BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046128
(435 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 200/438 (45%), Gaps = 26/438 (5%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
+PPG G P++GETL + F +Q+++G IFKT + G + ++ A +F+
Sbjct: 13 IPPGDFGLPWLGETLNFLND--GDFGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFT 70
Query: 61 THAHFFKPTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAIS 120
F+ T+P S ++GP+AL + H RK++ + P + +P ++ I
Sbjct: 71 KEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQG 130
Query: 121 ALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQN------YLIVDKGYNS 174
LE + + ++++ +FDV G EK+ QN + +G S
Sbjct: 131 YLEQWGKANEVIWYPQLRRMTFDVAATLFMG-------EKVSQNPQLFPWFETYIQGLFS 183
Query: 175 FPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQ 234
P +P T + K+ AR L + +II G LL +RD+ + L+ +
Sbjct: 184 LPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEEDALGILLAARDDNNQPLSLPE 243
Query: 235 IADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQT 294
+ D I+ +LFA +T S L+ L + + E V+ EQ + S + LT
Sbjct: 244 LKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLS-----QELTAETL 298
Query: 295 KNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSE 354
K M + + E +R+ + FRE + D +++GF PKGW V H + + + +
Sbjct: 299 KKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPD 358
Query: 355 PQKVDPSRFK-----VAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVG 409
P+K DP RF P VPFG G+ C G E A+LEM + L+ +F W ++
Sbjct: 359 PEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLP 418
Query: 410 SQN-GIQYGPFPVPEKGL 426
QN + P P P+ L
Sbjct: 419 GQNLELVVTPSPRPKDNL 436
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 183/430 (42%), Gaps = 22/430 (5%)
Query: 2 PPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPE-AAKFVLA 60
P G P +G ++ ++DP + F ++ + +G++ + + + +PE L
Sbjct: 25 PVAGGGVPLLGHGWRL-ARDP-LAFMSQLRDHGDVVRIKLGPKTVYAVTNPELTGALALN 82
Query: 61 THAHFFKPTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAIS 120
H P + +S E ++G + H R R+ +Q + + I P +E A +
Sbjct: 83 PDYHIAGPLW-ESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAYGPIMEEEAHA 141
Query: 121 ALESCAVGQVINTFKEMKKFSFDVGILSIF-GNLDDSYREKLKQNYLIVDKGYNSFPSNI 179
E G+ ++ E + + V + G D E+L V +G
Sbjct: 142 LTERWQPGKTVDATSESFRVAVRVAARCLLRGQYMDERAERLCVALATVFRGMYRRMVVP 201
Query: 180 PGTAYHKALLARKR-------LSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTE 232
G Y L A +R L +V EII LL ++D+ G + E
Sbjct: 202 LGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKPDDLLTALLEAKDDNGDPIGE 261
Query: 233 DQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWA 292
+I D ++ +L +T AS + W+L+ L D+P+ + ++ E + V G R + +
Sbjct: 262 QEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVT-----GGRPVAFE 316
Query: 293 QTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFF 352
+ +R T I+E+MR+ + R AV + E G+ IP G ++ I + + +
Sbjct: 317 DVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSY 376
Query: 353 SEPQKVDPSRF---KVAPRPN-TFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWE-V 407
+ + DP R+ + A P PF G CP + + ++ ++ L T++R+E V
Sbjct: 377 DDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQV 436
Query: 408 VGSQNGIQYG 417
GS + ++ G
Sbjct: 437 AGSNDAVRVG 446
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 171/419 (40%), Gaps = 31/419 (7%)
Query: 9 PFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFF-- 66
PF+G + + + P F ++YG +F ++G L +AA + +
Sbjct: 21 PFLGHAIA-FGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNA 79
Query: 67 KPTYPKSKEKIIG-------PSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAI 119
+ Y + + G P+ +F Q +K+++S L+ K+ + IE
Sbjct: 80 EDVYSRLTTPVFGKGVAYDVPNPVFLEQ-------KKMLKSGLNIAHFKQHVSIIEKETK 132
Query: 120 SALESCAVGQVINTFKEMKKFSFDVGILSIFG-NLDDSYREKLKQNYLIVDKGYNS---- 174
ES N F+ + + + G + EK+ Q Y +D G++
Sbjct: 133 EYFESWGESGEKNVFEALSELIILTASHCLHGKEIRSQLNEKVAQLYADLDGGFSHAAWL 192
Query: 175 FPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQ 234
P +P ++ + A + + I + I LL++ + GR LT+D+
Sbjct: 193 LPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQTLLDATYKDGRPLTDDE 252
Query: 235 IADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQT 294
