ N+L+T + V + DFGLAR D +
Sbjct: 152 TYQLARGMEYLASQKC-----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 186 LGTL--GYLAPEYAENGIVSIRTDVYAFGIILLQL--MSGRKVVDMNGEEPQQSLRQWAE 241
G L ++APE + + + ++DV++FG+++ ++ + G + EE + L++
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG-- 264
Query: 242 PLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
H + P + T ELY+M + + V P RP+ ++V L+
Sbjct: 265 --------HRMDKP----ANCTNELYMMMRDCWHAV---PSQRPTFKQLVEDLD 303
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 125/306 (40%), Gaps = 51/306 (16%)
Query: 14 SFSEIQQATGDFSKE---------NLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFA 64
+F + Q +F+KE ++G G FG V G LK V + G+
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 65 E-----FQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLE 119
E F E ++ H NI+ L G K ++V EY+ N SL +S L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLR 138
Query: 120 WHQRYAAAI-------GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA 172
H I G A G+++L + +HRD+ NIL+ + V + DFGL
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMG----YVHRDLAARNILINSNLVCKVSDFGLG 194
Query: 173 RWKTTDDPVQTKILG---TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNG 229
R D G + + +PE + +DV+++GI+L ++MS G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YG 247
Query: 230 EEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGE 289
E P + + +I+ + + P ++ Y+L L C Q++ RP +
Sbjct: 248 ERPYWEMSN--QDVIKAVDEGYRLPPPMDCPAALYQLMLD------CWQKDRNNRPKFEQ 299
Query: 290 VVRLLE 295
+V +L+
Sbjct: 300 IVSILD 305
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 126/291 (43%), Gaps = 53/291 (18%)
Query: 26 SKENLLGEGGFGHVYKGELKDGQ-----MIAAKVRKEASTQG-FAEFQSEVYVLNFARHK 79
+++ ++G G FG VYKG LK +A K K T+ +F E ++ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 80 NIVMLLGFCCKENLNILVYEYICNKSLHWHLF--DNTESVLEWHQRYAAAIGTAKGLRFL 137
NI+ L G K +++ EY+ N +L L D SVL Q G A G+++L
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL---QLVGMLRGIAAGMKYL 163
Query: 138 HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG----TLGYLA 193
+HRD+ NIL+ + V + DFGL+R DDP T + + A
Sbjct: 164 ANMN----YVHRDLAARNILVNSNLVCKVSDFGLSR-VLEDDPEATYTTSGGKIPIRWTA 218
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE + +DV++FGI++ ++M+ GE P W +L+ HE++
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMT-------YGERP-----YW------ELSNHEVM 260
Query: 254 DP-----RIENSYDT----YELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
R+ D Y+L + C Q+ RP ++V +L+
Sbjct: 261 KAINDGFRLPTPMDCPSAIYQLMMQ------CWQQERARRPKFADIVSILD 305
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 86 GFC---CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ EY+ SL +L Q++ I K L++ + C+
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYL-----------QKHKERIDHIKLLQYTSQICK 125
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHRD+ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--- 182
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 183 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 239 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 283
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 86 GFC---CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ EY+ SL +L Q++ I K L++ + C+
Sbjct: 96 GVCYSAGRRNLK-LIMEYLPYGSLRDYL-----------QKHKERIDHIKLLQYTSQICK 143
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHRD+ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--- 200
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 201 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 256
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 257 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 301
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQMIAAK-VRKEASTQGFAEFQ-SEVYVLNFARHKNIV 82
+ K +GEG +G VYK + G+++A K +R +A +G E+ +L H NIV
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
L+ E LV+E++ K L + D ++ L+ Q +G+ H+
Sbjct: 83 SLIDVIHSERCLTLVFEFM-EKDLK-KVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-- 138
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEY-AENGI 201
I+HRD++P N+L+ D L DFGLAR T + TL Y AP+ +
Sbjct: 139 --RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 202 VSIRTDVYAFGIILLQLMSGRKV 224
S D+++ G I ++++G+ +
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPL 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 86 GFCC---KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ EY+ SL +L Q++ I K L++ + C+
Sbjct: 82 GVCYSAGRRNLK-LIMEYLPYGSLRDYL-----------QKHKERIDHIKLLQYTSQICK 129
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHRD+ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 130 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--- 186
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 187 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 242
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 243 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 287
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 42/287 (14%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE-----FQSEVYVLNFARH 78
+ S + ++G G FG V G LK V + G+ E F E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI-------GTA 131
NI+ L G K ++V EY+ N SL +S L H I G A
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG---T 188
G+++L + +HRD+ NIL+ + V + DFGL+R D G
Sbjct: 158 SGMKYLSDMG----YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 189 LGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLA 248
+ + +PE + +DV+++GI+L ++MS GE P + + +I+ +
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSN--QDVIKAVD 264
Query: 249 LHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ P ++ Y+L L C Q++ RP ++V +L+
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD------CWQKDRNNRPKFEQIVSILD 305
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQMIAAK-VRKEASTQGFAEFQ-SEVYVLNFARHKNIV 82
+ K +GEG +G VYK + G+++A K +R +A +G E+ +L H NIV
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
L+ E LV+E++ K L + D ++ L+ Q +G+ H+
Sbjct: 83 SLIDVIHSERCLTLVFEFM-EKDLK-KVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-- 138
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEY-AENGI 201
I+HRD++P N+L+ D L DFGLAR T + TL Y AP+ +
Sbjct: 139 --RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 202 VSIRTDVYAFGIILLQLMSGRKV 224
S D+++ G I ++++G+ +
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPL 219
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 42/287 (14%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE-----FQSEVYVLNFARH 78
+ S + ++G G FG V G LK V + G+ E F E ++ H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI-------GTA 131
NI+ L G K ++V EY+ N SL +S L H I G A
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLRKHDAQFTVIQLVGMLRGIA 155
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG---T 188
G+++L + +HRD+ NIL+ + V + DFGL+R D G
Sbjct: 156 SGMKYLSDMG----YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Query: 189 LGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLA 248
+ + +PE + +DV+++GI+L ++MS GE P + + +I+ +
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSN--QDVIKAVD 262
Query: 249 LHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ P ++ Y+L L C Q++ RP ++V +L+
Sbjct: 263 EGYRLPPPMDCPAALYQLMLD------CWQKDRNNRPKFEQIVSILD 303
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 42/287 (14%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE-----FQSEVYVLNFARH 78
+ S + ++G G FG V G LK V + G+ E F E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI-------GTA 131
NI+ L G K ++V EY+ N SL +S L H I G A
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG---T 188
G+++L + +HRD+ NIL+ + V + DFGL+R D G
Sbjct: 158 SGMKYLSDMG----YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 189 LGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLA 248
+ + +PE + +DV+++GI+L ++MS GE P + + +I+ +
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSN--QDVIKAVD 264
Query: 249 LHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ P ++ Y+L L C Q++ RP ++V +L+
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD------CWQKDRNNRPKFEQIVSILD 305
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEA-------STQGFAEFQSEVYVLNFARHKNIVM 83
LG GG VY L + ++ KV +A + F+ EV+ + H+NIV
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD----NTESVLEWHQRYAAAIGTAKGLRFLHE 139
++ +++ LV EYI +L ++ + ++ + + + I A +R
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR---- 131
Query: 140 ECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTK-ILGTLGYLAPEYAE 198
I+HRD++P NIL+ + + DFG+A+ + QT +LGT+ Y +PE A+
Sbjct: 132 ------IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK 185
Query: 199 NGIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
TD+Y+ GI+L +++ G NGE
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEP--PFNGE 215
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 16 SEIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVY 71
S+ Q A DF LG+G FG+VY K + I A KV +A + + + EV
Sbjct: 5 SKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 64
Query: 72 VLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAA 126
+ + RH NI+ L G+ L+ EY +++ L FD QR A
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTAT 116
Query: 127 AIGT-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTK 184
I A L + C +IHRD++P N+LL + DFG W +T
Sbjct: 117 YITELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTT 169
Query: 185 ILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
+ GTL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 120/285 (42%), Gaps = 45/285 (15%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 83 MLLGFCCKENLNILVYEYICN-KSLHWHLFDNTESVLEWHQRY----------AAAIGTA 131
LLG C K ++V C +L +L + + Y + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTL 189
KG+ FL IHRD+ NILL+ V + DFGLAR +K D + L
Sbjct: 155 KGMEFLASR----KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEPLIEK 246
++APE + + +I++DV++FG++L ++ S G P ++ ++ L E
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEG 263
Query: 247 LALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
+ Y T E+Y +T C P RP+ E+V
Sbjct: 264 TRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 298
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 121/282 (42%), Gaps = 32/282 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE-----FQSEVYVLNFARH 78
+ S + ++G G FG V G LK V + G+ E F E ++ H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSLHWHL--FDNTESVLEWHQRYAAAIGTAKGLRF 136
NI+ L G K ++V EY+ N SL L D +V+ Q G A G+++
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKY 150
Query: 137 LHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG---TLGYLA 193
L + +HRD+ NIL+ + V + DFGL+R D G + + +
Sbjct: 151 LSDMG----YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 206
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE + +DV+++GI+L ++MS GE P + + +I+ + +
Sbjct: 207 PEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSN--QDVIKAVDEGYRL 257
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
P ++ Y+L L C Q++ RP ++V +L+
Sbjct: 258 PPPMDCPAALYQLMLD------CWQKDRNNRPKFEQIVSILD 293
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 17 EIQQATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQS---EVYV 72
+I+ DF +LG+G FG V+ E K Q A K K+ + + E V
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 73 LNFARHKNIV--MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGT 130
L+ A + M F KENL V EY+ L +H+ + L YAA I
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENL-FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI-- 127
Query: 131 AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLG 190
GL+FLH + I++RD++ NILL D + DFG+ + D GT
Sbjct: 128 ILGLQFLHSKG----IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPD 183
Query: 191 YLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEE 231
Y+APE + D ++FG++L +++ G+ EE
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE 224
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 86 GFCC---KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ E++ SL E+ Q++ I K L++ + C+
Sbjct: 81 GVCYSAGRRNLK-LIMEFLPYGSLR-----------EYLQKHKERIDHIKLLQYTSQICK 128
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHRD+ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--- 185
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 186 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 242 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 286
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY ++ L FD QR A I
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE--------QRTATYIT 120
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 121 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCG 173
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 115
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T++ G
Sbjct: 116 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTELCG 168
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 31 LGEGGFGHVY----KGELKD---GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG VY KG +KD ++ V + AS + EF +E V+ ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHL------FDNTESVL--EWHQRYAAAIGTAKGLR 135
LLG + +++ E + L +L +N + + A A G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
+L+ +HRD+ N + DF +GDFG+ R ++T K L + +++
Sbjct: 140 YLN----ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE ++G+ + +DV++FG++L ++ + E+P Q L E ++ + L+
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN--EQVLRFVMEGGLL 246
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
D + +N D ++ + +C Q NP+ RPS E++ ++ E
Sbjct: 247 D-KPDNCPD-----MLLELMRMCWQYNPKMRPSFLEIISSIKEE 284
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 141
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 142 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCG 194
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 42/287 (14%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE-----FQSEVYVLNFARH 78
+ S + ++G G FG V G LK V + G+ E F E ++ H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI-------GTA 131
NI+ L G K ++V EY+ N SL +S L H I G A
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSL--------DSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG---T 188
G+++L + +HRD+ NIL+ + V + DFGL+R D G
Sbjct: 129 SGMKYLSDMG----YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 189 LGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLA 248
+ + +PE + +DV+++GI+L ++MS GE P + + +I+ +
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSN--QDVIKAVD 235
Query: 249 LHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ P ++ Y+L L C Q++ RP ++V +L+
Sbjct: 236 EGYRLPPPMDCPAALYQLMLD------CWQKDRNNRPKFEQIVSILD 276
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 13/208 (6%)
Query: 30 LLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQ---SEVYVLNFARHKNIVMLL 85
+LG+G FG V +K+ G + A KV K+ + + +E +L+ AR+ + L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 86 GFCCKENLNIL--VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
FCC + + L V E++ L +H+ + + YAA I +A L FLH++
Sbjct: 90 -FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISA--LMFLHDKG-- 144
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVS 203
II+RD++ N+LL H+ L DFG+ + + GT Y+APE + +
Sbjct: 145 --IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYG 202
Query: 204 IRTDVYAFGIILLQLMSGRKVVDMNGEE 231
D +A G++L +++ G + E+
Sbjct: 203 PAVDWWAMGVLLYEMLCGHAPFEAENED 230
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 21 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 80
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 132
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 133 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCG 185
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 186 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 226
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 118
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 119 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCG 171
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 120/285 (42%), Gaps = 45/285 (15%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 83 MLLGFCCKENLNILVYEYICN-KSLHWHLFDNTESVLEWHQRYAA----------AIGTA 131
LLG C K ++V C +L +L + + Y + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTL 189
KG+ FL IHRD+ NILL+ V + DFGLAR +K D + L
Sbjct: 155 KGMEFLASR----KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEPLIEK 246
++APE + + +I++DV++FG++L ++ S G P ++ ++ L E
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFXRRLKEG 263
Query: 247 LALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
+ Y T E+Y +T C P RP+ E+V
Sbjct: 264 TRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 298
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 115
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 116 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTDLCG 168
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 114
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 115 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCG 167
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 168 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 120
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 121 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCG 173
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 118
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 119 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCG 171
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 115
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 116 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTDLCG 168
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 115
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 116 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTXLCG 168
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 120
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 121 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTDLCG 173
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 26/267 (9%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G G FG V+ G + +A K KE S +F E V+ H +V L G C +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
+ LV+E++ + L +L + + +G+ +L E C +IHRD
Sbjct: 94 QAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC----VIHRD 148
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+ N L+ + V + DFG+ R+ D T GT + + +PE S ++D
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELY 267
V++FG+++ ++ S K+ N R +E + + L PR+ +++
Sbjct: 207 VWSFGVLMWEVFSEGKIPYEN--------RSNSEVVEDISTGFRLYKPRLASTH------ 252
Query: 268 LMAKTAYLCVQRNPEGRPSMGEVVRLL 294
+ + C + PE RP+ ++R L
Sbjct: 253 -VYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 115
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 116 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCG 168
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 116
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 117 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTDLCG 169
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 119/287 (41%), Gaps = 47/287 (16%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 83 MLLGFCCKENLNILVYEYIC-------------NKSLHWHLFDNTESVLEWHQRYAAAIG 129
LLG C K ++V C N+ + + D + L +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILG 187
AKG+ FL IHRD+ NILL+ V + DFGLAR K D +
Sbjct: 157 VAKGMEFLASR----KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEPLI 244
L ++APE + + +I++DV++FG++L ++ S G P ++ ++ L
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLK 265
Query: 245 EKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
E + Y T E+Y +T C P RP+ E+V
Sbjct: 266 EGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 302
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 46/249 (18%)
Query: 9 DPMKFSFSEIQQATGDFSKENL-----LGEGGFGHVYK----GELKDGQMIAAKVRKEAS 59
DP + ++E +F + NL LG G FG V + G K+ ++ V+ S
Sbjct: 16 DPTQLPYNE----KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS 71
Query: 60 TQGFAE---FQSEVYVLN-FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTE 115
T E SE+ +++ +H+NIV LLG C +++ EY C L L E
Sbjct: 72 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAE 131
Query: 116 SVL---------------------EWHQRYAAAIGTAKGLRFL-HEECRGGPIIHRDMRP 153
++L E + A+G+ FL + C IHRD+
Sbjct: 132 AMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC-----IHRDVAA 186
Query: 154 SNILLTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYAENGIVSIRTDVYAF 211
N+LLT+ V +GDFGLAR D V+ + ++APE + + ++++DV+++
Sbjct: 187 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 246
Query: 212 GIILLQLMS 220
GI+L ++ S
Sbjct: 247 GILLWEIFS 255
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 118/284 (41%), Gaps = 39/284 (13%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
DF + L+G GGFG V+K + + DG+ K K + + + EV L H NIV
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIV 67
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTE-----SVLEW-HQRYAAAIGTAKGLRF 136
G + + ++S LF E ++ +W +R + L
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 137 LHEECRGGPIIH------RDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLG 190
+ +G IH RD++PSNI L +GDFGL +D + + GTL
Sbjct: 128 FEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT-SLKNDGKRXRSKGTLR 186
Query: 191 YLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALH 250
Y++PE + D+YA G+IL +L+ V D E +
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTAFETSK--------------FFT 229
Query: 251 ELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLL 294
+L D I + +D E L+ K + + PE RP+ E++R L
Sbjct: 230 DLRDGIISDIFDKKEKTLLQK----LLSKKPEDRPNTSEILRTL 269
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 15/211 (7%)
Query: 17 EIQQATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKV-----RKEASTQGFAEFQSEV 70
+++ + K + LGEG F VYK K+ Q++A K R EA E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 71 YVLNFARHKNIVMLL-GFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIG 129
+L H NI+ LL F K N++ LV++++ L + DN+ + H + A +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNIS-LVFDFM-ETDLEVIIKDNSLVLTPSHIK-AYMLM 120
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL 189
T +GL +LH+ I+HRD++P+N+LL + V L DFGLA+ + + + T
Sbjct: 121 TLQGLEYLHQHW----ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR 176
Query: 190 GYLAPEYAENG-IVSIRTDVYAFGIILLQLM 219
Y APE + + D++A G IL +L+
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L+D G+++A K + ++ + +F+ E+ +L +H NIV
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 86 GFCC---KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C + NL L+ EY+ SL +L Q++ I K L++ + C+
Sbjct: 79 GVCYSAGRRNLK-LIMEYLPYGSLRDYL-----------QKHKERIDHIKLLQYTSQICK 126
Query: 143 G------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G IHR++ NIL+ ++ +GDFGL + D +P ++ I
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF--- 183
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+ APE S+ +DV++FG++L +L + ++ + P + +R ++ +
Sbjct: 184 -WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIV 239
Query: 250 HELID--------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
LI+ PR + D E+Y++ C N RPS ++
Sbjct: 240 FHLIELLKNNGRLPRPDGCPD--EIYMIMTE---CWNNNVNQRPSFRDLA 284
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K+ + I A KV +A + + + EV + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 115
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W + + G
Sbjct: 116 ELANALSY----CHSKKVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRAALCG 168
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 34/296 (11%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG++FL +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASK--- 152
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTL--GYLAPEYAEN 199
+HRD+ N +L F + DFGLAR + D V K L ++A E +
Sbjct: 153 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
+ ++DV++FG++L +LM+ G P + + + + L L+ P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT-------RGAPPYPDVNTF-DITVYLLQGRRLLQPE--- 260
Query: 260 SYDTYELY-LMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDRFHHLGEKFVQRHHT 314
Y LY +M K C E RPS E+V + F +GE +V + T
Sbjct: 261 -YCPDPLYEVMLK----CWHPKAEMRPSFSELVSRISAIFSTF--IGEHYVHVNAT 309
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 112
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 113 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCG 165
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 166 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 206
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 34/296 (11%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG++FL +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASK--- 152
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTL--GYLAPEYAEN 199
+HRD+ N +L F + DFGLAR + D V K L ++A E +
Sbjct: 153 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
+ ++DV++FG++L +LM+ G P + + + + L L+ P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT-------RGAPPYPDVNTF-DITVYLLQGRRLLQPE--- 260
Query: 260 SYDTYELY-LMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDRFHHLGEKFVQRHHT 314
Y LY +M K C E RPS E+V + F +GE +V + T
Sbjct: 261 -YCPDPLYEVMLK----CWHPKAEMRPSFSELVSRISAIFSTF--IGEHYVHVNAT 309
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 34/296 (11%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG++FL +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASK--- 150
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTL--GYLAPEYAEN 199
+HRD+ N +L F + DFGLAR + D V K L ++A E +
Sbjct: 151 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
+ ++DV++FG++L +LM+ G P + + + + L L+ P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMT-------RGAPPYPDVNTF-DITVYLLQGRRLLQPE--- 258
Query: 260 SYDTYELY-LMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDRFHHLGEKFVQRHHT 314
Y LY +M K C E RPS E+V + F +GE +V + T
Sbjct: 259 -YCPDPLYEVMLK----CWHPKAEMRPSFSELVSRISAIFSTF--IGEHYVHVNAT 307
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 116
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 117 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSCHAPSSRRTTLSG 169
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 34/296 (11%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG++FL +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASK--- 153
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTL--GYLAPEYAEN 199
+HRD+ N +L F + DFGLAR + D V K L ++A E +
Sbjct: 154 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
+ ++DV++FG++L +LM+ G P + + + + L L+ P
Sbjct: 213 QKFTTKSDVWSFGVLLWELMT-------RGAPPYPDVNTF-DITVYLLQGRRLLQPE--- 261
Query: 260 SYDTYELY-LMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDRFHHLGEKFVQRHHT 314
Y LY +M K C E RPS E+V + F +GE +V + T
Sbjct: 262 -YCPDPLYEVMLK----CWHPKAEMRPSFSELVSRISAIFSTF--IGEHYVHVNAT 310
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 34/296 (11%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG++FL +
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASK--- 157
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTL--GYLAPEYAEN 199
+HRD+ N +L F + DFGLAR + D V K L ++A E +
Sbjct: 158 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
+ ++DV++FG++L +LM+ G P + + + + L L+ P
Sbjct: 217 QKFTTKSDVWSFGVLLWELMT-------RGAPPYPDVNTF-DITVYLLQGRRLLQPE--- 265
Query: 260 SYDTYELY-LMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDRFHHLGEKFVQRHHT 314
Y LY +M K C E RPS E+V + F +GE +V + T
Sbjct: 266 -YCPDPLYEVMLK----CWHPKAEMRPSFSELVSRISAIFSTF--IGEHYVHVNAT 314
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 120
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W +T + G
Sbjct: 121 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCG 173
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + D+++ G++ + + G+ + N
Sbjct: 174 TLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 34/296 (11%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG++FL +
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASK--- 211
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTL--GYLAPEYAEN 199
+HRD+ N +L F + DFGLAR + D V K L ++A E +
Sbjct: 212 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
+ ++DV++FG++L +LM+ G P + + + + L L+ P
Sbjct: 271 QKFTTKSDVWSFGVLLWELMT-------RGAPPYPDVNTF-DITVYLLQGRRLLQPE--- 319
Query: 260 SYDTYELY-LMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDRFHHLGEKFVQRHHT 314
Y LY +M K C E RPS E+V + F +GE +V + T
Sbjct: 320 -YCPDPLYEVMLK----CWHPKAEMRPSFSELVSRISAIFSTF--IGEHYVHVNAT 368
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 83 MLLGFCCKENLNILVYEYIC-------------NKSLHWHLF--DNTESVLEWHQRYAAA 127
LLG C K ++V C N+ + + + D + L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKI 185
AKG+ FL IHRD+ NILL+ V + DFGLAR +K D +
Sbjct: 155 FQVAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 186 LGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEP 242
L ++APE + + +I++DV++FG++L ++ S G P ++ ++
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 263
Query: 243 LIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
L E + Y T E+Y +T C P RP+ E+V
Sbjct: 264 LKEGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 302
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHV----YKGELKD-GQMIAAK-VRKEASTQGFAEFQSEVYVLNFARHKNIVML 84
LGEG FG V Y E + G+ +A K ++ E+ A+ + E+ +L H+NIV
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 85 LGFCCKENLN--ILVYEYICNKSLHWHLFDNTESV-LEWHQRYAAAIGTAKGLRFLHEEC 141
G C ++ N L+ E++ + SL +L N + L+ +YA I KG+ +L
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI--CKGMDYLGSR- 145
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD---PVQTKILGTLGYLAPEYAE 198
+HRD+ N+L+ + +GDFGL + TD V+ + + APE
Sbjct: 146 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 199 NGIVSIRTDVYAFGIILLQLMS 220
I +DV++FG+ L +L++
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 30 LLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFC 88
+LG+G +G VY G +L + IA K E ++ E+ + +HKNIV LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 89 CKENLNILVYEYICNKSLH------WHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ + E + SL W + E + ++ + +GL++LH+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLHDN-- 141
Query: 143 GGPIIHRDMRPSNILL-THDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
I+HRD++ N+L+ T+ V + DFG ++ +P GTL Y+APE + G
Sbjct: 142 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 202 --VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSL 236
D+++ G ++++ +G+ G EPQ ++
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPFYELG-EPQAAM 235
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 83 MLLGFCCKENLNILVYEYIC-------------NKSLHWHLF--DNTESVLEWHQRYAAA 127
LLG C K ++V C N+ + + + D + L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKI 185
AKG+ FL IHRD+ NILL+ V + DFGLAR +K D +
Sbjct: 146 FQVAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 186 LGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEP 242
L ++APE + + +I++DV++FG++L ++ S G P ++ ++
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 254
Query: 243 LIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
L E + Y T E+Y +T C P RP+ E+V
Sbjct: 255 LKEGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 293
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 83 MLLGFCCKENLNILVYEYIC-------------NKSLHWHLF--DNTESVLEWHQRYAAA 127
LLG C K ++V C N+ + + + D + L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKI 185
AKG+ FL IHRD+ NILL+ V + DFGLAR +K D +
Sbjct: 146 FQVAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 186 LGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEP 242
L ++APE + + +I++DV++FG++L ++ S G P ++ ++
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 254
Query: 243 LIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
L E + Y T E+Y +T C P RP+ E+V
Sbjct: 255 LKEGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 293
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 30 LLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFC 88
+LG+G +G VY G +L + IA K E ++ E+ + +HKNIV LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 89 CKENLNILVYEYICNKSLH------WHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
+ + E + SL W + E + ++ + +GL++LH+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLHDN-- 127
Query: 143 GGPIIHRDMRPSNILL-THDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
I+HRD++ N+L+ T+ V + DFG ++ +P GTL Y+APE + G
Sbjct: 128 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP 185
Query: 202 --VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSL 236
D+++ G ++++ +G+ G EPQ ++
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPFYELG-EPQAAM 221
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 125/306 (40%), Gaps = 51/306 (16%)
Query: 14 SFSEIQQATGDFSKE---------NLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFA 64
+F + Q +F+KE ++G G FG V G LK V + G+
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 65 E-----FQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLE 119
E F E ++ H NI+ L G K ++V E + N SL +S L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL--------DSFLR 138
Query: 120 WHQRYAAAI-------GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA 172
H I G A G+++L + +HRD+ NIL+ + V + DFGL+
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMG----AVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 173 RWKTTDDPVQTKILG---TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNG 229
R D G + + +PE + +DV+++GI+L ++MS G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YG 247
Query: 230 EEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGE 289
E P + + +I+ + + P ++ Y+L L C Q++ RP +
Sbjct: 248 ERPYWEMSN--QDVIKAVDEGYRLPPPMDCPAALYQLMLD------CWQKDRNNRPKFEQ 299
Query: 290 VVRLLE 295
+V +L+
Sbjct: 300 IVSILD 305
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSF---- 118
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN- 199
C ++HRD++P N+L+ + L DFGLAR T + TL Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 63 IVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF---- 117
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN- 199
C ++HRD++P N+L+ + L DFGLAR T + TL Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 118
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN- 199
C ++HRD++P N+L+ + L DFGLAR T + TL Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 117
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN- 199
C ++HRD++P N+L+ + L DFGLAR T + TL Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 31 LGEGGFGHV----YKGELKD-GQMIAAK-VRKEASTQGFAEFQSEVYVLNFARHKNIVML 84
LGEG FG V Y E + G+ +A K ++ E+ A+ + E+ +L H+NIV
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 85 LGFCCKENLN--ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G C ++ N L+ E++ + SL +L N + Q+ A+ KG+ +L
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI-NLKQQLKYAVQICKGMDYLGSR-- 133
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD---PVQTKILGTLGYLAPEYAEN 199
+HRD+ N+L+ + +GDFGL + TD V+ + + APE
Sbjct: 134 --QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 191
Query: 200 GIVSIRTDVYAFGIILLQLMS 220
I +DV++FG+ L +L++
Sbjct: 192 SKFYIASDVWSFGVTLHELLT 212
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 122
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN- 199
C ++HRD++P N+L+ + L DFGLAR T + TL Y APE
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 182
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 213
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 20/226 (8%)
Query: 9 DPMKFSFSEIQQATGD------FSKENLLGEGGFGHVYK-GELKDGQMIAAKVRKEASTQ 61
DP EI D + + LG+GGF Y+ ++ ++ A KV ++
Sbjct: 6 DPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSML- 64
Query: 62 GFAEFQSEVYVLNFARHKN-----IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTES 116
Q E A HK+ +V GF ++ +V E IC + L ++
Sbjct: 65 -LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE-ICRRRSLLELHKRRKA 122
Query: 117 VLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT 176
V E RY T +G+++LH +IHRD++ N+ L D +GDFGLA
Sbjct: 123 VTEPEARYFMR-QTIQGVQYLH----NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 177
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGR 222
D + + GT Y+APE S D+++ G IL L+ G+
Sbjct: 178 FDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 117
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN- 199
C ++HRD++P N+L+ + L DFGLAR T + TL Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 118
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN- 199
C ++HRD++P N+L+ + L DFGLAR T + TL Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 117
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN- 199
C ++HRD++P N+L+ + L DFGLAR T + TL Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 30 LLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQG---FAEFQSEVYVLNFARHKNIVMLL 85
+LG GG V+ +L+D + +A KV + + + F+ E H IV +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 86 GFCCKEN----LNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
E L +V EY+ +L + +TE + + + L F H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW--KTTDDPVQTK-ILGTLGYLAPEYAE 198
IIHRD++P+NI+++ + DFG+AR + + QT ++GT YL+PE A
Sbjct: 137 ----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 199 NGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWA-EPLIEKLALHELIDPRI 257
V R+DVY+ G +L ++++G G+ P Q E I A HE +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEP--PFTGDSPDSVAYQHVREDPIPPSARHE----GL 246
Query: 258 ENSYDTYELYLMAKTAYLCVQRNPEGR 284
D L +AK NPE R
Sbjct: 247 SADLDAVVLKALAK--------NPENR 265
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 115
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W + + G
Sbjct: 116 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRAALCG 168
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 130/281 (46%), Gaps = 30/281 (10%)
Query: 34 GGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCKENL 93
G FG V+K +L + + +A K+ Q + + + EVY L +H+NI+ +G K
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSW-QNEYEVYSLPGMKHENILQFIG-AEKRGT 91
Query: 94 NI-----LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG----- 143
++ L+ + SL L N V+ W++ A A+GL +LHE+ G
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 144 -GPIIHRDMRPSNILLTHDFVPMLGDFGLA-RWKTTDDPVQTK-ILGTLGYLAPEYAENG 200
I HRD++ N+LL ++ + DFGLA +++ T +GT Y+APE E
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGA 208
Query: 201 I-----VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQ--WAEPLIE---KLALH 250
I +R D+YA G++L +L S D +E + P +E ++ +H
Sbjct: 209 INFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVH 268
Query: 251 ELIDPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEV 290
+ P + + + + + ++ +T C + E R S G V
Sbjct: 269 KKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCV 309
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 44/292 (15%)
Query: 3 TELYMKDPMKFSFSEIQQATGDFSKENLLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQ 61
EL+ KD + FS++++ +G G FG VY ++++ +++A K + Q
Sbjct: 44 AELFFKDDPEKLFSDLRE----------IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ 93
Query: 62 GFAEFQS---EVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVL 118
++Q EV L RH N + G +E+ LV EY + L + + L
Sbjct: 94 SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPL 151
Query: 119 EWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD 178
+ + A G +GL +LH +IHRD++ NILL+ + LGDFG A
Sbjct: 152 QEVEIAAVTHGALQGLAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207
Query: 179 DPVQTKILGTLGYLAPEY---AENGIVSIRTDVYAFGIILLQLMSGR-KVVDMNGEEPQQ 234
+ +GT ++APE + G + DV++ GI ++L + + +MN
Sbjct: 208 N----XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY 263
Query: 235 SLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPS 286
+ Q P ++ E N D+ C+Q+ P+ RP+
Sbjct: 264 HIAQNESPALQSGHWSEY----FRNFVDS------------CLQKIPQDRPT 299
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 26/267 (9%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G G FG V+ G + +A K +E + +F E V+ H +V L G C +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
+ LV+E++ + L +L + + +G+ +L E C +IHRD
Sbjct: 74 QAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC----VIHRD 128
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+ N L+ + V + DFG+ R+ D T GT + + +PE S ++D
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELY 267
V++FG+++ ++ S K+ N R +E + + L PR+ +++
Sbjct: 187 VWSFGVLMWEVFSEGKIPYEN--------RSNSEVVEDISTGFRLYKPRLASTH------ 232
Query: 268 LMAKTAYLCVQRNPEGRPSMGEVVRLL 294
+ + C + PE RP+ ++R L
Sbjct: 233 -VYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY ++ L FD QR A I
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE--------QRTATYIT 120
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W + + G
Sbjct: 121 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRXXLXG 173
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 118
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPE-YAEN 199
C ++HRD++P N+L+ + L DFGLAR T + TL Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 178
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 125
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN- 199
C ++HRD++P N+L+ + L DFGLAR T + TL Y APE
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 185
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 216
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 125
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN- 199
C ++HRD++P N+L+ + L DFGLAR T + TL Y APE
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 185
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 216
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 119
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN- 199
C ++HRD++P N+L+ + L DFGLAR T + TL Y APE
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 179
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 118
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN- 199
C ++HRD++P N+L+ + L DFGLAR T + TL Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 117
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + +FG W +T + G
Sbjct: 118 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIANFG---WSVHAPSSRRTTLCG 170
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 118
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + +FG W +T + G
Sbjct: 119 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIANFG---WSVHAPSSRRTTLCG 171
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 44/292 (15%)
Query: 3 TELYMKDPMKFSFSEIQQATGDFSKENLLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQ 61
EL+ KD + FS++++ +G G FG VY ++++ +++A K + Q
Sbjct: 5 AELFFKDDPEKLFSDLRE----------IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ 54
Query: 62 GFAEFQS---EVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVL 118
++Q EV L RH N + G +E+ LV EY + L + + L
Sbjct: 55 SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPL 112
Query: 119 EWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD 178
+ + A G +GL +LH +IHRD++ NILL+ + LGDFG A
Sbjct: 113 QEVEIAAVTHGALQGLAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168
Query: 179 DPVQTKILGTLGYLAPEY---AENGIVSIRTDVYAFGIILLQLMSGR-KVVDMNGEEPQQ 234
+ +GT ++APE + G + DV++ GI ++L + + +MN
Sbjct: 169 N----XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY 224
Query: 235 SLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPS 286
+ Q P ++ E N D+ C+Q+ P+ RP+
Sbjct: 225 HIAQNESPALQSGHWSEY----FRNFVDS------------CLQKIPQDRPT 260
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 123/297 (41%), Gaps = 52/297 (17%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
DF + L+G GGFG V+K + + DG+ + K + + + EV L H NIV
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIV 68
Query: 83 MLLGF---------CCKENLNILVYE----YICNKSLHWHLFDNTE-----SVLEW-HQR 123
G ++L Y+ ++S LF E ++ +W +R
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 124 YAAAIGTAKGLRFLHEECRG------GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTT 177
+ L + +G +IHRD++PSNI L +GDFGL
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVT-SLK 187
Query: 178 DDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR 237
+D +T+ GTL Y++PE + D+YA G+IL +L+ V D E +
Sbjct: 188 NDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTAFETSK---- 240
Query: 238 QWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLL 294
+L D I + +D E L+ K + + PE RP+ E++R L
Sbjct: 241 ----------FFTDLRDGIISDIFDKKEKTLLQK----LLSKKPEDRPNTSEILRTL 283
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 83 MLLGFCCKENLNILVYEYIC-------------NKSLHWHLF--DNTESVLEWHQRYAAA 127
LLG C K ++V C N+ + + + D + L +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKI 185
AKG+ FL IHRD+ NILL+ V + DFGLAR +K D +
Sbjct: 192 FQVAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 186 LGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEP 242
L ++APE + + +I++DV++FG++L ++ S G P ++ ++
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 300
Query: 243 LIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
L E + Y T E+Y +T C P RP+ E+V
Sbjct: 301 LKEGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 339
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 83 MLLGFCCKENLNILVYEYIC-------------NKSLHWHLF--DNTESVLEWHQRYAAA 127
LLG C K ++V C N+ + + + D + L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKI 185
AKG+ FL IHRD+ NILL+ V + DFGLAR +K D +
Sbjct: 155 FQVAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 186 LGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEP 242
L ++APE + + +I++DV++FG++L ++ S G P ++ ++
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 263
Query: 243 LIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
L E + Y T E+Y +T C P RP+ E+V
Sbjct: 264 LKEGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 302
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 20/226 (8%)
Query: 9 DPMKFSFSEIQQATGD------FSKENLLGEGGFGHVYK-GELKDGQMIAAKVRKEASTQ 61
DP EI D + + LG+GGF Y+ ++ ++ A KV ++
Sbjct: 22 DPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSML- 80
Query: 62 GFAEFQSEVYVLNFARHKN-----IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTES 116
Q E A HK+ +V GF ++ +V E IC + L ++
Sbjct: 81 -LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE-ICRRRSLLELHKRRKA 138
Query: 117 VLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT 176
V E RY T +G+++LH +IHRD++ N+ L D +GDFGLA
Sbjct: 139 VTEPEARYFMR-QTIQGVQYLH----NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 193
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGR 222
D + + GT Y+APE S D+++ G IL L+ G+
Sbjct: 194 FDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 129/302 (42%), Gaps = 37/302 (12%)
Query: 11 MKFSFSEIQQATGDFSKE---------NLLGEGGFGHVYKGELK-DGQM---IAAKVRKE 57
M ++ + QA +F+KE ++G G FG V G LK G+ +A K K
Sbjct: 1 MPHTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKV 60
Query: 58 ASTQG-FAEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTES 116
T+ +F E ++ H NI+ L G K ++V EY+ N SL L N +
Sbjct: 61 GYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKN-DG 119
Query: 117 VLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT 176
Q G + G+++L + +HRD+ NIL+ + V + DFGL+R
Sbjct: 120 QFTVIQLVGMLRGISAGMKYLSDMG----YVHRDLAARNILINSNLVCKVSDFGLSRVLE 175
Query: 177 TDDPVQTKILG---TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQ 233
D G + + APE + +DV+++GI++ +++S GE P
Sbjct: 176 DDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS-------YGERPY 228
Query: 234 QSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRL 293
+ + +I+ + + ++ Y+L L C Q+ RP E+V +
Sbjct: 229 WEMTN--QDVIKAVEEGYRLPSPMDCPAALYQLMLD------CWQKERNSRPKFDEIVNM 280
Query: 294 LE 295
L+
Sbjct: 281 LD 282
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 141
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W + + G
Sbjct: 142 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRDDLCG 194
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESV------LEWHQRYAAAIGTAKGL 134
IV LL EN LV+E+ LH L D ++ L + Y + +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQL--LQGL 116
Query: 135 RFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYL 192
F C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y
Sbjct: 117 AF----CHSHRVLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYR 170
Query: 193 APEYAEN-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
APE S D+++ G I ++++ R + + E
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 26/267 (9%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G G FG V+ G + +A K +E + +F E V+ H +V L G C +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
+ LV+E++ + L +L + + +G+ +L E C +IHRD
Sbjct: 72 QAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC----VIHRD 126
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+ N L+ + V + DFG+ R+ D T GT + + +PE S ++D
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELY 267
V++FG+++ ++ S K+ N R +E + + L PR+ +++
Sbjct: 185 VWSFGVLMWEVFSEGKIPYEN--------RSNSEVVEDISTGFRLYKPRLASTH------ 230
Query: 268 LMAKTAYLCVQRNPEGRPSMGEVVRLL 294
+ + C + PE RP+ ++R L
Sbjct: 231 -VYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 118
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W + + G
Sbjct: 119 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRXXLCG 171
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 20/226 (8%)
Query: 9 DPMKFSFSEIQQATGD------FSKENLLGEGGFGHVYK-GELKDGQMIAAKVRKEASTQ 61
DP EI D + + LG+GGF Y+ ++ ++ A KV ++
Sbjct: 22 DPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSML- 80
Query: 62 GFAEFQSEVYVLNFARHKN-----IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTES 116
Q E A HK+ +V GF ++ +V E IC + L ++
Sbjct: 81 -LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE-ICRRRSLLELHKRRKA 138
Query: 117 VLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT 176
V E RY T +G+++LH +IHRD++ N+ L D +GDFGLA
Sbjct: 139 VTEPEARYFMR-QTIQGVQYLH----NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 193
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGR 222
D + + GT Y+APE S D+++ G IL L+ G+
Sbjct: 194 FDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESV----LEWHQRYAAAIGTAKGLRF 136
IV LL EN LV+E++ S+ F + ++ L + Y + +GL F
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 121
Query: 137 LHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAP 194
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y AP
Sbjct: 122 ----CHSHRVLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAP 175
Query: 195 EYAEN-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
E S D+++ G I ++++ R + + E
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 117
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W + + G
Sbjct: 118 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRXXLCG 170
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 20/226 (8%)
Query: 9 DPMKFSFSEIQQATGD------FSKENLLGEGGFGHVYK-GELKDGQMIAAKVRKEASTQ 61
DP EI D + + LG+GGF Y+ ++ ++ A KV ++
Sbjct: 22 DPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSML- 80
Query: 62 GFAEFQSEVYVLNFARHKN-----IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTES 116
Q E A HK+ +V GF ++ +V E IC + L ++
Sbjct: 81 -LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE-ICRRRSLLELHKRRKA 138
Query: 117 VLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT 176
V E RY T +G+++LH +IHRD++ N+ L D +GDFGLA
Sbjct: 139 VTEPEARYFMR-QTIQGVQYLH----NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 193
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGR 222
D + + GT Y+APE S D+++ G IL L+ G+
Sbjct: 194 FDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 120/289 (41%), Gaps = 49/289 (16%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 83 MLLGFCCKENLNILVYEYIC-------------NKSLHWHLF--DNTESVLEWHQRYAAA 127
LLG C K ++V C N+ + + + D + L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKI 185
AKG+ FL IHRD+ NILL+ V + DFGLAR K D +
Sbjct: 146 FQVAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 186 LGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEP 242
L ++APE + + +I++DV++FG++L ++ S G P ++ ++
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 254
Query: 243 LIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
L E + Y T E+Y +T C P RP+ E+V
Sbjct: 255 LKEGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 293
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 28/268 (10%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G G FG V+ G + +A K +E + +F E V+ H +V L G C +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
+ LV+E++ + L +L + + +G+ +L E C +IHRD
Sbjct: 77 QAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC----VIHRD 131
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+ N L+ + V + DFG+ R+ D T GT + + +PE S ++D
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL-HELIDPRIENSYDTYEL 266
V++FG+++ ++ S K+ N + ++E ++ L PR+ +++
Sbjct: 190 VWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH----- 235
Query: 267 YLMAKTAYLCVQRNPEGRPSMGEVVRLL 294
+ + C + PE RP+ ++R L
Sbjct: 236 --VYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 115
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W + + G
Sbjct: 116 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRXXLCG 168
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 117
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF---- 121
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESV----LEWHQRYAAAIGTAKGLRF 136
IV LL EN LV+E++ S+ F + ++ L + Y + +GL F
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 119
Query: 137 LHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAP 194
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y AP
Sbjct: 120 ----CHSHRVLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAP 173
Query: 195 EYAEN-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
E S D+++ G I ++++ R + + E
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 97/227 (42%), Gaps = 23/227 (10%)
Query: 21 ATGDFSKENLLGEGGFGHVYKG-ELKDGQMIAAK-VRKEASTQGFA-EFQSEVYVLNFAR 77
AT + +G G +G VYK + G +A K VR +G EV +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 78 ---HKNIVMLLGFCCKENLN-----ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIG 129
H N+V L+ C + LV+E++ ++ L +L L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR---WKTTDDPVQTKIL 186
+GL FLH C I+HRD++P NIL+T L DFGLAR ++ DPV +
Sbjct: 121 FLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPV----V 172
Query: 187 GTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQ 233
TL Y APE + D+++ G I ++ + + N E Q
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 219
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 12/202 (5%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQS--EVYVLNFARHKNI 81
+ K +GEG +G V+K +D GQ++A K E+ + + E+ +L +H N+
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNL 64
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHE-E 140
V LL ++ LV+EY C+ ++ H D + + H + T + + F H+
Sbjct: 65 VNLLEVFRRKRRLHLVFEY-CDHTV-LHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPE-YAEN 199
C IHRD++P NIL+T V L DFG AR T + T Y +PE +
Sbjct: 123 C-----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD 177
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
DV+A G + +L+SG
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSG 199
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 42/287 (14%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE-----FQSEVYVLNFARH 78
+ S + ++G G FG V G LK V + G+ E F E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI-------GTA 131
NI+ L G K ++V E + N SL +S L H I G A
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSL--------DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG---T 188
G+++L + +HRD+ NIL+ + V + DFGL+R D G
Sbjct: 158 SGMKYLSDMG----YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 189 LGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLA 248
+ + +PE + +DV+++GI+L ++MS GE P + + +I+ +
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSN--QDVIKAVD 264
Query: 249 LHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
+ P ++ Y+L L C Q++ RP ++V +L+
Sbjct: 265 EGYRLPPPMDCPAALYQLMLD------CWQKDRNNRPKFEQIVSILD 305
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 118
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 34/296 (11%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG++FL +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASK--- 153
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTL--GYLAPEYAEN 199
+HRD+ N +L F + DFGLAR D V K L ++A E +
Sbjct: 154 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
+ ++DV++FG++L +LM+ G P + + + + L L+ P
Sbjct: 213 QKFTTKSDVWSFGVLLWELMT-------RGAPPYPDVNTF-DITVYLLQGRRLLQPE--- 261
Query: 260 SYDTYELY-LMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDRFHHLGEKFVQRHHT 314
Y LY +M K C E RPS E+V + F +GE +V + T
Sbjct: 262 -YCPDPLYEVMLK----CWHPKAEMRPSFSELVSRISAIFSTF--IGEHYVHVNAT 310
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 67 IVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 121
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 118
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W + + G
Sbjct: 119 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRAALCG 171
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 119
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 118
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 117
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 13/216 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 118
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQ 233
S D+++ G I ++++ R + + E Q
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 120
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 121
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 120
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 118
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W + + G
Sbjct: 119 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRDDLCG 171
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 30 LLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQG---FAEFQSEVYVLNFARHKNIVMLL 85
+LG GG V+ +L+D + +A KV + + + F+ E H IV +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 86 GFCCKEN----LNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
E L +V EY+ +L + +TE + + + L F H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW--KTTDDPVQTK-ILGTLGYLAPEYAE 198
IIHRD++P+NIL++ + DFG+AR + + QT ++GT YL+PE A
Sbjct: 137 ----IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR 192
Query: 199 NGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWA-EPLIEKLALHELIDPRI 257
V R+DVY+ G +L ++++G G+ P Q E I A HE +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEP--PFTGDSPVSVAYQHVREDPIPPSARHE----GL 246
Query: 258 ENSYDTYELYLMAKTAYLCVQRNPEGR 284
D L +AK NPE R
Sbjct: 247 SADLDAVVLKALAK--------NPENR 265
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KVRKEASTQGFA---EFQSEVYVLN 74
Q A DF LG+G FG+VY K + I A KV +A + + + EV + +
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIG 129
RH NI+ L G+ L+ EY +++ L FD QR A I
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--------QRTATYIT 116
Query: 130 T-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTKILG 187
A L + C +IHRD++P N+LL + DFG W + + G
Sbjct: 117 ELANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRDTLCG 169
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMN 228
TL YL PE E + + D+++ G++ + + G+ + N
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 121
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 118
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 119/289 (41%), Gaps = 49/289 (16%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 83 MLLGFCCKENLNILVYEYIC---NKSLHWHLFDNT------------ESVLEWHQRYAAA 127
LLG C K ++V C N S + N + L +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKI 185
AKG+ FL IHRD+ NILL+ V + DFGLAR +K D +
Sbjct: 157 FQVAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 186 LGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEP 242
L ++APE + + +I++DV++FG++L ++ S G P ++ ++
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 265
Query: 243 LIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
L E + Y T E+Y +T C P RP+ E+V
Sbjct: 266 LKEGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 304
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 119
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESV----LEWHQRYAAAIGTAKGLRF 136
IV LL EN LV+E++ S+ F + ++ L + Y + +GL F
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAF 121
Query: 137 LHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAP 194
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y AP
Sbjct: 122 ----CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAP 175
Query: 195 EYAEN-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
E S D+++ G I ++++ R + + E
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 120
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 121 CHSHRVLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 122
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 180
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 213
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 119/288 (41%), Gaps = 48/288 (16%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 83 MLLGFCCKENLNILVYEYIC----------NKSLHWHLFDNTESV----LEWHQRYAAAI 128
LLG C K ++V C +K + + E + L +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 129 GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKIL 186
AKG+ FL IHRD+ NILL+ V + DFGLAR K D +
Sbjct: 156 QVAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 187 GTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEPL 243
L ++APE + + +I++DV++FG++L ++ S G P ++ ++ L
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 264
Query: 244 IEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
E + Y T E+Y +T C P RP+ E+V
Sbjct: 265 KEGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 302
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 13/213 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
IV LL EN LV+E++ ++ L + + + + + +GL F
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---- 119
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAPEYAE 198
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y APE
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 199 N-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
S D+++ G I ++++ R + + E
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKN 80
+F K +GEG +G VYK K G+++A K+R + T+G E+ +L H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESV----LEWHQRYAAAIGTAKGLRF 136
IV LL EN LV+E++ S+ F + ++ L + Y + +GL F
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAF 120
Query: 137 LHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI--LGTLGYLAP 194
C ++HRD++P N+L+ + L DFGLAR PV+T + TL Y AP
Sbjct: 121 ----CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAP 174
Query: 195 EYAEN-GIVSIRTDVYAFGIILLQLMSGRKVVDMNGE 230
E S D+++ G I ++++ R + + E
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 120/289 (41%), Gaps = 49/289 (16%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 83 MLLGFCCKENLNILVYEYIC-------------NKSLHWHLF--DNTESVLEWHQRYAAA 127
LLG C K ++V C N+ + + + D + L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKI 185
AKG+ FL IHRD+ NILL+ V + DFGLAR K D +
Sbjct: 155 FQVAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 186 LGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEP 242
L ++APE + + +I++DV++FG++L ++ S G P ++ ++
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 263
Query: 243 LIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
L E + Y T E+Y +T C P RP+ E+V
Sbjct: 264 LKEGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 302
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 37/282 (13%)
Query: 20 QATGDFSKENLLGEGGFGH-VYKGELKDG-QMIAAKVR-KEASTQGFAEFQSEVYVLNFA 76
Q+ + + +GEG FG + +DG Q + ++ S++ E + EV VL
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM 80
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICN-----KSLHWH--LFDNTESVLEWHQRYAAAIG 129
+H NIV +EN ++ + C K ++ + + +L+W + A
Sbjct: 81 KHPNIVQYRE-SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA-- 137
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL 189
L+ +H+ I+HRD++ NI LT D LGDFG+AR + + +GT
Sbjct: 138 ----LKHVHDR----KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTP 189
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
YL+PE EN + ++D++A G +L +L + + + + L+ K+
Sbjct: 190 YYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS----------MKNLVLKIIS 239
Query: 250 HELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
+ SYD L +RNP RPS+ ++
Sbjct: 240 GSFPPVSLHYSYDLRSL------VSQLFKRNPRDRPSVNSIL 275
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 30 LLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQG---FAEFQSEVYVLNFARHKNIVMLL 85
+LG GG V+ +L+D + +A KV + + + F+ E H IV +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 86 GFCCKEN----LNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
E L +V EY+ +L + +TE + + + L F H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW--KTTDDPVQTK-ILGTLGYLAPEYAE 198
IIHRD++P+NI+++ + DFG+AR + + QT ++GT YL+PE A
Sbjct: 137 ----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 199 NGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWA-EPLIEKLALHELIDPRI 257
V R+DVY+ G +L ++++G G+ P Q E I A HE +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEP--PFTGDSPVSVAYQHVREDPIPPSARHE----GL 246
Query: 258 ENSYDTYELYLMAKTAYLCVQRNPEGR 284
D L +AK NPE R
Sbjct: 247 SADLDAVVLKALAK--------NPENR 265
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 120/289 (41%), Gaps = 49/289 (16%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 83 MLLGFCCKENLNILVYEYIC-------------NKSLHWHLF--DNTESVLEWHQRYAAA 127
LLG C K ++V C N+ + + + D + L +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKI 185
AKG+ FL IHRD+ NILL+ V + DFGLAR K D +
Sbjct: 146 FQVAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 186 LGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEP 242
L ++APE + + +I++DV++FG++L ++ S G P ++ ++
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 254
Query: 243 LIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
L E + Y T E+Y +T C P RP+ E+V
Sbjct: 255 LKEGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 293
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 120/282 (42%), Gaps = 32/282 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE-----FQSEVYVLNFARH 78
+ S + ++G G FG V G LK V + G+ E F E ++ H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSLHWHL--FDNTESVLEWHQRYAAAIGTAKGLRF 136
NI+ L G K ++V E + N SL L D +V+ Q G A G+++
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKY 133
Query: 137 LHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG---TLGYLA 193
L + +HRD+ NIL+ + V + DFGL+R D G + + +
Sbjct: 134 LSDMG----YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE + +DV+++GI+L ++MS GE P + + +I+ + +
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSN--QDVIKAVDEGYRL 240
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
P ++ Y+L L C Q++ RP ++V +L+
Sbjct: 241 PPPMDCPAALYQLMLD------CWQKDRNNRPKFEQIVSILD 276
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 24 DFSKENLLGEGGFGHVY--KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNI 81
DF LG GGFG V+ K ++ D ++R + EV L H I
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 82 VMLLGFCCKENL-------NILVYEYI----CNKSLHWHLFDNTESVLEWHQRYAAA--- 127
V ++N + VY YI C K + + N +E +R
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKE-NLKDWMNGRCTIEERERSVCLHIF 124
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI-- 185
+ A+ + FLH + ++HRD++PSNI T D V +GDFGL D+ QT +
Sbjct: 125 LQIAEAVEFLHSKG----LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 186 ----------LGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLM 219
+GT Y++PE S + D+++ G+IL +L+
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 28 ENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE-----FQSEVYVLNFARHKNIV 82
E ++G G G V G L+ V +A G+ E F SE ++ H NI+
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHL--FDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L G + L ++V EY+ N SL L D +++ Q G G+R+L +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM---QLVGMLRGVGAGMRYLSDL 170
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-DPVQTKILGTLG--YLAPEYA 197
+HRD+ N+L+ + V + DFGL+R D D T G + + APE
Sbjct: 171 G----YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAI 226
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
S +DV++FG+++ ++++
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 31/273 (11%)
Query: 25 FSKENLLGEGGFGHVYKG-ELKDGQMIAAKVRK-EASTQGFAEFQSEVYVLNFARHKNIV 82
F+K + +G+G FG VYKG + +++A K+ E + + Q E+ VL+ I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEE 140
G K ++ EY+ S L LE + Y A I KGL +LH E
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLE--ETYIATILREILKGLDYLHSE 135
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENG 200
+ IHRD++ +N+LL+ L DFG+A T + +GT ++APE +
Sbjct: 136 RK----IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 191
Query: 201 IVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENS 260
+ D+++ GI ++L GE P L P+ + + P +E
Sbjct: 192 AYDFKADIWSLGITAIEL--------AKGEPPNSDL----HPMRVLFLIPKNSPPTLEGQ 239
Query: 261 YD-TYELYLMAKTAYLCVQRNPEGRPSMGEVVR 292
+ ++ ++ A C+ ++P RP+ E+++
Sbjct: 240 HSKPFKEFVEA-----CLNKDPRFRPTAKELLK 267
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 15/224 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAK--VRKE--ASTQGFAEFQSEVYVLNFARHK 79
DF ++G G + V LK I A V+KE + Q+E +V A +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 80 NIVMLLGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQR-YAAAIGTAKGLRFL 137
++ L C + E+ V EY+ L +H+ + E H R Y+A I A L +L
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLA--LNYL 169
Query: 138 HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYA 197
HE RG II+RD++ N+LL + L D+G+ + + GT Y+APE
Sbjct: 170 HE--RG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL 225
Query: 198 ENGIVSIRTDVYAFGIILLQLMSGRKVVDMNG--EEPQQSLRQW 239
D +A G+++ ++M+GR D+ G + P Q+ +
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 269
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 23/212 (10%)
Query: 17 EIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFA 76
EI F KE LG G FG V G+ + +A K+ KE S EF E V+
Sbjct: 20 EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNL 76
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTA 131
H+ +V L G C K+ ++ EY+ N L +L + T+ +LE + A+
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT--- 188
+ +FL HRD+ N L+ V + DFGL+R+ D+ +T +G+
Sbjct: 137 ESKQFL----------HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--ETSSVGSKFP 184
Query: 189 LGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
+ + PE S ++D++AFG+++ ++ S
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 28 ENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE-----FQSEVYVLNFARHKNIV 82
E ++G G G V G L+ V +A G+ E F SE ++ H NI+
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHL--FDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L G + L ++V EY+ N SL L D +++ Q G G+R+L +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM---QLVGMLRGVGAGMRYLSDL 170
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-DPVQTKILGTLG--YLAPEYA 197
+HRD+ N+L+ + V + DFGL+R D D T G + + APE
Sbjct: 171 G----YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI 226
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
S +DV++FG+++ ++++
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 28 ENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE-----FQSEVYVLNFARHKNIV 82
E ++G G FG V G LK V + G+ E F E ++ H N+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHL--FDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L G + ++V E++ N +L L D +V+ Q G A G+R+L +
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI---QLVGMLRGIAAGMRYLADM 164
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLG--YLAPEY 196
+HRD+ NIL+ + V + DFGL+R DDP V T G + + APE
Sbjct: 165 G----YVHRDLAARNILVNSNLVCKVSDFGLSR-VIEDDPEAVYTTTGGKIPVRWTAPEA 219
Query: 197 AENGIVSIRTDVYAFGIILLQLMS--GRKVVDMNGEEPQQSLRQ---WAEPLIEKLALHE 251
+ + +DV+++GI++ ++MS R DM+ ++ +++ + P+ LH+
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQ 279
Query: 252 LI 253
L+
Sbjct: 280 LM 281
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 15/224 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAK--VRKE--ASTQGFAEFQSEVYVLNFARHK 79
DF ++G G + V LK I A V+KE + Q+E +V A +
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 80 NIVMLLGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQR-YAAAIGTAKGLRFL 137
++ L C + E+ V EY+ L +H+ + E H R Y+A I A L +L
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLA--LNYL 137
Query: 138 HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYA 197
HE RG II+RD++ N+LL + L D+G+ + + GT Y+APE
Sbjct: 138 HE--RG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 193
Query: 198 ENGIVSIRTDVYAFGIILLQLMSGRKVVDMNG--EEPQQSLRQW 239
D +A G+++ ++M+GR D+ G + P Q+ +
Sbjct: 194 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 237
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 15/224 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAK--VRKE--ASTQGFAEFQSEVYVLNFARHK 79
DF ++G G + V LK I A V+KE + Q+E +V A +
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 80 NIVMLLGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQR-YAAAIGTAKGLRFL 137
++ L C + E+ V EY+ L +H+ + E H R Y+A I A L +L
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLA--LNYL 126
Query: 138 HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYA 197
HE RG II+RD++ N+LL + L D+G+ + + GT Y+APE
Sbjct: 127 HE--RG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 182
Query: 198 ENGIVSIRTDVYAFGIILLQLMSGRKVVDMNG--EEPQQSLRQW 239
D +A G+++ ++M+GR D+ G + P Q+ +
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 226
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 15/224 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAK--VRKE--ASTQGFAEFQSEVYVLNFARHK 79
DF ++G G + V LK I A V+KE + Q+E +V A +
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 80 NIVMLLGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQR-YAAAIGTAKGLRFL 137
++ L C + E+ V EY+ L +H+ + E H R Y+A I A L +L
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLA--LNYL 122
Query: 138 HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYA 197
HE RG II+RD++ N+LL + L D+G+ + + GT Y+APE
Sbjct: 123 HE--RG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 178
Query: 198 ENGIVSIRTDVYAFGIILLQLMSGRKVVDMNG--EEPQQSLRQW 239
D +A G+++ ++M+GR D+ G + P Q+ +
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 222
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 117/268 (43%), Gaps = 28/268 (10%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G G FG V+ G + +A K +E + +F E V+ H +V L G C +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
+ LV E++ + L +L + + +G+ +L E C +IHRD
Sbjct: 75 QAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC----VIHRD 129
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+ N L+ + V + DFG+ R+ D T GT + + +PE S ++D
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL-HELIDPRIENSYDTYEL 266
V++FG+++ ++ S K+ N + ++E ++ L PR+ +++
Sbjct: 188 VWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH----- 233
Query: 267 YLMAKTAYLCVQRNPEGRPSMGEVVRLL 294
+ + C + PE RP+ ++R L
Sbjct: 234 --VYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 41/258 (15%)
Query: 31 LGEGGFGHVYKGE-LKDGQMIA-AKVRKEASTQGFA-EFQSEVYVLNFARHKNIVMLLGF 87
+G+G FG V+K K GQ +A KV E +GF E+ +L +H+N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 88 C---------CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
C CK ++ LV+++ C L L N + GL ++H
Sbjct: 86 CRTKASPYNRCKASI-YLVFDF-CEHDLA-GLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR----WKTTDDPVQTKILGTLGYLAP 194
I+HRDM+ +N+L+T D V L DFGLAR K + + TL Y P
Sbjct: 143 R----NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 195 EYAENGIVSIR-----TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
E ++ R D++ G I+ ++ + ++ N E+ Q + LI +L
Sbjct: 199 EL----LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA-------LISQLCG 247
Query: 250 HELIDPRIENSYDTYELY 267
I P + + D YELY
Sbjct: 248 S--ITPEVWPNVDNYELY 263
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 24 DFSKENLLGEGGFGHV-YKGELKDGQMIAAKV-RKEA--STQGFAEFQSEVYVLNFARHK 79
DF LLG+G FG V E G+ A K+ RKE + A +E VL RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 80 NIVML-LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
+ L F + L V EY L +HL E + Y A I +A L +LH
Sbjct: 66 FLTALKYAFQTHDRL-CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEYLH 122
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
+++RD++ N++L D + DFGL + +D GT YLAPE E
Sbjct: 123 SR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 199 NGIVSIRTDVYAFGIILLQLMSGR 222
+ D + G+++ ++M GR
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 24 DFSKENLLGEGGFGHV-YKGELKDGQMIAAKV-RKEA--STQGFAEFQSEVYVLNFARHK 79
DF LLG+G FG V E G+ A K+ RKE + A +E VL RH
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 80 NIVML-LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
+ L F + L V EY L +HL E + Y A I +A L +LH
Sbjct: 69 FLTALKYAFQTHDRL-CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEYLH 125
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
+++RD++ N++L D + DFGL + +D GT YLAPE E
Sbjct: 126 SR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 181
Query: 199 NGIVSIRTDVYAFGIILLQLMSGR 222
+ D + G+++ ++M GR
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 24 DFSKENLLGEGGFGHV-YKGELKDGQMIAAKV-RKEA--STQGFAEFQSEVYVLNFARHK 79
DF LLG+G FG V E G+ A K+ RKE + A +E VL RH
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 80 NIVML-LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
+ L F + L V EY L +HL E + Y A I +A L +LH
Sbjct: 71 FLTALKYAFQTHDRL-CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEYLH 127
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
+++RD++ N++L D + DFGL + +D GT YLAPE E
Sbjct: 128 SR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 183
Query: 199 NGIVSIRTDVYAFGIILLQLMSGR 222
+ D + G+++ ++M GR
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 24 DFSKENLLGEGGFGHV-YKGELKDGQMIAAKV-RKEA--STQGFAEFQSEVYVLNFARHK 79
DF LLG+G FG V E G+ A K+ RKE + A +E VL RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 80 NIVML-LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
+ L F + L V EY L +HL E + Y A I +A L +LH
Sbjct: 66 FLTALKYAFQTHDRL-CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEYLH 122
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
+++RD++ N++L D + DFGL + +D GT YLAPE E
Sbjct: 123 SR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 199 NGIVSIRTDVYAFGIILLQLMSGR 222
+ D + G+++ ++M GR
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 23 GDFSKENLLGEGGFG------HVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFA 76
G++ LGEG FG H G+ ++I KV ++ QG + E+ L
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLL 61
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRF 136
RH +I+ L ++ I+V EY N+ + + + S E + + I
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV----- 116
Query: 137 LHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEY 196
E C I+HRD++P N+LL + DFGL+ T + ++T G+ Y APE
Sbjct: 117 --EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEV 173
Query: 197 AENGIVS-IRTDVYAFGIILLQLMSGR 222
+ + DV++ G+IL ++ R
Sbjct: 174 ISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 23 GDFSKENLLGEGGFG------HVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFA 76
G++ LGEG FG H G+ ++I KV ++ QG + E+ L
Sbjct: 14 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLL 71
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRF 136
RH +I+ L ++ I+V EY N+ + + + S E + + I
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV----- 126
Query: 137 LHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEY 196
E C I+HRD++P N+LL + DFGL+ T + ++T G+ Y APE
Sbjct: 127 --EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEV 183
Query: 197 AENGIVS-IRTDVYAFGIILLQLMSGR 222
+ + DV++ G+IL ++ R
Sbjct: 184 ISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 24 DFSKENLLGEGGFGHV-YKGELKDGQMIAAKV-RKEA--STQGFAEFQSEVYVLNFARHK 79
DF LLG+G FG V E G+ A K+ RKE + A +E VL RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 80 NIVML-LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
+ L F + L V EY L +HL E + Y A I +A L +LH
Sbjct: 66 FLTALKYAFQTHDRL-CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEYLH 122
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
+++RD++ N++L D + DFGL + +D GT YLAPE E
Sbjct: 123 SR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 199 NGIVSIRTDVYAFGIILLQLMSGR 222
+ D + G+++ ++M GR
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 24 DFSKENLLGEGGFGHV-YKGELKDGQMIAAKV-RKEA--STQGFAEFQSEVYVLNFARHK 79
DF LLG+G FG V E G+ A K+ RKE + A +E VL RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 80 NIVML-LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
+ L F + L V EY L +HL E + Y A I +A L +LH
Sbjct: 66 FLTALKYAFQTHDRL-CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEYLH 122
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
+++RD++ N++L D + DFGL + +D GT YLAPE E
Sbjct: 123 SR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 199 NGIVSIRTDVYAFGIILLQLMSGR 222
+ D + G+++ ++M GR
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 23 GDFSKENLLGEGGFG------HVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFA 76
G++ LGEG FG H G+ ++I KV ++ QG + E+ L
Sbjct: 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLL 70
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRF 136
RH +I+ L ++ I+V EY N+ + + + S E + + I
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV----- 125
Query: 137 LHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEY 196
E C I+HRD++P N+LL + DFGL+ T + ++T G+ Y APE
Sbjct: 126 --EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEV 182
Query: 197 AENGIVS-IRTDVYAFGIILLQLMSGR 222
+ + DV++ G+IL ++ R
Sbjct: 183 ISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 26/217 (11%)
Query: 16 SEIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KV--RKEASTQGFA-EFQSEVY 71
S+ Q DF LG+G FG+VY + + I A KV + + G + + EV
Sbjct: 5 SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 72 VLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAA 126
+ + RH NI+ L G+ L+ EY +++ L FD QR A
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE--------QRTAT 116
Query: 127 AIGT-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTK 184
I A L + C +IHRD++P N+LL + + DFG W +T
Sbjct: 117 YITELANALSY----CHSKRVIHRDIKPENLLLGSNGELKIADFG---WSVHAPSSRRTT 169
Query: 185 ILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+ GTL YL PE E + + D+++ G++ + + G
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 24 DFSKENLLGEGGFGHV-YKGELKDGQMIAAKV-RKEA--STQGFAEFQSEVYVLNFARHK 79
DF LLG+G FG V E G+ A K+ RKE + A +E VL RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 80 NIVML-LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
+ L F + L V EY L +HL E + Y A I +A L +LH
Sbjct: 66 FLTALKYAFQTHDRL-CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEYLH 122
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
+++RD++ N++L D + DFGL + +D GT YLAPE E
Sbjct: 123 SR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 199 NGIVSIRTDVYAFGIILLQLMSGR 222
+ D + G+++ ++M GR
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 23 GDFSKENLLGEGGFG------HVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFA 76
G++ LGEG FG H G+ ++I KV ++ QG + E+ L
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLL 65
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRF 136
RH +I+ L ++ I+V EY N+ + + + S E + + I
Sbjct: 66 RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV----- 120
Query: 137 LHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEY 196
E C I+HRD++P N+LL + DFGL+ T + ++T G+ Y APE
Sbjct: 121 --EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEV 177
Query: 197 AENGIVS-IRTDVYAFGIILLQLMSGR 222
+ + DV++ G+IL ++ R
Sbjct: 178 ISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 41/258 (15%)
Query: 31 LGEGGFGHVYKGE-LKDGQMIA-AKVRKEASTQGFA-EFQSEVYVLNFARHKNIVMLLGF 87
+G+G FG V+K K GQ +A KV E +GF E+ +L +H+N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 88 C---------CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
C CK ++ LV+++ C L L N + GL ++H
Sbjct: 86 CRTKASPYNRCKGSI-YLVFDF-CEHDLA-GLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR----WKTTDDPVQTKILGTLGYLAP 194
I+HRDM+ +N+L+T D V L DFGLAR K + + TL Y P
Sbjct: 143 R----NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 195 EYAENGIVSIR-----TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
E ++ R D++ G I+ ++ + ++ N E+ Q + LI +L
Sbjct: 199 EL----LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA-------LISQLCG 247
Query: 250 HELIDPRIENSYDTYELY 267
I P + + D YELY
Sbjct: 248 S--ITPEVWPNVDNYELY 263
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 17 EIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFA 76
EI F KE LG G FG V G+ + +A K+ KE S EF E V+
Sbjct: 4 EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNL 60
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTA 131
H+ +V L G C K+ ++ EY+ N L +L + T+ +LE + A+
Sbjct: 61 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 120
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT--- 188
+ +FL HRD+ N L+ V + DFGL+R+ D+ T +G+
Sbjct: 121 ESKQFL----------HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFP 168
Query: 189 LGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
+ + PE S ++D++AFG+++ ++ S
Sbjct: 169 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 41/258 (15%)
Query: 31 LGEGGFGHVYKGE-LKDGQMIA-AKVRKEASTQGFA-EFQSEVYVLNFARHKNIVMLLGF 87
+G+G FG V+K K GQ +A KV E +GF E+ +L +H+N+V L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 88 C---------CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
C CK ++ LV+++ C L L N + GL ++H
Sbjct: 85 CRTKASPYNRCKGSI-YLVFDF-CEHDLA-GLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 141
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR----WKTTDDPVQTKILGTLGYLAP 194
I+HRDM+ +N+L+T D V L DFGLAR K + + TL Y P
Sbjct: 142 R----NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 195 EYAENGIVSIR-----TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
E ++ R D++ G I+ ++ + ++ N E+ Q + LI +L
Sbjct: 198 EL----LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA-------LISQLCG 246
Query: 250 HELIDPRIENSYDTYELY 267
I P + + D YELY
Sbjct: 247 S--ITPEVWPNVDNYELY 262
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 17 EIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFA 76
EI F KE LG G FG V G+ + +A K+ KE S EF E V+
Sbjct: 20 EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNL 76
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTA 131
H+ +V L G C K+ ++ EY+ N L +L + T+ +LE + A+
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT--- 188
+ +FL HRD+ N L+ V + DFGL+R+ D+ T +G+
Sbjct: 137 ESKQFL----------HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFP 184
Query: 189 LGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
+ + PE S ++D++AFG+++ ++ S
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 41/258 (15%)
Query: 31 LGEGGFGHVYKGE-LKDGQMIA-AKVRKEASTQGFA-EFQSEVYVLNFARHKNIVMLLGF 87
+G+G FG V+K K GQ +A KV E +GF E+ +L +H+N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 88 C---------CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
C CK ++ LV+++ C L L N + GL ++H
Sbjct: 86 CRTKASPYNRCKGSI-YLVFDF-CEHDLA-GLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR----WKTTDDPVQTKILGTLGYLAP 194
I+HRDM+ +N+L+T D V L DFGLAR K + + TL Y P
Sbjct: 143 R----NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 195 EYAENGIVSIR-----TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
E ++ R D++ G I+ ++ + ++ N E+ Q + LI +L
Sbjct: 199 EL----LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA-------LISQLCG 247
Query: 250 HELIDPRIENSYDTYELY 267
I P + + D YELY
Sbjct: 248 S--ITPEVWPNVDNYELY 263
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 17/224 (7%)
Query: 21 ATGDFSKENLLGEGGFGHVYKG-ELKDGQMIAAK-VRKEASTQGFA-EFQSEVYVLNFAR 77
AT + +G G +G VYK + G +A K VR +G EV +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 78 ---HKNIVMLLGFCCKENLN-----ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIG 129
H N+V L+ C + LV+E++ ++ L +L L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL 189
+GL FLH C I+HRD++P NIL+T L DFGLAR + + ++ TL
Sbjct: 121 FLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL-APVVVTL 175
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQ 233
Y APE + D+++ G I ++ + + N E Q
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 219
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 130/298 (43%), Gaps = 60/298 (20%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAKVRKEA---STQGFAEFQSEVYVLNFARHKNIVMLLG 86
LG+G +G V+K + + G+++A K +A ST F+ + + + H+NIV LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 87 FCCKENLN--ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
+N LV++Y+ LH + N +LE + K +++LH G
Sbjct: 77 VLRADNDRDVYLVFDYM-ETDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLH----SG 128
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTT---------------------DDPVQT 183
++HRDM+PSNILL + + DFGL+R D P+ T
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 184 KILGTLGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRK----------------VVD 226
+ T Y APE + D+++ G IL +++ G+ V+D
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVID 248
Query: 227 MNGEEPQQSLRQ-WAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEG 283
E +S++ +A+ +IE +L E ++ R N D + K L ++ NP+
Sbjct: 249 FPSNEDVESIQSPFAKTMIE--SLKEKVEIRQSNKRDIF-----TKWKNLLLKINPKA 299
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 17 EIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFA 76
EI F KE LG G FG V G+ + +A K+ KE S EF E V+
Sbjct: 5 EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNL 61
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTA 131
H+ +V L G C K+ ++ EY+ N L +L + T+ +LE + A+
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT--- 188
+ +FL HRD+ N L+ V + DFGL+R+ D+ T +G+
Sbjct: 122 ESKQFL----------HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFP 169
Query: 189 LGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
+ + PE S ++D++AFG+++ ++ S
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAA--KVRKEASTQGFA-EFQSEVYVLNFAR---HKNIVM 83
+GEG +G V+K +LK+G A +VR + +G EV VL H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 84 LLGFCC-----KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
L C +E LV+E++ ++ L +L E + +GL FLH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
++HRD++P NIL+T L DFGLAR + + T ++ TL Y APE
Sbjct: 138 SH----RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL-TSVVVTLWYRAPEVLL 192
Query: 199 NGIVSIRTDVYAFGIILLQL 218
+ D+++ G I ++
Sbjct: 193 QSSYATPVDLWSVGCIFAEM 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAA--KVRKEASTQGFA-EFQSEVYVLNFAR---HKNIVM 83
+GEG +G V+K +LK+G A +VR + +G EV VL H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 84 LLGFCC-----KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
L C +E LV+E++ ++ L +L E + +GL FLH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
++HRD++P NIL+T L DFGLAR + + T ++ TL Y APE
Sbjct: 138 SH----RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL-TSVVVTLWYRAPEVLL 192
Query: 199 NGIVSIRTDVYAFGIILLQL 218
+ D+++ G I ++
Sbjct: 193 QSSYATPVDLWSVGCIFAEM 212
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 17 EIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFA 76
EI F KE LG G FG V G+ + +A K+ KE S EF E V+
Sbjct: 11 EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNL 67
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTA 131
H+ +V L G C K+ ++ EY+ N L +L + T+ +LE + A+
Sbjct: 68 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 127
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT--- 188
+ +FL HRD+ N L+ V + DFGL+R+ D+ T +G+
Sbjct: 128 ESKQFL----------HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFP 175
Query: 189 LGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
+ + PE S ++D++AFG+++ ++ S
Sbjct: 176 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 21/198 (10%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
LG G FG V G+ + +A K+ KE S EF E V+ H+ +V L G C K
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 91 ENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLHEECRGGP 145
+ ++ EY+ N L +L + T+ +LE + A+ + +FL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL-------- 122
Query: 146 IIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIV 202
HRD+ N L+ V + DFGL+R+ D+ T +G+ + + PE
Sbjct: 123 --HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 203 SIRTDVYAFGIILLQLMS 220
S ++D++AFG+++ ++ S
Sbjct: 179 SSKSDIWAFGVLMWEIYS 196
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 17 EIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFA 76
EI F KE LG G FG V G+ + +A K+ KE S EF E V+
Sbjct: 5 EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNL 61
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTA 131
H+ +V L G C K+ ++ EY+ N L +L + T+ +LE + A+
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT--- 188
+ +FL HRD+ N L+ V + DFGL+R+ D+ ++ G+
Sbjct: 122 ESKQFL----------HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSR--GSKFP 169
Query: 189 LGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
+ + PE S ++D++AFG+++ ++ S
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 24/226 (10%)
Query: 12 KFSFSEIQQATGDFSKENLLGEGGFGHVYKGE-LKDGQMIAAKVRKEASTQGFAEFQSEV 70
+ S ++ G F L+G G +G VYKG +K GQ+ A KV + + E + E+
Sbjct: 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM-DVTGDEEEEIKQEI 71
Query: 71 YVLN-FARHKNIVMLLGFCCKENLN------ILVYEYICNKSLHWHLFDNTESVL---EW 120
+L ++ H+NI G K+N LV E+ C L NT+ EW
Sbjct: 72 NMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF-CGAGSVTDLIKNTKGNTLKEEW 130
Query: 121 HQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP 180
I +GL LH+ +IHRD++ N+LLT + L DFG++
Sbjct: 131 IAYICREI--LRGLSHLHQH----KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 184
Query: 181 VQTKILGTLGYLAPEYA-----ENGIVSIRTDVYAFGIILLQLMSG 221
+ +GT ++APE + ++D+++ GI +++ G
Sbjct: 185 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAA--KVRKEASTQGFA-EFQSEVYVLNFAR---HKNIVM 83
+GEG +G V+K +LK+G A +VR + +G EV VL H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 84 LLGFCC-----KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
L C +E LV+E++ ++ L +L E + +GL FLH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
++HRD++P NIL+T L DFGLAR + + T ++ TL Y APE
Sbjct: 138 SH----RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL-TSVVVTLWYRAPEVLL 192
Query: 199 NGIVSIRTDVYAFGIILLQL 218
+ D+++ G I ++
Sbjct: 193 QSSYATPVDLWSVGCIFAEM 212
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 124/290 (42%), Gaps = 31/290 (10%)
Query: 10 PMKFSFSEIQQATGD----FSKENLLGEGGFGHVYKG-ELKDGQMIAAKVRK-EASTQGF 63
P++ +Q D F+K +G+G FG V+KG + + +++A K+ E +
Sbjct: 5 PVQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI 64
Query: 64 AEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTES-VLEWHQ 122
+ Q E+ VL+ + G K+ ++ EY+ S D E L+ Q
Sbjct: 65 EDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQ 120
Query: 123 RYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQ 182
KGL +LH E + IHRD++ +N+LL+ L DFG+A T +
Sbjct: 121 IATILREILKGLDYLHSEKK----IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176
Query: 183 TKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEP 242
+GT ++APE + + D+++ GI ++L GE P L P
Sbjct: 177 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL--------ARGEPPHSELH----P 224
Query: 243 LIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVR 292
+ + + P +E +Y + + C+ + P RP+ E+++
Sbjct: 225 MKVLFLIPKNNPPTLEGNYSKP----LKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 27/271 (9%)
Query: 25 FSKENLLGEGGFGHVYKG-ELKDGQMIAAKVRK-EASTQGFAEFQSEVYVLNFARHKNIV 82
F+K +G+G FG V+KG + + +++A K+ E + + Q E+ VL+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTES-VLEWHQRYAAAIGTAKGLRFLHEEC 141
G K+ ++ EY+ S D E L+ Q KGL +LH E
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
+ IHRD++ +N+LL+ L DFG+A T + +GT ++APE +
Sbjct: 125 K----IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA 180
Query: 202 VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSY 261
+ D+++ GI ++L GE P L P+ + + P +E +Y
Sbjct: 181 YDSKADIWSLGITAIEL--------ARGEPPHSELH----PMKVLFLIPKNNPPTLEGNY 228
Query: 262 DTYELYLMAKTAYLCVQRNPEGRPSMGEVVR 292
+ + C+ + P RP+ E+++
Sbjct: 229 SKP----LKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 26/267 (9%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G G FG V+ G + +A K +E + +F E V+ H +V L G C +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 91 ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRD 150
+ LV+E++ + L +L + + +G+ +L E +IHRD
Sbjct: 74 QAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE----ASVIHRD 128
Query: 151 MRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT---LGYLAPEYAENGIVSIRTD 207
+ N L+ + V + DFG+ R+ D T GT + + +PE S ++D
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 208 VYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELY 267
V++FG+++ ++ S K+ N R +E + + L PR+ +++
Sbjct: 187 VWSFGVLMWEVFSEGKIPYEN--------RSNSEVVEDISTGFRLYKPRLASTH------ 232
Query: 268 LMAKTAYLCVQRNPEGRPSMGEVVRLL 294
+ + C + PE RP+ ++R L
Sbjct: 233 -VYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 27/271 (9%)
Query: 25 FSKENLLGEGGFGHVYKG-ELKDGQMIAAKVRK-EASTQGFAEFQSEVYVLNFARHKNIV 82
F+K +G+G FG V+KG + + +++A K+ E + + Q E+ VL+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTES-VLEWHQRYAAAIGTAKGLRFLHEEC 141
G K+ ++ EY+ S D E L+ Q KGL +LH E
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
+ IHRD++ +N+LL+ L DFG+A T + +GT ++APE +
Sbjct: 125 K----IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA 180
Query: 202 VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSY 261
+ D+++ GI ++L GE P L P+ + + P +E +Y
Sbjct: 181 YDSKADIWSLGITAIEL--------ARGEPPHSELH----PMKVLFLIPKNNPPTLEGNY 228
Query: 262 DTYELYLMAKTAYLCVQRNPEGRPSMGEVVR 292
+ + C+ + P RP+ E+++
Sbjct: 229 SKP----LKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 17/224 (7%)
Query: 21 ATGDFSKENLLGEGGFGHVYKG-ELKDGQMIAAK-VRKEASTQGFA-EFQSEVYVLNFAR 77
AT + +G G +G VYK + G +A K VR +G EV +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 78 ---HKNIVMLLGFCCKENLN-----ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIG 129
H N+V L+ C + LV+E++ ++ L +L L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL 189
+GL FLH C I+HRD++P NIL+T L DFGLAR + + ++ TL
Sbjct: 121 FLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL-FPVVVTL 175
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQ 233
Y APE + D+++ G I ++ + + N E Q
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 219
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 30/246 (12%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAA-KV--RKEASTQGFA-EFQSEVYVLNFARHK 79
DF LG+G FG+VY K I A KV + + +G + + E+ + H
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 80 NIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGT-AKGLRFLH 138
NI+ L + L+ EY L+ L +S QR A + A L +
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKEL---QKSCTFDEQRTATIMEELADALMY-- 138
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL-GTLGYLAPEYA 197
C G +IHRD++P N+LL + DFG W ++ K + GTL YL PE
Sbjct: 139 --CHGKKVIHRDIKPENLLLGLKGELKIADFG---WSVHAPSLRRKTMCGTLDYLPPEMI 193
Query: 198 ENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMNGEEPQQSLRQWAEPLI 244
E + + + D++ G++ +L+ G R++V ++ + P S+ A+ LI
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFP-ASVPTGAQDLI 252
Query: 245 EKLALH 250
KL H
Sbjct: 253 SKLLRH 258
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 38/293 (12%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG+++L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 152
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAPEYA 197
+HRD+ N +L F + DFGLAR + + + K+ + ++A E
Sbjct: 153 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESL 209
Query: 198 ENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRI 257
+ + ++DV++FG++L +LM+ G P + + + + L L+ P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT-------RGAPPYPDVNTF-DITVYLLQGRRLLQPE- 260
Query: 258 ENSYDTYELY-LMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDRFHHLGEKFV 309
Y LY +M K C E RPS E+V + F +GE +V
Sbjct: 261 ---YCPDPLYEVMLK----CWHPKAEMRPSFSELVSRISAIFSTF--IGEHYV 304
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 38/293 (12%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG+++L +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 151
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAPEYA 197
+HRD+ N +L F + DFGLAR + + + K+ + ++A E
Sbjct: 152 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESL 208
Query: 198 ENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRI 257
+ + ++DV++FG++L +LM+ G P + + + + L L+ P
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT-------RGAPPYPDVNTF-DITVYLLQGRRLLQPE- 259
Query: 258 ENSYDTYELY-LMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDRFHHLGEKFV 309
Y LY +M K C E RPS E+V + F +GE +V
Sbjct: 260 ---YCPDPLYEVMLK----CWHPKAEMRPSFSELVSRISAIFSTF--IGEHYV 303
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 8/192 (4%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCC 89
+G+G G VY ++ GQ +A + +E+ V+ ++ NIV L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 90 KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHR 149
+ +V EY+ SL + TE+ ++ Q A + L FLH +IHR
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLH----SNQVIHR 140
Query: 150 DMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDVY 209
D++ NILL D L DFG T + +++++GT ++APE + D++
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 210 AFGIILLQLMSG 221
+ GI+ ++++ G
Sbjct: 201 SLGIMAIEMIEG 212
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 27/271 (9%)
Query: 25 FSKENLLGEGGFGHVYKG-ELKDGQMIAAKVRK-EASTQGFAEFQSEVYVLNFARHKNIV 82
F+K +G+G FG V+KG + + +++A K+ E + + Q E+ VL+ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTES-VLEWHQRYAAAIGTAKGLRFLHEEC 141
G K+ ++ EY+ S D E L+ Q KGL +LH E
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
+ IHRD++ +N+LL+ L DFG+A T + +GT ++APE +
Sbjct: 145 K----IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA 200
Query: 202 VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSY 261
+ D+++ GI ++L GE P L P+ + + P +E +Y
Sbjct: 201 YDSKADIWSLGITAIEL--------ARGEPPHSELH----PMKVLFLIPKNNPPTLEGNY 248
Query: 262 DTYELYLMAKTAYLCVQRNPEGRPSMGEVVR 292
+ + C+ + P RP+ E+++
Sbjct: 249 SKP----LKEFVEACLNKEPSFRPTAKELLK 275
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 32/267 (11%)
Query: 30 LLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQG---FAEFQSEVYVLNFARHKNIVMLL 85
+LG GG V+ +L+ + +A KV + + + F+ E H IV +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 86 GFCCKEN----LNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
E L +V EY+ +L + +TE + + + L F H+
Sbjct: 79 ATGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW--KTTDDPVQTK-ILGTLGYLAPEYAE 198
IIHRD++P+NI+++ + DFG+AR + + QT ++GT YL+PE A
Sbjct: 137 ----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 199 NGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWA-EPLIEKLALHELIDPRI 257
V R+DVY+ G +L ++++G G+ P Q E I A HE +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEP--PFTGDSPVSVAYQHVREDPIPPSARHE----GL 246
Query: 258 ENSYDTYELYLMAKTAYLCVQRNPEGR 284
D L +AK NPE R
Sbjct: 247 SADLDAVVLKALAK--------NPENR 265
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 30 LLGEGGFGHVYKG-ELKDGQMIAAK---VRKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
++G+G F V + + GQ A K V K S+ G + + + E + + +H +IV
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEEC 141
LL + + +V+E++ L + + ++ + + A+ + LR+ H+
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD-- 148
Query: 142 RGGPIIHRDMRPSNILLT--HDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
IIHRD++P N+LL + P+ LGDFG+A V +GT ++APE +
Sbjct: 149 --NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 206
Query: 199 NGIVSIRTDVYAFGIILLQLMSG 221
DV+ G+IL L+SG
Sbjct: 207 REPYGKPVDVWGCGVILFILLSG 229
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 107/230 (46%), Gaps = 27/230 (11%)
Query: 5 LYMKDPMKFSFSEIQQATGDFSK----ENLLGEGGFGHVYKGELK-DGQMIAAKVRKEAS 59
LY + P F +Q +T FS + +LG+G FG V + K GQ A KV +
Sbjct: 14 LYFQGPGMF----VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 69
Query: 60 TQGFAEFQS---EVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTES 116
+ + +S EV +L H NI+ L F + LV E LFD S
Sbjct: 70 VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG----ELFDEIIS 125
Query: 117 VLEWHQRYAAAI--GTAKGLRFLHEECRGGPIIHRDMRPSNILL---THDFVPMLGDFGL 171
+ + AA I G+ ++H+ I+HRD++P N+LL + D + DFGL
Sbjct: 126 RKRFSEVDAARIIRQVLSGITYMHK----NKIVHRDLKPENLLLESKSKDANIRIIDFGL 181
Query: 172 ARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+ ++ KI GT Y+APE +G + DV++ G+IL L+SG
Sbjct: 182 STHFEASKKMKDKI-GTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 229
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 9/194 (4%)
Query: 31 LGEGGFGHVYKGELKDGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKNIVMLLGFC 88
+GEG +G VYK + G+ A K+R E +G E+ +L +H NIV L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIH 148
+ +LV+E++ ++ L L D E LE + + G+ + H+ ++H
Sbjct: 70 HTKKRLVLVFEHL-DQDLK-KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR----RVLH 123
Query: 149 RDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEY-AENGIVSIRTD 207
RD++P N+L+ + + DFGLAR T + TL Y AP+ + S D
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTID 183
Query: 208 VYAFGIILLQLMSG 221
+++ G I ++++G
Sbjct: 184 IWSVGCIFAEMVNG 197
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG+++L +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 151
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILGTL--GYLAPEYAEN 199
+HRD+ N +L F + DFGLAR + V K L ++A E +
Sbjct: 152 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 200 GIVSIRTDVYAFGIILLQLMS 220
+ ++DV++FG++L +LM+
Sbjct: 211 QKFTTKSDVWSFGVLLWELMT 231
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 8/192 (4%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCC 89
+G+G G VY ++ GQ +A + +E+ V+ ++ NIV L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 90 KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHR 149
+ +V EY+ SL + TE+ ++ Q A + L FLH +IHR
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLH----SNQVIHR 140
Query: 150 DMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDVY 209
D++ NILL D L DFG T + ++ ++GT ++APE + D++
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 210 AFGIILLQLMSG 221
+ GI+ ++++ G
Sbjct: 201 SLGIMAIEMIEG 212
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAKV--RKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
LG+G F V + ++ GQ AAK+ K+ S + + + E + +H NIV L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPII 147
+E + LV++ + L F++ + E++ A+ + L ++ C I+
Sbjct: 72 ISEEGFHYLVFDLVTGGEL----FEDIVA-REYYSEADASHCIQQILESVNH-CHLNGIV 125
Query: 148 HRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
HRD++P N+LL + L DFGLA D GT GYL+PE
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK 185
Query: 205 RTDVYAFGIILLQLMSG 221
D++A G+IL L+ G
Sbjct: 186 PVDMWACGVILYILLVG 202
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 8/192 (4%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCC 89
+G+G G VY ++ GQ +A + +E+ V+ ++ NIV L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 90 KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHR 149
+ +V EY+ SL + TE+ ++ Q A + L FLH +IHR
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLH----SNQVIHR 141
Query: 150 DMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDVY 209
D++ NILL D L DFG T + ++ ++GT ++APE + D++
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 210 AFGIILLQLMSG 221
+ GI+ ++++ G
Sbjct: 202 SLGIMAIEMIEG 213
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAKV--RKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
LG+G F V + ++ GQ AAK+ K+ S + + + E + +H NIV L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPII 147
+E + LV++ + LF++ + E++ A+ + L ++ C I+
Sbjct: 72 ISEEGFHYLVFDLVTGG----ELFEDIVA-REYYSEADASHCIQQILESVNH-CHLNGIV 125
Query: 148 HRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
HRD++P N+LL + L DFGLA D GT GYL+PE
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK 185
Query: 205 RTDVYAFGIILLQLMSG 221
D++A G+IL L+ G
Sbjct: 186 PVDMWACGVILYILLVG 202
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 8/192 (4%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCC 89
+G+G G VY ++ GQ +A + +E+ V+ ++ NIV L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 90 KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHR 149
+ +V EY+ SL + TE+ ++ Q A + L FLH +IHR
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLH----SNQVIHR 140
Query: 150 DMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDVY 209
D++ NILL D L DFG T + ++ ++GT ++APE + D++
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 210 AFGIILLQLMSG 221
+ GI+ ++++ G
Sbjct: 201 SLGIMAIEMIEG 212
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 26/217 (11%)
Query: 16 SEIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-KV--RKEASTQGFA-EFQSEVY 71
S+ Q DF LG+G FG+VY + + I A KV + + G + + EV
Sbjct: 5 SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 72 VLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAA 126
+ + RH NI+ L G+ L+ EY +++ L FD QR A
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE--------QRTAT 116
Query: 127 AIGT-AKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT-TDDPVQTK 184
I A L + C +IHRD++P N+LL + + DFG W +
Sbjct: 117 YITELANALSY----CHSKRVIHRDIKPENLLLGSNGELKIADFG---WSVHAPSSRRDT 169
Query: 185 ILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+ GTL YL PE E + + D+++ G++ + + G
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 31 LGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCC 89
LG+G FG VYK + K+ G + AAKV + S + ++ E+ +L H IV LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 90 KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHR 149
+ ++ E+ ++ + + + E Q + L FLH + IIHR
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTE-PQIQVVCRQMLEALNFLHSK----RIIHR 141
Query: 150 DMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYA-----ENGIVSI 204
D++ N+L+T + L DFG++ + +GT ++APE ++
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 201
Query: 205 RTDVYAFGIILLQL 218
+ D+++ GI L+++
Sbjct: 202 KADIWSLGITLIEM 215
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 93/227 (40%), Gaps = 20/227 (8%)
Query: 21 ATGDFSKENLLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFA--- 76
AT + +G G +G VYK + G +A K + + G V A
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 77 -----RHKNIVMLLGFCCKENLN-----ILVYEYICNKSLHWHLFDNTESVLEWHQRYAA 126
H N+V L+ C + LV+E++ ++ L +L L
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 127 AIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+GL FLH C I+HRD++P NIL+T L DFGLAR + + T ++
Sbjct: 126 MRQFLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL-TPVV 180
Query: 187 GTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQ 233
TL Y APE + D+++ G I ++ + + N E Q
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 227
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 9/194 (4%)
Query: 31 LGEGGFGHVYKGELKDGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKNIVMLLGFC 88
+GEG +G VYK + G+ A K+R E +G E+ +L +H NIV L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIH 148
+ +LV+E++ ++ L L D E LE + + G+ + H+ ++H
Sbjct: 70 HTKKRLVLVFEHL-DQDLK-KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR----RVLH 123
Query: 149 RDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEY-AENGIVSIRTD 207
RD++P N+L+ + + DFGLAR T + TL Y AP+ + S D
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 208 VYAFGIILLQLMSG 221
+++ G I ++++G
Sbjct: 184 IWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 9/194 (4%)
Query: 31 LGEGGFGHVYKGELKDGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKNIVMLLGFC 88
+GEG +G VYK + G+ A K+R E +G E+ +L +H NIV L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIH 148
+ +LV+E++ ++ L L D E LE + + G+ + H+ ++H
Sbjct: 70 HTKKRLVLVFEHL-DQDLK-KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR----RVLH 123
Query: 149 RDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEY-AENGIVSIRTD 207
RD++P N+L+ + + DFGLAR T + TL Y AP+ + S D
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 208 VYAFGIILLQLMSG 221
+++ G I ++++G
Sbjct: 184 IWSVGCIFAEMVNG 197
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 31 LGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCC 89
LG+G FG VYK + K+ G + AAKV + S + ++ E+ +L H IV LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 90 KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHR 149
+ ++ E+ ++ + + + E Q + L FLH + IIHR
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTE-PQIQVVCRQMLEALNFLHSK----RIIHR 133
Query: 150 DMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYA-----ENGIVSI 204
D++ N+L+T + L DFG++ + +GT ++APE ++
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 193
Query: 205 RTDVYAFGIILLQL 218
+ D+++ GI L+++
Sbjct: 194 KADIWSLGITLIEM 207
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 32/267 (11%)
Query: 30 LLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQG---FAEFQSEVYVLNFARHKNIVMLL 85
+LG GG V+ +L+ + +A KV + + + F+ E H IV +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 86 GFCCKEN----LNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
E L +V EY+ +L + +TE + + + L F H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW--KTTDDPVQTK-ILGTLGYLAPEYAE 198
IIHRD++P+NI+++ + DFG+AR + + QT ++GT YL+PE A
Sbjct: 137 ----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 199 NGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWA-EPLIEKLALHELIDPRI 257
V R+DVY+ G +L ++++G G+ P Q E I A HE +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEP--PFTGDSPVSVAYQHVREDPIPPSARHE----GL 246
Query: 258 ENSYDTYELYLMAKTAYLCVQRNPEGR 284
D L +AK NPE R
Sbjct: 247 SADLDAVVLKALAK--------NPENR 265
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 32/267 (11%)
Query: 30 LLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQG---FAEFQSEVYVLNFARHKNIVMLL 85
+LG GG V+ +L+ + +A KV + + + F+ E H IV +
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 95
Query: 86 GFCCKEN----LNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
E L +V EY+ +L + +TE + + + L F H+
Sbjct: 96 DTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQALNFSHQNG 153
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW--KTTDDPVQTK-ILGTLGYLAPEYAE 198
IIHRD++P+NI+++ + DFG+AR + + QT ++GT YL+PE A
Sbjct: 154 ----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 209
Query: 199 NGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWA-EPLIEKLALHELIDPRI 257
V R+DVY+ G +L ++++G G+ P Q E I A HE +
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTGEP--PFTGDSPVSVAYQHVREDPIPPSARHE----GL 263
Query: 258 ENSYDTYELYLMAKTAYLCVQRNPEGR 284
D L +AK NPE R
Sbjct: 264 SADLDAVVLKALAK--------NPENR 282
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 15 FSEIQQATGDFSKENLLGEGGFGHVYKGEL------KDGQMIAAKVRKEASTQGF-AEFQ 67
EI + F +E LGE FG VYKG L + Q +A K K+ + EF+
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 68 SEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLF-------------DNT 114
E + +H N+V LLG K+ +++ Y + LH L D T
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 115 -ESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR 173
+S LE A G+ +L ++H+D+ N+L+ + D GL R
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSH----HVVHKDLATRNVLVYDKLNVKISDLGLFR 193
Query: 174 WKTTDDPVQTKILGT----LGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
D K+LG + ++APE G SI +D++++G++L ++ S
Sbjct: 194 EVYAAD--YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 24 DFSKENLLGEGGFGHV-YKGELKDGQMIAAKVRKE---ASTQGFAEFQSEVYVLNFARHK 79
+F LLG+G FG V E G+ A K+ K+ + A +E VL +RH
Sbjct: 11 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 70
Query: 80 NIVML-LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
+ L F + L V EY L +HL + + Y A I +A L +LH
Sbjct: 71 FLTALKYSFQTHDRL-CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYLH 127
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
E +++RD++ N++L D + DFGL + D GT YLAPE E
Sbjct: 128 SEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 184
Query: 199 NGIVSIRTDVYAFGIILLQLMSGR 222
+ D + G+++ ++M GR
Sbjct: 185 DNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 24 DFSKENLLGEGGFGHV-YKGELKDGQMIAAKVRKE---ASTQGFAEFQSEVYVLNFARHK 79
+F LLG+G FG V E G+ A K+ K+ + A +E VL +RH
Sbjct: 10 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 69
Query: 80 NIVML-LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
+ L F + L V EY L +HL + + Y A I +A L +LH
Sbjct: 70 FLTALKYSFQTHDRL-CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYLH 126
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
E +++RD++ N++L D + DFGL + D GT YLAPE E
Sbjct: 127 SEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 183
Query: 199 NGIVSIRTDVYAFGIILLQLMSGR 222
+ D + G+++ ++M GR
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 24 DFSKENLLGEGGFGHV-YKGELKDGQMIAAKVRKE---ASTQGFAEFQSEVYVLNFARHK 79
+F LLG+G FG V E G+ A K+ K+ + A +E VL +RH
Sbjct: 152 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 211
Query: 80 NIVML-LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
+ L F + L V EY L +HL + + Y A I +A L +LH
Sbjct: 212 FLTALKYSFQTHDRL-CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYLH 268
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
E +++RD++ N++L D + DFGL + D GT YLAPE E
Sbjct: 269 SEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 325
Query: 199 NGIVSIRTDVYAFGIILLQLMSGR 222
+ D + G+++ ++M GR
Sbjct: 326 DNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 24 DFSKENLLGEGGFGHV-YKGELKDGQMIAAKVRKE---ASTQGFAEFQSEVYVLNFARHK 79
+F LLG+G FG V E G+ A K+ K+ + A +E VL +RH
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 208
Query: 80 NIVML-LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
+ L F + L V EY L +HL + + Y A I +A L +LH
Sbjct: 209 FLTALKYSFQTHDRL-CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYLH 265
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
E +++RD++ N++L D + DFGL + D GT YLAPE E
Sbjct: 266 SEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 322
Query: 199 NGIVSIRTDVYAFGIILLQLMSGR 222
+ D + G+++ ++M GR
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 24 DFSKENLLGEGGFGHV-YKGELKDGQMIAAKVRKE---ASTQGFAEFQSEVYVLNFARHK 79
+F LLG+G FG V E G+ A K+ K+ + A +E VL +RH
Sbjct: 9 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 68
Query: 80 NIVML-LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
+ L F + L V EY L +HL + + Y A I +A L +LH
Sbjct: 69 FLTALKYSFQTHDRL-CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYLH 125
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
E +++RD++ N++L D + DFGL + D GT YLAPE E
Sbjct: 126 SEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 182
Query: 199 NGIVSIRTDVYAFGIILLQLMSGR 222
+ D + G+++ ++M GR
Sbjct: 183 DNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG+++L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 152
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAPEYA 197
+HRD+ N +L F + DFGLAR + + + K+ + ++A E
Sbjct: 153 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESL 209
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
+ + ++DV++FG++L +LM+
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG+++L +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 150
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAPEYA 197
+HRD+ N +L F + DFGLAR + + + K+ + ++A E
Sbjct: 151 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESL 207
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
+ + ++DV++FG++L +LM+
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG+++L +
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 170
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAPEYA 197
+HRD+ N +L F + DFGLAR + + + K+ + ++A E
Sbjct: 171 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESL 227
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
+ + ++DV++FG++L +LM+
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 125/292 (42%), Gaps = 38/292 (13%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG+++L +
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 147
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAPEYA 197
+HRD+ N +L F + DFGLAR + + + K+ + ++A E
Sbjct: 148 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESL 204
Query: 198 ENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRI 257
+ + ++DV++FG++L +LM+ G P + + + + L L+ P
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMT-------RGAPPYPDVNTF-DITVYLLQGRRLLQPE- 255
Query: 258 ENSYDTYELY-LMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDRFHHLGEKF 308
Y LY +M K C E RPS E+V + F +GE +
Sbjct: 256 ---YCPDPLYEVMLK----CWHPKAEMRPSFSELVSRISAIFSTF--IGEHY 298
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 15 FSEIQQATGDFSKENLLGEGGFGHVYKGEL------KDGQMIAAKVRKEASTQGF-AEFQ 67
EI + F +E LGE FG VYKG L + Q +A K K+ + EF+
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 68 SEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLF-------------DNT 114
E + +H N+V LLG K+ +++ Y + LH L D T
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 115 -ESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR 173
+S LE A G+ +L ++H+D+ N+L+ + D GL R
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSH----HVVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 174 WKTTDDPVQTKILGT----LGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
D K+LG + ++APE G SI +D++++G++L ++ S
Sbjct: 177 EVYAAD--YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG+++L +
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 144
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAPEYA 197
+HRD+ N +L F + DFGLAR + + + K+ + ++A E
Sbjct: 145 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESL 201
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
+ + ++DV++FG++L +LM+
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG+++L +
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 149
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAPEYA 197
+HRD+ N +L F + DFGLAR + + + K+ + ++A E
Sbjct: 150 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESL 206
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
+ + ++DV++FG++L +LM+
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMT 229
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 30 LLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAE---FQSEVYVLNFARHKNIVML 84
++G G FG VY G L DG+ I V+ E F +E ++ H N++ L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 85 LGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
LG C + E ++V Y+ + L + + T + + AKG+++L +
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 171
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAPEYA 197
+HRD+ N +L F + DFGLAR + + + K+ + ++A E
Sbjct: 172 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESL 228
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
+ + ++DV++FG++L +LM+
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 35/275 (12%)
Query: 25 FSKENLLGEGGFGHVYKG-ELKDGQMIAAKVRK-EASTQGFAEFQSEVYVLNFARHKNIV 82
F+K +G+G FG V+KG + + Q++A K+ E + + Q E+ VL+ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 83 MLLGFCCKENLNILVYEYICNKS----LHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
G K + ++ EY+ S L FD + + KGL +LH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKE-------ILKGLDYLH 137
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
E + IHRD++ +N+LL+ L DFG+A T + +GT ++APE +
Sbjct: 138 SEKK----IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQ 193
Query: 199 NGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIE 258
+ D+++ GI ++L GE P + P+ + + P +
Sbjct: 194 QSAYDSKADIWSLGITAIEL--------AKGEPPNSDMH----PMRVLFLIPKNNPPTLV 241
Query: 259 NSY-DTYELYLMAKTAYLCVQRNPEGRPSMGEVVR 292
+ +++ ++ A C+ ++P RP+ E+++
Sbjct: 242 GDFTKSFKEFIDA-----CLNKDPSFRPTAKELLK 271
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 20/222 (9%)
Query: 18 IQQATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFA-EFQSEVYVLNF 75
+ + DF ++LLGEG +G V K G+++A K + FA E+ +L
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNKSLH--WHLFDNTESVLEWHQRYAAAIGTAKG 133
+H+NI+ + ++ YI + + H +T+ + + H +Y T +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRA 124
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW-----KTTDDPV-----QT 183
++ LH G +IHRD++PSN+L+ + + DFGLAR +P T
Sbjct: 125 VKVLH----GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 184 KILGTLGYLAPEYA-ENGIVSIRTDVYAFGIILLQLMSGRKV 224
+ + T Y APE + S DV++ G IL +L R +
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 29 NLLGEGGFGHVYKGELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG 86
++LG G F V E K Q + A + KEA ++E+ VL+ +H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEECRGG 144
L+ + + LFD + +R A+ + +++LH+
Sbjct: 84 IYESGGHLYLIMQLVSGG----ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG--- 136
Query: 145 PIIHRDMRPSNIL---LTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYAEN 199
I+HRD++P N+L L D M+ DFGL++ +DP V + GT GY+APE
Sbjct: 137 -IVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
S D ++ G+I L+ G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQMIAA--KVRKEASTQGF-AEFQSEVYVLNFARHKNI 81
+ K +GEG +G V+K + ++ I A +VR + +G + E+ +L +HKNI
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
V L + LV+E+ C++ L + FD+ L+ + KGL F C
Sbjct: 64 VRLHDVLHSDKKLTLVFEF-CDQDLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGF----C 117
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENG- 200
++HRD++P N+L+ + L DFGLAR + + TL Y P+
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 201 IVSIRTDVYAFGIILLQLMSGRK 223
+ S D+++ G I +L + +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAAR 200
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 18 IQQATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKV---RKEASTQGFAEFQSEVYVL 73
I DFS ++G GGFG VY D G+M A K ++ QG +E +L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 74 NFARHKN----IVMLLGFCCKENLNILVYEYICNKSLHWHLFDN---TESVLEWHQRYAA 126
+ + + M F + L+ ++ + + LH+HL + +E+ + + YAA
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRF---YAA 299
Query: 127 AIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
I GL +H +++RD++P+NILL + D GLA + P + +
Sbjct: 300 EI--ILGLEHMHNRF----VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--V 351
Query: 187 GTLGYLAPEYAENGIV-SIRTDVYAFGIILLQLMSG 221
GT GY+APE + G+ D ++ G +L +L+ G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 20/222 (9%)
Query: 18 IQQATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFA-EFQSEVYVLNF 75
+ + DF ++LLGEG +G V K G+++A K + FA E+ +L
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNKSLH--WHLFDNTESVLEWHQRYAAAIGTAKG 133
+H+NI+ + ++ YI + + H +T+ + + H +Y T +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRA 124
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW-----KTTDDPV-----QT 183
++ LH G +IHRD++PSN+L+ + + DFGLAR +P T
Sbjct: 125 VKVLH----GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 184 KILGTLGYLAPEYA-ENGIVSIRTDVYAFGIILLQLMSGRKV 224
+ + T Y APE + S DV++ G IL +L R +
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 30 LLGEGGFGHVYKGE----LKDGQMIAAKVRKEA----STQGFAEFQSEVYVLNFARHKNI 81
+LG+GG+G V++ G++ A KV K+A + + A ++E +L +H I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
V L+ L+ EY+ L L + + Y A I A G LH++
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG--HLHQKG 141
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
II+RD++P NI+L H L DFGL + D V GT+ Y+APE
Sbjct: 142 ----IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSG 197
Query: 202 VSIRTDVYAFGIILLQLMSG 221
+ D ++ G ++ +++G
Sbjct: 198 HNRAVDWWSLGALMYDMLTG 217
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 18 IQQATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKV---RKEASTQGFAEFQSEVYVL 73
I DFS ++G GGFG VY D G+M A K ++ QG +E +L
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 74 NFARHKN----IVMLLGFCCKENLNILVYEYICNKSLHWHLFDN---TESVLEWHQRYAA 126
+ + + M F + L+ ++ + + LH+HL + +E+ + + YAA
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRF---YAA 298
Query: 127 AIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
I GL +H +++RD++P+NILL + D GLA + P + +
Sbjct: 299 EI--ILGLEHMHNRF----VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--V 350
Query: 187 GTLGYLAPEYAENGIV-SIRTDVYAFGIILLQLMSG 221
GT GY+APE + G+ D ++ G +L +L+ G
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 30 LLGEGGFGHVYKGE----LKDGQMIAAKVRKEA----STQGFAEFQSEVYVLNFARHKNI 81
+LG+GG+G V++ G++ A KV K+A + + A ++E +L +H I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
V L+ L+ EY+ L L + + Y A I A G LH++
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG--HLHQKG 141
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
II+RD++P NI+L H L DFGL + D V GT+ Y+APE
Sbjct: 142 ----IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSG 197
Query: 202 VSIRTDVYAFGIILLQLMSG 221
+ D ++ G ++ +++G
Sbjct: 198 HNRAVDWWSLGALMYDMLTG 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 29 NLLGEGGFGHVYKGELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG 86
++LG G F V E K Q + A + KEA ++E+ VL+ +H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEECRGG 144
L+ + + LFD + +R A+ + +++LH+
Sbjct: 84 IYESGGHLYLIMQLVSGG----ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG--- 136
Query: 145 PIIHRDMRPSNIL---LTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYAEN 199
I+HRD++P N+L L D M+ DFGL++ +DP V + GT GY+APE
Sbjct: 137 -IVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
S D ++ G+I L+ G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 18 IQQATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKV---RKEASTQGFAEFQSEVYVL 73
I DFS ++G GGFG VY D G+M A K ++ QG +E +L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 74 NFARHKN----IVMLLGFCCKENLNILVYEYICNKSLHWHLFDN---TESVLEWHQRYAA 126
+ + + M F + L+ ++ + + LH+HL + +E+ + + YAA
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRF---YAA 299
Query: 127 AIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
I GL +H +++RD++P+NILL + D GLA + P + +
Sbjct: 300 EI--ILGLEHMHNRF----VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--V 351
Query: 187 GTLGYLAPEYAENGIV-SIRTDVYAFGIILLQLMSG 221
GT GY+APE + G+ D ++ G +L +L+ G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 18 IQQATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKV---RKEASTQGFAEFQSEVYVL 73
I DFS ++G GGFG VY D G+M A K ++ QG +E +L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 74 NFARHKN----IVMLLGFCCKENLNILVYEYICNKSLHWHLFDN---TESVLEWHQRYAA 126
+ + + M F + L+ ++ + + LH+HL + +E+ + + YAA
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRF---YAA 299
Query: 127 AIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
I GL +H +++RD++P+NILL + D GLA + P + +
Sbjct: 300 EI--ILGLEHMHNRF----VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--V 351
Query: 187 GTLGYLAPEYAENGIV-SIRTDVYAFGIILLQLMSG 221
GT GY+APE + G+ D ++ G +L +L+ G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 29 NLLGEGGFGHVYKGELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG 86
++LG G F V E K Q + A + KEA ++E+ VL+ +H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEECRGG 144
L+ + + LFD + +R A+ + +++LH+
Sbjct: 84 IYESGGHLYLIMQLVSGG----ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG--- 136
Query: 145 PIIHRDMRPSNIL---LTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYAEN 199
I+HRD++P N+L L D M+ DFGL++ +DP V + GT GY+APE
Sbjct: 137 -IVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
S D ++ G+I L+ G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 18 IQQATGDFSK----ENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQS---E 69
+Q +T FS + +LG+G FG V + K GQ A KV + + + +S E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 70 VYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI- 128
V +L H NI+ L F + LV E LFD S + + AA I
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG----GELFDEIISRKRFSEVDAARII 132
Query: 129 -GTAKGLRFLHEECRGGPIIHRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTK 184
G+ ++H+ I+HRD++P N+LL + D + DFGL+ ++ K
Sbjct: 133 RQVLSGITYMHK----NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 188
Query: 185 ILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
I GT Y+APE +G + DV++ G+IL L+SG
Sbjct: 189 I-GTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 223
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 16/233 (6%)
Query: 31 LGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV-MLLGFC 88
+GEG G V K G+ +A K+ Q +EV ++ +H N+V M +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTA--KGLRFLHEECRGGPI 146
E L +L+ E++ +L + S + ++ A + A + L +LH + +
Sbjct: 113 VGEELWVLM-EFLQGGAL-----TDIVSQVRLNEEQIATVCEAVLQALAYLHAQG----V 162
Query: 147 IHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRT 206
IHRD++ +ILLT D L DFG + D P + ++GT ++APE + +
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 207 DVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
D+++ GI++++++ G + P Q++++ + KL + P + +
Sbjct: 223 DIWSLGIMVIEMVDGEP--PYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRD 273
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 8/192 (4%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCC 89
+G+G G VY ++ GQ +A + +E+ V+ ++ NIV L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 90 KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHR 149
+ +V EY+ SL + TE+ ++ Q A + L FLH +IHR
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLH----SNQVIHR 141
Query: 150 DMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDVY 209
+++ NILL D L DFG T + ++ ++GT ++APE + D++
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 210 AFGIILLQLMSG 221
+ GI+ ++++ G
Sbjct: 202 SLGIMAIEMIEG 213
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 18 IQQATGDFSK----ENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQS---E 69
+Q +T FS + +LG+G FG V + K GQ A KV + + + +S E
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 99
Query: 70 VYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI- 128
V +L H NI+ L F + LV E LFD S + + AA I
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG----GELFDEIISRKRFSEVDAARII 155
Query: 129 -GTAKGLRFLHEECRGGPIIHRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTK 184
G+ ++H+ I+HRD++P N+LL + D + DFGL+ ++ K
Sbjct: 156 RQVLSGITYMHK----NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 211
Query: 185 ILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
I GT Y+APE +G + DV++ G+IL L+SG
Sbjct: 212 I-GTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 246
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 31 LGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV-MLLGFC 88
+GEG G V ++ G+++A K Q +EV ++ +H+N+V M +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIH 148
+ L + V E++ +L + T + + Q A + + L LH + +IH
Sbjct: 97 VGDELWV-VMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG----VIH 148
Query: 149 RDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDV 208
RD++ +ILLTHD L DFG + + P + ++GT ++APE D+
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 208
Query: 209 YAFGIILLQLMSG 221
++ GI++++++ G
Sbjct: 209 WSLGIMVIEMVDG 221
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 10/194 (5%)
Query: 31 LGEGGFGHVYKGELKD-GQMIAAK-VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFC 88
LGEG +G VYK K+ GQ++A K V E+ Q E E+ ++ ++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ---EIIKEISIMQQCDSPHVVKYYGSY 93
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIH 148
K +V EY C + L + T KGL +LH + IH
Sbjct: 94 FKNTDLWIVMEY-CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK----IH 148
Query: 149 RDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDV 208
RD++ NILL + L DFG+A T + ++GT ++APE + + D+
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADI 208
Query: 209 YAFGIILLQLMSGR 222
++ GI +++ G+
Sbjct: 209 WSLGITAIEMAEGK 222
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 31 LGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV-MLLGFC 88
+GEG G V ++ G+++A K Q +EV ++ +H+N+V M +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIH 148
+ L + V E++ +L + T + + Q A + + L LH + +IH
Sbjct: 142 VGDELWV-VMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG----VIH 193
Query: 149 RDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDV 208
RD++ +ILLTHD L DFG + + P + ++GT ++APE D+
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 253
Query: 209 YAFGIILLQLMSG 221
++ GI++++++ G
Sbjct: 254 WSLGIMVIEMVDG 266
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 18 IQQATGDFSK----ENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQS---E 69
+Q +T FS + +LG+G FG V + K GQ A KV + + + +S E
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 100
Query: 70 VYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI- 128
V +L H NI+ L F + LV E LFD S + + AA I
Sbjct: 101 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG----GELFDEIISRKRFSEVDAARII 156
Query: 129 -GTAKGLRFLHEECRGGPIIHRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTK 184
G+ ++H+ I+HRD++P N+LL + D + DFGL+ ++ K
Sbjct: 157 RQVLSGITYMHK----NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 212
Query: 185 ILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
I GT Y+APE +G + DV++ G+IL L+SG
Sbjct: 213 I-GTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 247
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 10/223 (4%)
Query: 5 LYMKDPMKFSFSEIQQATGD-FSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQ- 61
+Y +++ + E Q T + F + +LG+GGFG V +++ G+M A K ++ +
Sbjct: 165 IYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK 224
Query: 62 --GFAEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLE 119
G A +E +L + +V L ++ LV + L +H++ ++
Sbjct: 225 RKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 120 WHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD 179
+ A GL LH E I++RD++P NILL + D GLA
Sbjct: 285 EARAVFYAAEICCGLEDLHRE----RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340
Query: 180 PVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGR 222
++ ++ GT+GY+APE +N + D +A G +L ++++G+
Sbjct: 341 TIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 10/223 (4%)
Query: 5 LYMKDPMKFSFSEIQQATGD-FSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQ- 61
+Y +++ + E Q T + F + +LG+GGFG V +++ G+M A K ++ +
Sbjct: 165 IYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK 224
Query: 62 --GFAEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLE 119
G A +E +L + +V L ++ LV + L +H++ ++
Sbjct: 225 RKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 120 WHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD 179
+ A GL LH E I++RD++P NILL + D GLA
Sbjct: 285 EARAVFYAAEICCGLEDLHRE----RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340
Query: 180 PVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGR 222
++ ++ GT+GY+APE +N + D +A G +L ++++G+
Sbjct: 341 TIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 31 LGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV-MLLGFC 88
+GEG G V ++ G+++A K Q +EV ++ +H+N+V M +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIH 148
+ L + V E++ +L + T + + Q A + + L LH + +IH
Sbjct: 219 VGDELWV-VMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG----VIH 270
Query: 149 RDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDV 208
RD++ +ILLTHD L DFG + + P + ++GT ++APE D+
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 330
Query: 209 YAFGIILLQLMSG 221
++ GI++++++ G
Sbjct: 331 WSLGIMVIEMVDG 343
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 31 LGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV-MLLGFC 88
+GEG G V ++ G+++A K Q +EV ++ +H+N+V M +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIH 148
+ L + V E++ +L + T + + Q A + + L LH + +IH
Sbjct: 99 VGDELWV-VMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG----VIH 150
Query: 149 RDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDV 208
RD++ +ILLTHD L DFG + + P + ++GT ++APE D+
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 210
Query: 209 YAFGIILLQLMSG 221
++ GI++++++ G
Sbjct: 211 WSLGIMVIEMVDG 223
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 32/237 (13%)
Query: 24 DFSKENLLGEGGFGHVYKGE-LKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+ K +LG G FG V+KG + +G+ I V ++ Q F + +
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 78 HKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDN-----TESVLEWHQRYAAAIGTAK 132
H +IV LLG C +L LV +Y+ SL H+ + + +L W + AK
Sbjct: 92 HAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAK 144
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLG 190
G+ +L E ++HR++ N+LL + DFG+A DD + ++ +
Sbjct: 145 GMYYLEEHG----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 200
Query: 191 YLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEP-LIEK 246
++A E G + ++DV+++G+ + +LM+ G EP LR P L+EK
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMT-------FGAEPYAGLRLAEVPDLLEK 250
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 31 LGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV-MLLGFC 88
+GEG G V ++ G+++A K Q +EV ++ +H+N+V M +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIH 148
+ L + V E++ +L + T + + Q A + + L LH + +IH
Sbjct: 88 VGDELWV-VMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG----VIH 139
Query: 149 RDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDV 208
RD++ +ILLTHD L DFG + + P + ++GT ++APE D+
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 199
Query: 209 YAFGIILLQLMSG 221
++ GI++++++ G
Sbjct: 200 WSLGIMVIEMVDG 212
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 32/237 (13%)
Query: 24 DFSKENLLGEGGFGHVYKGE-LKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+ K +LG G FG V+KG + +G+ I V ++ Q F + +
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 78 HKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDN-----TESVLEWHQRYAAAIGTAK 132
H +IV LLG C +L LV +Y+ SL H+ + + +L W + AK
Sbjct: 74 HAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAK 126
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLG 190
G+ +L E ++HR++ N+LL + DFG+A DD + ++ +
Sbjct: 127 GMYYLEEHG----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 191 YLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEP-LIEK 246
++A E G + ++DV+++G+ + +LM+ G EP LR P L+EK
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMT-------FGAEPYAGLRLAEVPDLLEK 232
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 108/234 (46%), Gaps = 12/234 (5%)
Query: 31 LGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV-MLLGFC 88
+GEG G V ++ G+++A K Q +EV ++ +H+N+V M +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIH 148
+ L + V E++ +L + T + + Q A + + L LH + +IH
Sbjct: 92 VGDELWV-VMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG----VIH 143
Query: 149 RDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDV 208
RD++ +ILLTHD L DFG + + P + ++GT ++APE D+
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 203
Query: 209 YAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYD 262
++ GI++++++ G E P ++++ + L +L + P ++ D
Sbjct: 204 WSLGIMVIEMVDGEP--PYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 255
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 24 DFSKENL-----LGEGGFGHVYKGELK-DGQMIAAK-VRKEASTQGFAEFQSEV-YVLNF 75
DF+ E+L +G G +G V K K GQ++A K +R + + ++ V+
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRS 77
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNK--SLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
+ IV G +E + E + + +++ + V+ + T K
Sbjct: 78 SDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKA 137
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLA 193
L L E + IIHRD++PSNILL L DFG++ + D +T+ G Y+A
Sbjct: 138 LNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGIS-GQLVDSIAKTRDAGCRPYMA 193
Query: 194 PE----YAENGIVSIRTDVYAFGIILLQLMSGR 222
PE A +R+DV++ GI L +L +GR
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 3 TELYMKDPMKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKV--RKEAS 59
+E M KFS ++ + LG+G F V + K G AAK+ K+ S
Sbjct: 17 SEFMMNASTKFS--------DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS 68
Query: 60 TQGFAEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLE 119
+ F + + E + +H NIV L +E+ + LV++ + L + E
Sbjct: 69 ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-----ARE 123
Query: 120 WHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDF---VPMLGDFGLARWKT 176
++ A+ + L + C I+HR+++P N+LL L DFGLA +
Sbjct: 124 FYSEADASHCIQQILESI-AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEV 181
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
D GT GYL+PE + S D++A G+IL L+ G
Sbjct: 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 20/222 (9%)
Query: 18 IQQATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFA-EFQSEVYVLNF 75
+ + DF ++LLGEG +G V K G+++A K + FA E+ +L
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNKSLH--WHLFDNTESVLEWHQRYAAAIGTAKG 133
+H+NI+ + ++ YI + + H +T+ + + H +Y T +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRA 124
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW---KTTDDPVQT------- 183
++ LH G +IHRD++PSN+L+ + + DFGLAR D+ T
Sbjct: 125 VKVLH----GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 184 KILGTLGYLAPEYA-ENGIVSIRTDVYAFGIILLQLMSGRKV 224
+ + T Y APE + S DV++ G IL +L R +
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 25 FSKENLLGEGGFGHVYKGELK-DGQMIAAK-VRKEASTQGFAEFQSEVYVLNFARHKNIV 82
F + LG G F V E K G++ A K + K+A + ++E+ VL +H+NIV
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEE 140
L N LV + + LFD + ++ A+ + + +LH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGG----ELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH-- 137
Query: 141 CRGGPIIHRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYA 197
R G I+HRD++P N+L + M+ DFGL++ + D V + GT GY+APE
Sbjct: 138 -RMG-IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD-VMSTACGTPGYVAPEVL 194
Query: 198 ENGIVSIRTDVYAFGIILLQLMSG 221
S D ++ G+I L+ G
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 133/318 (41%), Gaps = 55/318 (17%)
Query: 14 SFSEIQQATGDFSKENL-----LGEGGFGHVYKGEL-----KDG-QMIAAKVRKE-ASTQ 61
+F ++ +F ++NL LGEG FG V K + G +A K+ KE AS
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 62 GFAEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDN-------- 113
+ SE VL H +++ L G C ++ +L+ EY SL L ++
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 114 --------------TESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLT 159
E L + A ++G+++L E ++HRD+ NIL+
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS----LVHRDLAARNILVA 184
Query: 160 HDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTDVYAFGIILLQ 217
+ DFGL+R +D + G + ++A E + I + ++DV++FG++L +
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 218 LMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCV 277
+++ G P + E L L ++ S + Y L L C
Sbjct: 245 IVT-------LGGNPYPGIP--PERLFNLLKTGHRMERPDNCSEEMYRLMLQ------CW 289
Query: 278 QRNPEGRPSMGEVVRLLE 295
++ P+ RP ++ + LE
Sbjct: 290 KQEPDKRPVFADISKDLE 307
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAKV--RKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
+G+G F V + +L G AAK+ K+ S + + + E + +H NIV L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLR-FLHEECRGGPI 146
+E + LV++ + L F++ + E++ A+ + L LH C +
Sbjct: 72 ISEEGFHYLVFDLVTGGEL----FEDIVA-REYYSEADASHCIQQILEAVLH--CHQMGV 124
Query: 147 IHRDMRPSNILLTHDF---VPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVS 203
+HRD++P N+LL L DFGLA D GT GYL+PE
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYG 184
Query: 204 IRTDVYAFGIILLQLMSG 221
D++A G+IL L+ G
Sbjct: 185 KPVDIWACGVILYILLVG 202
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 30 LLGEGGFGHVYKGELKDG---QMIAAKVRKEA---STQGFAEFQSEVYVLNFARHKNIVM 83
LG+GGF + E+ D ++ A K+ ++ + E+ + H+++V
Sbjct: 24 FLGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
GF + +V E +C + L +++ E RY G ++LH
Sbjct: 82 FHGFFEDNDFVFVVLE-LCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHR---- 135
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVS 203
+IHRD++ N+ L D +GDFGLA D + + GT Y+APE S
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 204 IRTDVYAFGIILLQLMSGR 222
DV++ G I+ L+ G+
Sbjct: 196 FEVDVWSIGCIMYTLLVGK 214
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQMIAA--KVRKEASTQGF-AEFQSEVYVLNFARHKNI 81
+ K +GEG +G V+K + ++ I A +VR + +G + E+ +L +HKNI
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
V L + LV+E+ C++ L + FD+ L+ + KGL F C
Sbjct: 64 VRLHDVLHSDKKLTLVFEF-CDQDLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGF----C 117
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENG- 200
++HRD++P N+L+ + L +FGLAR + + TL Y P+
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 201 IVSIRTDVYAFGIILLQLM-SGRKVVDMNGEEPQ 233
+ S D+++ G I +L +GR + N + Q
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G+G +G V++G L G+ +A K+ Q + ++E+Y RH NI LGF
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNI---LGFIAS 70
Query: 91 E----NLNILVYEYICNKSLHWHLFDNTE-SVLEWHQRYAAAIGTAKGLRFLHEE---CR 142
+ N + ++ I + H L+D + LE H A+ A GL LH E +
Sbjct: 71 DMTSRNSSTQLW-LITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 143 GGPII-HRDMRPSNILLTHDFVPMLGDFGLARWKTTD----DPVQTKILGTLGYLAPEYA 197
G P I HRD + N+L+ + + D GLA + D +GT Y+APE
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 198 ENGIVS------IRTDVYAFGIILLQLMSGRKVVD 226
+ I + TD++AFG++L ++ + R +V+
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI-ARRTIVN 223
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 30 LLGEGGFGHVYKGELKDG---QMIAAKVRKEA---STQGFAEFQSEVYVLNFARHKNIVM 83
LG+GGF + E+ D ++ A K+ ++ + E+ + H+++V
Sbjct: 24 FLGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
GF + +V E +C + L +++ E RY G ++LH
Sbjct: 82 FHGFFEDNDFVFVVLE-LCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHR---- 135
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVS 203
+IHRD++ N+ L D +GDFGLA D + + GT Y+APE S
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 204 IRTDVYAFGIILLQLMSGR 222
DV++ G I+ L+ G+
Sbjct: 196 FEVDVWSIGCIMYTLLVGK 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 30 LLGEGGFGHVYKGELKDG---QMIAAKVRKEA---STQGFAEFQSEVYVLNFARHKNIVM 83
LG+GGF + E+ D ++ A K+ ++ + E+ + H+++V
Sbjct: 28 FLGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 85
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
GF + +V E +C + L +++ E RY G ++LH
Sbjct: 86 FHGFFEDNDFVFVVLE-LCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHR---- 139
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVS 203
+IHRD++ N+ L D +GDFGLA D + + GT Y+APE S
Sbjct: 140 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 199
Query: 204 IRTDVYAFGIILLQLMSGR 222
DV++ G I+ L+ G+
Sbjct: 200 FEVDVWSIGCIMYTLLVGK 218
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 31 LGEGGFGHVYKGELKD-GQMIAAKV--RKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
LG+G F V + K G AAK+ K+ S + F + + E + +H NIV L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPII 147
+E+ + LV++ + LF++ + E++ A+ + L + C I+
Sbjct: 73 IQEESFHYLVFDLVTGG----ELFEDIVA-REFYSEADASHCIQQILESI-AYCHSNGIV 126
Query: 148 HRDMRPSNILLTHDF---VPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
HR+++P N+LL L DFGLA + D GT GYL+PE + S
Sbjct: 127 HRNLKPENLLLASKAKGAAVKLADFGLAI-EVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 185
Query: 205 RTDVYAFGIILLQLMSG 221
D++A G+IL L+ G
Sbjct: 186 PVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 31 LGEGGFGHVYKGELKD-GQMIAAKV--RKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
LG+G F V + K G AAK+ K+ S + F + + E + +H NIV L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPII 147
+E+ + LV++ + LF++ + E++ A+ + L + C I+
Sbjct: 74 IQEESFHYLVFDLVTGG----ELFEDIVA-REFYSEADASHCIQQILESI-AYCHSNGIV 127
Query: 148 HRDMRPSNILLTHDF---VPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
HR+++P N+LL L DFGLA + D GT GYL+PE + S
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 205 RTDVYAFGIILLQLMSG 221
D++A G+IL L+ G
Sbjct: 187 PVDIWACGVILYILLVG 203
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 29 NLLGEGGFGHVYKGELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG 86
++LG G F V E K Q + A + K+A ++E+ VL+ +H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEECRGG 144
L+ + + LFD + +R A+ + +++LH+
Sbjct: 84 IYESGGHLYLIMQLVSGG----ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG--- 136
Query: 145 PIIHRDMRPSNIL---LTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYAEN 199
I+HRD++P N+L L D M+ DFGL++ +DP V + GT GY+APE
Sbjct: 137 -IVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
S D ++ G+I L+ G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 15/213 (7%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCC 89
LG G FG V++ E G AAK + E+ ++ RH +V L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 90 KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHR 149
+N +++YE++ L + D + E + KGL +HE +H
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSE-DEAVEYMRQVCKGLCHMHENN----YVHL 173
Query: 150 DMRPSNILLTHDFVPMLG--DFGLARWKTTDDPVQTK--ILGTLGYLAPEYAENGIVSIR 205
D++P NI+ T L DFGL DP Q+ GT + APE AE V
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLT---AHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 230
Query: 206 TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQ 238
TD+++ G++ L+SG + GE ++LR
Sbjct: 231 TDMWSVGVLSYILLSG--LSPFGGENDDETLRN 261
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 31 LGEGGFGHVYKGELKD-GQMIAAKV--RKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
LG+G F V + K G AAK+ K+ S + F + + E + +H NIV L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPII 147
+E+ + LV++ + LF++ + E++ A+ + L + C I+
Sbjct: 74 IQEESFHYLVFDLVTGG----ELFEDIVA-REFYSEADASHCIQQILESI-AYCHSNGIV 127
Query: 148 HRDMRPSNILLTHDF---VPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
HR+++P N+LL L DFGLA + D GT GYL+PE + S
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAI-EVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 205 RTDVYAFGIILLQLMSG 221
D++A G+IL L+ G
Sbjct: 187 PVDIWACGVILYILLVG 203
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 130/297 (43%), Gaps = 48/297 (16%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKV---RKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
+G+G +G V+ G+ + G+ +A KV +EAS F E +E+Y RH+NI LGF
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEAS--WFRE--TEIYQTVLMRHENI---LGF 96
Query: 88 CCKENLNI-------LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ L+ +Y N SL+ +L T L+ A + GL LH E
Sbjct: 97 IAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT---LDAKSMLKLAYSSVSGLCHLHTE 153
Query: 141 ---CRGGPII-HRDMRPSNILLTHDFVPMLGDFGLA-----RWKTTDDPVQTKILGTLGY 191
+G P I HRD++ NIL+ + + D GLA D P T++ GT Y
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRY 212
Query: 192 LAPEYAENGI------VSIRTDVYAFGIILLQLMSGRKVVDMNGEE----PQQSLRQWAE 241
+ PE + + I D+Y+FG+IL ++ R+ V E P L ++
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEEYQLPYHDLVP-SD 269
Query: 242 PLIE---KLALHELIDPRIENSYDTYE-LYLMAKTAYLCVQRNPEGRPSMGEVVRLL 294
P E ++ + + P N + + E L M K C NP R + V + L
Sbjct: 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTL 326
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 124/283 (43%), Gaps = 40/283 (14%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNI 81
DF K + LG G G V+K K ++ A+ + E + E+ VL+ I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYA------AAIGTAKGLR 135
V G + + E++ SL + VL+ R +I KGL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSL--------DQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPE 195
+L E+ + I+HRD++PSNIL+ L DFG++ D + +GT Y++PE
Sbjct: 119 YLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTRSYMSPE 173
Query: 196 YAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELID- 254
+ S+++D+++ G+ L+++ GR + P ++ + P +A+ EL+D
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI------PPPDAKEDSRP---PMAIFELLDY 224
Query: 255 ------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
P++ + + E C+ +NP R + +++
Sbjct: 225 IVNEPPPKLPSGVFSLEFQDFVNK---CLIKNPAERADLKQLM 264
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 133/318 (41%), Gaps = 55/318 (17%)
Query: 14 SFSEIQQATGDFSKENL-----LGEGGFGHVYKGEL-----KDG-QMIAAKVRKE-ASTQ 61
+F ++ +F ++NL LGEG FG V K + G +A K+ KE AS
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 62 GFAEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDN-------- 113
+ SE VL H +++ L G C ++ +L+ EY SL L ++
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 114 --------------TESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLT 159
E L + A ++G+++L E ++HRD+ NIL+
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM----KLVHRDLAARNILVA 184
Query: 160 HDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTDVYAFGIILLQ 217
+ DFGL+R +D + G + ++A E + I + ++DV++FG++L +
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 218 LMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCV 277
+++ G P + E L L ++ S + Y L L C
Sbjct: 245 IVT-------LGGNPYPGIP--PERLFNLLKTGHRMERPDNCSEEMYRLMLQ------CW 289
Query: 278 QRNPEGRPSMGEVVRLLE 295
++ P+ RP ++ + LE
Sbjct: 290 KQEPDKRPVFADISKDLE 307
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 30 LLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFC 88
+LG G F V+ + + G++ A K K++ + ++E+ VL +H+NIV L
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEECRGGPI 146
LV + + LFD + ++ A+ + +++LHE I
Sbjct: 76 ESTTHYYLVMQLVSGG----ELFDRILERGVYTEKDASLVIQQVLSAVKYLHE----NGI 127
Query: 147 IHRDMRPSNIL-LT--HDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVS 203
+HRD++P N+L LT + M+ DFGL+ K + + + GT GY+APE S
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLS--KMEQNGIMSTACGTPGYVAPEVLAQKPYS 185
Query: 204 IRTDVYAFGIILLQLMSG 221
D ++ G+I L+ G
Sbjct: 186 KAVDCWSIGVITYILLCG 203
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 30 LLGEGGFGHVYKGELKDG---QMIAAKVRKEA---STQGFAEFQSEVYVLNFARHKNIVM 83
LG+GGF + E+ D ++ A K+ ++ + E+ + H+++V
Sbjct: 22 FLGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 79
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
GF + +V E +C + L +++ E RY G ++LH
Sbjct: 80 FHGFFEDNDFVFVVLE-LCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHR---- 133
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVS 203
+IHRD++ N+ L D +GDFGLA D + + GT Y+APE S
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 204 IRTDVYAFGIILLQLMSGR 222
DV++ G I+ L+ G+
Sbjct: 194 FEVDVWSIGCIMYTLLVGK 212
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 30 LLGEGGFGHVYKGELKDG---QMIAAKVRKEA---STQGFAEFQSEVYVLNFARHKNIVM 83
LG+GGF + E+ D ++ A K+ ++ + E+ + H+++V
Sbjct: 46 FLGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 103
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
GF + +V E +C + L +++ E RY G ++LH
Sbjct: 104 FHGFFEDNDFVFVVLE-LCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHR---- 157
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVS 203
+IHRD++ N+ L D +GDFGLA D + + GT Y+APE S
Sbjct: 158 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 204 IRTDVYAFGIILLQLMSGR 222
DV++ G I+ L+ G+
Sbjct: 218 FEVDVWSIGCIMYTLLVGK 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 30 LLGEGGFGHVYKGELKDG---QMIAAKVRKEA---STQGFAEFQSEVYVLNFARHKNIVM 83
LG+GGF + E+ D ++ A K+ ++ + E+ + H+++V
Sbjct: 48 FLGKGGFAKCF--EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 105
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
GF + +V E +C + L +++ E RY G ++LH
Sbjct: 106 FHGFFEDNDFVFVVLE-LCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHR---- 159
Query: 144 GPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVS 203
+IHRD++ N+ L D +GDFGLA D + + GT Y+APE S
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 204 IRTDVYAFGIILLQLMSGR 222
DV++ G I+ L+ G+
Sbjct: 220 FEVDVWSIGCIMYTLLVGK 238
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 15/213 (7%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCC 89
LG G FG V++ E G AAK + E+ ++ RH +V L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 90 KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHR 149
+N +++YE++ L + D + E + KGL +HE +H
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSE-DEAVEYMRQVCKGLCHMHENN----YVHL 279
Query: 150 DMRPSNILLTHDFVPMLG--DFGLARWKTTDDPVQTK--ILGTLGYLAPEYAENGIVSIR 205
D++P NI+ T L DFGL DP Q+ GT + APE AE V
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLT---AHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 336
Query: 206 TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQ 238
TD+++ G++ L+SG + GE ++LR
Sbjct: 337 TDMWSVGVLSYILLSG--LSPFGGENDDETLRN 367
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 133/318 (41%), Gaps = 55/318 (17%)
Query: 14 SFSEIQQATGDFSKENL-----LGEGGFGHVYKGEL-----KDG-QMIAAKVRKE-ASTQ 61
+F ++ +F ++NL LGEG FG V K + G +A K+ KE AS
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 62 GFAEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDN-------- 113
+ SE VL H +++ L G C ++ +L+ EY SL L ++
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 114 --------------TESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLT 159
E L + A ++G+++L E ++HRD+ NIL+
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM----KLVHRDLAARNILVA 184
Query: 160 HDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTDVYAFGIILLQ 217
+ DFGL+R +D + G + ++A E + I + ++DV++FG++L +
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 218 LMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCV 277
+++ G P + E L L ++ S + Y L L C
Sbjct: 245 IVT-------LGGNPYPGIP--PERLFNLLKTGHRMERPDNCSEEMYRLMLQ------CW 289
Query: 278 QRNPEGRPSMGEVVRLLE 295
++ P+ RP ++ + LE
Sbjct: 290 KQEPDKRPVFADISKDLE 307
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 32/239 (13%)
Query: 1 MKTELYMKDPMKFSFSEIQQATGDFSKEN------LLGEGGFGHVYKG-ELKDGQMI--- 50
++TEL +P+ S + QA KE +LG G FG VYKG + +G+ +
Sbjct: 12 LETELV--EPLTPSGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIP 69
Query: 51 -AAKVRKEAS-TQGFAEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHW 108
A K+ E + + EF E ++ H ++V LLG C + LV + + + L
Sbjct: 70 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLE 128
Query: 109 HLFDNTESV-----LEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFV 163
++ ++ +++ L W + AKG+ +L E ++HRD+ N+L+
Sbjct: 129 YVHEHKDNIGSQLLLNW------CVQIAKGMMYLEER----RLVHRDLAARNVLVKSPNH 178
Query: 164 PMLGDFGLARWKTTDDPVQTKILG--TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
+ DFGLAR D+ G + ++A E + ++DV+++G+ + +LM+
Sbjct: 179 VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 115/277 (41%), Gaps = 21/277 (7%)
Query: 23 GDFSKENLLGEGGFGHVYKGE-LKDGQMIAAK---VRKEASTQGFAEFQSEVYVLNFARH 78
+F E +G G F VY+ L DG +A K + + A+ E+ +L H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSLHWHL--FDNTESVLEWHQRYAAAIGTAKGLRF 136
N++ ++N +V E L + F + ++ + + L
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 137 LHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEY 196
+H ++HRD++P+N+ +T V LGD GL R+ ++ ++GT Y++PE
Sbjct: 152 MHSR----RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 207
Query: 197 AENGIVSIRTDVYAFGIILLQLMSGRKVV---DMNGEEPQQSLRQWAEPLIE-------- 245
+ ++D+++ G +L ++ + + MN + + Q P +
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEEL 267
Query: 246 KLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPE 282
+ ++ I+P E D +Y +AK + C + E
Sbjct: 268 RQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLE 304
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 24/213 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAA-KV--RKEASTQGFA-EFQSEVYVLNFARHK 79
DF LG+G FG+VY K + I A KV + + +G + + E+ + + RH
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 80 NIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIGTAKGL 134
NI+ + + L+ E+ L+ L FD S + A L
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE-------LADAL 127
Query: 135 RFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL-GTLGYLA 193
+ HE +IHRD++P N+L+ + + DFG W ++ + + GTL YL
Sbjct: 128 HYCHER----KVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSLRRRXMCGTLDYLP 180
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVD 226
PE E + D++ G++ + + G D
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 19 QQATGDFSKENLLGEGGFGHV-----YKGELKDG-QMIAAKVRKEASTQGFAEFQSEVYV 72
++ G + LGEG FG V YK + K + I+ ++ K++ + E+
Sbjct: 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMH--MRVEREISY 62
Query: 73 LNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
L RH +I+ L ++V EY L ++ + + +R+ I A
Sbjct: 63 LKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAI 121
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYL 192
E C I+HRD++P N+LL + + DFGL+ T + ++T G+ Y
Sbjct: 122 ------EYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS-CGSPNYA 174
Query: 193 APEYAENGIVS-IRTDVYAFGIILLQLMSGR 222
APE + + DV++ GI+L ++ GR
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 26/214 (12%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAA-KV--RKEASTQGFA-EFQSEVYVLNFARHK 79
DF LG+G FG+VY K + I A KV + + +G + + E+ + + RH
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 80 NIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIGT-AKG 133
NI+ + + L+ E+ L+ L FD QR A + A
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE--------QRSATFMEELADA 126
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL-GTLGYL 192
L + HE +IHRD++P N+L+ + + DFG W ++ + + GTL YL
Sbjct: 127 LHYCHER----KVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSLRRRXMCGTLDYL 179
Query: 193 APEYAENGIVSIRTDVYAFGIILLQLMSGRKVVD 226
PE E + D++ G++ + + G D
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 24/213 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAA-KV--RKEASTQGFA-EFQSEVYVLNFARHK 79
DF LG+G FG+VY K + I A KV + + +G + + E+ + + RH
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 80 NIVMLLGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIGTAKGL 134
NI+ + + L+ E+ L+ L FD S + A L
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE-------LADAL 128
Query: 135 RFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL-GTLGYLA 193
+ HE +IHRD++P N+L+ + + DFG W ++ + + GTL YL
Sbjct: 129 HYCHER----KVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSLRRRXMCGTLDYLP 181
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVD 226
PE E + D++ G++ + + G D
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 31 LGEGGFGHVY--KGELKDGQMIAAKVRKEA-STQGFAEFQSEVYVLNFARHKNIVMLLGF 87
LG G +G V + ++ + +RK + ST ++ EV VL H NI+ L F
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEECRGGP 145
+ LV E C K LFD +++++ AA I G+ +LH+
Sbjct: 105 FEDKRNYYLVME--CYKG--GELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH----N 156
Query: 146 IIHRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIV 202
I+HRD++P N+LL D + + DFGL+ ++ + LGT Y+APE
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER-LGTAYYIAPEVLRKKYD 215
Query: 203 SIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQ 238
+ DV++ G+IL L++G G+ Q+ LR+
Sbjct: 216 E-KCDVWSIGVILFILLAGYP--PFGGQTDQEILRK 248
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 24/210 (11%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+ K +LG G FG VYKG + DG+ + V R+ S + E E YV+
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 78 HKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDN-----TESVLEWHQRYAAAIGTAK 132
+ LLG C + LV + + L H+ +N ++ +L W + AK
Sbjct: 78 SPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAK 130
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLG 190
G+ +L E+ R ++HRD+ N+L+ + DFGLAR D+ G +
Sbjct: 131 GMSYL-EDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIK 186
Query: 191 YLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
++A E + ++DV+++G+ + +LM+
Sbjct: 187 WMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 18 IQQATGDFSK----ENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQS---E 69
+Q +T FS + +LG+G FG V + K GQ A KV + + + +S E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 70 VYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI- 128
V +L H NI L F + LV E LFD S + + AA I
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTG----GELFDEIISRKRFSEVDAARII 132
Query: 129 -GTAKGLRFLHEECRGGPIIHRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTK 184
G+ + H+ I+HRD++P N+LL + D + DFGL+ + K
Sbjct: 133 RQVLSGITYXHK----NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK 188
Query: 185 ILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
I GT Y+APE +G + DV++ G+IL L+SG
Sbjct: 189 I-GTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 223
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 29 NLLGEGGFGHVYKGELK--DGQMIAAKVRK----EASTQGFAEFQSEVYVLNFARHKNIV 82
+LGEG FG V +G LK DG + V+ +S + EF SE + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 83 MLLGFCCKENLN-----ILVYEYICNKSLHWHLF----DNTESVLEWHQRYAAAIGTAKG 133
LLG C + + +++ ++ LH +L + + + A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GY 191
+ +L +HRD+ N +L D + DFGL++ + D + + + +
Sbjct: 160 MEYLSNR----NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHE 251
+A E + + + ++DV+AFG+ + ++ + G P + Q E L H
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIAT-------RGMTPYPGV-QNHEMYDYLLHGHR 267
Query: 252 LIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRL 293
L P E+ D ELY + Y C + +P RP+ V+RL
Sbjct: 268 LKQP--EDCLD--ELY---EIMYSCWRTDPLDRPTFS-VLRL 301
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQ---SEVYVLNFARHK 79
DF LG G FG V+ + +G+ A KV K+ + + E +L+ H
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 80 NIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHE 139
I+ + G ++ +YI L L + + YAA + A L +LH
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA--LEYLHS 124
Query: 140 ECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
+ II+RD++P NILL + + DFG A++ V + GT Y+APE
Sbjct: 125 KD----IIYRDLKPENILLDKNGHIKITDFGFAKYVPD---VTYXLCGTPDYIAPEVVST 177
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ D ++FGI++ ++++G
Sbjct: 178 KPYNKSIDWWSFGILIYEMLAG 199
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
Query: 31 LGEGGFGHVYKGEL------KDGQMIAAK-VRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
+GEG FG V++ + M+A K +++EAS A+FQ E ++ + NIV
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESV----------------------LEWH 121
LLG C L++EY+ L+ L + L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 122 QRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPV 181
++ A A G+ +L E +HRD+ N L+ + V + DFGL+R + D
Sbjct: 175 EQLCIARQVAAGMAYLSER----KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 182 QTKILGTLG--YLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
+ + ++ PE + +DV+A+G++L ++ S
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 13/225 (5%)
Query: 31 LGEGGFGHV-YKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV-MLLGFC 88
+GEG G V E G+ +A K Q +EV ++ H N+V M +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIH 148
+ L + V E++ +L + T + + Q + + L +LH + +IH
Sbjct: 113 VGDELWV-VMEFLEGGALTDIV---THTRMNEEQIATVCLSVLRALSYLHNQG----VIH 164
Query: 149 RDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDV 208
RD++ +ILLT D L DFG + + P + ++GT ++APE D+
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDI 224
Query: 209 YAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLA-LHEL 252
++ GI++++++ G E P Q++R+ + L ++ LH++
Sbjct: 225 WSLGIMVIEMIDGEP--PYFNEPPLQAMRRIRDSLPPRVKDLHKV 267
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 21 ATGDFSKENLLGEGGFGHVYKGELKD--GQMIAAKVR---KEASTQGFAEFQSEVYVLNF 75
A D +LGEG FG VY+G + G+ I V+ K+ + +F SE ++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLR 135
H +IV L+G +E I++ Y + H+ + ++ L+ ++ K +
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHY--LERNKNSLKVLTLVLYSLQICKAMA 139
Query: 136 FLHE-ECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG-TLGYLA 193
+L C +HRD+ NIL+ LGDFGL+R+ +D + + + +++
Sbjct: 140 YLESINC-----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS 194
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMS 220
PE + +DV+ F + + +++S
Sbjct: 195 PESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMI----AAKVRKEAS-TQGFAEFQSEVYVLNFAR 77
+ + +LG G FG VYKG + +G+ + A K+ E + + EF E ++
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 78 HKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESV-----LEWHQRYAAAIGTAK 132
H ++V LLG C + LV + + + L ++ ++ +++ L W + AK
Sbjct: 76 HPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAK 128
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLG 190
G+ +L E ++HRD+ N+L+ + DFGLAR D+ G +
Sbjct: 129 GMMYLEER----RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 184
Query: 191 YLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
++A E + ++DV+++G+ + +LM+
Sbjct: 185 WMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 21 ATGDFSKENLLGEGGFGHVYKGELKD--GQMIAAKVR---KEASTQGFAEFQSEVYVLNF 75
A D +LGEG FG VY+G + G+ I V+ K+ + +F SE ++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLR 135
H +IV L+G +E I++ Y + H+ + ++ L+ ++ K +
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHY--LERNKNSLKVLTLVLYSLQICKAMA 123
Query: 136 FLHE-ECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG-TLGYLA 193
+L C +HRD+ NIL+ LGDFGL+R+ +D + + + +++
Sbjct: 124 YLESINC-----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS 178
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMS 220
PE + +DV+ F + + +++S
Sbjct: 179 PESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 21 ATGDFSKENLLGEGGFGHVYKGELKD--GQMIAAKVR---KEASTQGFAEFQSEVYVLNF 75
A D +LGEG FG VY+G + G+ I V+ K+ + +F SE ++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLR 135
H +IV L+G +E I++ Y + H+ + ++ L+ ++ K +
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHY--LERNKNSLKVLTLVLYSLQICKAMA 127
Query: 136 FLHE-ECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG-TLGYLA 193
+L C +HRD+ NIL+ LGDFGL+R+ +D + + + +++
Sbjct: 128 YLESINC-----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS 182
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMS 220
PE + +DV+ F + + +++S
Sbjct: 183 PESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V ++K G IA K R S E+ +L +H+N++ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 173
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI-VS 203
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N + +
Sbjct: 174 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 230
Query: 204 IRTDVYAFGIILLQLMSGRKVVDMNG--EEPQQSLRQWAEP---LIEKLALHE 251
+ D+++ G I+ +L++GR + + QQ +R P +I ++ HE
Sbjct: 231 MTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHE 283
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 86 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 139
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 140 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 133 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 132 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 82 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 135
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 136 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 133 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 133 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 132 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 131 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 134 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 137 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 79 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 133 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 76 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 130 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 130 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 101 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 154
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 155 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 110 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 163
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 164 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNI 81
DF K + LG G G V+K K ++ A+ + E + E+ VL+ I
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYA------AAIGTAKGLR 135
V G + + E++ SL + VL+ R +I KGL
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSL--------DQVLKKAGRIPEQILGKVSIAVIKGLT 180
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPE 195
+L E+ + I+HRD++PSNIL+ L DFG++ D + +GT Y++PE
Sbjct: 181 YLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTRSYMSPE 235
Query: 196 YAENGIVSIRTDVYAFGIILLQLMSGR 222
+ S+++D+++ G+ L+++ GR
Sbjct: 236 RLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 130 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNI 81
DF K + LG G G V+K K ++ A+ + E + E+ VL+ I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYA------AAIGTAKGLR 135
V G + + E++ SL + VL+ R +I KGL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSL--------DQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPE 195
+L E+ + I+HRD++PSNIL+ L DFG++ D + +GT Y++PE
Sbjct: 119 YLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTRSYMSPE 173
Query: 196 YAENGIVSIRTDVYAFGIILLQLMSGR 222
+ S+++D+++ G+ L+++ GR
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 15/214 (7%)
Query: 14 SFSEIQQATGDFSKENLLGEGGFGHVYKGE-LKDGQMIAAKV--RKEASTQGFAEFQSEV 70
S ++ Q G++ + +G+G F V + G+ +A K+ + + + + EV
Sbjct: 6 SATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREV 65
Query: 71 YVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGT 130
++ H NIV L E LV EY +FD L H R
Sbjct: 66 RIMKILNHPNIVKLFEVIETEKTLYLVMEYASG----GEVFD----YLVAHGRMKEKEAR 117
Query: 131 AKGLRFLH--EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT 188
AK + + + C I+HRD++ N+LL D + DFG + T + + T G+
Sbjct: 118 AKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT-FCGS 176
Query: 189 LGYLAPE-YAENGIVSIRTDVYAFGIILLQLMSG 221
Y APE + DV++ G+IL L+SG
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNI 81
DF K + LG G G V+K K ++ A+ + E + E+ VL+ I
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYA------AAIGTAKGLR 135
V G + + E++ SL + VL+ R +I KGL
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSL--------DQVLKKAGRIPEQILGKVSIAVIKGLT 145
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPE 195
+L E+ + I+HRD++PSNIL+ L DFG++ D + +GT Y++PE
Sbjct: 146 YLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTRSYMSPE 200
Query: 196 YAENGIVSIRTDVYAFGIILLQLMSGR 222
+ S+++D+++ G+ L+++ GR
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 14/198 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAKV--RKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
LG+G F V + ++ GQ AAK+ K+ S + + + E + +H NIV L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLR-FLHEECRGGPI 146
+E + L+++ + L F++ + E++ A+ + L LH C +
Sbjct: 90 ISEEGHHYLIFDLVTGGEL----FEDIVA-REYYSEADASHCIQQILEAVLH--CHQMGV 142
Query: 147 IHRDMRPSNILLTHDF---VPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVS 203
+HRD++P N+LL L DFGLA + GT GYL+PE
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 202
Query: 204 IRTDVYAFGIILLQLMSG 221
D++A G+IL L+ G
Sbjct: 203 KPVDLWACGVILYILLVG 220
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 10/199 (5%)
Query: 31 LGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQ---SEVYVLNFARHKNIVMLLG 86
+G G +G K K DG+++ K S AE Q SEV +L +H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 87 FCCKENLNIL--VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGT--AKGLRFLHEECR 142
L V EY L + T+ + + + T L+ H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 143 GG-PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
GG ++HRD++P+N+ L LGDFGLAR D+ + +GT Y++PE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMS 192
Query: 202 VSIRTDVYAFGIILLQLMS 220
+ ++D+++ G +L +L +
Sbjct: 193 YNEKSDIWSLGCLLYELCA 211
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNI 81
DF K + LG G G V+K K ++ A+ + E + E+ VL+ I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYA------AAIGTAKGLR 135
V G + + E++ SL + VL+ R +I KGL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSL--------DQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPE 195
+L E+ + I+HRD++PSNIL+ L DFG++ D + +GT Y++PE
Sbjct: 119 YLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTRSYMSPE 173
Query: 196 YAENGIVSIRTDVYAFGIILLQLMSGR 222
+ S+++D+++ G+ L+++ GR
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 123
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 124 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNI 81
DF K + LG G G V+K K ++ A+ + E + E+ VL+ I
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYA------AAIGTAKGLR 135
V G + + E++ SL + VL+ R +I KGL
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSL--------DQVLKKAGRIPEQILGKVSIAVIKGLT 121
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPE 195
+L E+ + I+HRD++PSNIL+ L DFG++ D + + +GT Y++PE
Sbjct: 122 YLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DEMANEFVGTRSYMSPE 176
Query: 196 YAENGIVSIRTDVYAFGIILLQLMSGR 222
+ S+++D+++ G+ L+++ GR
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNI 81
DF K + LG G G V+K K ++ A+ + E + E+ VL+ I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYA------AAIGTAKGLR 135
V G + + E++ SL + VL+ R +I KGL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSL--------DQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPE 195
+L E+ + I+HRD++PSNIL+ L DFG++ D + +GT Y++PE
Sbjct: 119 YLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTRSYMSPE 173
Query: 196 YAENGIVSIRTDVYAFGIILLQLMSGR 222
+ S+++D+++ G+ L+++ GR
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNI 81
DF K + LG G G V+K K ++ A+ + E + E+ VL+ I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYA------AAIGTAKGLR 135
V G + + E++ SL + VL+ R +I KGL
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSL--------DQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPE 195
+L E+ + I+HRD++PSNIL+ L DFG++ D + +GT Y++PE
Sbjct: 119 YLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTRSYMSPE 173
Query: 196 YAENGIVSIRTDVYAFGIILLQLMSGR 222
+ S+++D+++ G+ L+++ GR
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 16/197 (8%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVML-LGFC 88
LG G FG V++ E + AK K T + E+ +LN ARH+NI+ L F
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL-VKKEISILNIARHRNILHLHESFE 71
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEECRGGPI 146
E L ++++E+I + + NT S E ++R + + L+FLH G
Sbjct: 72 SMEEL-VMIFEFISGLDIFERI--NT-SAFELNEREIVSYVHQVCEALQFLHSHNIG--- 124
Query: 147 IHRDMRPSNILLT--HDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
H D+RP NI+ + +FG AR D + + Y APE ++ +VS
Sbjct: 125 -HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL-LFTAPEYYAPEVHQHDVVST 182
Query: 205 RTDVYAFGIILLQLMSG 221
TD+++ G ++ L+SG
Sbjct: 183 ATDMWSLGTLVYVLLSG 199
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 31 LGEGGFGHVYKGE-LKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCC 89
LGEGGF +V E L DG A K Q E Q E + H NI+ L+ +C
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 90 KE----NLNILVYEYICNKSLHWHLFDNTE---SVLEWHQRYAAAIGTAKGLRFLHEECR 142
+E + L+ + +L W+ + + + L Q +G +GL +H +
Sbjct: 97 RERGAKHEAWLLLPFFKRGTL-WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGY 155
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG---------TLGYLA 193
HRD++P+NILL + P+L D G + L T+ Y A
Sbjct: 156 A----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 194 PE---YAENGIVSIRTDVYAFGIILLQLMSGRKVVDM 227
PE + ++ RTDV++ G +L +M G DM
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNI 81
DF K + LG G G V+K K ++ A+ + E + E+ VL+ I
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYA------AAIGTAKGLR 135
V G + + E++ SL + VL+ R +I KGL
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSL--------DQVLKKAGRIPEQILGKVSIAVIKGLT 137
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPE 195
+L E+ + I+HRD++PSNIL+ L DFG++ D + +GT Y++PE
Sbjct: 138 YLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDSMANSFVGTRSYMSPE 192
Query: 196 YAENGIVSIRTDVYAFGIILLQLMSGR 222
+ S+++D+++ G+ L+++ GR
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 31 LGEGGFGHVYKGELK------DGQMIAAKVRKE-ASTQGFAEFQSEVYVLNFARHKNIVM 83
LG G FG VY+G++ +A K E S Q +F E +++ H+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLH 138
+G + ++ E + L L + + S L A A G ++L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 139 EECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
E IHRD+ N LLT V +GDFG+AR ++ + + + ++
Sbjct: 159 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMS 220
PE GI + +TD ++FG++L ++ S
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 31 LGEGGFGHVYKG--ELKDGQM-IAAKVRKEASTQG-FAEFQSEVYVLNFARHKNIVMLLG 86
LG G FG V +G ++ Q+ +A KV K+ + + E E +++ + IV L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLE------WHQRYAAAIGTAKGLRFLHEE 140
C E L +LV E LH L E + HQ + G+++L E+
Sbjct: 78 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ-------VSMGMKYLEEK 129
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG---TLGYLAPEYA 197
+HRD+ N+LL + + DFGL++ DD T L + APE
Sbjct: 130 ----NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 185
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
S R+DV+++G+ + + +S
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALS 208
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 31 LGEGGFGHVYKGELK------DGQMIAAKVRKE-ASTQGFAEFQSEVYVLNFARHKNIVM 83
LG G FG VY+G++ +A K E S Q +F E +++ H+NIV
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLH 138
+G + ++ E + L L + + S L A A G ++L
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 139 EECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
E IHRD+ N LLT V +GDFG+AR ++ + + + ++
Sbjct: 185 E----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMS 220
PE GI + +TD ++FG++L ++ S
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 118/295 (40%), Gaps = 49/295 (16%)
Query: 24 DFSKENLLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNI 81
D+ + ++G G V K ++ ++ E E E+ ++ H NI
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 82 VML-LGFCCKENLNIL-----------VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIG 129
V F K+ L ++ + ++I K H VL+
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH------KSGVLDESTIATILRE 129
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW-----KTTDDPVQTK 184
+GL +LH+ + IHRD++ NILL D + DFG++ + T + V+
Sbjct: 130 VLEGLEYLHKNGQ----IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 185 ILGTLGYLAPEYAENGI-VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPL 243
+GT ++APE E + D+++FGI ++L +G P P
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG--------AAPYHKY-----PP 232
Query: 244 IEKLALHELIDP-RIENSYDTYELY-----LMAKTAYLCVQRNPEGRPSMGEVVR 292
++ L L DP +E E+ K LC+Q++PE RP+ E++R
Sbjct: 233 MKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXIN 58
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 115 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMXGT 169
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 219
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 16/211 (7%)
Query: 30 LLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQS---EVYVLNFARHKNIVMLL 85
+LG GGFG V+ ++K G++ A K + + +Q E +L + IV L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 86 -GFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQR----YAAAIGTAKGLRFLHEE 140
F K +L LV + + +H+++ E + + Y A I GL LH+
Sbjct: 252 YAFETKTDL-CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI--VSGLEHLHQR 308
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENG 200
II+RD++P N+LL D + D GLA GT G++APE
Sbjct: 309 N----IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 201 IVSIRTDVYAFGIILLQLMSGRKVVDMNGEE 231
D +A G+ L ++++ R GE+
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 31 LGEGGFGHVYKGELK------DGQMIAAKVRKE-ASTQGFAEFQSEVYVLNFARHKNIVM 83
LG G FG VY+G++ +A K E S Q +F E +++ H+NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLH 138
+G + ++ E + L L + + S L A A G ++L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 139 EECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
E IHRD+ N LLT V +GDFG+AR ++ + + + ++
Sbjct: 173 EN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMS 220
PE GI + +TD ++FG++L ++ S
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXIN 58
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 115 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 169
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 219
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 59
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 116 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 170
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 220
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 116/282 (41%), Gaps = 36/282 (12%)
Query: 31 LGEGGFGHVYKGELK------DGQMIAAKVRKE-ASTQGFAEFQSEVYVLNFARHKNIVM 83
LG G FG VY+G++ +A K E S Q +F E +++ H+NIV
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLH 138
+G + ++ E + L L + + S L A A G ++L
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 139 EECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
E IHRD+ N LLT V +GDFG+AR ++ + + + ++
Sbjct: 165 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE GI + +TD ++FG++L ++ S G P S + + ++E + +
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPS--KSNQEVLEFVTSGGRM 271
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
DP Y + C Q PE RP+ ++ +E
Sbjct: 272 DPPKNCPGPVYRIMTQ------CWQHQPEDRPNFAIILERIE 307
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 17/237 (7%)
Query: 5 LYMKDPMKFSFSEIQQATGD-FSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQG 62
LY +++ + E Q D F +LG GGFG V+ ++K G++ A K + +
Sbjct: 166 LYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK 225
Query: 63 FAEFQS---EVYVLNFARHKNIVMLL-GFCCKENLNILVYEYICNKSLHWHLFDNTESVL 118
+Q E +L + IV L F K +L LV + + +H+++ E
Sbjct: 226 RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 119 EWHQR----YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW 174
+ + Y A I GL LH+ II+RD++P N+LL D + D GLA
Sbjct: 285 GFQEPRAIFYTAQI--VSGLEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Query: 175 KTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEE 231
GT G++APE D +A G+ L ++++ R GE+
Sbjct: 339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 17/237 (7%)
Query: 5 LYMKDPMKFSFSEIQQATGD-FSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQG 62
LY +++ + E Q D F +LG GGFG V+ ++K G++ A K + +
Sbjct: 166 LYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK 225
Query: 63 FAEFQS---EVYVLNFARHKNIVMLL-GFCCKENLNILVYEYICNKSLHWHLFDNTESVL 118
+Q E +L + IV L F K +L LV + + +H+++ E
Sbjct: 226 RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 119 EWHQR----YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW 174
+ + Y A I GL LH+ II+RD++P N+LL D + D GLA
Sbjct: 285 GFQEPRAIFYTAQI--VSGLEHLHQR----NIIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Query: 175 KTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEE 231
GT G++APE D +A G+ L ++++ R GE+
Sbjct: 339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 17/237 (7%)
Query: 5 LYMKDPMKFSFSEIQQATGD-FSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQG 62
LY +++ + E Q D F +LG GGFG V+ ++K G++ A K + +
Sbjct: 166 LYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK 225
Query: 63 FAEFQS---EVYVLNFARHKNIVMLL-GFCCKENLNILVYEYICNKSLHWHLFDNTESVL 118
+Q E +L + IV L F K +L LV + + +H+++ E
Sbjct: 226 RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 119 EWHQR----YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW 174
+ + Y A I GL LH+ II+RD++P N+LL D + D GLA
Sbjct: 285 GFQEPRAIFYTAQI--VSGLEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Query: 175 KTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEE 231
GT G++APE D +A G+ L ++++ R GE+
Sbjct: 339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNI 81
DF + + LG G G V K + + +I A+ + E + E+ VL+ I
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYA------AAIGTAKGLR 135
V G + + E++ SL + VL+ +R +I +GL
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSL--------DQVLKEAKRIPEEILGKVSIAVLRGLA 128
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPE 195
+L E+ + I+HRD++PSNIL+ L DFG++ D + +GT Y+APE
Sbjct: 129 YLREKHQ---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTRSYMAPE 183
Query: 196 YAENGIVSIRTDVYAFGIILLQLMSGR 222
+ S+++D+++ G+ L++L GR
Sbjct: 184 RLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 31 LGEGGFGHVYKGELK------DGQMIAAKVRKE-ASTQGFAEFQSEVYVLNFARHKNIVM 83
LG G FG VY+G++ +A K E S Q +F E +++ H+NIV
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLH 138
+G + ++ E + L L + + S L A A G ++L
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 139 EECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
E IHRD+ N LLT V +GDFG+AR ++ + + + ++
Sbjct: 175 E----NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMS 220
PE GI + +TD ++FG++L ++ S
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 63/304 (20%)
Query: 31 LGEGGFGHV--YKGELKD---GQMIAAKVRK-EASTQGFAEFQSEVYVLNFARHKNIVML 84
LGEG FG V Y + + G+M+A K K +A Q + ++ E+ +L H++I+
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 85 LGFCCKENLNI---LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
G CC++ LV EY+ SL +L ++ IG A+ L F + C
Sbjct: 99 KG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHS-------------IGLAQLLLFAQQIC 144
Query: 142 RGGPI------IHRDMRPSNILLTHDFVPMLGDFGLARW-----------KTTDDPVQTK 184
G IHRD+ N+LL +D + +GDFGLA+ + D PV
Sbjct: 145 EGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV--- 201
Query: 185 ILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR--QWAEP 242
+ APE + +DV++FG+ L +L++ D + P + L A+
Sbjct: 202 -----FWYAPECLKEYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIAQG 253
Query: 243 LIEKLALHELID-----PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
+ L L EL++ PR + E+Y + K C + RP+ ++ +L+
Sbjct: 254 QMTVLRLTELLERGERLPRPDKC--PAEVYHLMKN---CWETEASFRPTFENLIPILKTV 308
Query: 298 NDRF 301
++++
Sbjct: 309 HEKY 312
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 118/295 (40%), Gaps = 49/295 (16%)
Query: 24 DFSKENLLGEGGFGHVYKGEL--KDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNI 81
D+ + ++G G V K ++ ++ E E E+ ++ H NI
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 82 VML-LGFCCKENLNIL-----------VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIG 129
V F K+ L ++ + ++I K H VL+
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH------KSGVLDESTIATILRE 124
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW-----KTTDDPVQTK 184
+GL +LH+ + IHRD++ NILL D + DFG++ + T + V+
Sbjct: 125 VLEGLEYLHKNGQ----IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 185 ILGTLGYLAPEYAENGI-VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPL 243
+GT ++APE E + D+++FGI ++L +G P P
Sbjct: 181 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG--------AAPYHKY-----PP 227
Query: 244 IEKLALHELIDP-RIENSYDTYELY-----LMAKTAYLCVQRNPEGRPSMGEVVR 292
++ L L DP +E E+ K LC+Q++PE RP+ E++R
Sbjct: 228 MKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXIN 59
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 116 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMXGT 170
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 220
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 115 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 169
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 219
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 6 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 57
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 58 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 113
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 114 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 168
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 218
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 116/282 (41%), Gaps = 36/282 (12%)
Query: 31 LGEGGFGHVYKGELK------DGQMIAAKVRKE-ASTQGFAEFQSEVYVLNFARHKNIVM 83
LG G FG VY+G++ +A K E S Q +F E +++ H+NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLH 138
+G + ++ E + L L + + S L A A G ++L
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 139 EECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
E IHRD+ N LLT V +GDFG+AR ++ + + + ++
Sbjct: 173 EN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE GI + +TD ++FG++L ++ S G P S + + ++E + +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPS--KSNQEVLEFVTSGGRM 279
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
DP Y + C Q PE RP+ ++ +E
Sbjct: 280 DPPKNCPGPVYRIMTQ------CWQHQPEDRPNFAIILERIE 315
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 115 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 169
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 219
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 115 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 169
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 219
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 31 LGEGGFGHVYKGELK------DGQMIAAKVRKE-ASTQGFAEFQSEVYVLNFARHKNIVM 83
LG G FG VY+G++ +A K E S Q +F E +++ H+NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLH 138
+G + ++ E + L L + + S L A A G ++L
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 139 EECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
E IHRD+ N LLT V +GDFG+AR ++ + + + ++
Sbjct: 158 EN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMS 220
PE GI + +TD ++FG++L ++ S
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 115 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 169
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 219
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 59
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 116 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 170
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 220
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 59
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 116 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 170
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 220
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 59
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 116 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 170
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 220
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 116/282 (41%), Gaps = 36/282 (12%)
Query: 31 LGEGGFGHVYKGELK------DGQMIAAKVRKE-ASTQGFAEFQSEVYVLNFARHKNIVM 83
LG G FG VY+G++ +A K E S Q +F E +++ H+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLH 138
+G + ++ E + L L + + S L A A G ++L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 139 EECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
E IHRD+ N LLT V +GDFG+AR ++ + + + ++
Sbjct: 159 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE GI + +TD ++FG++L ++ S G P S + + ++E + +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPS--KSNQEVLEFVTSGGRM 265
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
DP Y + C Q PE RP+ ++ +E
Sbjct: 266 DPPKNCPGPVYRIMTQ------CWQHQPEDRPNFAIILERIE 301
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 78 HKNIVMLLGFCCKENLNILVYEYICNKSLHW--HLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + +++ L + DN S +L W + AKG
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 131 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 31 LGEGGFGHVYKGELK------DGQMIAAKVRKE-ASTQGFAEFQSEVYVLNFARHKNIVM 83
LG G FG VY+G++ +A K E S Q +F E +++ H+NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLH 138
+G + ++ E + L L + + S L A A G ++L
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 139 EECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
E IHRD+ N LLT V +GDFG+AR ++ + + + ++
Sbjct: 158 EN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMS 220
PE GI + +TD ++FG++L ++ S
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 59
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 116 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 170
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 220
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 115 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 169
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 219
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQ-MIAAKVRKEASTQGFAEFQS---EVYVLNFARHK 79
DF+ +LG+G FG V + K + + A K+ K+ + + E VL
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 80 NIVMLLGFCCKENLNI-LVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIGTAKG 133
+ L C + + V EY+ L +H+ F ++V YAA I G
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF-----YAAEISI--G 132
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLA 193
L FLH+ RG II+RD++ N++L + + DFG+ + D + GT Y+A
Sbjct: 133 LFFLHK--RG--IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIA 188
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEE 231
PE D +A+G++L ++++G+ D E+
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 226
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 116/282 (41%), Gaps = 36/282 (12%)
Query: 31 LGEGGFGHVYKGELK------DGQMIAAKVRKE-ASTQGFAEFQSEVYVLNFARHKNIVM 83
LG G FG VY+G++ +A K E S Q +F E +++ H+NIV
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLH 138
+G + ++ E + L L + + S L A A G ++L
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 139 EECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
E IHRD+ N LLT V +GDFG+AR ++ + + + ++
Sbjct: 150 EN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE GI + +TD ++FG++L ++ S G P S + + ++E + +
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPS--KSNQEVLEFVTSGGRM 256
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
DP Y + C Q PE RP+ ++ +E
Sbjct: 257 DPPKNCPGPVYRIMTQ------CWQHQPEDRPNFAIILERIE 292
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 115 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMXGT 169
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSXQEYSD 219
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 116/282 (41%), Gaps = 36/282 (12%)
Query: 31 LGEGGFGHVYKGELK------DGQMIAAKVRKEA-STQGFAEFQSEVYVLNFARHKNIVM 83
LG G FG VY+G++ +A K E S Q +F E +++ H+NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLH 138
+G + ++ E + L L + + S L A A G ++L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 139 EECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
E IHRD+ N LLT V +GDFG+AR ++ + + + ++
Sbjct: 173 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE GI + +TD ++FG++L ++ S G P S + + ++E + +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPS--KSNQEVLEFVTSGGRM 279
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
DP Y + C Q PE RP+ ++ +E
Sbjct: 280 DPPKNCPGPVYRIMTQ------CWQHQPEDRPNFAIILERIE 315
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 137 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE S +D++A G I+ QL++G +K++ +
Sbjct: 191 ANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 250
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 251 YDFPEKFFPK-ARDLVEKL 268
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 115 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMXGT 169
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 219
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 122/304 (40%), Gaps = 37/304 (12%)
Query: 1 MKTELYMKDPMKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELK--DGQMIAAKVR--- 55
M L + D +K ++ F+ +LG+G FG V + +LK DG + V+
Sbjct: 1 MLDSLGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK 60
Query: 56 -KEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCKEN------LNILVYEYICNKSLHW 108
++ EF E + H ++ L+G + + +++ ++ + LH
Sbjct: 61 ADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHA 120
Query: 109 HLFDN----TESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVP 164
L + L + A G+ +L IHRD+ N +L D
Sbjct: 121 FLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR----NFIHRDLAARNCMLAEDMTV 176
Query: 165 MLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVSIRTDVYAFGIILLQLMSGR 222
+ DFGL+R + D + L +LA E + + ++ +DV+AFG+ + ++M+
Sbjct: 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT-- 234
Query: 223 KVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPE 282
G+ P + AE + + L P E + Y+L Y C +P+
Sbjct: 235 -----RGQTPYAGIEN-AEIYNYLIGGNRLKQPP-ECMEEVYDLM------YQCWSADPK 281
Query: 283 GRPS 286
RPS
Sbjct: 282 QRPS 285
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 115 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMXGT 169
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 219
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 31 LGEGGFGHVYKGELK-DGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K K G+ AAK R +S +G + E + EV +L RH NI+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + +L+ E + L L + + ++ I G+ +LH +
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYLHSKR-- 128
Query: 144 GPIIHRDMRPSNILLTHDFVP----MLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP L DFG+A + + I GT ++APE
Sbjct: 129 --IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN-IFGTPEFVAPEIVNY 185
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSL 236
+ + D+++ G+I L+SG GE Q++L
Sbjct: 186 EPLGLEADMWSIGVITYILLSG--ASPFLGETKQETL 220
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 31 LGEGGFGHVYKGELK-DGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K K G+ AAK R +S +G + E + EV +L RH NI+
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + +L+ E + L L + + ++ I G+ +LH +
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYLHSKR-- 135
Query: 144 GPIIHRDMRPSNILLTHDFVP----MLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP L DFG+A + + I GT ++APE
Sbjct: 136 --IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN-IFGTPEFVAPEIVNY 192
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSL 236
+ + D+++ G+I L+SG GE Q++L
Sbjct: 193 EPLGLEADMWSIGVITYILLSG--ASPFLGETKQETL 227
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 78 HKNIVMLLGFCCKENLNILVYEYICNKSLHW--HLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ L + DN S +L W + AKG
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 130 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 107/249 (42%), Gaps = 38/249 (15%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV---RKEASTQGFAEFQSEVYVLNFARHK 79
DF +LGEG F V EL + A K+ R E V++ H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 80 NIVMLLGFCCKENLNILV-YEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIGTAKG 133
V L FC +++ + Y N L ++ FD T + + Y A I +A
Sbjct: 98 FFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----RFYTAEIVSA-- 149
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PVQTKILGTLGY 191
L +LH G IIHRD++P NILL D + DFG A+ + + +GT Y
Sbjct: 150 LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMNGEEPQQSLRQ 238
++PE +D++A G I+ QL++G +K++ + + P++ +
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 265
Query: 239 WAEPLIEKL 247
A L+EKL
Sbjct: 266 -ARDLVEKL 273
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 10/199 (5%)
Query: 31 LGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQ---SEVYVLNFARHKNIVMLLG 86
+G G +G K K DG+++ K S AE Q SEV +L +H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 87 FCCKENLNIL--VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGT--AKGLRFLHEECR 142
L V EY L + T+ + + + T L+ H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 143 GG-PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
GG ++HRD++P+N+ L LGDFGLAR D +GT Y++PE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMS 192
Query: 202 VSIRTDVYAFGIILLQLMS 220
+ ++D+++ G +L +L +
Sbjct: 193 YNEKSDIWSLGCLLYELCA 211
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 59
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 116 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 170
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 220
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 30 LLGEGGFGHVYKG-ELKDGQMIAAK---VRKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
++G+G F V + + GQ A K V K S+ G + + + E + + +H +IV
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEEC 141
LL + + +V+E++ L + + ++ + + A+ + LR+ H+
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD-- 148
Query: 142 RGGPIIHRDMRPSNILLT--HDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
IIHRD++P +LL + P+ LG FG+A V +GT ++APE +
Sbjct: 149 --NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 206
Query: 199 NGIVSIRTDVYAFGIILLQLMSG 221
DV+ G+IL L+SG
Sbjct: 207 REPYGKPVDVWGCGVILFILLSG 229
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 10/199 (5%)
Query: 31 LGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQ---SEVYVLNFARHKNIVMLLG 86
+G G +G K K DG+++ K S AE Q SEV +L +H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 87 FCCKENLNIL--VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGT--AKGLRFLHEECR 142
L V EY L + T+ + + + T L+ H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 143 GG-PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
GG ++HRD++P+N+ L LGDFGLAR D +GT Y++PE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMS 192
Query: 202 VSIRTDVYAFGIILLQLMS 220
+ ++D+++ G +L +L +
Sbjct: 193 YNEKSDIWSLGCLLYELCA 211
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 29/266 (10%)
Query: 29 NLLGEGGFGHVYKGELKDG----QMIAAKVRKEAS--TQGFAEFQSEVYVLNFARHKNIV 82
+LG+G FG V+ + G Q+ A KV K+A+ + + E +L H IV
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
L E L+ +++ L L E + Y A + A L LH
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA--LDHLHSLG- 146
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIV 202
II+RD++P NILL + L DFGL++ + GT+ Y+APE
Sbjct: 147 ---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 203 SIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYD 262
+ D ++FG+++ ++++G + G++ ++++ L KL + + + P ++
Sbjct: 204 TQSADWWSFGVLMFEMLTG--TLPFQGKDRKETMTMI---LKAKLGMPQFLSPEAQS--- 255
Query: 263 TYELYLMAKTAYLCVQRNPEGRPSMG 288
+ +RNP R G
Sbjct: 256 ---------LLRMLFKRNPANRLGAG 272
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 115 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 169
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 219
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG +G V Q+ +V +EA + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 59
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 60 AMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 116 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 170
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 220
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI-- 185
I A+ + FLH + ++HRD++PSNI T D V +GDFGL D+ QT +
Sbjct: 171 IQIAEAVEFLHSKG----LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226
Query: 186 ----------LGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLM 219
+GT Y++PE S + D+++ G+IL +L+
Sbjct: 227 MPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILG 187
A+G+ FL IHRD+ NILL+ + V + DFGLAR +K D +
Sbjct: 208 VARGMEFLSSR----KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKL 247
L ++APE + I S ++DV+++G++L ++ S G P + Q E +
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS-------LGGSPYPGV-QMDEDFCSR- 314
Query: 248 ALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLL 294
L E + R Y T E+Y + C R+P+ RP E+V L
Sbjct: 315 -LREGMRMRAPE-YSTPEIY---QIMLDCWHRDPKERPRFAELVEKL 356
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 24 DFSKENL-----LGEGGFGHVYKGEL------KDGQMIAAKVRKEASTQG-FAEFQSEVY 71
+F++E L LG G FG V + + +A K+ KE +T + +E+
Sbjct: 23 EFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELK 82
Query: 72 VLN-FARHKNIVMLLGFCCKENLNILVYEYICN 103
+L H N+V LLG C K+ ++V C
Sbjct: 83 ILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCK 115
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 30 LLGEGGFGHVYKG-ELKDGQMIAAK---VRKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
++G+G F V + + GQ A K V K S+ G + + + E + + +H +IV
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEEC 141
LL + + +V+E++ L + + ++ + + A+ + LR+ H+
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN- 151
Query: 142 RGGPIIHRDMRPSNILLT--HDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
IIHRD++P +LL + P+ LG FG+A V +GT ++APE +
Sbjct: 152 ---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 208
Query: 199 NGIVSIRTDVYAFGIILLQLMSG 221
DV+ G+IL L+SG
Sbjct: 209 REPYGKPVDVWGCGVILFILLSG 231
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 20/217 (9%)
Query: 31 LGEGGFGHVYKGELK-DGQMIAAKVRKE----ASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K K G+ AAK K+ +S +G + E + EV +L RH NI+
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + +L+ E + L L + + ++ I G+ +LH +
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYLHSK--- 148
Query: 144 GPIIHRDMRPSNILLTHDFVP----MLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP L DFG+A + + I GT ++APE
Sbjct: 149 -RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN-IFGTPEFVAPEIVNY 206
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSL 236
+ + D+++ G+I L+SG GE Q++L
Sbjct: 207 EPLGLEADMWSIGVITYILLSG--ASPFLGETKQETL 241
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + A+G
Sbjct: 73 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEG 126
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 127 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 29/266 (10%)
Query: 29 NLLGEGGFGHVYKGELKDG----QMIAAKVRKEAS--TQGFAEFQSEVYVLNFARHKNIV 82
+LG+G FG V+ + G Q+ A KV K+A+ + + E +L H IV
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
L E L+ +++ L L E + Y A + A L LH
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA--LDHLHSLG- 146
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIV 202
II+RD++P NILL + L DFGL++ + GT+ Y+APE
Sbjct: 147 ---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 203 SIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYD 262
+ D ++FG+++ ++++G + G++ ++++ L KL + + + P ++
Sbjct: 204 TQSADWWSFGVLMFEMLTG--TLPFQGKDRKETMTMI---LKAKLGMPQFLSPEAQS--- 255
Query: 263 TYELYLMAKTAYLCVQRNPEGRPSMG 288
+ +RNP R G
Sbjct: 256 ---------LLRMLFKRNPANRLGAG 272
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 29/266 (10%)
Query: 29 NLLGEGGFGHVYKGELKDG----QMIAAKVRKEAS--TQGFAEFQSEVYVLNFARHKNIV 82
+LG+G FG V+ + G Q+ A KV K+A+ + + E +L H IV
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
L E L+ +++ L L E + Y A + A L LH
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA--LDHLHSLG- 147
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIV 202
II+RD++P NILL + L DFGL++ + GT+ Y+APE
Sbjct: 148 ---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 203 SIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYD 262
+ D ++FG+++ ++++G + G++ ++++ L KL + + + P ++
Sbjct: 205 TQSADWWSFGVLMFEMLTG--TLPFQGKDRKETMTMI---LKAKLGMPQFLSPEAQS--- 256
Query: 263 TYELYLMAKTAYLCVQRNPEGRPSMG 288
+ +RNP R G
Sbjct: 257 ---------LLRMLFKRNPANRLGAG 273
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 15/213 (7%)
Query: 16 SEIQQATGDFSKENLLGEGGFGHVYKGELKDGQMI-AAKVRKEASTQGFAE---FQSEVY 71
S DF ++G+G FG V K ++ A KV ++ + E SE
Sbjct: 31 SNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERN 90
Query: 72 VL-NFARHKNIVML-LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQR-YAAAI 128
VL +H +V L F + L V +YI L +HL LE R YAA I
Sbjct: 91 VLLKNVKHPFLVGLHFSFQTADKL-YFVLDYINGGELFYHL-QRERCFLEPRARFYAAEI 148
Query: 129 GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT 188
+A G +LH I++RD++P NILL +L DFGL + + + GT
Sbjct: 149 ASALG--YLHSLN----IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGT 202
Query: 189 LGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
YLAPE D + G +L +++ G
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +L G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 130 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNAMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 22 TGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKV--RKEASTQGFAEFQSEVYVLNFARH 78
T D+ LG+G F V + K Q AAK+ K+ S + + + E + +H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRF 136
NIV L +E + LV++ + L F++ + + + A+ + +
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIHQILESVNH 145
Query: 137 LHEECRGGPIIHRDMRPSNILLTHDF---VPMLGDFGLARWKTTDDPVQTKILGTLGYLA 193
+H+ I+HRD++P N+LL L DFGLA + GT GYL+
Sbjct: 146 IHQH----DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLS 201
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSG 221
PE D++A G+IL L+ G
Sbjct: 202 PEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFG A+ ++ G + +
Sbjct: 132 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKVRKE----ASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK K+ AS +G + E + EV +L H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L +L+ E + L + ES+ E + + G+ +LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL-FDFLAQKESLSE-EEATSFIKQILDGVNYLHTK--- 134
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTK-ILGTLGYLAPEYAE 198
I H D++P NI+L +P+ L DFGLA +D V+ K I GT ++APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 199 NGIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKVRKE----ASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK K+ AS +G E + EV +L H NI+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L +L+ E + L + ES+ E + + G+ +LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL-FDFLAQKESLSE-EEATSFIKQILDGVNYLHTK--- 134
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTK-ILGTLGYLAPEYAE 198
I H D++P NI+L +P+ L DFGLA +D V+ K I GT ++APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 199 NGIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT--TDDPV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 134 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 187
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 188 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 247
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 248 YDFPEKFFPK-ARDLVEKL 265
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 23 GDFSKENLLGEGGFGHVYKGELK-DGQMIAAKV---RKEASTQGFAEFQSEVYVLNFARH 78
G + + LG G FG V GE + G +A K+ +K S + + E+ L RH
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
+I+ L +V EY+ L ++ + +R I +A
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAV------ 124
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
+ C ++HRD++P N+LL + DFGL+ + + ++T G+ Y APE
Sbjct: 125 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS-CGSPNYAAPEVIS 183
Query: 199 NGIVS-IRTDVYAFGIILLQLMSG 221
+ + D+++ G+IL L+ G
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKVRKE----ASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK K+ AS +G + E + EV +L H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L +L+ E + L + ES+ E + + G+ +LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL-FDFLAQKESLSE-EEATSFIKQILDGVNYLHTK--- 134
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTK-ILGTLGYLAPEYAE 198
I H D++P NI+L +P+ L DFGLA +D V+ K I GT ++APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 199 NGIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFG A+ ++ G + +
Sbjct: 130 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 131/299 (43%), Gaps = 53/299 (17%)
Query: 31 LGEGGFGHV--YKGELKD---GQMIAAKVRKEAS-TQGFAEFQSEVYVLNFARHKNIVML 84
LGEG FG V Y + + G+M+A K KE Q + +Q E+ +L H++IV
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 85 LGFCCK---ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
G CC+ E LV EY+ SL +L + + Q A +G+ +LH +
Sbjct: 76 KG-CCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLA---QLLLFAQQICEGMAYLHAQ- 130
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW-----------KTTDDPVQTKILGTLG 190
IHR + N+LL +D + +GDFGLA+ + D PV
Sbjct: 131 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV--------F 179
Query: 191 YLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQW---AEPLIEKL 247
+ APE + +DV++FG+ L +L++ D N + P + + + L
Sbjct: 180 WYAPECLKECKFYYASDVWSFGVTLYELLT---YCDSN-QSPHTKFTELIGHTQGQMTVL 235
Query: 248 ALHELID-----PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDRF 301
L EL++ PR + E+Y + K C + RP+ +V +L+ +++
Sbjct: 236 RLTELLERGERLPRPDRC--PCEIYHLMKN---CWETEASFRPTFQNLVPILQTAQEKY 289
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 150
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 207
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 208 QTVDIWSVGCIMAELLTGRTL 228
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 154
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 211
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 212 QTVDIWSVGCIMAELLTGRTL 232
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 131/299 (43%), Gaps = 53/299 (17%)
Query: 31 LGEGGFGHV--YKGELKD---GQMIAAKVRKE-ASTQGFAEFQSEVYVLNFARHKNIVML 84
LGEG FG V Y + + G+M+A K KE Q + +Q E+ +L H++IV
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 85 LGFCCK---ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
G CC+ E LV EY+ SL +L + + Q A +G+ +LH +
Sbjct: 77 KG-CCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLA---QLLLFAQQICEGMAYLHAQ- 131
Query: 142 RGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW-----------KTTDDPVQTKILGTLG 190
IHR + N+LL +D + +GDFGLA+ + D PV
Sbjct: 132 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV--------F 180
Query: 191 YLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQW---AEPLIEKL 247
+ APE + +DV++FG+ L +L++ D N + P + + + L
Sbjct: 181 WYAPECLKECKFYYASDVWSFGVTLYELLT---YCDSN-QSPHTKFTELIGHTQGQMTVL 236
Query: 248 ALHELID-----PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDRF 301
L EL++ PR + E+Y + K C + RP+ +V +L+ +++
Sbjct: 237 RLTELLERGERLPRPDRC--PCEIYHLMKN---CWETEASFRPTFQNLVPILQTAQEKY 290
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKVRKE----ASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK K+ AS +G + E + EV +L H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L +L+ E + L + ES+ E + + G+ +LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL-FDFLAQKESLSE-EEATSFIKQILDGVNYLHTK--- 134
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTK-ILGTLGYLAPEYAE 198
I H D++P NI+L +P+ L DFGLA +D V+ K I GT ++APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 199 NGIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFG A+ ++ G + +
Sbjct: 132 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +L G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 83 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 137 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 88/209 (42%), Gaps = 15/209 (7%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGE-LKDGQMIAAKV--RKEASTQGFAEFQSEVYVLNF 75
Q G++ +G+G F V + G+ +A K+ + + ++ + EV ++
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLR 135
H NIV L E LV EY +FD L H R AK +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASG----GEVFD----YLVAHGRMKEKEARAKFRQ 121
Query: 136 FLH--EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLA 193
+ + C I+HRD++ N+LL D + DFG + T + + T G+ Y A
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPYAA 180
Query: 194 PE-YAENGIVSIRTDVYAFGIILLQLMSG 221
PE + DV++ G+IL L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFG A+ ++ G + +
Sbjct: 132 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 31 LGEGGFGHVYKGELK------DGQMIAAKVRKE-ASTQGFAEFQSEVYVLNFARHKNIVM 83
LG G FG VY+G++ +A K E S Q +F E +++ H+NIV
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLH 138
+G + ++ E + L L + + S L A A G ++L
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 139 EECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
E IHRD+ N LLT V +GDFG+AR ++ + + ++
Sbjct: 176 EN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMS 220
PE GI + +TD ++FG++L ++ S
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 134 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 187
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 188 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 247
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 248 YDFPEKFFPK-ARDLVEKL 265
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKVRKE----ASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK K+ AS +G + E + EV +L H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L +L+ E + L + ES+ E + + G+ +LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL-FDFLAQKESLSE-EEATSFIKQILDGVNYLHTK--- 134
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTK-ILGTLGYLAPEYAE 198
I H D++P NI+L +P+ L DFGLA +D V+ K I GT ++APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 199 NGIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 37/211 (17%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L D G ++A K + + +FQ E+ +L IV
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 86 GFC---CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G +++L LV EY+ + L ++ QR+ A + ++ L + + C+
Sbjct: 78 GVSYGPGRQSLR-LVMEYLPSGCLR-----------DFLQRHRARLDASRLLLYSSQICK 125
Query: 143 GGP------IIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G +HRD+ NIL+ + + DFGLA+ D +P Q+ I
Sbjct: 126 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF--- 182
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
+ APE + I S ++DV++FG++L +L +
Sbjct: 183 -WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 88/209 (42%), Gaps = 15/209 (7%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGE-LKDGQMIAAKV--RKEASTQGFAEFQSEVYVLNF 75
Q G++ +G+G F V + G+ +A K+ + + ++ + EV ++
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLR 135
H NIV L E LV EY +FD L H R AK +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASG----GEVFD----YLVAHGRMKEKEARAKFRQ 121
Query: 136 FLH--EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLA 193
+ + C I+HRD++ N+LL D + DFG + T + + T G+ Y A
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPYAA 180
Query: 194 PE-YAENGIVSIRTDVYAFGIILLQLMSG 221
PE + DV++ G+IL L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFG A+ ++ G + +
Sbjct: 137 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +L G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN S +L W + AKG
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFGLA+ ++ G + +
Sbjct: 137 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 163
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 220
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 221 QTVDIWSVGCIMAELLTGRTL 241
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 24 DFSKENLLGEGGFGHVYKG-ELKDGQMIAAKV-----RKEASTQGFAEFQSEVYVLNFAR 77
+F K +LG G FG VYKG + +G+ + V R+ S + E E YV+
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 78 HKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDN--TESVLEWHQRYAAAIGTAKG 133
+ ++ LLG C + ++ + + C DN ++ +L W + AKG
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG--TLGY 191
+ +L + ++HRD+ N+L+ + DFG A+ ++ G + +
Sbjct: 134 MNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMS-GRKVVD 226
+A E + I + ++DV+++G+ + +LM+ G K D
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 164
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 221
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 222 QTVDIWSVGCIMAELLTGRTL 242
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 31 LGEGGFGHVYKGELK------DGQMIAAKVRKE-ASTQGFAEFQSEVYVLNFARHKNIVM 83
LG G FG VY+G++ +A K E S Q +F E +++ H+NIV
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLH 138
+G + ++ E + L L + + S L A A G ++L
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 139 EECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
E IHRD+ N LLT V +GDFG+AR ++ + + ++
Sbjct: 199 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMS 220
PE GI + +TD ++FG++L ++ S
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 30 LLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQG--FAEFQSEVYVLNFARHKNIVMLLG 86
+LG+G FG V K + + Q A KV +AS + + EV +L H NI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEECRGG 144
+ +V E LFD + + AA I G+ ++H+
Sbjct: 89 ILEDSSSFYIVGELYTG----GELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---- 140
Query: 145 PIIHRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
I+HRD++P NILL D + DFGL+ + ++ +I GT Y+APE G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVL-RGT 198
Query: 202 VSIRTDVYAFGIILLQLMSG 221
+ DV++ G+IL L+SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKVRKE----ASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK K+ AS +G + E + EV +L H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L +L+ E + L + ES+ E + + G+ +LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL-FDFLAQKESLSE-EEATSFIKQILDGVNYLHTK--- 134
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTK-ILGTLGYLAPEYAE 198
I H D++P NI+L +P+ L DFGLA +D V+ K I GT ++APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 199 NGIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 119 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 172
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 173 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 232
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 233 YDFPEKFFPK-ARDLVEKL 250
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 37/211 (17%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L D G ++A K + + +FQ E+ +L IV
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 86 GFC---CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G +++L LV EY+ + L ++ QR+ A + ++ L + + C+
Sbjct: 79 GVSYGPGRQSLR-LVMEYLPSGCLR-----------DFLQRHRARLDASRLLLYSSQICK 126
Query: 143 GGP------IIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G +HRD+ NIL+ + + DFGLA+ D +P Q+ I
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF--- 183
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
+ APE + I S ++DV++FG++L +L +
Sbjct: 184 -WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 149
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 206
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 207 QTVDIWSVGCIMAELLTGRTL 227
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 31 LGEGGFGHVYKG--ELKDGQM-IAAKVRKEASTQG-FAEFQSEVYVLNFARHKNIVMLLG 86
LG G FG V +G ++ Q+ +A KV K+ + + E E +++ + IV L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLE------WHQRYAAAIGTAKGLRFLHEE 140
C E L +LV E LH L E + HQ + G+++L E+
Sbjct: 404 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ-------VSMGMKYLEEK 455
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG---TLGYLAPEYA 197
+HR++ N+LL + + DFGL++ DD T L + APE
Sbjct: 456 N----FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 511
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
S R+DV+++G+ + + +S
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 113 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 166
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 167 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 226
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 227 YDFPEKFFPK-ARDLVEKL 244
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 30 LLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQG--FAEFQSEVYVLNFARHKNIVMLLG 86
+LG+G FG V K + + Q A KV +AS + + EV +L H NI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEECRGG 144
+ +V E LFD + + AA I G+ ++H+
Sbjct: 89 ILEDSSSFYIVGELYTGG----ELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---- 140
Query: 145 PIIHRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
I+HRD++P NILL D + DFGL+ + ++ +I GT Y+APE G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVL-RGT 198
Query: 202 VSIRTDVYAFGIILLQLMSG 221
+ DV++ G+IL L+SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 112 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 165
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 166 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 225
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 226 YDFPEKFFPK-ARDLVEKL 243
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 29 NLLGEGGFGHVYKGELK-DGQMIAAKV---RKEASTQGFAEFQSEVYVLNFARHKNIVML 84
+ LG G FG V G+ + G +A K+ +K S + + E+ L RH +I+ L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 85 LGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
+ +V EY+ L ++ N + +R I + G+ + H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS--GVDYCHRHM--- 136
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVS- 203
++HRD++P N+LL + DFGL+ +D G+ Y APE + +
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNM-MSDGEFLRXSCGSPNYAAPEVISGRLYAG 194
Query: 204 IRTDVYAFGIILLQLMSG 221
D+++ G+IL L+ G
Sbjct: 195 PEVDIWSSGVILYALLCG 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 37/211 (17%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L D G ++A K + + +FQ E+ +L IV
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 86 GFC---CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G +++L LV EY+ + L ++ QR+ A + ++ L + + C+
Sbjct: 91 GVSYGPGRQSLR-LVMEYLPSGCLR-----------DFLQRHRARLDASRLLLYSSQICK 138
Query: 143 GGP------IIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G +HRD+ NIL+ + + DFGLA+ D +P Q+ I
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF--- 195
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
+ APE + I S ++DV++FG++L +L +
Sbjct: 196 -WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 140
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 197
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 198 QTVDIWSVGCIMAELLTGRTL 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 30 LLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQG--FAEFQSEVYVLNFARHKNIVMLLG 86
+LG+G FG V K + + Q A KV +AS + + EV +L H NI+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEECRGG 144
+ +V E LFD + + AA I G+ ++H+
Sbjct: 89 ILEDSSSFYIVGELYTGG----ELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---- 140
Query: 145 PIIHRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
I+HRD++P NILL D + DFGL+ + ++ +I GT Y+APE G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVL-RGT 198
Query: 202 VSIRTDVYAFGIILLQLMSG 221
+ DV++ G+IL L+SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 31 LGEGGFGHVYKG------------ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARH 78
+G G F VYKG EL+D ++ ++ ++ F+ E L +H
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR---------FKEEAEXLKGLQH 84
Query: 79 KNIVMLL----GFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGL 134
NIV + +LV E + +L +L ++ + + I KGL
Sbjct: 85 PNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI--LKGL 142
Query: 135 RFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYLA 193
+FLH R PIIHRD++ NI +T + +GD GLA K ++GT + A
Sbjct: 143 QFLH--TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--FAKAVIGTPEFXA 198
Query: 194 PE-YAENGIVSIRTDVYAFGIILLQLMSG 221
PE Y E S+ DVYAFG L+ +
Sbjct: 199 PEXYEEKYDESV--DVYAFGXCXLEXATS 225
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 114 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 167
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 168 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 227
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 228 YDFPEKFFPK-ARDLVEKL 245
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 37/234 (15%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAE----------FQSEVYVL 73
D+ LGEG G V Q+ +V +EA + + E+ +
Sbjct: 7 DWDLVQTLGEGAAGEV--------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 58
Query: 74 NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTA 131
H+N+V G + N+ L EY C+ LFD E + + A
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEY-CSGG---ELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA---RWKTTDDPVQTKILGT 188
G+ +LH G I HRD++P N+LL + DFGLA R+ + + K+ GT
Sbjct: 115 AGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-LLNKMCGT 169
Query: 189 LGYLAPEYAENGIVSIR-TDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAE 241
L Y+APE + DV++ GI+L +++G ++ ++P S +++++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----ELPWDQPSDSCQEYSD 219
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 55/289 (19%)
Query: 31 LGEGGFGHVYKG---ELKD-GQM----IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
LG+G F ++KG E+ D GQ+ + KV +A F +++ HK++V
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESV-LEWHQRYAAAIGTAKGLRFLHEEC 141
+ G C + NILV E++ SL +L N + + W A + A + FL E
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA--MHFLEENT 133
Query: 142 RGGPIIHRDMRPSNILLTHD---------FVPMLGDFGLARWKTTDDPVQTKILGTLGYL 192
+IH ++ NILL + F+ L D G++ D +Q +I ++
Sbjct: 134 ----LIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPKDILQERI----PWV 184
Query: 193 APEYAENGI-VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL-- 249
PE EN +++ TD ++FG L ++ SG G++P +L KL
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSG-------GDKPLSALDSQ-----RKLQFYE 232
Query: 250 --HELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEG 296
H+L P+ +A C+ P+ RPS ++R L
Sbjct: 233 DRHQLPAPKAAE---------LANLINNCMDYEPDHRPSFRAIIRDLNS 272
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 149
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 206
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 207 QTVDIWSVGCIMAELLTGRTL 227
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 116/282 (41%), Gaps = 36/282 (12%)
Query: 31 LGEGGFGHVYKGELK------DGQMIAAKVRKE-ASTQGFAEFQSEVYVLNFARHKNIVM 83
LG G FG VY+G++ +A K E S Q +F E +++ H+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFD-----NTESVLEWHQRYAAAIGTAKGLRFLH 138
+G + ++ E + L L + + S L A A G ++L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 139 EECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLAR--WKTTDDPVQTKILGTLGYLA 193
E IHRD+ N LLT V +GDFG+A+ ++ + + + ++
Sbjct: 159 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
PE GI + +TD ++FG++L ++ S G P S + + ++E + +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPS--KSNQEVLEFVTSGGRM 265
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLE 295
DP Y + C Q PE RP+ ++ +E
Sbjct: 266 DPPKNCPGPVYRIMTQ------CWQHQPEDRPNFAIILERIE 301
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 155
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 156 DIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 212
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 213 QTVDIWSVGCIMAELLTGRTL 233
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 150
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 207
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 208 QTVDIWSVGCIMAELLTGRTL 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 135 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 248
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 249 YDFPEKFFPK-ARDLVEKL 266
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 138 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 191
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 192 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 251
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 252 YDFPEKFFPK-ARDLVEKL 269
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 151
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 208
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTL 229
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 135 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 248
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 249 YDFPEKFFPK-ARDLVEKL 266
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 135 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 189 ANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 248
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 249 YDFPEKFFPK-ARDLVEKL 266
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 149
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 206
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 207 QTVDIWSVGCIMAELLTGRTL 227
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 143
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 144 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 200
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 201 QTVDIWSVGCIMAELLTGRTL 221
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 150
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 207
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 208 QTVDIWSVGCIMAELLTGRTL 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 135 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 248
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 249 YDFPEKFFPK-ARDLVEKL 266
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 137 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 250
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 251 YDFPEKFFPK-ARDLVEKL 268
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 115 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 168
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 169 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 228
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 229 YDFPEKFFPK-ARDLVEKL 246
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 137 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 250
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 251 YDFPEKFFPK-ARDLVEKL 268
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 146
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 203
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 204 QTVDIWSVGCIMAELLTGRTL 224
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 155
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 156 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 212
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 213 QTVDIWSVGCIMAELLTGRTL 233
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGXVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 156
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 213
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 214 QTVDIWSVGCIMAELLTGRTL 234
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 156
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 213
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 214 QTVDIWSVGCIMAELLTGRTL 234
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 138 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 191
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 192 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 251
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 252 YDFPEKFFPK-ARDLVEKL 269
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 15/209 (7%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGE-LKDGQMIAAKV--RKEASTQGFAEFQSEVYVLNF 75
Q G++ +G+G F V + G+ +A ++ + + ++ + EV ++
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLR 135
H NIV L E LV EY +FD L H R AK +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASG----GEVFD----YLVAHGRMKEKEARAKFRQ 121
Query: 136 FLH--EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLA 193
+ + C I+HRD++ N+LL D + DFG + T + + T G+ Y A
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPYAA 180
Query: 194 PE-YAENGIVSIRTDVYAFGIILLQLMSG 221
PE + DV++ G+IL L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 146
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 147 DIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 203
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 204 QTVDIWSVGCIMAELLTGRTL 224
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 146
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 203
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 204 QTVDIWSVGCIMAELLTGRTL 224
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 146
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 203
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 204 QTVDIWSVGCIMAELLTGRTL 224
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 137 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG-------------RKVVDMN 228
+GT Y++PE +D++A G I+ QL++G +K++ +
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 250
Query: 229 GEEPQQSLRQWAEPLIEKL 247
+ P++ + A L+EKL
Sbjct: 251 YDFPEKFFPK-ARDLVEKL 268
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 150
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 151 DIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 207
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 208 QTVDIWSVGCIMAELLTGRTL 228
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 149
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 206
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 207 QTVDIWSVGCIMAELLTGRTL 227
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 63/304 (20%)
Query: 31 LGEGGFGHV--YKGELKD---GQMIAAKVRK-EASTQGFAEFQSEVYVLNFARHKNIVML 84
LGEG FG V Y + + G+M+A K K + Q + ++ E+ +L H++I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 85 LGFCCK---ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
G CC+ E LV EY+ SL +L ++ IG A+ L F + C
Sbjct: 82 KG-CCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-------------IGLAQLLLFAQQIC 127
Query: 142 RGGPI------IHRDMRPSNILLTHDFVPMLGDFGLARW-----------KTTDDPVQTK 184
G IHR++ N+LL +D + +GDFGLA+ + D PV
Sbjct: 128 EGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV--- 184
Query: 185 ILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR--QWAEP 242
+ APE + +DV++FG+ L +L++ D + P + L A+
Sbjct: 185 -----FWYAPECLKEYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIAQG 236
Query: 243 LIEKLALHELID-----PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
+ L L EL++ PR + E+Y + K C + RP+ ++ +L+
Sbjct: 237 QMTVLRLTELLERGERLPRPDKC--PCEVYHLMKN---CWETEASFRPTFENLIPILKTV 291
Query: 298 NDRF 301
++++
Sbjct: 292 HEKY 295
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 63/304 (20%)
Query: 31 LGEGGFGHV--YKGELKD---GQMIAAKVRK-EASTQGFAEFQSEVYVLNFARHKNIVML 84
LGEG FG V Y + + G+M+A K K + Q + ++ E+ +L H++I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 85 LGFCCK---ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEEC 141
G CC+ E LV EY+ SL +L ++ IG A+ L F + C
Sbjct: 82 KG-CCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-------------IGLAQLLLFAQQIC 127
Query: 142 RGGPI------IHRDMRPSNILLTHDFVPMLGDFGLARW-----------KTTDDPVQTK 184
G IHR++ N+LL +D + +GDFGLA+ + D PV
Sbjct: 128 EGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV--- 184
Query: 185 ILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR--QWAEP 242
+ APE + +DV++FG+ L +L++ D + P + L A+
Sbjct: 185 -----FWYAPECLKEYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIAQG 236
Query: 243 LIEKLALHELID-----PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGE 297
+ L L EL++ PR + E+Y + K C + RP+ ++ +L+
Sbjct: 237 QMTVLRLTELLERGERLPRPDKC--PCEVYHLMKN---CWETEASFRPTFENLIPILKTV 291
Query: 298 NDRF 301
++++
Sbjct: 292 HEKY 295
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 167
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 224
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 225 QTVDIWSVGCIMAELLTGRTL 245
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 164
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + + T Y APE N +
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXV-ATRWYRAPEIMLNWMHYN 221
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 222 QTVDIWSVGCIMAELLTGRTL 242
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 163
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 220
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 221 QTVDIWSVGCIMAELLTGRTL 241
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 164
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 221
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 222 QTVDIWSVGCIMAELLTGRTL 242
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 141
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 198
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 199 QTVDIWSVGCIMAELLTGRTL 219
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Query: 29 NLLGEGGFGHVY---KGELKD-GQMIAAKVRKEAS--TQGFAEFQSEVYVLNFARHKNIV 82
+LG+G FG V+ K D G + A KV K+A+ + + E +L H +V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
L E L+ +++ L L E + Y A + A GL LH
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL--ALGLDHLHSLG- 150
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIV 202
II+RD++P NILL + L DFGL++ + GT+ Y+APE
Sbjct: 151 ---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGH 207
Query: 203 SIRTDVYAFGIILLQLMSG 221
S D +++G+++ ++++G
Sbjct: 208 SHSADWWSYGVLMFEMLTG 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 18/224 (8%)
Query: 24 DFSKENLLGEGGFGHVY---KGELKD-GQMIAAKVRKEASTQGFAEF----QSEVYVLNF 75
+F +LG G +G V+ K D G++ A KV K+A+ A+ ++E VL
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 76 ARHKNIVMLLGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGL 134
R ++ L + + + L+ +YI L HL Q Y I A L
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA--L 172
Query: 135 RFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQT-KILGTLGYLA 193
LH+ II+RD++ NILL + +L DFGL++ D+ + GT+ Y+A
Sbjct: 173 EHLHKLG----IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMA 228
Query: 194 PEYAENGIV--SIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQS 235
P+ G D ++ G+++ +L++G ++GE+ Q+
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA 272
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 141
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 198
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 199 QTVDIWSVGCIMAELLTGRTL 219
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 142
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 143 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 199
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 200 QTVDIWSVGCIMAELLTGRTL 220
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 37/211 (17%)
Query: 31 LGEGGFGHV---YKGELKD--GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLL 85
LG+G FG V L D G ++A K + + +FQ E+ +L IV
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 86 GFC---CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
G + L LV EY+ + L ++ QR+ A + ++ L + + C+
Sbjct: 75 GVSYGPGRPELR-LVMEYLPSGCLR-----------DFLQRHRARLDASRLLLYSSQICK 122
Query: 143 GGP------IIHRDMRPSNILLTHDFVPMLGDFGLARWKTTD-------DPVQTKILGTL 189
G +HRD+ NIL+ + + DFGLA+ D +P Q+ I
Sbjct: 123 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF--- 179
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
+ APE + I S ++DV++FG++L +L +
Sbjct: 180 -WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-AGFVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 140
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 197
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 198 QTVDIWSVGCIMAELLTGRTL 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-AGFVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + H ++ +GL+++H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLI-YQILRGLKYIH----SA 140
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + T + T Y APE N +
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 197
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 198 QTVDIWSVGCIMAELLTGRTL 218
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILG 187
AKG+ FL IHRD+ NILL+ V + DFGLAR +K D +
Sbjct: 200 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEPLI 244
L ++APE + + +I++DV++FG++L ++ S G P ++ ++ L
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLK 308
Query: 245 EKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
E + Y T E+Y +T C P RP+ E+V
Sbjct: 309 EGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 345
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 83 MLLGFCCKENLNILVYEYICN 103
LLG C K ++V C
Sbjct: 88 NLLGACTKPGGPLMVIVEFCK 108
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILG 187
AKG+ FL IHRD+ NILL+ V + DFGLAR +K D +
Sbjct: 202 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEPLI 244
L ++APE + + +I++DV++FG++L ++ S G P ++ ++ L
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLK 310
Query: 245 EKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
E + Y T E+Y +T C P RP+ E+V
Sbjct: 311 EGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 347
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 83 MLLGFCCKENLNILVYEYICN 103
LLG C K ++V C
Sbjct: 90 NLLGACTKPGGPLMVIVEFCK 110
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 12/204 (5%)
Query: 23 GDFSKENLLGEGGFGHVYKGELK-DGQMIAAKV---RKEASTQGFAEFQSEVYVLNFARH 78
G + + LG G FG V GE + G +A K+ +K S + + E+ L RH
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
+I+ L +V EY+ L ++ + +R I +A
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAV------ 124
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAE 198
+ C ++HRD++P N+LL + DFGL+ +D G+ Y APE
Sbjct: 125 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM-MSDGEFLRDSCGSPNYAAPEVIS 183
Query: 199 NGIVS-IRTDVYAFGIILLQLMSG 221
+ + D+++ G+IL L+ G
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 137 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+GT Y++PE +D++A G I+ QL++G
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 140
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + + T Y APE N +
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-AGFVATRWYRAPEIMLNWMHYN 197
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 198 QTVDIWSVGCIMAELLTGRTL 218
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 137 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+GT Y++PE +D++A G I+ QL++G
Sbjct: 191 ANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGY 191
+GL+++H IIHRD++PSN+ + D + DFGLAR TDD + T + T Y
Sbjct: 148 RGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM-TGYVATRWY 200
Query: 192 LAPEYAENGIVSIRT-DVYAFGIILLQLMSGRKV 224
APE N + +T D+++ G I+ +L++GR +
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + ++ + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGL R TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 124 YAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD--PV 181
Y A I +A L +LH G IIHRD++P NILL D + DFG A+ + +
Sbjct: 140 YTAEIVSA--LEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 193
Query: 182 QTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+GT Y++PE +D++A G I+ QL++G
Sbjct: 194 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILG 187
AKG+ FL IHRD+ NILL+ V + DFGLAR +K D +
Sbjct: 207 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEPLI 244
L ++APE + + +I++DV++FG++L ++ S G P ++ ++ L
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLK 315
Query: 245 EKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
E + Y T E+Y +T C P RP+ E+V
Sbjct: 316 EGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 352
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 83 MLLGFCCKENLNILVYEYICN 103
LLG C K ++V C
Sbjct: 95 NLLGACTKPGGPLMVIVEFCK 115
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR--WKTTDDPVQTKILG 187
AKG+ FL IHRD+ NILL+ V + DFGLAR +K D +
Sbjct: 209 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 188 TLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR---QWAEPLI 244
L ++APE + + +I++DV++FG++L ++ S G P ++ ++ L
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLK 317
Query: 245 EKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
E + Y T E+Y +T C P RP+ E+V
Sbjct: 318 EGTRMR-------APDYTTPEMY---QTMLDCWHGEPSQRPTFSELV 354
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 31 LGEGGFGHVYKGE------LKDGQMIAAKVRKEASTQG-FAEFQSEVYVL-NFARHKNIV 82
LG G FG V + + + +A K+ KE +T SE+ +L + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 83 MLLGFCCKENLNILVYEYICN 103
LLG C K ++V C
Sbjct: 97 NLLGACTKPGGPLMVIVEFCK 117
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 15/212 (7%)
Query: 16 SEIQQATGDFSKENLLGEGGFGHVYKGE-LKDGQMIAAKV--RKEASTQGFAEFQSEVYV 72
S+ Q G++ +G+G F V + G+ +A K+ + + + + EV +
Sbjct: 5 SDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 64
Query: 73 LNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
+ H NIV L E L+ EY +FD L H R +K
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASG----GEVFD----YLVAHGRMKEKEARSK 116
Query: 133 GLRFLH--EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLG 190
+ + + C I+HRD++ N+LL D + DFG + T + T G+
Sbjct: 117 FRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT-FCGSPP 175
Query: 191 YLAPE-YAENGIVSIRTDVYAFGIILLQLMSG 221
Y APE + DV++ G+IL L+SG
Sbjct: 176 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAKV--RKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
LG+G F V + ++ GQ AA + K+ S + + + E + +H NIV L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLR-FLHEECRGGPI 146
+E + L+++ + L F++ + E++ A+ + L LH C +
Sbjct: 79 ISEEGHHYLIFDLVTGGEL----FEDIVA-REYYSEADASHCIQQILEAVLH--CHQMGV 131
Query: 147 IHRDMRPSNILLTHDF---VPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVS 203
+HR+++P N+LL L DFGLA + GT GYL+PE
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 191
Query: 204 IRTDVYAFGIILLQLMSG 221
D++A G+IL L+ G
Sbjct: 192 KPVDLWACGVILYILLVG 209
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 151
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR T D+ T + T Y APE N +
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE--MTGYVATRWYRAPEIMLNWMHYN 208
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTL 229
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 151
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR T D+ T + T Y APE N +
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE--MTGYVATRWYRAPEIMLNWMHYN 208
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTL 229
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + D+GLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQS---EVYVLNFARHK 79
DF+ +LG+G FG V E K ++ A K+ K+ + + E VL
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 80 NIVMLLGFCCKENLNI-LVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIGTAKG 133
+ L C + + V EY+ L +H+ F +V YAA I A G
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF-----YAAEI--AIG 133
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLA 193
L FL + II+RD++ N++L + + DFG+ + D GT Y+A
Sbjct: 134 LFFLQSKG----IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIA 189
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGR 222
PE D +AFG++L ++++G+
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 151
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR T D+ T + T Y APE N +
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE--MTGYVATRWYRAPEIMLNWMHYN 208
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 209 QTVDIWSVGCIMAELLTGRTL 229
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 23 GDFSKENLLGEGGFGHVYKGE-LKDGQMIAAKV--RKEASTQGFAEFQSEVYVLNFARHK 79
G++ +G+G F V + G+ +A K+ + + ++ + EV ++ H
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 80 NIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHE 139
NIV L E LV EY + +L ++ + A +++ H+
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 140 ECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPE-YAE 198
+ I+HRD++ N+LL D + DFG + T + + T G+ Y APE +
Sbjct: 125 KF----IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPYAAPELFQG 179
Query: 199 NGIVSIRTDVYAFGIILLQLMSG 221
DV++ G+IL L+SG
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQGFAEFQS---EVYVLNFARHK 79
DF+ +LG+G FG V E K ++ A K+ K+ + + E VL
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 80 NIVMLLGFCCKENLNI-LVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIGTAKG 133
+ L C + + V EY+ L +H+ F +V YAA I A G
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF-----YAAEI--AIG 454
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLA 193
L FL + II+RD++ N++L + + DFG+ + D GT Y+A
Sbjct: 455 LFFLQSKG----IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIA 510
Query: 194 PEYAENGIVSIRTDVYAFGIILLQLMSGR 222
PE D +AFG++L ++++G+
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 27 KENLLGEGGFGHVYKG-ELKDGQMIAAKV---RKEASTQGFAEFQSEVYVLNFAR-HKNI 81
K+ LGEG F K K Q A K+ R EA+TQ E+ L H NI
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ------KEITALKLCEGHPNI 68
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHE 139
V L + LV E + L F+ + + + A+ I + +H+
Sbjct: 69 VKLHEVFHDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 140 ECRGGPIIHRDMRPSNILLTHDFVPM---LGDFGLARWKTTDD-PVQTKILGTLGYLAPE 195
++HRD++P N+L T + + + DFG AR K D+ P++T TL Y APE
Sbjct: 125 V----GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPE 179
Query: 196 YAENGIVSIRTDVYAFGIILLQLMSGR 222
D+++ G+IL ++SG+
Sbjct: 180 LLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 27 KENLLGEGGFGHVYKGELKDG-----QMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNI 81
+ ++G+G FG VY GE D Q + + Q F E ++ H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 82 VMLLGFCCK-ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ L+G E L ++ Y+C+ L + + + + A+G+ +L E+
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDL-LQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+HRD+ N +L F + DFGLAR + + ++ + + A
Sbjct: 144 ----KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--PVKWTAL 197
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMS 220
E + + ++DV++FG++L +L++
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 15/209 (7%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGE-LKDGQMIAAKV--RKEASTQGFAEFQSEVYVLNF 75
Q G++ +G+G F V + G+ +A K+ + + ++ + EV ++
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLR 135
H NIV L E LV EY +FD L H R AK +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASG----GEVFD----YLVAHGRMKEKEARAKFRQ 121
Query: 136 FLH--EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLA 193
+ + C I+HRD++ N+LL D + DFG + T + + G Y A
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA-FCGAPPYAA 180
Query: 194 PE-YAENGIVSIRTDVYAFGIILLQLMSG 221
PE + DV++ G+IL L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 55/289 (19%)
Query: 31 LGEGGFGHVYKG---ELKD-GQM----IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
LG+G F ++KG E+ D GQ+ + KV +A F +++ HK++V
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESV-LEWHQRYAAAIGTAKGLRFLHEEC 141
+ G C + NILV E++ SL +L N + + W A + A + FL E
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWA--MHFLEENT 133
Query: 142 RGGPIIHRDMRPSNILLTHD---------FVPMLGDFGLARWKTTDDPVQTKILGTLGYL 192
+IH ++ NILL + F+ L D G++ D +Q +I ++
Sbjct: 134 ----LIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPKDILQERI----PWV 184
Query: 193 APEYAENGI-VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL-- 249
PE EN +++ TD ++FG L ++ SG G++P +L KL
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSG-------GDKPLSALDSQ-----RKLQFYE 232
Query: 250 --HELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEG 296
H+L P+ +A C+ P+ RPS ++R L
Sbjct: 233 DRHQLPAPKAAE---------LANLINNCMDYEPDHRPSFRAIIRDLNS 272
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 127 AIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
A+ K L LH + +IHRD++PSN+L+ + DFG++ + DD +
Sbjct: 115 AVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGY-LVDDVAKDIDA 170
Query: 187 GTLGYLAPEYAENGI----VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEP 242
G Y+APE + S+++D+++ GI +++L R D G P Q L+Q E
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-TPFQQLKQVVE- 228
Query: 243 LIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVR 292
+P + D + + T+ C+++N + RP+ E+++
Sbjct: 229 -----------EPSPQLPADKFSAEFVDFTSQ-CLKKNSKERPTYPELMQ 266
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 23 GDFSKENLLGEGGFGHVYKGELKDGQMIAAKV-------RKEASTQGFAEFQSEVYVLNF 75
G + +LLGEG +G V E+ D + + + + G A + E+ +L
Sbjct: 5 GKYLMGDLLGEGSYGKV--KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR 62
Query: 76 ARHKNIVMLLGFCCKENLN--ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
RHKN++ L+ E +V EY C + L E Q + G
Sbjct: 63 LRHKNVIQLVDVLYNEEKQKMYMVMEY-CVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDG 121
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWK---TTDDPVQTKILGTLG 190
L +LH + I+H+D++P N+LLT + G+A DD +T G+
Sbjct: 122 LEYLHSQG----IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSPA 176
Query: 191 YLAPEYAENGIVS---IRTDVYAFGIILLQLMSG 221
+ PE A NG+ + + D+++ G+ L + +G
Sbjct: 177 FQPPEIA-NGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 10/195 (5%)
Query: 31 LGEGGFGHV-YKGELKDGQMIAAKVR-KEASTQGFAEFQSEVYVLNFARHKNIVMLLGFC 88
+G GGF V + G+M+A K+ K ++E+ L RH++I L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIH 148
N +V EY L ++ ++ L + + ++H + H
Sbjct: 78 ETANKIFMVLEYCPGGELFDYII--SQDRLSEEETRVVFRQIVSAVAYVHSQGYA----H 131
Query: 149 RDMRPSNILLTHDFVPMLGDFGL-ARWKTTDDPVQTKILGTLGYLAPEYAE-NGIVSIRT 206
RD++P N+L L DFGL A+ K D G+L Y APE + +
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEA 191
Query: 207 DVYAFGIILLQLMSG 221
DV++ GI+L LM G
Sbjct: 192 DVWSMGILLYVLMCG 206
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 167
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR TDD + + T Y APE N +
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGYV-ATRWYRAPEIMLNWMHYN 224
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 225 QTVDIWSVGCIMAELLTGRTL 245
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 20/161 (12%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 132 LYQMLVGIKHLH----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPYV 186
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQLMSG 221
T Y APE Y EN D+++ G+I+ +++ G
Sbjct: 187 VTRYYRAPEVILGMGYKEN------VDIWSVGVIMGEMIKG 221
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 15/209 (7%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGE-LKDGQMIAAKV--RKEASTQGFAEFQSEVYVLNF 75
Q G++ +G+G F V + G+ +A ++ + + ++ + EV ++
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLR 135
H NIV L E LV EY +FD L H R AK +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASG----GEVFD----YLVAHGRMKEKEARAKFRQ 121
Query: 136 FLH--EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLA 193
+ + C I+HRD++ N+LL D + DFG + T + + + G+ Y A
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD-EFCGSPPYAA 180
Query: 194 PE-YAENGIVSIRTDVYAFGIILLQLMSG 221
PE + DV++ G+IL L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 127 AIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
A+ K L LH + +IHRD++PSN+L+ + DFG++ + D +T
Sbjct: 159 AVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGY-LVDSVAKTIDA 214
Query: 187 GTLGYLAPEYAENGI----VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEP 242
G Y+APE + S+++D+++ GI +++L R D G P Q L+Q E
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-TPFQQLKQVVE- 272
Query: 243 LIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVR 292
+P + D + + T+ C+++N + RP+ E+++
Sbjct: 273 -----------EPSPQLPADKFSAEFVDFTSQ-CLKKNSKERPTYPELMQ 310
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 20/161 (12%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 132 LYQMLVGIKHLH----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPYV 186
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQLMSG 221
T Y APE Y EN D+++ G+I+ +++ G
Sbjct: 187 VTRYYRAPEVILGMGYKEN------VDIWSVGVIMGEMIKG 221
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 39/278 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVR--KEASTQGFAEFQSEVYVLN-FARHKN-IVMLLG 86
+G GG V++ + Q+ A K +EA Q +++E+ LN +H + I+ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPI 146
+ + +V E C +S+ W +R + + + +H+ I
Sbjct: 124 YEITDQYIYMVME--CGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG----I 176
Query: 147 IHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYA------- 197
+H D++P+N L+ + ++ DFG+A D V+ +GT+ Y+ PE
Sbjct: 177 VHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 198 ENG----IVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
ENG +S ++DV++ G IL + G+ QQ + Q ++ LH +I
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-------QQIINQISK-------LHAII 281
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
DP E + + C++R+P+ R S+ E++
Sbjct: 282 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 39/278 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVR--KEASTQGFAEFQSEVYVLN-FARHKN-IVMLLG 86
+G GG V++ + Q+ A K +EA Q +++E+ LN +H + I+ L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPI 146
+ + +V E C +S+ W +R + + + +H+ I
Sbjct: 77 YEITDQYIYMVME--CGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG----I 129
Query: 147 IHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYA------- 197
+H D++P+N L+ + ++ DFG+A D V+ +GT+ Y+ PE
Sbjct: 130 VHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 188
Query: 198 ENG----IVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
ENG +S ++DV++ G IL + G+ QQ + Q ++ LH +I
Sbjct: 189 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-------QQIINQISK-------LHAII 234
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
DP E + + C++R+P+ R S+ E++
Sbjct: 235 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 127 AIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ K L +L E+ +IHRD++PSNILL L DFG++ + DD + +
Sbjct: 130 TVAIVKALYYLKEK---HGVIHRDVKPSNILLDERGQIKLCDFGIS-GRLVDDKAKDRSA 185
Query: 187 GTLGYLAPEYAE-----NGIVSIRTDVYAFGIILLQLMSGR 222
G Y+APE + IR DV++ GI L++L +G+
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 34/268 (12%)
Query: 31 LGEGGFGHVYKGE--LKDGQMIAAKVR-----KEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG V +GE G+ ++ V+ + + +F EV ++ H+N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L G + ++ L +L RYA + A+G+ +L +
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK--- 140
Query: 144 GPIIHRDMRPSNILL-THDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYAEN 199
IHRD+ N+LL T D V +GDFGL R +D +Q + APE +
Sbjct: 141 -RFIHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
S +D + FG+ L ++ + G+EP L ++ K+ PR E+
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLN--GSQILHKIDKEGERLPRPED 249
Query: 260 -SYDTYELYLMAKTAYLCVQRNPEGRPS 286
D Y + + C PE RP+
Sbjct: 250 CPQDIYNVMVQ------CWAHKPEDRPT 271
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 39/278 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKV--RKEASTQGFAEFQSEVYVLN-FARHKN-IVMLLG 86
+G GG V++ + Q+ A K +EA Q +++E+ LN +H + I+ L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPI 146
+ + +V E C +S+ W +R + + + +H+ I
Sbjct: 96 YEITDQYIYMVME--CGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG----I 148
Query: 147 IHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYA------- 197
+H D++P+N L+ + ++ DFG+A D V+ +GT+ Y+ PE
Sbjct: 149 VHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 198 ENG----IVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
ENG +S ++DV++ G IL + G+ QQ + Q ++ LH +I
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-------QQIINQISK-------LHAII 253
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
DP E + + C++R+P+ R S+ E++
Sbjct: 254 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 39/278 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVR--KEASTQGFAEFQSEVYVLN-FARHKN-IVMLLG 86
+G GG V++ + Q+ A K +EA Q +++E+ LN +H + I+ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPI 146
+ + +V E C +S+ W +R + + + +H+ I
Sbjct: 124 YEITDQYIYMVME--CGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG----I 176
Query: 147 IHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYA------- 197
+H D++P+N L+ + ++ DFG+A D V+ +GT+ Y+ PE
Sbjct: 177 VHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 198 ENG----IVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
ENG +S ++DV++ G IL + G+ QQ + Q ++ LH +I
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-------QQIINQISK-------LHAII 281
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
DP E + + C++R+P+ R S+ E++
Sbjct: 282 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 39/278 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKV--RKEASTQGFAEFQSEVYVLN-FARHKN-IVMLLG 86
+G GG V++ + Q+ A K +EA Q +++E+ LN +H + I+ L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPI 146
+ + +V E C +S+ W +R + + + +H+ I
Sbjct: 96 YEITDQYIYMVME--CGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG----I 148
Query: 147 IHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYA------- 197
+H D++P+N L+ + ++ DFG+A D V+ +GT+ Y+ PE
Sbjct: 149 VHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 198 ENG----IVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
ENG +S ++DV++ G IL + G+ QQ + Q ++ LH +I
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-------QQIINQISK-------LHAII 253
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
DP E + + C++R+P+ R S+ E++
Sbjct: 254 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 39/278 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKV--RKEASTQGFAEFQSEVYVLN-FARHKN-IVMLLG 86
+G GG V++ + Q+ A K +EA Q +++E+ LN +H + I+ L
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPI 146
+ + +V E C +S+ W +R + + + +H+ I
Sbjct: 76 YEITDQYIYMVME--CGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG----I 128
Query: 147 IHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYA------- 197
+H D++P+N L+ + ++ DFG+A D V+ +GT+ Y+ PE
Sbjct: 129 VHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 187
Query: 198 ENG----IVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
ENG +S ++DV++ G IL + G+ QQ + Q ++ LH +I
Sbjct: 188 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-------QQIINQISK-------LHAII 233
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
DP E + + C++R+P+ R S+ E++
Sbjct: 234 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 34/268 (12%)
Query: 31 LGEGGFGHVYKGEL--KDGQMIAAKVR-----KEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG V +GE G+ ++ V+ + + +F EV ++ H+N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L G + ++ L +L RYA + A+G+ +L +
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK--- 140
Query: 144 GPIIHRDMRPSNILL-THDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYAEN 199
IHRD+ N+LL T D V +GDFGL R +D +Q + APE +
Sbjct: 141 -RFIHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
S +D + FG+ L ++ + G+EP L ++ K+ PR E+
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLN--GSQILHKIDKEGERLPRPED 249
Query: 260 -SYDTYELYLMAKTAYLCVQRNPEGRPS 286
D Y + + C PE RP+
Sbjct: 250 CPQDIYNVMVQ------CWAHKPEDRPT 271
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHV---YKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V Y L+ + R S E+ +L +H+N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F ++ Y+ + L + ++++ + H ++ +GL+++H
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLV-YQLLRGLKYIH----SA 150
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR D T + T Y APE N +
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L+ G+ +
Sbjct: 208 QTVDIWSVGCIMAELLQGKAL 228
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 39/278 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKV--RKEASTQGFAEFQSEVYVLN-FARHKN-IVMLLG 86
+G GG V++ + Q+ A K +EA Q +++E+ LN +H + I+ L
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPI 146
+ + +V E C +S+ W +R + + + +H+ I
Sbjct: 80 YEITDQYIYMVME--CGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG----I 132
Query: 147 IHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYA------- 197
+H D++P+N L+ + ++ DFG+A D V+ +GT+ Y+ PE
Sbjct: 133 VHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 191
Query: 198 ENG----IVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
ENG +S ++DV++ G IL + G+ QQ + Q ++ LH +I
Sbjct: 192 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-------QQIINQISK-------LHAII 237
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
DP E + + C++R+P+ R S+ E++
Sbjct: 238 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 34/268 (12%)
Query: 31 LGEGGFGHVYKGEL--KDGQMIAAKVR-----KEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG V +GE G+ ++ V+ + + +F EV ++ H+N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L G + ++ L +L RYA + A+G+ +L +
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK--- 130
Query: 144 GPIIHRDMRPSNILL-THDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYAEN 199
IHRD+ N+LL T D V +GDFGL R +D +Q + APE +
Sbjct: 131 -RFIHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
S +D + FG+ L ++ + G+EP L ++ K+ PR E+
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLN--GSQILHKIDKEGERLPRPED 239
Query: 260 -SYDTYELYLMAKTAYLCVQRNPEGRPS 286
D Y + + C PE RP+
Sbjct: 240 CPQDIYNVMVQ------CWAHKPEDRPT 261
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 34/268 (12%)
Query: 31 LGEGGFGHVYKGEL--KDGQMIAAKVR-----KEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG V +GE G+ ++ V+ + + +F EV ++ H+N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L G + ++ L +L RYA + A+G+ +L +
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK--- 130
Query: 144 GPIIHRDMRPSNILL-THDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYAEN 199
IHRD+ N+LL T D V +GDFGL R +D +Q + APE +
Sbjct: 131 -RFIHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
S +D + FG+ L ++ + G+EP L ++ K+ PR E+
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLN--GSQILHKIDKEGERLPRPED 239
Query: 260 -SYDTYELYLMAKTAYLCVQRNPEGRPS 286
D Y + + C PE RP+
Sbjct: 240 CPQDIYNVMVQ------CWAHKPEDRPT 261
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 34/268 (12%)
Query: 31 LGEGGFGHVYKGELK--DGQMIAAKVR-----KEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG V +GE G+ ++ V+ + + +F EV ++ H+N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L G + ++ L +L RYA + A+G+ +L +
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK--- 134
Query: 144 GPIIHRDMRPSNILL-THDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYAEN 199
IHRD+ N+LL T D V +GDFGL R +D +Q + APE +
Sbjct: 135 -RFIHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
S +D + FG+ L ++ + G+EP L ++ K+ PR E+
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLN--GSQILHKIDKEGERLPRPED 243
Query: 260 -SYDTYELYLMAKTAYLCVQRNPEGRPS 286
D Y + + C PE RP+
Sbjct: 244 CPQDIYNVMVQ------CWAHKPEDRPT 265
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 34/268 (12%)
Query: 31 LGEGGFGHVYKGELK--DGQMIAAKVR-----KEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG V +GE G+ ++ V+ + + +F EV ++ H+N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L G + ++ L +L RYA + A+G+ +L +
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK--- 134
Query: 144 GPIIHRDMRPSNILL-THDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYAEN 199
IHRD+ N+LL T D V +GDFGL R +D +Q + APE +
Sbjct: 135 -RFIHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
S +D + FG+ L ++ + G+EP L ++ K+ PR E+
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLN--GSQILHKIDKEGERLPRPED 243
Query: 260 S-YDTYELYLMAKTAYLCVQRNPEGRPS 286
D Y + + C PE RP+
Sbjct: 244 CPQDIYNVMVQ------CWAHKPEDRPT 265
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 35/211 (16%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVY---------VLNFARHKNI 81
+G G +G V DG+ AKV A + + FQSE++ +L RH+N+
Sbjct: 33 VGSGAYGAVCSA--VDGR-TGAKV---AIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 82 VMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAA------AIGTAKGL 134
+ LL F E L+ Y+ + L L H++ KGL
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDL-----GKLMKHEKLGEDRIQFLVYQMLKGL 141
Query: 135 RFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAP 194
R++H IIHRD++P N+ + D + DFGLAR D + ++ T Y AP
Sbjct: 142 RYIH----AAGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXGXVV-TRWYRAP 194
Query: 195 EYAENGIVSIRT-DVYAFGIILLQLMSGRKV 224
E N + +T D+++ G I+ ++++G+ +
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGKTL 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DF LAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 34/268 (12%)
Query: 31 LGEGGFGHVYKGELK--DGQMIAAKVR-----KEASTQGFAEFQSEVYVLNFARHKNIVM 83
LG+G FG V +GE G+ ++ V+ + + +F EV ++ H+N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L G + ++ L +L RYA + A+G+ +L +
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK--- 130
Query: 144 GPIIHRDMRPSNILL-THDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYAEN 199
IHRD+ N+LL T D V +GDFGL R +D +Q + APE +
Sbjct: 131 -RFIHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 200 GIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIEN 259
S +D + FG+ L ++ + G+EP L ++ K+ PR E+
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLN--GSQILHKIDKEGERLPRPED 239
Query: 260 S-YDTYELYLMAKTAYLCVQRNPEGRPS 286
D Y + + C PE RP+
Sbjct: 240 CPQDIYNVMVQ------CWAHKPEDRPT 261
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 40/290 (13%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
D + +G+G +G V++G + G+ +A K+ + + ++E+Y RH+NI
Sbjct: 9 DITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENI-- 64
Query: 84 LLGFCCKENLN-------ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRF 136
LGF + + L+ Y SL+ +L T L+ + A GL
Sbjct: 65 -LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAH 120
Query: 137 LHEE---CRGGPII-HRDMRPSNILLTHDFVPMLGDFGLARWKTTD----DPVQTKILGT 188
LH E +G P I HRD++ NIL+ + + D GLA + D +GT
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 189 LGYLAPEYAENGI------VSIRTDVYAFGIILLQLMSGRKVVDMNG--EEPQQSLRQWA 240
Y+APE + I R D++AFG++L ++ R++V NG E+ +
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVS-NGIVEDYKPPFYDVV 237
Query: 241 --EPLIEKLALHELID---PRIENS-YDTYELYLMAKTAYLCVQRNPEGR 284
+P E + +D P I N + L +AK C +NP R
Sbjct: 238 PNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK R ++S +G + + + EV +L +H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + IL+ E + L L + E + I G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH----S 132
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP + DFGLA + + I GT ++APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN-IFGTPAFVAPEIVNY 191
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 EPLGLEADMWSIGVITYILLSG 213
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHV---YKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V Y L+ + R S E+ +L +H+N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F ++ Y+ + L + +++ + H ++ +GL+++H
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLV-YQLLRGLKYIH----SA 142
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR D T + T Y APE N +
Sbjct: 143 GIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L+ G+ +
Sbjct: 200 QTVDIWSVGCIMAELLQGKAL 220
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 123/283 (43%), Gaps = 40/283 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G+G +G V++G + G+ +A K+ + + ++E+Y RH+NI LGF
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENI---LGFIAS 99
Query: 91 ENLN-------ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE--- 140
+ + L+ Y SL+ +L T L+ + A GL LH E
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 141 CRGGPII-HRDMRPSNILLTHDFVPMLGDFGLARWKTTD----DPVQTKILGTLGYLAPE 195
+G P I HRD++ NIL+ + + D GLA + D +GT Y+APE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 216
Query: 196 YAENGI------VSIRTDVYAFGIILLQLMSGRKVVDMNG--EEPQQSLRQWA--EPLIE 245
+ I R D++AFG++L ++ R++V NG E+ + +P E
Sbjct: 217 VLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVS-NGIVEDYKPPFYDVVPNDPSFE 273
Query: 246 KLALHELID---PRIENS-YDTYELYLMAKTAYLCVQRNPEGR 284
+ +D P I N + L +AK C +NP R
Sbjct: 274 DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 316
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 123/283 (43%), Gaps = 40/283 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCCK 90
+G+G +G V++G + G+ +A K+ + + ++E+Y RH+NI LGF
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENI---LGFIAS 70
Query: 91 ENLN-------ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE--- 140
+ + L+ Y SL+ +L T L+ + A GL LH E
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 141 CRGGPII-HRDMRPSNILLTHDFVPMLGDFGLARWKTTD----DPVQTKILGTLGYLAPE 195
+G P I HRD++ NIL+ + + D GLA + D +GT Y+APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 196 YAENGI------VSIRTDVYAFGIILLQLMSGRKVVDMNG--EEPQQSLRQWA--EPLIE 245
+ I R D++AFG++L ++ R++V NG E+ + +P E
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVS-NGIVEDYKPPFYDVVPNDPSFE 244
Query: 246 KLALHELID---PRIENS-YDTYELYLMAKTAYLCVQRNPEGR 284
+ +D P I N + L +AK C +NP R
Sbjct: 245 DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ +L HKNI+ LL F ++ L Y+ + + +L L+ H+R +
Sbjct: 73 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T+ + T +
Sbjct: 132 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF-MMTPYV 186
Query: 187 GTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
T Y APE + D+++ G I+ +L+ G
Sbjct: 187 VTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHV---YKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V Y L+ + R S E+ +L +H+N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F ++ Y+ + L + +++ + H ++ +GL+++H
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLV-YQLLRGLKYIH----SA 150
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + DFGLAR D T + T Y APE N +
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L+ G+ +
Sbjct: 208 QTVDIWSVGCIMAELLQGKAL 228
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 35/213 (16%)
Query: 31 LGEGGFGHVYKGELKDGQMIAA----------KVRKEASTQGFAEFQSEVY----VLNFA 76
LG G +G V + K+G A K R + +F E+Y +L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 77 RHKNIVMLLGFCCKENLNILVYEY-----ICNKSLHWHLFDNTESVLEWHQRYAAAIGTA 131
H NI+ L + LV E+ + + ++ H FD ++ Q
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQ-------IL 156
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPM---LGDFGLARWKTTDDPVQTKILGT 188
G+ +LH+ I+HRD++P NILL + + + DFGL+ + + D ++ + LGT
Sbjct: 157 SGICYLHKH----NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR-LGT 211
Query: 189 LGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
Y+APE + + + DV++ G+I+ L+ G
Sbjct: 212 AYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCG 243
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQS---EVYVLNFARHKNI 81
++ + +GEG +G V + + +RK + + Q E+ +L RH+NI
Sbjct: 29 YTNLSYIGEGAYGMVCSA-YDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 82 VMLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHE 139
+ + + + YI + L+ T+ + H Y +GL+++H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH- 145
Query: 140 ECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEY 196
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 146 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 197 AENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + FGLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 30 LLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFAR-HKNIVMLLGF 87
LLGEG + V L++G+ A K+ ++ + + EV L + +KNI+ L+ F
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 88 CCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEECRGGP 145
+ LV+E + S+ H+ + +++R A+ + A L FLH +
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHI----QKQKHFNEREASRVVRDVAAALDFLHTK----G 131
Query: 146 IIHRDMRPSNILL--THDFVPM-LGDFGLA---RWKTTDDPVQTKIL----GTLGYLAPE 195
I HRD++P NIL P+ + DF L + + P+ T L G+ Y+APE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 196 YAE-----NGIVSIRTDVYAFGIILLQLMSG 221
E R D+++ G++L ++SG
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK R ++S +G + + + EV +L +H N++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + IL+ E + L L + E + I G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH----S 132
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP + DFGLA + + I GT ++APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNY 191
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 EPLGLEADMWSIGVITYILLSG 213
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + D GLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 27/268 (10%)
Query: 31 LGEGGFGHVYKGELKDG--QMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFC 88
LG G FG V+ E + + + + K+ S + ++E+ VL H NI+ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 89 CKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEECRGGPI 146
+ +V E L + + Y A + L + H + +
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ----HV 145
Query: 147 IHRDMRPSNILL--THDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVS 203
+H+D++P NIL T P+ + DFGLA +D+ T GT Y+APE + V+
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH-STNAAGTALYMAPEVFKRD-VT 203
Query: 204 IRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDT 263
+ D+++ G+++ L++G E Q + EP A+ P + D
Sbjct: 204 FKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP---NYAVE--CRPLTPQAVDL 258
Query: 264 YELYLMAKTAYLCVQRNPEGRPSMGEVV 291
+ L ++PE RPS +V+
Sbjct: 259 LKQMLT---------KDPERRPSAAQVL 277
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK R ++S +G + + + EV +L +H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + IL+ E + L L + E + I G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH----S 132
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP + DFGLA + + I GT ++APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNY 191
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 EPLGLEADMWSIGVITYILLSG 213
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ +L HKNI+ LL F ++ L Y+ + + +L L+ H+R +
Sbjct: 71 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELD-HERMSYL 129
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR +T+ + T +
Sbjct: 130 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNF-MMTPYV 184
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQLMSGRKV 224
T Y APE Y EN D+++ G I+ +L+ G +
Sbjct: 185 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGELVKGSVI 222
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK R ++S +G + + + EV +L +H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + IL+ E + L L + E + I G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH----S 132
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP + DFGLA + + I GT ++APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNY 191
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 EPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK R ++S +G + + + EV +L +H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + IL+ E + L L + E + I G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH----S 132
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP + DFGLA + + I GT ++APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNY 191
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 EPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK R ++S +G + + + EV +L +H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + IL+ E + L L + E + I G+ +LH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH----S 131
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP + DFGLA + + I GT ++APE
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNY 190
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 191 EPLGLEADMWSIGVITYILLSG 212
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 85/209 (40%), Gaps = 15/209 (7%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGE-LKDGQMIAAKV--RKEASTQGFAEFQSEVYVLNF 75
Q G++ +G+G F V + G+ +A K+ + + ++ + EV +
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKV 69
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLR 135
H NIV L E LV EY +FD L H R AK +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASG----GEVFD----YLVAHGRXKEKEARAKFRQ 121
Query: 136 FLH--EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLA 193
+ + C I+HRD++ N+LL D + DFG + T + + G Y A
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA-FCGAPPYAA 180
Query: 194 PE-YAENGIVSIRTDVYAFGIILLQLMSG 221
PE + DV++ G+IL L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK R ++S +G + + + EV +L +H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + IL+ E + L L + E + I G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH----S 132
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP + DFGLA + + I GT ++APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNY 191
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 EPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK R ++S +G + + + EV +L +H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + IL+ E + L L + E + I G+ +LH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH----S 131
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP + DFGLA + + I GT ++APE
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNY 190
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 191 EPLGLEADMWSIGVITYILLSG 212
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK R ++S +G + + + EV +L +H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + IL+ E + L L + E + I G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH----S 132
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP + DFGLA + + I GT ++APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNY 191
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 EPLGLEADMWSIGVITYILLSG 213
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + D GLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ-SEVYVLNFARHKNIV 82
++ + +GEG +G V ++ +A K Q + + E+ +L RH+NI+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 143
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 144 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKG--ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ + +GEG +G V L ++ K+ E+ +L RH+NI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 145
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 146 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKG--ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ + +GEG +G V L ++ K+ E+ +L RH+NI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 145
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 146 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKG--ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ + +GEG +G V L ++ K+ E+ +L RH+NI+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 146
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 147 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNRPI 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKG--ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ + +GEG +G V L ++ K+ E+ +L RH+NI+
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 147
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 148 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNRPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKG--ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ + +GEG +G V L ++ K+ E+ +L RH+NI+
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 138
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 139 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNRPI 224
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKG--ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ + +GEG +G V L ++ K+ E+ +L RH+NI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 145
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 146 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK R ++S +G + + + EV +L +H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + IL+ E + L L + E + I G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH----S 132
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP + DFGLA + + I GT ++APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNY 191
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 EPLGLEADMWSIGVITYILLSG 213
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ-SEVYVLNFARHKNIV 82
++ + +GEG +G V ++ +A K Q + + E+ +L RH+NI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 141
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK R ++S +G + + + EV +L +H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + IL+ E + L L + E + I G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH----S 132
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP + DFGLA + + I GT ++APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNY 191
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 EPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK R ++S +G + + + EV +L +H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + IL+ E + L L + E + I G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH----S 132
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP + DFGLA + + I GT ++APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNY 191
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 EPLGLEADMWSIGVITYILLSG 213
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKG--ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ + +GEG +G V L ++ K+ E+ +L RH+NI+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 139
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 140 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNRPI 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKG--ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ + +GEG +G V L ++ K+ E+ +L RH+NI+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 139
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 140 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNRPI 225
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK R ++S +G + + + EV +L +H N++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + IL+ E + L L + E + I G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH----S 132
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP + DFGLA + + I GT ++APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNY 191
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 EPLGLEADMWSIGVITYILLSG 213
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ-SEVYVLNFARHKNIV 82
++ + +GEG +G V ++ +A K Q + + E+ +L RH+NI+
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 149
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 150 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSNRPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ-SEVYVLNFARHKNIV 82
++ + +GEG +G V ++ +A K Q + + E+ +L RH+NI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 141
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 142 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ-SEVYVLNFARHKNIV 82
++ + +GEG +G V ++ +A K Q + + E+ +L RH+NI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 141
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ-SEVYVLNFARHKNIV 82
++ + +GEG +G V ++ +A K Q + + E+ +L RH+NI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 141
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 142 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ-SEVYVLNFARHKNIV 82
++ + +GEG +G V ++ +A K Q + + E+ +L RH+NI+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 143
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 144 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ-SEVYVLNFARHKNIV 82
++ + +GEG +G V ++ +A K Q + + E+ +L RH+NI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 141
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 132 LYQMLVGIKHLH----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPYV 186
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQLMSG 221
T Y APE Y EN D+++ G I+ +++ G
Sbjct: 187 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMIKG 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAK--VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLG- 86
+G G +G V + K G +A K R S E+ +L +H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 87 FCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEECRGG 144
F +L Y+ + L + + + + H ++ +GL+++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH----SA 144
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSI 204
IIHRD++PSN+ + D + D GLAR TDD + T + T Y APE N +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEM-TGYVATRWYRAPEIMLNWMHYN 201
Query: 205 RT-DVYAFGIILLQLMSGRKV 224
+T D+++ G I+ +L++GR +
Sbjct: 202 QTVDIWSVGCIMAELLTGRTL 222
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 30 LLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCC 89
L+G+G FG VY G I + + F+ EV RH+N+V+ +G C
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG-AC 98
Query: 90 KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPIIHR 149
++ + +C + + + + VL+ ++ A KG+ +LH + I+H+
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG----ILHK 154
Query: 150 DMRPSNILLTHDFVPMLGDFGL--------ARWKTTDDPVQTKILGTLG-----YLAPEY 196
D++ N+ + V ++ DFGL A + +Q L L L+P+
Sbjct: 155 DLKSKNVFYDNGKV-VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDT 213
Query: 197 AENGI-VSIRTDVYAFGIILLQL 218
E+ + S +DV+A G I +L
Sbjct: 214 EEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 15/214 (7%)
Query: 14 SFSEIQQATGDFSKENLLGEGGFGHVYKGE-LKDGQMIAAKV--RKEASTQGFAEFQSEV 70
S ++ Q G++ +G+G F V + G+ +A K+ + + + + EV
Sbjct: 6 SCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREV 65
Query: 71 YVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGT 130
++ H NIV L E L+ EY +FD L H R
Sbjct: 66 RIMKILNHPNIVKLFEVIETEKTLYLIMEYASG----GEVFD----YLVAHGRMKEKEAR 117
Query: 131 AKGLRFLH--EECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGT 188
+K + + + C I+HRD++ N+LL D + DFG + T + G
Sbjct: 118 SKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA-FCGA 176
Query: 189 LGYLAPE-YAENGIVSIRTDVYAFGIILLQLMSG 221
Y APE + DV++ G+IL L+SG
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ-SEVYVLNFARHKNIV 82
++ + +GEG +G V ++ +A K Q + + E+ +L RH+NI+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 161
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 162 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQ-SEVYVLNFARHKNIV 82
++ + +GEG +G V ++ +A K Q + + E+ +L RH+NI+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 143
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D T+ + T Y APE
Sbjct: 144 --SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 39/278 (14%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAKVR--KEASTQGFAEFQSEVYVLN-FARHKN-IVMLLG 86
+G GG V++ + Q+ A K +EA Q +++E+ LN +H + I+ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPI 146
+ + +V E C +S+ W +R + + + +H+ I
Sbjct: 124 YEITDQYIYMVME--CGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG----I 176
Query: 147 IHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP--VQTKILGTLGYLAPEYA------- 197
+H D++P+N L+ + ++ DFG+A D V+ +G + Y+ PE
Sbjct: 177 VHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSR 235
Query: 198 ENG----IVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELI 253
ENG +S ++DV++ G IL + G+ QQ + Q ++ LH +I
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-------QQIINQISK-------LHAII 281
Query: 254 DPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
DP E + + C++R+P+ R S+ E++
Sbjct: 282 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 132 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPYV 186
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQLMSG 221
T Y APE Y EN D+++ G I+ +++ G
Sbjct: 187 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMIKG 221
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 16/161 (9%)
Query: 69 EVYVL-NFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESV-LEWHQRYAA 126
E ++L A H +I+ L+ + LV++ + L +L TE V L + +
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKVALSEKETRSI 205
Query: 127 AIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ + FLH I+HRD++P NILL + L DFG + + ++ ++
Sbjct: 206 MRSLLEAVSFLH----ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR-ELC 260
Query: 187 GTLGYLAPEYAENGIVSI------RTDVYAFGIILLQLMSG 221
GT GYLAPE + + D++A G+IL L++G
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 31 LGEGGFGHVYK-GELKDGQMIAAKV----RKEASTQGFA--EFQSEVYVLNFARHKNIVM 83
LG G F V K E G AAK R ++S +G + + + EV +L +H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRG 143
L + IL+ E + L L + E + I G+ +LH
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLH----S 132
Query: 144 GPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
I H D++P NI+L VP + DFGLA + + I GT ++APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNY 191
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
+ + D+++ G+I L+SG
Sbjct: 192 EPLGLEADMWSIGVITYILLSG 213
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 148 HRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQT-KILGTLGYLAPEYAENGIVSIRT 206
HRD++P NIL++ D L DFG+A T + Q +GTL Y APE + R
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 207 DVYAFGIILLQLMSG 221
D+YA +L + ++G
Sbjct: 217 DIYALTCVLYECLTG 231
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQM-IAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F E+ LG G VY+ + K Q A KV K+ + ++E+ VL H NI+
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV--RTEIGVLLRLSHPNIIK 112
Query: 84 LLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAA--AIGTAKGLRFLHEEC 141
L LV E + LFD + +R AA + + +LHE
Sbjct: 113 LKEIFETPTEISLVLELVTGG----ELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG 168
Query: 142 RGGPIIHRDMRPSNILLTH---DFVPMLGDFGLARWKTTDDPVQTK-ILGTLGYLAPEYA 197
I+HRD++P N+L D + DFGL+ K + V K + GT GY APE
Sbjct: 169 ----IVHRDLKPENLLYATPAPDAPLKIADFGLS--KIVEHQVLMKTVCGTPGYCAPEIL 222
Query: 198 ENGIVSIRTDVYAFGIILLQLMSG 221
D+++ GII L+ G
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 19/211 (9%)
Query: 25 FSKENLLGEGGFGHVYKG--ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
+++ +GEG +G V ++ ++ K+ E+ +L RH+N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ L + YI + L+ ++ + H Y +GL+++H
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL-YQILRGLKYIH-- 161
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQ------TKILGTLGYLAP 194
++HRD++PSN+L+ + DFGLAR DP T+ + T Y AP
Sbjct: 162 --SANVLHRDLKPSNLLINTTCDLKICDFGLAR---IADPEHDHTGFLTEXVATRWYRAP 216
Query: 195 EYAENGIVSIRT-DVYAFGIILLQLMSGRKV 224
E N ++ D+++ G IL +++S R +
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL 132
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 133 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 187
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQLMSG 221
T Y APE Y EN D+++ G I+ +++ G
Sbjct: 188 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMIKG 222
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 17/198 (8%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGFCC 89
LG G FG V++ E G++ AK ++E+ ++N H ++ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 90 KENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIG----TAKGLRFLHEECRGGP 145
+ +L+ E++ LFD + ++ A I +GL+ +HE
Sbjct: 119 DKYEMVLILEFLSGG----ELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEHS---- 169
Query: 146 IIHRDMRPSNILLTHDFVPMLG--DFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVS 203
I+H D++P NI+ + DFGLA K D + T + APE + V
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLAT-KLNPDEIVKVTTATAEFAAPEIVDREPVG 228
Query: 204 IRTDVYAFGIILLQLMSG 221
TD++A G++ L+SG
Sbjct: 229 FYTDMWAIGVLGYVLLSG 246
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 132 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 186
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQLMSG 221
T Y APE Y EN D+++ G I+ +++ G
Sbjct: 187 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 132 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 186
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQLMSG 221
T Y APE Y EN D+++ G I+ +++ G
Sbjct: 187 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 132 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 186
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQLMSG 221
T Y APE Y EN D+++ G I+ +++ G
Sbjct: 187 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 132 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF-MMTPYV 186
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQLMSG 221
T Y APE Y EN D+++ G I+ +++ G
Sbjct: 187 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMIKG 221
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 19 QQATGDFSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKEAS---TQGFAEFQSEVYVLN 74
Q + + + LG G +G V + K G A K+ K++S T EV VL
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 75 FARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAK 132
H NI+ L F + LV E LFD ++ + AA I
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGG----ELFDEIILRQKFSEVDAAVIMKQVLS 132
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTKILGTL 189
G +LH+ I+HRD++P N+LL + D + + DFGL+ ++ + LGT
Sbjct: 133 GTTYLHKH----NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER-LGTA 187
Query: 190 GYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
Y+APE + DV++ G+IL L+ G
Sbjct: 188 YYIAPEVLRKKYDE-KCDVWSCGVILYILLCG 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 31 LGEGGFGHVYKGELK-DGQMIAAKVRKEAS---TQGFAEFQSEVYVLNFARHKNIVMLLG 86
LG G +G V + K G A K+ K++S T EV VL H NI+ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLHEECRGG 144
F + LV E LFD ++ + AA I G +LH+
Sbjct: 72 FFEDKRNYYLVMEVYRGG----ELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH---- 123
Query: 145 PIIHRDMRPSNILL---THDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI 201
I+HRD++P N+LL + D + + DFGL+ ++ + LGT Y+APE
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER-LGTAYYIAPEVLRKKY 182
Query: 202 VSIRTDVYAFGIILLQLMSG 221
+ DV++ G+IL L+ G
Sbjct: 183 DE-KCDVWSCGVILYILLCG 201
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 20/161 (12%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + +++
Sbjct: 132 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVV 187
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQLMSG 221
T Y APE Y EN D+++ G I+ +++ G
Sbjct: 188 -TRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMIKG 221
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGT 188
+GL+++H ++HRD++PSN+LL + DFGLAR D T+ + T
Sbjct: 139 RGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 189 LGYLAPEYAENGIVSIRT-DVYAFGIILLQLMSGRKV 224
Y APE N ++ D+++ G IL +++S R +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 127 AIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
A+ K L LH + +IHRD++PSN+L+ DFG++ + DD +
Sbjct: 142 AVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKXCDFGISGY-LVDDVAKDIDA 197
Query: 187 GTLGYLAPEYAENGI----VSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEP 242
G Y APE + S+++D+++ GI ++L R D G P Q L+Q E
Sbjct: 198 GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWG-TPFQQLKQVVE- 255
Query: 243 LIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEV 290
+P + D + + T+ C+++N + RP+ E+
Sbjct: 256 -----------EPSPQLPADKFSAEFVDFTSQ-CLKKNSKERPTYPEL 291
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 132 LYQMLXGIKHLH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPYV 186
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 187 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 20/161 (12%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 75 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL 133
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + +
Sbjct: 134 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMVPFV 188
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQLMSG 221
T Y APE Y EN D+++ G I+ +++ G
Sbjct: 189 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMIKG 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 29/237 (12%)
Query: 1 MKTELY---MKDPMKFSFSEIQQATGDFSKENL-LGEGGFGHVYKGELKDGQMIAAK--- 53
M TE+Y DP + E+ + E+ LG G FG V KG + +++
Sbjct: 1 MDTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVK 60
Query: 54 -VRKEASTQGFA-EFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYI----CNKSLH 107
++ EA+ E +E V+ + IV ++G C E+ +LV E NK L
Sbjct: 61 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQ 119
Query: 108 WHLFDNTESVLEW-HQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPML 166
+ ++++E HQ + G+++L E +HRD+ N+LL +
Sbjct: 120 QNRHVKDKNIIELVHQ-------VSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKI 168
Query: 167 GDFGLARWKTTDD---PVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
DFGL++ D+ QT + + APE S ++DV++FG+++ + S
Sbjct: 169 SDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 29/237 (12%)
Query: 1 MKTELY---MKDPMKFSFSEIQQATGDFSKENL-LGEGGFGHVYKGELKDGQMIAAK--- 53
M TE+Y DP + E+ + E+ LG G FG V KG + +++
Sbjct: 1 MDTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVK 60
Query: 54 -VRKEASTQGFA-EFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYI----CNKSLH 107
++ EA+ E +E V+ + IV ++G C E+ +LV E NK L
Sbjct: 61 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQ 119
Query: 108 WHLFDNTESVLEW-HQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPML 166
+ ++++E HQ + G+++L E +HRD+ N+LL +
Sbjct: 120 QNRHVKDKNIIELVHQ-------VSMGMKYLEE----SNFVHRDLAARNVLLVTQHYAKI 168
Query: 167 GDFGLARWKTTDD---PVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
DFGL++ D+ QT + + APE S ++DV++FG+++ + S
Sbjct: 169 SDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQMI--AAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ EN +G G +G V K ++ G I AAK + + F+ E+ ++ H NI+
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
L ++N +I + +C LF+ + + AA I K + C
Sbjct: 70 RLYE-TFEDNTDIYLVMELCTGG---ELFERVVHKRVFRESDAARI--MKDVLSAVAYCH 123
Query: 143 GGPIIHRDMRPSNILLTHDF--VPM-LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
+ HRD++P N L D P+ L DFGLA ++TK+ GT Y++P+ E
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV-GTPYYVSPQVLE- 181
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
G+ D ++ G+++ L+ G
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCG 203
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T ++ +++
Sbjct: 132 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV 187
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 188 -TRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVCHKILFPGRDYID 232
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQMI--AAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ EN +G G +G V K ++ G I AAK + + F+ E+ ++ H NI+
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
L ++N +I + +C LF+ + + AA I K + C
Sbjct: 87 RLYE-TFEDNTDIYLVMELCTGG---ELFERVVHKRVFRESDAARI--MKDVLSAVAYCH 140
Query: 143 GGPIIHRDMRPSNILLTHDF--VPM-LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN 199
+ HRD++P N L D P+ L DFGLA ++TK+ GT Y++P+ E
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV-GTPYYVSPQVLE- 198
Query: 200 GIVSIRTDVYAFGIILLQLMSG 221
G+ D ++ G+++ L+ G
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCG 220
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAK----VRKEASTQGFA-EFQSEVYVLNFARHKNIVMLL 85
LG G FG V KG + +++ ++ EA+ E +E V+ + IV ++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 86 GFCCKENLNILVYEYI----CNKSLHWHLFDNTESVLEW-HQRYAAAIGTAKGLRFLHEE 140
G C E+ +LV E NK L + ++++E HQ + G+++L E
Sbjct: 93 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ-------VSMGMKYLEE- 143
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD---PVQTKILGTLGYLAPEYA 197
+HRD+ N+LL + DFGL++ D+ QT + + APE
Sbjct: 144 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 200
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
S ++DV++FG+++ + S
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAK----VRKEASTQGFA-EFQSEVYVLNFARHKNIVMLL 85
LG G FG V KG + +++ ++ EA+ E +E V+ + IV ++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 86 GFCCKENLNILVYEYI----CNKSLHWHLFDNTESVLEW-HQRYAAAIGTAKGLRFLHEE 140
G C E+ +LV E NK L + ++++E HQ + G+++L E
Sbjct: 85 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ-------VSMGMKYLEE- 135
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD---PVQTKILGTLGYLAPEYA 197
+HRD+ N+LL + DFGL++ D+ QT + + APE
Sbjct: 136 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 192
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
S ++DV++FG+++ + S
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGT 188
+GL+++H ++HRD++PSN+LL + DFGLAR D T+ + T
Sbjct: 155 RGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 189 LGYLAPEYAENGIVSIRT-DVYAFGIILLQLMSGRKV 224
Y APE N ++ D+++ G IL +++S R +
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKG--ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ + +GEG +G V L ++ K+ E+ +L RH+NI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 145
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D + + T Y APE
Sbjct: 146 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 13/208 (6%)
Query: 25 FSKENLLGEGGFGHVYKG--ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ + +GEG +G V L ++ K+ E+ +L RH+NI+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 83 MLLGFCCKENLNILVYEYICNKSLHWHLFD--NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ + + YI + L+ T+ + H Y +GL+++H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-YQILRGLKYIH-- 146
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP---VQTKILGTLGYLAPEYA 197
++HRD++PSN+LL + DFGLAR D + + T Y APE
Sbjct: 147 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSGRKV 224
N ++ D+++ G IL +++S R +
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNRPI 232
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 29/216 (13%)
Query: 24 DFSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ ++G G FG VY+ +L D G+++A K QG A E+ ++ H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 83 MLLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FR 133
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGY 191
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 134 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-Y 188
Query: 192 LAPEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 189 RAPELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 222
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 132 LYQMLXGIKHLH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPYV 186
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 187 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAK----VRKEASTQGFA-EFQSEVYVLNFARHKNIVMLL 85
LG G FG V KG + +++ ++ EA+ E +E V+ + IV ++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 86 GFCCKENLNILVYEYI----CNKSLHWHLFDNTESVLEW-HQRYAAAIGTAKGLRFLHEE 140
G C E+ +LV E NK L + ++++E HQ + G+++L E
Sbjct: 437 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ-------VSMGMKYLEES 488
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD---PVQTKILGTLGYLAPEYA 197
+HRD+ N+LL + DFGL++ D+ QT + + APE
Sbjct: 489 N----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 544
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
S ++DV++FG+++ + S
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 29/237 (12%)
Query: 1 MKTELY---MKDPMKFSFSEIQQATGDFSKENL-LGEGGFGHVYKGELKDGQMIAAK--- 53
M TE+Y DP + E+ + E+ LG G FG V KG + +++
Sbjct: 344 MDTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVK 403
Query: 54 -VRKEASTQGFA-EFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYI----CNKSLH 107
++ EA+ E +E V+ + IV ++G C E+ +LV E NK L
Sbjct: 404 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQ 462
Query: 108 WHLFDNTESVLEW-HQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPML 166
+ ++++E HQ + G+++L E +HRD+ N+LL +
Sbjct: 463 QNRHVKDKNIIELVHQ-------VSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKI 511
Query: 167 GDFGLARWKTTDD---PVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMS 220
DFGL++ D+ QT + + APE S ++DV++FG+++ + S
Sbjct: 512 SDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAK----VRKEASTQGFA-EFQSEVYVLNFARHKNIVMLL 85
LG G FG V KG + +++ ++ EA+ E +E V+ + IV ++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 86 GFCCKENLNILVYEYI----CNKSLHWHLFDNTESVLEW-HQRYAAAIGTAKGLRFLHEE 140
G C E+ +LV E NK L + ++++E HQ + G+++L E
Sbjct: 75 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ-------VSMGMKYLEE- 125
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD---PVQTKILGTLGYLAPEYA 197
+HRD+ N+LL + DFGL++ D+ QT + + APE
Sbjct: 126 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
S ++DV++FG+++ + S
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAK----VRKEASTQGFA-EFQSEVYVLNFARHKNIVMLL 85
LG G FG V KG + +++ ++ EA+ E +E V+ + IV ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 86 GFCCKENLNILVYEYI----CNKSLHWHLFDNTESVLEW-HQRYAAAIGTAKGLRFLHEE 140
G C E+ +LV E NK L + ++++E HQ + G+++L E
Sbjct: 79 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ-------VSMGMKYLEE- 129
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD---PVQTKILGTLGYLAPEYA 197
+HRD+ N+LL + DFGL++ D+ QT + + APE
Sbjct: 130 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI 186
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
S ++DV++FG+++ + S
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 29/216 (13%)
Query: 24 DFSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ ++G G FG VY+ +L D G+++A K QG A E+ ++ H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 83 MLLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FR 133
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGY 191
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 134 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-Y 188
Query: 192 LAPEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 189 RAPELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 222
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAK----VRKEASTQGFA-EFQSEVYVLNFARHKNIVMLL 85
LG G FG V KG + +++ ++ EA+ E +E V+ + IV ++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 86 GFCCKENLNILVYEYI----CNKSLHWHLFDNTESVLEW-HQRYAAAIGTAKGLRFLHEE 140
G C E+ +LV E NK L + ++++E HQ + G+++L E
Sbjct: 73 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ-------VSMGMKYLEE- 123
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD---PVQTKILGTLGYLAPEYA 197
+HRD+ N+LL + DFGL++ D+ QT + + APE
Sbjct: 124 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 180
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
S ++DV++FG+++ + S
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYL 124
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 125 LYQMLXGIKHLH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPYV 179
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 180 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 124/293 (42%), Gaps = 45/293 (15%)
Query: 24 DFSKENLL---GEGGFGHVYKGELKDGQMIAAKVRK--EASTQGFAEFQSEVYVLNFARH 78
DF + N L E G ++KG + G I KV K + ST+ +F E L H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 79 KNIVMLLGFCCKENLN--ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRF 136
N++ +LG C L+ ++ SL+ L + T V++ Q A+ A+G+ F
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126
Query: 137 LHEECRGGPIIHR-DMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL---GYL 192
LH P+I R + ++++ D AR D + G + ++
Sbjct: 127 LHTL---EPLIPRHALNSRSVMIDEDMT--------ARISMADVKFSFQSPGRMYAPAWV 175
Query: 193 APEYAENGIVSIR---TDVYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLIEKL 247
APE + D+++F ++L +L++ R+V D++ E + K+
Sbjct: 176 APEALQKKPEDTNRRSADMWSFAVLLWELVT-REVPFADLSNME-----------IGMKV 223
Query: 248 ALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDR 300
AL E + P I + ++K +C+ +P RP +V +LE D+
Sbjct: 224 AL-EGLRPTIPPGISPH----VSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 31 LGEGGFGHVYKGELKDGQMIAAK----VRKEASTQGFA-EFQSEVYVLNFARHKNIVMLL 85
LG G FG V KG + +++ ++ EA+ E +E V+ + IV ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 86 GFCCKENLNILVYEYI----CNKSLHWHLFDNTESVLEW-HQRYAAAIGTAKGLRFLHEE 140
G C E+ +LV E NK L + ++++E HQ + G+++L E
Sbjct: 79 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ-------VSMGMKYLEE- 129
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD---PVQTKILGTLGYLAPEYA 197
+HRD+ N+LL + DFGL++ D+ QT + + APE
Sbjct: 130 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 186
Query: 198 ENGIVSIRTDVYAFGIILLQLMS 220
S ++DV++FG+++ + S
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 31 LGEGGFGHVYKG----ELKDGQMIAAKVRKEASTQGFAE-FQSEVYVLNFARHKNIVMLL 85
+GEG FG V++G +A K K ++ E F E + H +IV L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 86 GFCCKENLNILVYEYICNKSLHWHL----FD-NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
G EN ++ E L L F + S++ + + + A+ + RF
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF---- 132
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARW---KTTDDPVQTKILGTLGYLAPEYA 197
+HRD+ N+L++ + LGDFGL+R+ T + K+ + ++APE
Sbjct: 133 ------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL--PIKWMAPESI 184
Query: 198 ENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR 237
+ +DV+ FG+ + +++ M+G +P Q ++
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL-------MHGVKPFQGVK 217
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T ++ +++
Sbjct: 132 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV 187
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 188 -TRYYRAPEVILGMGYKEN------VDLWSVGCIMGEMVCHKILFPGRDYID 232
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 132 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPYV 186
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 187 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ Q+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 33/217 (15%)
Query: 27 KENLLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFAR-HKNIVML 84
+E++LGEG V L Q A K+ ++ + EV +L + H+N++ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 85 LGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIGTAKGLRFLHE 139
+ F +E+ LV+E + S+ H+ F+ E+ + A L FLH
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-------VVQDVASALDFLHN 129
Query: 140 ECRGGPIIHRDMRPSNILLTH--DFVPM-LGDFGLA---RWKTTDDPVQTKIL----GTL 189
+ I HRD++P NIL H P+ + DFGL + P+ T L G+
Sbjct: 130 K----GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 190 GYLAPEYA-----ENGIVSIRTDVYAFGIILLQLMSG 221
Y+APE E I R D+++ G+IL L+SG
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 35/227 (15%)
Query: 22 TGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARH--- 78
DF + +LG+G FG V K A + + + + SEV +L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 79 ----------KNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI 128
+N V + K++ + EY N++L+ + ++E++ + Y
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLI--HSENLNQQRDEYWRLF 122
Query: 129 -GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA----------RWKTT 177
+ L ++H + IIHRD++P NI + +GDFGLA + +
Sbjct: 123 RQILEALSYIHSQG----IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 178 DDPVQ----TKILGTLGYLAPEYAE-NGIVSIRTDVYAFGIILLQLM 219
+ P T +GT Y+A E + G + + D+Y+ GII +++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 31/219 (14%)
Query: 31 LGEGGFGHVYKG----ELKDGQMIAAKVRKEASTQGFAE-FQSEVYVLNFARHKNIVMLL 85
+GEG FG V++G +A K K ++ E F E + H +IV L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 86 GFCCKENLNILVYEYICNKSLHWHL----FD-NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
G EN ++ E L L F + S++ + + + A+ + RF
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF---- 512
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAE 198
+HRD+ N+L++ + LGDFGL+R+ D G L ++APE
Sbjct: 513 ------VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESIN 565
Query: 199 NGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR 237
+ +DV+ FG+ + +++ M+G +P Q ++
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL-------MHGVKPFQGVK 597
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLHSL 181
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENG 200
+I+RD++P N+L+ + DFG A K T + GT YLAPE +
Sbjct: 182 ----DLIYRDLKPENLLIDQQGYIQVTDFGFA--KRVKGATWT-LCGTPEYLAPEIILSK 234
Query: 201 IVSIRTDVYAFGIILLQLMSG 221
+ D +A G+++ ++ +G
Sbjct: 235 GYNKAVDWWALGVLIYEMAAG 255
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 132 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 186
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 187 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 24 DFSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIV 82
++ ++G G FG VY+ +L D G+++A K QG A E+ ++ H NIV
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 83 MLLGFCCKEN-------LNILVYEYICNK----SLHWHLFDNTESVLEWHQRYAAAIGTA 131
L F LN LV +Y+ + H+ T V+ + + Y +
Sbjct: 77 RLRYFFYSSGEKKDEVYLN-LVLDYVPATVYRVARHYSRAKQTLPVI-YVKLYMYQL--F 132
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLG 190
+ L ++H I HRD++P N+LL D + L DFG A+ +P + I
Sbjct: 133 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 191 YLAPEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
Y APE A + SI DV++ G +L +L+ G+ +
Sbjct: 188 YRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 132 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF-MMTPYV 186
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 187 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL 132
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 133 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 187
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 188 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 72 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL 130
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 131 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 185
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 186 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 231
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL 131
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 132 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 186
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 187 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 78 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL 136
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 137 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 191
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 192 VTRYYRAPEVILGMGYKEN------VDLWSVGCIMGEMVCHKILFPGRDYID 237
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL 132
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 133 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 187
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 188 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL 169
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 170 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 224
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 225 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F +++L YI + + +L + L+ H+R +
Sbjct: 67 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL 125
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 126 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 180
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 181 VTRYYRAPEVILGMGYKEN------VDLWSVGCIMGEMVCHKILFPGRDYID 226
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL 169
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 170 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 224
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 225 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL 125
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 126 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 180
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 181 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 31 LGEGGFGHVYKG----ELKDGQMIAAKVRKEASTQGFAE-FQSEVYVLNFARHKNIVMLL 85
+GEG FG V++G +A K K ++ E F E + H +IV L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 86 GFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGP 145
G EN ++ E L L V ++ A+ I A L
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLESKR 131
Query: 146 IIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVS 203
+HRD+ N+L++ + LGDFGL+R+ D G L ++APE +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 204 IRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR 237
+DV+ FG+ + +++ M+G +P Q ++
Sbjct: 191 SASDVWMFGVCMWEIL-------MHGVKPFQGVK 217
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGY 191
KG+ +LH + IIHRD++PSN+L+ D + DFG++ D + + +GT +
Sbjct: 148 KGIEYLHYQ----KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAF 203
Query: 192 LAPEYAENG--IVSIRT-DVYAFGIILLQLMSGR 222
+APE I S + DV+A G+ L + G+
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL 124
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 125 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 179
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 180 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAA-QIVLTFEYLH-- 153
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 154 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 202
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 203 EIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 46/243 (18%)
Query: 15 FSEIQQATGDFSKENLLGEGGFGHVY--KGELKDGQMIAAKVRKEASTQGFAEFQSEVYV 72
+ + Q + F E+ +GEG F VY +L+ G ++ T +E+
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 73 LNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
L A ++ VM + +C ++N +++ I L F + + L + + + K
Sbjct: 73 LTVAGGQDNVMGVKYCFRKNDHVV----IAMPYLEHESFLDILNSLSFQEVREYMLNLFK 128
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVP-MLGDFGLARWKTTDDPV---------- 181
L+ +H+ I+HRD++PSN L L DFGLA+ T D +
Sbjct: 129 ALKRIHQ----FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG-THDTKIELLKFVQSEA 183
Query: 182 ------QTKI-------------LGTLGYLAPEY---AENGIVSIRTDVYAFGIILLQLM 219
Q K GT G+ APE N +I D+++ G+I L L+
Sbjct: 184 QQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAI--DMWSAGVIFLSLL 241
Query: 220 SGR 222
SGR
Sbjct: 242 SGR 244
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 69 EVYVLNFARHKNIVMLLG-FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
E+ ++ HKNI+ LL F ++ L Y+ + + +L + L+ H+R +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL 125
Query: 128 I-GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL 186
+ G++ LH IIHRD++PSNI++ D + DFGLAR T + T +
Sbjct: 126 LYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYV 180
Query: 187 GTLGYLAPE------YAENGIVSIRTDVYAFGIILLQ------LMSGRKVVD 226
T Y APE Y EN D+++ G I+ + L GR +D
Sbjct: 181 VTRYYRAPEVILGMGYKEN------VDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 31 LGEGGFGHVYKGELKDGQ----MIAAKVRKEASTQGFAE-FQSEVYVLNFARHKNIVMLL 85
+GEG FG V++G + +A K K ++ E F E + H +IV L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 86 GFCCKENLNILVYEYICNKSLHWHLFDNTESV-LEWHQRYAAAIGTAKGLRFLHEECRGG 144
G EN ++ E L L S+ L YA + TA L +L +
Sbjct: 80 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLESK---- 132
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIV 202
+HRD+ N+L++ + LGDFGL+R+ D G L ++APE
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 203 SIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR 237
+ +DV+ FG+ + +++ M+G +P Q ++
Sbjct: 192 TSASDVWMFGVCMWEIL-------MHGVKPFQGVK 219
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 31 LGEGGFGHVYKGELKDGQ----MIAAKVRKEASTQGFAE-FQSEVYVLNFARHKNIVMLL 85
+GEG FG V++G + +A K K ++ E F E + H +IV L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 86 GFCCKENLNILVYEYICNKSLHWHLFDNTESV-LEWHQRYAAAIGTAKGLRFLHEECRGG 144
G EN ++ E L L S+ L YA + TA L +L +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLESK---- 130
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIV 202
+HRD+ N+L++ + LGDFGL+R+ D G L ++APE
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 203 SIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR 237
+ +DV+ FG+ + +++ M+G +P Q ++
Sbjct: 190 TSASDVWMFGVCMWEIL-------MHGVKPFQGVK 217
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 21/214 (9%)
Query: 31 LGEGGFGHVYKGELKDGQ----MIAAKVRKEASTQGFAE-FQSEVYVLNFARHKNIVMLL 85
+GEG FG V++G + +A K K ++ E F E + H +IV L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 86 GFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGP 145
G EN ++ E L L V ++ A+ I A L
Sbjct: 75 GVI-TENPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLESKR 128
Query: 146 IIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIVS 203
+HRD+ N+L++ + LGDFGL+R+ D G L ++APE +
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 204 IRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR 237
+DV+ FG+ + +++ M+G +P Q ++
Sbjct: 188 SASDVWMFGVCMWEIL-------MHGVKPFQGVK 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 31 LGEGGFGHVYKGELKDGQ----MIAAKVRKEASTQGFAE-FQSEVYVLNFARHKNIVMLL 85
+GEG FG V++G + +A K K ++ E F E + H +IV L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 86 GFCCKENLNILVYEYICNKSLHWHLFDNTESV-LEWHQRYAAAIGTAKGLRFLHEECRGG 144
G EN ++ E L L S+ L YA + TA L +L +
Sbjct: 83 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLESK---- 135
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIV 202
+HRD+ N+L++ + LGDFGL+R+ D G L ++APE
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRF 194
Query: 203 SIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR 237
+ +DV+ FG+ + +++ M+G +P Q ++
Sbjct: 195 TSASDVWMFGVCMWEIL-------MHGVKPFQGVK 222
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 31 LGEGGFGHVYKGELKDGQ----MIAAKVRKEASTQGFAE-FQSEVYVLNFARHKNIVMLL 85
+GEG FG V++G + +A K K ++ E F E + H +IV L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 86 GFCCKENLNILVYEYICNKSLHWHLFDNTESV-LEWHQRYAAAIGTAKGLRFLHEECRGG 144
G EN ++ E L L S+ L YA + TA L +L +
Sbjct: 81 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLESK---- 133
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIV 202
+HRD+ N+L++ + LGDFGL+R+ D G L ++APE
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRF 192
Query: 203 SIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR 237
+ +DV+ FG+ + +++ M+G +P Q ++
Sbjct: 193 TSASDVWMFGVCMWEIL-------MHGVKPFQGVK 220
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 29/212 (13%)
Query: 31 LGEGGFGHVYKGELK-DGQMIAAKVRKEA--STQGFAEFQSEVYVLNFARHKNIVMLLGF 87
+G G +G V + GQ +A K A E+ +L +H NI+ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 88 CCK-----ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
E ++ V + LH + + LE H RY +GL+++H
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE-HVRYFL-YQLLRGLKYMH---- 175
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQ-----TKILGTLGYLAPEYA 197
+IHRD++PSN+L+ + +GDFG+AR T P + T+ + T Y APE
Sbjct: 176 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT-SPAEHQYFMTEYVATRWYRAPEL- 233
Query: 198 ENGIVSIR-----TDVYAFGIILLQLMSGRKV 224
++S+ D+++ G I ++++ R++
Sbjct: 234 ---MLSLHEYTQAIDLWSVGCIFGEMLARRQL 262
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 35/272 (12%)
Query: 26 SKENLLGEGGFGHVYKGELKD-GQMIAAKV--RKEASTQGFAEFQSEVYVLNFARHKNIV 82
SKE LG G F V + K GQ AAK ++ AE E+ VL A+ V
Sbjct: 34 SKE--LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91
Query: 83 MLLGFCCKENLN--ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
+ L EN + IL+ EY + ++ + +G+ +LH+
Sbjct: 92 INLHEV-YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ- 149
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPM----LGDFGLARWKTTDDPVQTKILGTLGYLAPEY 196
I+H D++P NILL+ + P+ + DFG++R K +I+GT YLAPE
Sbjct: 150 ---NNIVHLDLKPQNILLSSIY-PLGDIKIVDFGMSR-KIGHACELREIMGTPEYLAPEI 204
Query: 197 AENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLALHELIDPR 256
++ TD++ GII L++ GE+ Q++ ++
Sbjct: 205 LNYDPITTATDMWNIGIIAYMLLT--HTSPFVGEDNQETYLNISQ-------------VN 249
Query: 257 IENSYDTYELYLMAKTAYL--CVQRNPEGRPS 286
++ S +T+ T ++ + +NPE RP+
Sbjct: 250 VDYSEETFSSVSQLATDFIQSLLVKNPEKRPT 281
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFAEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 31 LGEGGFGHVYKGELKDGQ----MIAAKVRKEASTQGFAE-FQSEVYVLNFARHKNIVMLL 85
+GEG FG V++G + +A K K ++ E F E + H +IV L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 86 GFCCKENLNILVYEYICNKSLHWHLFDNTESV-LEWHQRYAAAIGTAKGLRFLHEECRGG 144
G EN ++ E L L S+ L YA + TA L +L +
Sbjct: 106 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLESK---- 158
Query: 145 PIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAENGIV 202
+HRD+ N+L++ + LGDFGL+R+ D G L ++APE
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRF 217
Query: 203 SIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR 237
+ +DV+ FG+ + +++ M+G +P Q ++
Sbjct: 218 TSASDVWMFGVCMWEIL-------MHGVKPFQGVK 245
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 22/229 (9%)
Query: 4 ELYMKDPMKFSFSEIQQATG--DFSKENLLGEGGFGHVYKG--ELKDGQMIAAKVRKEAS 59
E + P S S AT + + LGEG +G VYK + + + ++R E
Sbjct: 13 EAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE 72
Query: 60 TQGFAEFQ-SEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVL 118
+G EV +L +H+NI+ L + L++EY N L ++ N + +
Sbjct: 73 EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSM 131
Query: 119 EWHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLT---HDFVPML--GDFGLAR 173
+ + + G+ F C +HRD++P N+LL+ P+L GDFGLAR
Sbjct: 132 RVIKSFLYQL--INGVNF----CHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
Query: 174 WKTTDDPVQ--TKILGTLGYLAPEYAENGI-VSIRTDVYAFGIILLQLM 219
P++ T + TL Y PE S D+++ I +++
Sbjct: 186 --AFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 29/212 (13%)
Query: 31 LGEGGFGHVYKGELK-DGQMIAAKVRKEA--STQGFAEFQSEVYVLNFARHKNIVMLLGF 87
+G G +G V + GQ +A K A E+ +L +H NI+ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 88 CCK-----ENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
E ++ V + LH + + LE H RY +GL+++H
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE-HVRYFL-YQLLRGLKYMH---- 176
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQ-----TKILGTLGYLAPEYA 197
+IHRD++PSN+L+ + +GDFG+AR T P + T+ + T Y APE
Sbjct: 177 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT-SPAEHQYFMTEYVATRWYRAPEL- 234
Query: 198 ENGIVSIR-----TDVYAFGIILLQLMSGRKV 224
++S+ D+++ G I ++++ R++
Sbjct: 235 ---MLSLHEYTQAIDLWSVGCIFGEMLARRQL 263
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAA-QIVLTFEYLHSL 181
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 182 ----DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 228
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 31/219 (14%)
Query: 31 LGEGGFGHVYKG----ELKDGQMIAAKVRKEASTQGFAE-FQSEVYVLNFARHKNIVMLL 85
+GEG FG V++G +A K K ++ E F E + H +IV L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 86 GFCCKENLNILVYEYICNKSLHWHL----FD-NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
G EN ++ E L L F + S++ + + + A+ + RF
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF---- 132
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAE 198
+HRD+ N+L++ LGDFGL+R+ D G L ++APE
Sbjct: 133 ------VHRDIAARNVLVSATDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESIN 185
Query: 199 NGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR 237
+ +DV+ FG+ + +++ M+G +P Q ++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL-------MHGVKPFQGVK 217
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 89
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 146
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 147 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 201
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 202 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 234
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 89
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 146
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 147 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 201
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 202 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 234
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 85
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 142
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 143 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 197
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 198 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 230
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 31/219 (14%)
Query: 31 LGEGGFGHVYKG----ELKDGQMIAAKVRKEASTQGFAE-FQSEVYVLNFARHKNIVMLL 85
+GEG FG V++G +A K K ++ E F E + H +IV L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 86 GFCCKENLNILVYEYICNKSLHWHL----FD-NTESVLEWHQRYAAAIGTAKGLRFLHEE 140
G EN ++ E L L F + S++ + + + A+ + RF
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF---- 512
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL--GYLAPEYAE 198
+HRD+ N+L++ LGDFGL+R+ D G L ++APE
Sbjct: 513 ------VHRDIAARNVLVSATDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESIN 565
Query: 199 NGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLR 237
+ +DV+ FG+ + +++ M+G +P Q ++
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL-------MHGVKPFQGVK 597
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA + E
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-----QIVLTFEY 156
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLXGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 159
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 208
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 111
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 168
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 169 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 223
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 224 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 256
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 81
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 138
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 139 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 193
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 194 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 226
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 77
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 134
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 135 LAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 190 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 222
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA + E
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-----QIVLTFEY 156
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLAGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 78
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 135
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 136 LAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 190
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 191 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 223
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 77
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 134
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 135 LAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 190 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 222
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 96
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 153
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 154 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 208
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 209 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 241
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 145
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 146 --SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 194
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 195 EIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 77
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 134
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 135 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 190 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 222
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 13/201 (6%)
Query: 25 FSKENLLGEGGFGHV-YKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 144
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENG 200
+I+RD++P N+L+ + DFG A K T + GT YLAPE +
Sbjct: 145 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFA--KRVKGRTWT-LCGTPEYLAPEIILSK 199
Query: 201 IVSIRTDVYAFGIILLQLMSG 221
+ D +A G+++ ++ +G
Sbjct: 200 GYNKAVDWWALGVLIYEMAAG 220
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 13/170 (7%)
Query: 20 QATGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQS---EVYVLNFA 76
+ ++ ++L+G G +G+VY K+ A + + + + E+ +LN
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 77 RHKNIVMLLGFCCKENL----NILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
+ I+ L E+L + + I + L LF + E H +
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLK-KLFKTPIFLTEQHVK-TILYNLLL 142
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQ 182
G +F+HE IIHRD++P+N LL D + DFGLAR +D +
Sbjct: 143 GEKFIHE----SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIH 188
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 13/201 (6%)
Query: 25 FSKENLLGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 159
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENG 200
+I+RD++P N+L+ + DFG A K T + GT YLAPE +
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFA--KRVKGRTWT-LCGTPEYLAPEIILSK 214
Query: 201 IVSIRTDVYAFGIILLQLMSG 221
+ D +A G+++ ++ +G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAA-QIVLTFEYLH-- 151
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 200
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTH---DFVPMLGDFGLARWKTTDDPVQTK 184
IGTA ++FLH I HRD++P N+L T D V L DFG A+ +TT + +QT
Sbjct: 118 IGTA--IQFLHSH----NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-ETTQNALQTP 170
Query: 185 ILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
T Y+APE D+++ G+I+ L+ G
Sbjct: 171 CY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 35/227 (15%)
Query: 22 TGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARH--- 78
DF + +LG+G FG V K A + + + + SEV +L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 79 ----------KNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI 128
+N V + K++ + EY N +L+ + ++E++ + Y
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI--HSENLNQQRDEYWRLF 122
Query: 129 -GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA----------RWKTT 177
+ L ++H + IIHRD++P NI + +GDFGLA + +
Sbjct: 123 RQILEALSYIHSQG----IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 178 DDPVQ----TKILGTLGYLAPEYAE-NGIVSIRTDVYAFGIILLQLM 219
+ P T +GT Y+A E + G + + D+Y+ GII +++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHV-YKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKNIVMLLG- 86
+G G +G V + + G+ +A K+ + ++ FA+ E+ +L +H+N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPI 146
F +L Y+ + L + KGL+++H +
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH----SAGV 165
Query: 147 IHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRT 206
+HRD++P N+ + D + DFGLAR D T + T Y APE + + +T
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLARHA---DAEMTGYVVTRWYRAPEVILSWMHYNQT 222
Query: 207 -DVYAFGIILLQLMSGRKV 224
D+++ G I+ ++++G+ +
Sbjct: 223 VDIWSVGCIMAEMLTGKTL 241
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 105
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 162
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 163 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 217
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 218 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 250
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTH---DFVPMLGDFGLARWKTTDDPVQTK 184
IGTA ++FLH I HRD++P N+L T D V L DFG A+ +TT + +QT
Sbjct: 137 IGTA--IQFLHSH----NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-ETTQNALQTP 189
Query: 185 ILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
T Y+APE D+++ G+I+ L+ G
Sbjct: 190 CY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 111
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 168
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 169 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 223
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 224 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 256
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 90
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 147
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 148 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 202
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 203 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 235
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 156
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 213
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 214 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 268
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 269 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 301
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 31 LGEGGFGHVYKG-ELKDGQMIA-AKVRKEASTQGFAEFQ-SEVYVLNFARHKNIVMLLG- 86
+G G +G V + + G+ +A K+ + ++ FA+ E+ +L +H+N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPI 146
F +L Y+ + L + KGL+++H +
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH----SAGV 147
Query: 147 IHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRT 206
+HRD++P N+ + D + DFGLAR D T + T Y APE + + +T
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLARHA---DAEMTGYVVTRWYRAPEVILSWMHYNQT 204
Query: 207 -DVYAFGIILLQLMSGRKV 224
D+++ G I+ ++++G+ +
Sbjct: 205 VDIWSVGCIMAEMLTGKTL 223
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 113
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 170
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 171 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 225
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 226 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 258
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 77
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 134
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 135 LAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 189
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 190 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 222
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 146 IIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGI---- 201
I+HRD++P NILL D L DFG + + +++ + GT YLAPE E +
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS-VCGTPSYLAPEIIECSMNDNH 203
Query: 202 --VSIRTDVYAFGIILLQLMSG 221
D+++ G+I+ L++G
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAA-QIVLTFEYLH-- 159
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 208
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 115
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 172
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 173 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 227
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 228 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 260
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+++ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
++ ++G G FG VY+ +L D G+++A ++K + F E+ ++ H NIV
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFK--NRELQIMRKLDHCNIVR 82
Query: 84 LLGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
L F LN++ V E + + H+ T V+ + + Y + +
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRS 139
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYL 192
L ++H I HRD++P N+LL D + L DFG A+ +P + I Y
Sbjct: 140 LAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 194
Query: 193 APEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
APE A + SI DV++ G +L +L+ G+ +
Sbjct: 195 APELIFGATDYTSSI--DVWSAGCVLAELLLGQPI 227
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVML 84
++ ++G G FG V++ +L + +A ++K + F E+ ++ +H N+V L
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVA--IKKVLQDKRFK--NRELQIMRIVKHPNVVDL 97
Query: 85 LGFCCKEN-------LNIL---VYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGL 134
F LN++ V E + S H+ T +L + Y + + L
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML-LIKLYMYQL--LRSL 154
Query: 135 RFLHEECRGGPIIHRDMRPSNILL-THDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLA 193
++H I HRD++P N+LL V L DFG A+ +P + I Y A
Sbjct: 155 AYIHSIG----ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-YRA 209
Query: 194 PEY---AENGIVSIRTDVYAFGIILLQLMSGRKV 224
PE A N +I D+++ G ++ +LM G+ +
Sbjct: 210 PELIFGATNYTTNI--DIWSTGCVMAELMQGQPL 241
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 151
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 200
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 146 IIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQT--KILGTLGYLAPEYAENGI-- 201
I+HRD++P NILL D L DFG + DP + ++ GT YLAPE E +
Sbjct: 132 IVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLREVCGTPSYLAPEIIECSMND 188
Query: 202 ----VSIRTDVYAFGIILLQLMSG 221
D+++ G+I+ L++G
Sbjct: 189 NHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHV-YKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 146 IIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQT--KILGTLGYLAPEYAENGI-- 201
I+HRD++P NILL D L DFG + DP + ++ GT YLAPE E +
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLREVCGTPSYLAPEIIECSMND 201
Query: 202 ----VSIRTDVYAFGIILLQLMSG 221
D+++ G+I+ L++G
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 159
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 208
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 159
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 208
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 159
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 208
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLHSL 181
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 182 ----DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 228
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 28/219 (12%)
Query: 18 IQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAAK--------VRKEASTQGFAEFQSE 69
+Q D+ ++G G FG V K Q + A +++ S A F E
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS----AFFWEE 125
Query: 70 VYVLNFARHKNIVMLLGFCCKENLNIL--VYEYICNKSLHWHLFDNTESVLEWHQRYAAA 127
++ FA +V L FC ++ L V EY+ L +L N + +W + Y A
Sbjct: 126 RDIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLV-NLMSNYDVPEKWAKFYTAE 182
Query: 128 IGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI-L 186
+ A L +H +IHRD++P N+LL L DFG V +
Sbjct: 183 VVLA--LDAIHSMG----LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV 236
Query: 187 GTLGYLAPEYAE----NGIVSIRTDVYAFGIILLQLMSG 221
GT Y++PE + +G D ++ G+ L +++ G
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 159
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 208
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 33/217 (15%)
Query: 27 KENLLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFAR-HKNIVML 84
+E++LGEG V L Q A K+ ++ + EV +L + H+N++ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 85 LGFCCKENLNILVYEYICNKSLHWHL-----FDNTESVLEWHQRYAAAIGTAKGLRFLHE 139
+ F +E+ LV+E + S+ H+ F+ E+ + A L FLH
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-------VVQDVASALDFLHN 129
Query: 140 ECRGGPIIHRDMRPSNILLTH--DFVPM-LGDFGLA---RWKTTDDPVQTKIL----GTL 189
+ I HRD++P NIL H P+ + DF L + P+ T L G+
Sbjct: 130 K----GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 190 GYLAPEYA-----ENGIVSIRTDVYAFGIILLQLMSG 221
Y+APE E I R D+++ G+IL L+SG
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHV-YKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + E + + + N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+++ + DFGLA+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 118/293 (40%), Gaps = 45/293 (15%)
Query: 24 DFSKENLL---GEGGFGHVYKGELKDGQMIAAKVRK--EASTQGFAEFQSEVYVLNFARH 78
DF + N L E G ++KG + G I KV K + ST+ +F E L H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 79 KNIVMLLGFCCKENLN--ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRF 136
N++ +LG C L+ + SL+ L + T V++ Q A+ A+G F
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAF 126
Query: 137 LHEECRGGPIIHR-DMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILG---TLGYL 192
LH P+I R + ++ + D AR D + G ++
Sbjct: 127 LHTL---EPLIPRHALNSRSVXIDEDXT--------ARISXADVKFSFQSPGRXYAPAWV 175
Query: 193 APEYAENGIVSIR---TDVYAFGIILLQLMSGRKV--VDMNGEEPQQSLRQWAEPLIEKL 247
APE + D ++F ++L +L++ R+V D++ E + K+
Sbjct: 176 APEALQKKPEDTNRRSADXWSFAVLLWELVT-REVPFADLSNXE-----------IGXKV 223
Query: 248 ALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVRLLEGENDR 300
AL E + P I + ++K +C +P RP +V +LE D+
Sbjct: 224 AL-EGLRPTIPPGISPH----VSKLXKICXNEDPAKRPKFDXIVPILEKXQDK 271
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHV-YKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + E + + + N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+++ + DFGLA+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 31/210 (14%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ Q + + + LN R + V
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKI---LDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 84 L-----LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFL 137
L F K+N N+ +V EY + HL E H R+ AA +L
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYL 158
Query: 138 HEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGY 191
H +I+RD++P N+L+ + DFG A+ W + GT Y
Sbjct: 159 H----SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW---------XLCGTPEY 205
Query: 192 LAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
LAPE + + D +A G+++ ++ +G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 14/200 (7%)
Query: 31 LGEGGFGHVYKGELKDGQ-MIAAKVRKEASTQGFAEFQS---EVYVLNFARHKNIVMLLG 86
+G+G FG V + D + M A K + E ++ E+ ++ H +V L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 87 FCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECRGGPI 146
E +V + + L +HL N E + + + A L +L + I
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMA--LDYLQNQ----RI 136
Query: 147 IHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAEN---GIVS 203
IHRDM+P NILL + DF +A + + T + GT Y+APE + S
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI-TTMAGTKPYMAPEMFSSRKGAGYS 195
Query: 204 IRTDVYAFGIILLQLMSGRK 223
D ++ G+ +L+ GR+
Sbjct: 196 FAVDWWSLGVTAYELLRGRR 215
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L + K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 19/99 (19%)
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLARWKTTDDPVQTKILGTL 189
+++LHE IIHRD++P N+LL+ D + + DFG ++ ++T + GT
Sbjct: 126 AVQYLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTP 180
Query: 190 GYLAPEYAENGIVSIRT-------DVYAFGIILLQLMSG 221
YLAPE +VS+ T D ++ G+IL +SG
Sbjct: 181 TYLAPEV----LVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHV-YKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + +G G FG V ++ G A K+ + + + + + N
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 19/99 (19%)
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLARWKTTDDPVQTKILGTL 189
+++LHE IIHRD++P N+LL+ D + + DFG ++ ++T + GT
Sbjct: 125 AVQYLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTP 179
Query: 190 GYLAPEYAENGIVSIRT-------DVYAFGIILLQLMSG 221
YLAPE +VS+ T D ++ G+IL +SG
Sbjct: 180 TYLAPEV----LVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L + K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L + K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 19/99 (19%)
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLARWKTTDDPVQTKILGTL 189
+++LHE IIHRD++P N+LL+ D + + DFG ++ ++T + GT
Sbjct: 126 AVQYLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTP 180
Query: 190 GYLAPEYAENGIVSIRT-------DVYAFGIILLQLMSG 221
YLAPE +VS+ T D ++ G+IL +SG
Sbjct: 181 TYLAPEV----LVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 19/99 (19%)
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLARWKTTDDPVQTKILGTL 189
+++LHE IIHRD++P N+LL+ D + + DFG ++ ++T + GT
Sbjct: 126 AVQYLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTP 180
Query: 190 GYLAPEYAENGIVSIRT-------DVYAFGIILLQLMSG 221
YLAPE +VS+ T D ++ G+IL +SG
Sbjct: 181 TYLAPEV----LVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 89/212 (41%), Gaps = 26/212 (12%)
Query: 29 NLLGEGGFGHVYKGE-LKDGQMIAAKVRKEASTQGFAEFQ-SEVYVLNFARHKNIVMLLG 86
++LG+G +V++G K G + A KV S + Q E VL HKNIV L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL-- 72
Query: 87 FCCKENLN----ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI-GTAKGLRFLHEEC 141
F +E +L+ E+ SL+ L + + + + + G+ L E
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 142 RGGPIIHRDMRPSNILLT----HDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYA 197
I+HR+++P NI+ V L DFG AR + DD + GT YL P+
Sbjct: 133 ----IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR-ELEDDEQFVSLYGTEEYLHPDMY 187
Query: 198 ENGIV--------SIRTDVYAFGIILLQLMSG 221
E ++ D+++ G+ +G
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 19/99 (19%)
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLARWKTTDDPVQTKILGTL 189
+++LHE IIHRD++P N+LL+ D + + DFG ++ ++T + GT
Sbjct: 132 AVQYLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTP 186
Query: 190 GYLAPEYAENGIVSIRT-------DVYAFGIILLQLMSG 221
YLAPE +VS+ T D ++ G+IL +SG
Sbjct: 187 TYLAPEV----LVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 19/99 (19%)
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLARWKTTDDPVQTKILGTL 189
+++LHE IIHRD++P N+LL+ D + + DFG ++ ++T + GT
Sbjct: 265 AVQYLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTP 319
Query: 190 GYLAPEYAENGIVSIRT-------DVYAFGIILLQLMSG 221
YLAPE +VS+ T D ++ G+IL +SG
Sbjct: 320 TYLAPEV----LVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
+ + D +A G+++ ++ +G
Sbjct: 208 AIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + +G G FG V ++ G A K+ + + + + + N
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 19/99 (19%)
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLT---HDFVPMLGDFGLARWKTTDDPVQTKILGTL 189
+++LHE IIHRD++P N+LL+ D + + DFG ++ ++T + GT
Sbjct: 251 AVQYLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTP 305
Query: 190 GYLAPEYAENGIVSIRT-------DVYAFGIILLQLMSG 221
YLAPE +VS+ T D ++ G+IL +SG
Sbjct: 306 TYLAPEV----LVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Query: 72 VLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHW-HLFDNTESVLEWHQRYAAAI-- 128
+L + +H NI+ L K+ + Y Y+ + + L D + +R A+A+
Sbjct: 69 LLRYGQHPNIITL-----KDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLF 123
Query: 129 GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDF----VPMLGDFGLARWKTTDDPVQTK 184
K + +LH + ++HRD++PSNIL + + DFG A+ ++ +
Sbjct: 124 TITKTVEYLHAQG----VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179
Query: 185 ILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
T ++APE E D+++ G++L +++G
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 89/212 (41%), Gaps = 26/212 (12%)
Query: 29 NLLGEGGFGHVYKGE-LKDGQMIAAKVRKEASTQGFAEFQ-SEVYVLNFARHKNIVMLLG 86
++LG+G +V++G K G + A KV S + Q E VL HKNIV L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL-- 72
Query: 87 FCCKENLN----ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI-GTAKGLRFLHEEC 141
F +E +L+ E+ SL+ L + + + + + G+ L E
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 142 RGGPIIHRDMRPSNILLT----HDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYA 197
I+HR+++P NI+ V L DFG AR + DD + GT YL P+
Sbjct: 133 ----IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR-ELEDDEQFVXLYGTEEYLHPDMY 187
Query: 198 ENGIV--------SIRTDVYAFGIILLQLMSG 221
E ++ D+++ G+ +G
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + +G G FG V ++ G A K+ + + + + + N
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 25/213 (11%)
Query: 24 DFSKENLLGEGGFGHVYKGELKDGQMIAA-------KVRKEASTQGFAEFQSEVYVLNFA 76
DF ++G G FG V +LK+ + A ++ K A T A F+ E VL
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAET---ACFREERDVLVNG 131
Query: 77 RHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRY--AAAIGTAKGL 134
K I L +N LV +Y L L + + E R+ A + +
Sbjct: 132 DSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV 191
Query: 135 RFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI-LGTLGYLA 193
LH +HRD++P NIL+ + L DFG D VQ+ + +GT Y++
Sbjct: 192 HQLH-------YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYIS 244
Query: 194 PEYAE-----NGIVSIRTDVYAFGIILLQLMSG 221
PE + G D ++ G+ + +++ G
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 19/164 (11%)
Query: 63 FAEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSL-----HWHLFDNTESV 117
+ +F++E+ ++ +++ + G + ++YEY+ N S+ ++ + D +
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 118 LEWHQRYAAAIGTA-KGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKT 176
Q I + ++H E I HRD++PSNIL+ + L DFG + +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNE---KNICHRDVKPSNILMDKNGRVKLSDFGESEY-- 201
Query: 177 TDDPVQTKILGTLG---YLAPEY--AENGIVSIRTDVYAFGIIL 215
V KI G+ G ++ PE+ E+ + D+++ GI L
Sbjct: 202 ---MVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 35/227 (15%)
Query: 22 TGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARH--- 78
DF + +LG+G FG V K A + + + + SEV +L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYV 64
Query: 79 ----------KNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI 128
+N V K++ + EY N++L+ + ++E++ + Y
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLI--HSENLNQQRDEYWRLF 122
Query: 129 -GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLA----------RWKTT 177
+ L ++H + IIHR+++P NI + +GDFGLA + +
Sbjct: 123 RQILEALSYIHSQG----IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 178 DDPVQ----TKILGTLGYLAPEYAE-NGIVSIRTDVYAFGIILLQLM 219
+ P T +GT Y+A E + G + + D Y+ GII + +
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY+ + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+L+ + DFG A+ W + GT LAP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEALAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 16/214 (7%)
Query: 17 EIQQATGDFSKENLLGEGGFGHV----YKGELKDGQMIAAKVRKEASTQGFAEFQSEVYV 72
+++ D+ ++G G FG V +K K M + A F E +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 73 LNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
+ FA +V L + +V EY+ L +L N + +W + Y A + A
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLA- 185
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI-LGTLGY 191
L +H IHRD++P N+LL L DFG + V+ +GT Y
Sbjct: 186 -LDAIHSMG----FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 240
Query: 192 LAPEYAE----NGIVSIRTDVYAFGIILLQLMSG 221
++PE + +G D ++ G+ L +++ G
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 31/230 (13%)
Query: 10 PMKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-------KVRKEASTQG 62
P E+Q DF ++G G FG V ++K+ + I A ++ K A T
Sbjct: 77 PFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET-- 134
Query: 63 FAEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQ 122
A F+ E VL + I L EN LV +Y L L + + E
Sbjct: 135 -ACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA 193
Query: 123 RY-----AAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTT 177
R+ AI + L + +HRD++P N+LL + L DFG
Sbjct: 194 RFYIGEMVLAIDSIHQLHY----------VHRDIKPDNVLLDVNGHIRLADFGSCLKMND 243
Query: 178 DDPVQTKI-LGTLGYLAPEYAEN-----GIVSIRTDVYAFGIILLQLMSG 221
D VQ+ + +GT Y++PE + G D ++ G+ + +++ G
Sbjct: 244 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 30/244 (12%)
Query: 31 LGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM---LLG 86
LG GG G V+ D + +A K Q E+ ++ H NIV +LG
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 87 FCCKE------NLNILVYEYICNKSLHWHLFDNTES--VLEWHQRYAAAIGTAKGLRFLH 138
+ +L L YI + + L + E +LE H R +GL+++H
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFM-YQLLRGLKYIH 137
Query: 139 EECRGGPIIHRDMRPSNILL-THDFVPMLGDFGLARWKTTDDPVQ------TKILGTLGY 191
++HRD++P+N+ + T D V +GDFGLAR DP ++ L T Y
Sbjct: 138 ----SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM---DPHYSHKGHLSEGLVTKWY 190
Query: 192 LAPE--YAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQWAEPLIEKLAL 249
+P + N D++A G I ++++G+ + E Q L + P++ +
Sbjct: 191 RSPRLLLSPNNYTK-AIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDR 249
Query: 250 HELI 253
EL+
Sbjct: 250 QELL 253
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 16/214 (7%)
Query: 17 EIQQATGDFSKENLLGEGGFGHV----YKGELKDGQMIAAKVRKEASTQGFAEFQSEVYV 72
+++ D+ ++G G FG V +K K M + A F E +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 73 LNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
+ FA +V L + +V EY+ L +L N + +W + Y A + A
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLA- 185
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI-LGTLGY 191
L +H IHRD++P N+LL L DFG + V+ +GT Y
Sbjct: 186 -LDAIHSMG----FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 240
Query: 192 LAPEYAE----NGIVSIRTDVYAFGIILLQLMSG 221
++PE + +G D ++ G+ L +++ G
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY + HL E H R+ AA +LH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFXEPHARFYAA-QIVLTFEYLH-- 159
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+++ + DFG A+ W + GT YLAP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW---------XLCGTPEYLAP 208
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 31/230 (13%)
Query: 10 PMKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKDGQMIAA-------KVRKEASTQG 62
P E+Q DF ++G G FG V ++K+ + I A ++ K A T
Sbjct: 61 PFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET-- 118
Query: 63 FAEFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQ 122
A F+ E VL + I L EN LV +Y L L + + E
Sbjct: 119 -ACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA 177
Query: 123 RY-----AAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTT 177
R+ AI + L + +HRD++P N+LL + L DFG
Sbjct: 178 RFYIGEMVLAIDSIHQLHY----------VHRDIKPDNVLLDVNGHIRLADFGSCLKMND 227
Query: 178 DDPVQTKI-LGTLGYLAPEYAEN-----GIVSIRTDVYAFGIILLQLMSG 221
D VQ+ + +GT Y++PE + G D ++ G+ + +++ G
Sbjct: 228 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V + K+ G A K+ + + + + + N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY + HL E H R+ AA +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 159
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+++ + DFG A+ W + GT YLAP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW---------XLCGTPEYLAP 208
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 16/214 (7%)
Query: 17 EIQQATGDFSKENLLGEGGFGHV----YKGELKDGQMIAAKVRKEASTQGFAEFQSEVYV 72
+++ D+ ++G G FG V +K K M + A F E +
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 73 LNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
+ FA +V L + +V EY+ L +L N + +W + Y A + A
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLA- 180
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKI-LGTLGY 191
L +H IHRD++P N+LL L DFG + V+ +GT Y
Sbjct: 181 -LDAIHSMG----FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 235
Query: 192 LAPEYAE----NGIVSIRTDVYAFGIILLQLMSG 221
++PE + +G D ++ G+ L +++ G
Sbjct: 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHV-YKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFXEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+++ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+++ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 20 QATGDFSKENLLGEGGFGHVYKGELK-DGQMIAAK--VRKEASTQGFAEFQSEVYVLNFA 76
Q + +L+G G +GHV + K + +++A K +R E+ +LN
Sbjct: 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL 109
Query: 77 RHKNIVMLLGFCCKENLNILVYEYIC---NKSLHWHLFDNTESVLEWHQRYAAAIGTAKG 133
H ++V +L +++ Y+ S LF + E H + G
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIK-TLLYNLLVG 168
Query: 134 LRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDP 180
++++H I+HRD++P+N L+ D + DFGLAR T D P
Sbjct: 169 VKYVH----SAGILHRDLKPANCLVNQDCSVKVCDFGLAR--TVDYP 209
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY + HL E H R+ AA +LH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 159
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+++ + DFG A+ W + GT YLAP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW---------XLCGTPEYLAP 208
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY + HL E H R+ AA +LH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 159
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+++ + DFG A+ W + GT YLAP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW---------XLCGTPEYLAP 208
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 126/297 (42%), Gaps = 68/297 (22%)
Query: 25 FSKENLLGEGGFGH-VYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFA-RHKNIV 82
F +++LG G G VY+G + + ++ E F+ EV +L + H N++
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC----FSFADREVQLLRESDEHPNVI 81
Query: 83 MLLGFCCKENLNILVYEYI----CNKSLHWHLFDNTESVLEWHQRYAAAIG--------- 129
FC +++ ++YI C +L ++ Q+ A +G
Sbjct: 82 RY--FCTEKDRQ---FQYIAIELCAATLQEYV----------EQKDFAHLGLEPITLLQQ 126
Query: 130 TAKGLRFLHEECRGGPIIHRDMRPSNILLTH-----DFVPMLGDFGLARWKTTDD---PV 181
T GL LH I+HRD++P NIL++ M+ DFGL +
Sbjct: 127 TTSGLAHLH----SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR 182
Query: 182 QTKILGTLGYLAPEY-----AENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEP-QQS 235
++ + GT G++APE EN ++ D+++ G + ++S G P +S
Sbjct: 183 RSGVPGTEGWIAPEMLSEDCKENPTYTV--DIFSAGCVFYYVIS-------EGSHPFGKS 233
Query: 236 LRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVR 292
L++ A L+ +L + + P E D L+ K + +P+ RPS V++
Sbjct: 234 LQRQANILLGACSL-DCLHP--EKHEDVIARELIEKM----IAMDPQKRPSAKHVLK 283
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 96/223 (43%), Gaps = 22/223 (9%)
Query: 24 DFSKENLLGEGGFGHVYKGELK-DGQMIAAKVRKEASTQG-------FAEFQSEVYVLNF 75
F + + LG G +G V+K K DG++ A K R + +G AE S V
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVK-RSMSPFRGPKDRARKLAEVGSHEKV--- 113
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLR 135
+H V L +E + + +C SL H S+ E Q + T L
Sbjct: 114 GQHPCCVRLEQ-AWEEGGILYLQTELCGPSLQQHCEAWGASLPE-AQVWGYLRDTLLALA 171
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPE 195
LH + ++H D++P+NI L LGDFGL T + + G Y+APE
Sbjct: 172 HLHSQG----LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE-GDPRYMAPE 226
Query: 196 YAENGIVSIRTDVYAFGIILLQLMSGRKVVDMNGEEPQQSLRQ 238
+ G DV++ G+ +L++ ++ +G E Q LRQ
Sbjct: 227 LLQ-GSYGTAADVFSLGLTILEVACNMELP--HGGEGWQQLRQ 266
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 25 FSKENLLGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQSEVYVLNFARHKNIVM 83
F + LG G FG V ++ G A K+ + + + + + N
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 84 L--LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEE 140
L L F K+N N+ +V EY + HL E H R+ AA +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAA-QIVLTFEYLH-- 158
Query: 141 CRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAR------WKTTDDPVQTKILGTLGYLAP 194
+I+RD++P N+++ + DFG A+ W + GT YLAP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW---------XLCGTPEYLAP 207
Query: 195 EYAENGIVSIRTDVYAFGIILLQLMSG 221
E + + D +A G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 30 LLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQS---EVYVLNFARHKNIVMLLG 86
L+G G +G+VY K+ + A + + + + E+ +LN + I+ L
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 87 FCCKENL----NILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLHEECR 142
++L + + I + L LF + E H + G F+HE
Sbjct: 93 LIIPDDLLKFDELYIVLEIADSDLK-KLFKTPIFLTEEHIK-TILYNLLLGENFIHE--- 147
Query: 143 GGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTL 189
IIHRD++P+N LL D + DFGLAR T + T I+ L
Sbjct: 148 -SGIIHRDLKPANCLLNQDCSVKVCDFGLAR--TINSEKDTNIVNDL 191
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 72 VLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHW-HLFDNTESVLEWHQRYAAAI-- 128
+L + +H NI+ L K+ + Y Y+ + L D + +R A+A+
Sbjct: 69 LLRYGQHPNIITL-----KDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLF 123
Query: 129 GTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDF----VPMLGDFGLARWKTTDDPVQTK 184
K + +LH + ++HRD++PSNIL + + DFG A+ ++ +
Sbjct: 124 TITKTVEYLHAQG----VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT 179
Query: 185 ILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
T ++APE E D+++ G++L ++G
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 5 LYMKDPMKFSFSEIQQATGDFSKENLLGEGGFGHVYKGELKD-GQMIAAKVRKEASTQGF 63
L +P+ E++ DF ++G G F V ++K GQ+ A K+ +
Sbjct: 43 LQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR 102
Query: 64 AE---FQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESV-LE 119
E F+ E VL + I L EN LV EY L L E + E
Sbjct: 103 GEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAE 162
Query: 120 WHQRYAAAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDD 179
+ Y A I A + +H R G +HRD++P NILL L DFG D
Sbjct: 163 MARFYLAEIVMA--IDSVH---RLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG 216
Query: 180 PVQTKI-LGTLGYLAPE 195
V++ + +GT YL+PE
Sbjct: 217 TVRSLVAVGTPDYLSPE 233
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 72 VLNFARHKNIVMLLGFCCKENLNILVYEY-----ICNKSLHWHLFDNTESVLEWHQRYAA 126
+L + +H NI+ L LV E + +K L F E+ H
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH----- 128
Query: 127 AIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDF----VPMLGDFGLARWKTTDDPVQ 182
IG K + +LH + ++HRD++PSNIL + + DFG A+ ++ +
Sbjct: 129 TIG--KTVEYLHSQG----VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 183 TKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
T ++APE + D+++ GI+L +++G
Sbjct: 183 MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 72 VLNFARHKNIVMLLGFCCKENLNILVYEY-----ICNKSLHWHLFDNTESVLEWHQRYAA 126
+L + +H NI+ L LV E + +K L F E+ H
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH----- 128
Query: 127 AIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDF----VPMLGDFGLARWKTTDDPVQ 182
IG K + +LH + ++HRD++PSNIL + + DFG A+ ++ +
Sbjct: 129 TIG--KTVEYLHSQG----VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 183 TKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
T ++APE + D+++ GI+L +++G
Sbjct: 183 MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 18/206 (8%)
Query: 25 FSKENLLGEGGFGHVYKG--ELKDGQMIAAKVRKEASTQG-------FAEFQSEVYVLNF 75
+S + LG G FG V+ + K+ +++ ++KE + + E+ +L+
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 76 ARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYA-AAIGTAKGL 134
H NI+ +L + LV E + + D + E Y + +A G
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 135 RFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAP 194
L + IIHRD++ NI++ DF L DFG A + T GT+ Y AP
Sbjct: 146 LRLKD------IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-FCGTIEYCAP 198
Query: 195 EY-AENGIVSIRTDVYAFGIILLQLM 219
E N ++++ G+ L L+
Sbjct: 199 EVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 43/203 (21%)
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYL 192
GL LHE ++HRD+ P NILL + + DF LAR + T D +T + Y
Sbjct: 146 GLHVLHE----AGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADANKTHYVTHRWYR 200
Query: 193 APEYAEN--GIVSIRTDVYAFGIILLQLMSGR-------------KVVDMNGEEPQQSLR 237
APE G + D+++ G ++ ++ + + K+V++ G + +
Sbjct: 201 APELVMQFKGFTKL-VDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVV 259
Query: 238 QWAEPLIEKLALHELID------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
++ P + L + + + D L L+AK ++ NP+ R S + +
Sbjct: 260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAK----MLEFNPQRRISTEQAL 315
Query: 292 R------------LLEGENDRFH 302
R L EG ++RFH
Sbjct: 316 RHPYFESLFDPLDLTEGLSERFH 338
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 43/203 (21%)
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYL 192
GL LHE ++HRD+ P NILL + + DF LAR + T D +T + Y
Sbjct: 146 GLHVLHE----AGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADANKTHYVTHRWYR 200
Query: 193 APEYAEN--GIVSIRTDVYAFGIILLQLMSGR-------------KVVDMNGEEPQQSLR 237
APE G + D+++ G ++ ++ + + K+V++ G + +
Sbjct: 201 APELVMQFKGFTKL-VDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVV 259
Query: 238 QWAEPLIEKLALHELID------PRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVV 291
++ P + L + + + D L L+AK ++ NP+ R S + +
Sbjct: 260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAK----MLEFNPQRRISTEQAL 315
Query: 292 R------------LLEGENDRFH 302
R L EG ++RFH
Sbjct: 316 RHPYFESLFDPLDLTEGLSERFH 338
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 122 QRYAAAIGTAKG--LRFLHEECRGGPIIHRDMRPSNILLTH---DFVPMLGDFGLARWKT 176
+R A+ I + G +++LH I HRD++P N+L T + + L DFG A+ T
Sbjct: 166 EREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 221
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+ + + T T Y+APE D+++ G+I+ L+ G
Sbjct: 222 SHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 122 QRYAAAIGTAKG--LRFLHEECRGGPIIHRDMRPSNILLTH---DFVPMLGDFGLARWKT 176
+R A+ I + G +++LH I HRD++P N+L T + + L DFG A+ T
Sbjct: 116 EREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+ + + T T Y+APE D+++ G+I+ L+ G
Sbjct: 172 SHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 122 QRYAAAIGTAKG--LRFLHEECRGGPIIHRDMRPSNILLTH---DFVPMLGDFGLARWKT 176
+R A+ I + G +++LH I HRD++P N+L T + + L DFG A+ T
Sbjct: 121 EREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 176
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+ + + T T Y+APE D+++ G+I+ L+ G
Sbjct: 177 SHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 122 QRYAAAIGTAKG--LRFLHEECRGGPIIHRDMRPSNILLTH---DFVPMLGDFGLARWKT 176
+R A+ I + G +++LH I HRD++P N+L T + + L DFG A+ T
Sbjct: 116 EREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+ + + T T Y+APE D+++ G+I+ L+ G
Sbjct: 172 SHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 122 QRYAAAIGTAKG--LRFLHEECRGGPIIHRDMRPSNILLTH---DFVPMLGDFGLARWKT 176
+R A+ I + G +++LH I HRD++P N+L T + + L DFG A+ T
Sbjct: 160 EREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+ + + T T Y+APE D+++ G+I+ L+ G
Sbjct: 216 SHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 122 QRYAAAIGTAKG--LRFLHEECRGGPIIHRDMRPSNILLTH---DFVPMLGDFGLARWKT 176
+R A+ I + G +++LH I HRD++P N+L T + + L DFG A+ T
Sbjct: 115 EREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 170
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+ + + T T Y+APE D+++ G+I+ L+ G
Sbjct: 171 SHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 146 IIHRDMRPSNILLTH---DFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIV 202
I HRD++P N+L T + + L DFG A+ T+ + + T T Y+APE
Sbjct: 152 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-TPYYVAPEVLGPEKY 210
Query: 203 SIRTDVYAFGIILLQLMSG 221
D+++ G+I+ L+ G
Sbjct: 211 DKSCDMWSLGVIMYILLCG 229
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 146 IIHRDMRPSNILLTH---DFVPMLGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIV 202
I HRD++P N+L T + + L DFG A+ T+ + + T T Y+APE
Sbjct: 144 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-TPYYVAPEVLGPEKY 202
Query: 203 SIRTDVYAFGIILLQLMSG 221
D+++ G+I+ L+ G
Sbjct: 203 DKSCDMWSLGVIMYILLCG 221
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 122 QRYAAAIGTAKG--LRFLHEECRGGPIIHRDMRPSNILLTH---DFVPMLGDFGLARWKT 176
+R A+ I + G +++LH I HRD++P N+L T + + L DFG A+ T
Sbjct: 120 EREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 175
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+ + + T T Y+APE D+++ G+I+ L+ G
Sbjct: 176 SHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 122 QRYAAAIGTAKG--LRFLHEECRGGPIIHRDMRPSNILLTH---DFVPMLGDFGLARWKT 176
+R A+ I + G +++LH I HRD++P N+L T + + L DFG A+ T
Sbjct: 114 EREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 169
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+ + + T T Y+APE D+++ G+I+ L+ G
Sbjct: 170 SHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 122 QRYAAAIGTAKG--LRFLHEECRGGPIIHRDMRPSNILLTH---DFVPMLGDFGLARWKT 176
+R A+ I + G +++LH I HRD++P N+L T + + L DFG A+ +T
Sbjct: 114 EREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ET 168
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
T T+ T Y+APE D+++ G+I+ L+ G
Sbjct: 169 TSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 53/297 (17%)
Query: 22 TGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQS---EVYV-LNFAR 77
T +F + +G G FG V+K + I A R + G + Q+ EVY +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 78 HKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTE--SVLEWHQRYAAAIGTAKGLR 135
H ++V +++ ++ EY SL + +N S + + + +GLR
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL---GTLG-- 190
++H ++H D++PSNI ++ +P + DD K++ G LG
Sbjct: 128 YIHSMS----LVHMDIKPSNIFISRTSIPN----AASEEGDEDDWASNKVMFKIGDLGHV 179
Query: 191 --------------YLAPEYAENGIVSI-RTDVYAFGIILLQLMSGRKVVDMNGEEPQQS 235
+LA E + + + D++A + ++ +G + + NG++ +
Sbjct: 180 TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHE- 237
Query: 236 LRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVR 292
+RQ P I P++ + T L +M + +PE RPS +V+
Sbjct: 238 IRQGRLPRI----------PQVLSQEFTELLKVM-------IHPDPERRPSAMALVK 277
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 53/297 (17%)
Query: 22 TGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQS---EVYV-LNFAR 77
T +F + +G G FG V+K + I A R + G + Q+ EVY +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 78 HKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTE--SVLEWHQRYAAAIGTAKGLR 135
H ++V +++ ++ EY SL + +N S + + + +GLR
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL---GTLG-- 190
++H ++H D++PSNI ++ +P + DD K++ G LG
Sbjct: 126 YIHSMS----LVHMDIKPSNIFISRTSIPN----AASEEGDEDDWASNKVMFKIGDLGHV 177
Query: 191 --------------YLAPEYAENGIVSI-RTDVYAFGIILLQLMSGRKVVDMNGEEPQQS 235
+LA E + + + D++A + ++ +G + + NG++ +
Sbjct: 178 TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVX-AAGAEPLPRNGDQWHE- 235
Query: 236 LRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVR 292
+RQ P I P++ + T L +M + +PE RPS +V+
Sbjct: 236 IRQGRLPRI----------PQVLSQEFTELLKVM-------IHPDPERRPSAMALVK 275
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 53/297 (17%)
Query: 22 TGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQS---EVYV-LNFAR 77
T +F + +G G FG V+K + I A R + G + Q+ EVY +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 78 HKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTE--SVLEWHQRYAAAIGTAKGLR 135
H ++V +++ ++ EY SL + +N S + + + +GLR
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL---GTLG-- 190
++H ++H D++PSNI ++ +P + DD K++ G LG
Sbjct: 128 YIHSMS----LVHMDIKPSNIFISRTSIPN----AASEEGDEDDWASNKVMFKIGDLGHV 179
Query: 191 --------------YLAPEYAENGIVSI-RTDVYAFGIILLQLMSGRKVVDMNGEEPQQS 235
+LA E + + + D++A + ++ +G + + NG++ +
Sbjct: 180 TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHE- 237
Query: 236 LRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVR 292
+RQ P I P++ + T L +M + +PE RPS +V+
Sbjct: 238 IRQGRLPRI----------PQVLSQEFTELLKVM-------IHPDPERRPSAMALVK 277
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 53/297 (17%)
Query: 22 TGDFSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQS---EVYV-LNFAR 77
T +F + +G G FG V+K + I A R + G + Q+ EVY +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 78 HKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTE--SVLEWHQRYAAAIGTAKGLR 135
H ++V +++ ++ EY SL + +N S + + + +GLR
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 136 FLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKIL---GTLG-- 190
++H ++H D++PSNI ++ +P + DD K++ G LG
Sbjct: 130 YIHSMS----LVHMDIKPSNIFISRTSIPN----AASEEGDEDDWASNKVMFKIGDLGHV 181
Query: 191 --------------YLAPEYAENGIVSI-RTDVYAFGIILLQLMSGRKVVDMNGEEPQQS 235
+LA E + + + D++A + ++ +G + + NG++ +
Sbjct: 182 TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHE- 239
Query: 236 LRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSMGEVVR 292
+RQ P I P++ + T L +M + +PE RPS +V+
Sbjct: 240 IRQGRLPRI----------PQVLSQEFTELLKVM-------IHPDPERRPSAMALVK 279
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 115/308 (37%), Gaps = 80/308 (25%)
Query: 30 LLGEGGFGHVYKGE-LKDGQMIAAK-VRKEASTQGFAEFQSEVYVLNFARHKNIVMLLGF 87
+L EGGF VY+ + + G+ A K + + A Q ++ + H NIV F
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ---F 91
Query: 88 CCKENLN----------ILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFL 137
C ++ L+ +C L E + + R + T L+
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQL-------VEFLKKMESRGPLSCDTV--LKIF 142
Query: 138 HEECRG--------GPIIHRDMRPSNILLTHDFVPMLGDFGLA---------RWKTTDDP 180
++ CR PIIHRD++ N+LL++ L DFG A W
Sbjct: 143 YQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRA 202
Query: 181 -VQTKIL--GTLGYLAPEYAE---NGIVSIRTDVYAFGIILLQLM-------SGRKVVDM 227
V+ +I T Y PE + N + + D++A G IL L G K+ +
Sbjct: 203 LVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV 262
Query: 228 NGEEPQQSLRQWAEPLIEKLALHELIDPRIENSYDTYELYLMAKTAYLCVQRNPEGRPSM 287
NG K ++ P + Y + + A +Q NPE R S+
Sbjct: 263 NG----------------KYSI-----PPHDTQYTVFHSLIRAM-----LQVNPEERLSI 296
Query: 288 GEVVRLLE 295
EVV L+
Sbjct: 297 AEVVHQLQ 304
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 122 QRYAAAIGTAKG--LRFLHEECRGGPIIHRDMRPSNILLTH---DFVPMLGDFGLARWKT 176
+R A+ I + G +++LH I HRD++P N+L T + + L DFG A+ T
Sbjct: 160 EREASEIXKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
Query: 177 TDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
+ + + T T Y+APE D ++ G+I L+ G
Sbjct: 216 SHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 29/218 (13%)
Query: 25 FSKENLLGEGGFGHVYKGELKDGQMIAAKVRKEASTQGFAEFQSEVYV-LNFARHKNIVM 83
F E + G+G FG V G+ K M A ++K F + ++ L H NIV
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVA-IKKVIQDPRFRNRELQIMQDLAVLHHPNIVQ 83
Query: 84 L------LGFCCKENLNI-LVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRF 136
L LG + ++ + +V EY+ + +LH +++R A + F
Sbjct: 84 LQSYFYTLGERDRRDIYLNVVMEYVPD-TLH-------RCCRNYYRRQVAPPPILIKV-F 134
Query: 137 LHEECRG--------GPIIHRDMRPSNILLTH-DFVPMLGDFGLARWKTTDDPVQTKILG 187
L + R + HRD++P N+L+ D L DFG A+ + +P +
Sbjct: 135 LFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP-NVAYIC 193
Query: 188 TLGYLAPEYA-ENGIVSIRTDVYAFGIILLQLMSGRKV 224
+ Y APE N + D+++ G I ++M G +
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPI 231
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 55/264 (20%)
Query: 9 DPMKFSF-----SEIQQATGDFSKENL-LGEGGFGHVYKGELKDGQMIAAKVRKEASTQG 62
D M + F SE ++ F E +G G +GHVYK + KDG+ K+ G
Sbjct: 1 DKMDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG 60
Query: 63 FA-EFQSEVYVLNFARHKNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWH 121
+ E+ +L +H N++ L V+ ++ + W LFD E L WH
Sbjct: 61 ISMSACREIALLRELKHPNVISLQK----------VFLSHADRKV-WLLFDYAEHDL-WH 108
Query: 122 --QRYAAAIGTAK------------------GLRFLHEECRGGPIIHRDMRPSNILLTHD 161
+ + A+ K G+ +LH ++HRD++P+NIL+ +
Sbjct: 109 IIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW----VLHRDLKPANILVMGE 164
Query: 162 FVP----MLGDFGLAR-WKTTDDPVQ--TKILGTLGYLAPEY---AENGIVSIRTDVYAF 211
+ D G AR + + P+ ++ T Y APE A + +I D++A
Sbjct: 165 GPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAI--DIWAI 222
Query: 212 GIILLQLMSGRKVVDMNGEEPQQS 235
G I +L++ + E+ + S
Sbjct: 223 GCIFAELLTSEPIFHCRQEDIKTS 246
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 32/120 (26%)
Query: 127 AIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPM--------------------- 165
I K L +L R + H D++P NILL +
Sbjct: 143 CIEILKALNYL----RKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKS 198
Query: 166 ----LGDFGLARWKTTDDPVQTKILGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
L DFG A +K+ I+ T Y APE N + +D+++FG +L +L +G
Sbjct: 199 TGIKLIDFGCATFKSD---YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVP------MLGDFGLARWKTTDDPVQTKIL 186
GL ++H C IIH D++P N+L+ P + D G A W D T +
Sbjct: 143 GLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY---DEHYTNSI 196
Query: 187 GTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
T Y +PE D+++ ++ +L++G
Sbjct: 197 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVP------MLGDFGLARWKTTDDPVQTKIL 186
GL ++H C IIH D++P N+L+ P + D G A W D T +
Sbjct: 143 GLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY---DEHYTNSI 196
Query: 187 GTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
T Y +PE D+++ ++ +L++G
Sbjct: 197 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 78 HKNIVMLLGFCCKEN-----LNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAK 132
H +IV + F + + +V EY+ +SL + L + A +
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK----RSKGQKLPVAEAIAYLLEILP 193
Query: 133 GLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLARWKTTDDPVQTKILGTLGYL 192
L +LH +++ D++P NI+LT + + ++ ++R + + GT G+
Sbjct: 194 ALSYLHSIG----LVYNDLKPENIMLTEEQLKLIDLGAVSRINSFG-----YLYGTPGFQ 244
Query: 193 APEYAENGIVSIRTDVYAFGIILLQLM------SGRKVVDMNGEEP 232
APE G ++ TD+Y G L L +GR V + ++P
Sbjct: 245 APEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDP 289
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 30 LLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQS------EVYVLNFARH--KN 80
LLG GGFG VY G + D +A K ++ + E + EV +L
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 81 IVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAI--GTAKGLRFLH 138
++ LL + + + +L+ E + LFD + A + + +R
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQ---DLFDFITERGALQEELARSFFWQVLEAVR--- 128
Query: 139 EECRGGPIIHRDMRPSNILLTHDFVPM-LGDFGLARWKTTDDPVQTKILGTLGYLAPEYA 197
C ++HRD++ NIL+ + + L DFG D V T GT Y PE+
Sbjct: 129 -HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG--ALLKDTVYTDFDGTRVYSPPEWI 185
Query: 198 ENGIVSIRT-DVYAFGIILLQLMSG 221
R+ V++ GI+L ++ G
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 22/144 (15%)
Query: 31 LGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQ-SEVYVLNFARHKN-------- 80
LG G F V+ +++ + +A KV K S + + E E+ +L R+ +
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKVVK--SAEHYTETALDEIRLLKSVRNSDPNDPNREM 102
Query: 81 IVMLLGFCCKENLN----ILVYEYICNKSLHWHLFDNTESV-LEWHQRYAAAIGTAKGLR 135
+V LL +N +V+E + + L W + N + + L ++ + +GL
Sbjct: 103 VVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQV--LQGLD 160
Query: 136 FLHEECRGGPIIHRDMRPSNILLT 159
+LH +CR IIH D++P NILL+
Sbjct: 161 YLHTKCR---IIHTDIKPENILLS 181
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 78/211 (36%), Gaps = 32/211 (15%)
Query: 30 LLGEGGFGHVYKG-ELKDGQMIAAKVRKEASTQGFAEFQSEVY----------VLNFARH 78
LLG+GGFG V+ G L D +A KV G++ V V H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 79 KNIVMLLGFCCKENLNILVYEYICNKSLHWHLFDNTESVLEWHQRYAAAIGTAKGLRFLH 138
++ LL + + +LV E LFD +G F
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQ---DLFDYITE--------KGPLGEGPSRCFFG 146
Query: 139 E------ECRGGPIIHRDMRPSNILLT-HDFVPMLGDFGLARWKTTDDPVQTKILGTLGY 191
+ C ++HRD++ NIL+ L DFG D T GT Y
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSG--ALLHDEPYTDFDGTRVY 204
Query: 192 LAPEY-AENGIVSIRTDVYAFGIILLQLMSG 221
PE+ + + ++ V++ GI+L ++ G
Sbjct: 205 SPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 22/144 (15%)
Query: 31 LGEGGFGHVY-KGELKDGQMIAAKVRKEASTQGFAEFQ-SEVYVLNFARHKN-------- 80
LG G F V+ +++ + +A KV K S + + E E+ +L R+ +
Sbjct: 29 LGWGHFSTVWLSWDIQGKKFVAMKVVK--SAEHYTETALDEIRLLKSVRNSDPNDPNREM 86
Query: 81 IVMLLGFCCKENLN----ILVYEYICNKSLHWHLFDNTESV-LEWHQRYAAAIGTAKGLR 135
+V LL +N +V+E + + L W + N + + L ++ + +GL
Sbjct: 87 VVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQV--LQGLD 144
Query: 136 FLHEECRGGPIIHRDMRPSNILLT 159
+LH +CR IIH D++P NILL+
Sbjct: 145 YLHTKCR---IIHTDIKPENILLS 165
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFV-PMLGDFGLARWKTTDDPVQT-----KI 185
+GL +LH I+H D++ N+LL+ D L DFG A D ++ I
Sbjct: 161 EGLEYLHTR----RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 216
Query: 186 LGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
GT ++APE + D+++ ++L +++G
Sbjct: 217 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 132 KGLRFLHEECRGGPIIHRDMRPSNILLTHDFV-PMLGDFGLARWKTTDDPVQT-----KI 185
+GL +LH I+H D++ N+LL+ D L DFG A D ++ I
Sbjct: 175 EGLEYLHTR----RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 230
Query: 186 LGTLGYLAPEYAENGIVSIRTDVYAFGIILLQLMSG 221
GT ++APE + D+++ ++L +++G
Sbjct: 231 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,105,892
Number of Sequences: 62578
Number of extensions: 430984
Number of successful extensions: 3405
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 302
Number of HSP's that attempted gapping in prelim test: 1093
Number of HSP's gapped (non-prelim): 1139
length of query: 315
length of database: 14,973,337
effective HSP length: 99
effective length of query: 216
effective length of database: 8,778,115
effective search space: 1896072840
effective search space used: 1896072840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)