+A +IG+L A Q T+++ W+ +L + L + EQK V N LT+ Q
Sbjct: 253 VAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN---LPPLTYDQL 309
Query: 295 KNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSE 354
K++ R I E++R+ I R A G+ IP G +V + + E
Sbjct: 310 KDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVE 369
Query: 355 PQKVDPSRFKVAPRPNT-----FVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVV 408
+P R+ + P + +VPFG G H C G A +++ + ++ + ++++
Sbjct: 370 RLDFNPDRY-LQDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLI 427
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 173/450 (38%), Gaps = 39/450 (8%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG PFIG LQ+ ++ +RYG +F H+ V+L +A + L
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 61 THAHFFKPTYPKSK-EKIIGPSALFFHQADYHARLRKLVQSSL-----SPERIKKLIPDI 114
A F ++ + + + F + +LR+ ++L I++ I +
Sbjct: 71 DQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEE 130
Query: 115 EAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNS 174
I AL + TF + S + + +FG+ D Y++K + L + G
Sbjct: 131 AGFLIDALRGTGGANIDPTFFLSRTVSNVISSI-VFGDRFD-YKDKEFLSLLRMMLGSFQ 188
Query: 175 FPSNIPGTAYHKALLARK----------RLSQIVSEIICXXXXXXXXXXX-------XXG 217
F S G Y K +L Q + + I
Sbjct: 189 FTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDS 248
Query: 218 CLLNSRDEKGRTLTEDQIADNIIGVL---FAAQDTTASVLTWILKYLHDNPKLLEAVKAE 274
L+ ++E+ TE + + ++ L FA +T ++ L + L +P++ V E
Sbjct: 249 FLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEE 308
Query: 275 -QKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTF-REAVCDVEYKGFLI 332
+V+ G R + M I E R +I R D +++ F +
Sbjct: 309 IDRVI-----GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFL 363
Query: 333 PKGWKVMPLFRNIHHNSEFFSEPQKVDPSRF----KVAPRPNTFVPFGLGVHACPGNELA 388
PKG +V P+ ++ + FFS PQ +P F + + FVPF +G C G LA
Sbjct: 364 PKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLA 423
Query: 389 KLEMLILIHHLVTEFRWEVVGSQNGIQYGP 418
++E+ + ++ FR + S I P
Sbjct: 424 RMELFLFFTTVMQNFRLKSSQSPKDIDVSP 453
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 182/446 (40%), Gaps = 61/446 (13%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG P IG LQI +D + K YG +F + V+L E K L
Sbjct: 12 LPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALI 71
Query: 61 THAHFF--KPTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSLS-------------PE 105
F + +P ++ G + F +R+ +L E
Sbjct: 72 DLGEEFSGRGHFPLAERANRG-FGIVFSNGKRWKEIRRFSLMTLRNFGMGKRSIEDRVQE 130
Query: 106 RIKKLIPDIEAIAISALE-----SCAVGQVINTFKEMKKFSF-DVGILSIFGNLDDSYRE 159
+ L+ ++ S + CA VI + K+F + D L++ E
Sbjct: 131 EARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQFLNLM--------E 182
Query: 160 KLKQNYLIVDKGY----NSFPSNI---PGTAYHKALLARKRLSQIVSEIICXXXXXXXXX 212
KL +N IV + N+FP+ I PGT H LL K L+ + S+I+
Sbjct: 183 KLNENIRIVSTPWIQICNNFPTIIDYFPGT--HNKLL--KNLAFMESDILEKVKEHQESM 238
Query: 213 XXXX-----GC-LLNSRDEKGRTLTEDQIADNII---GVLFAAQDTTASVLTWILKYLHD 263
C L+ EK +E I + +I +L A +TT++ L + L L
Sbjct: 239 DINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLK 298
Query: 264 NPKLLEAVKAE-QKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAV 322
+P++ V+ E ++VV G R+ +M T + E R +I + AV
Sbjct: 299 HPEVTAKVQEEIERVV-----GRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAV 353
Query: 323 -CDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA----PRPNTFVPFGL 377
CDV+++ +LIPKG ++ ++ H+++ F P+ DP F + N F+PF
Sbjct: 354 TCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSA 413
Query: 378 GVHACPGNELAKLEMLILIHHLVTEF 403
G C G LA++E+ + + ++ F
Sbjct: 414 GKRICVGEGLARMELFLFLTFILQNF 439
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 172/450 (38%), Gaps = 39/450 (8%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG PFIG LQ+ ++ +RYG +F H+ V+L +A + L
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 61 THAHFFKPTYPKSK-EKIIGPSALFFHQADYHARLRKLVQSSL-----SPERIKKLIPDI 114
A F ++ + + + F + +LR+ ++L I++ I +
Sbjct: 71 DQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEE 130
Query: 115 EAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNS 174
I AL + TF + S + + +FG+ D Y++K + L + G
Sbjct: 131 AGFLIDALRGTGGANIDPTFFLSRTVSNVISSI-VFGDRFD-YKDKEFLSLLRMMLGIFQ 188
Query: 175 FPSNIPGTAYHKALLARK----------RLSQIVSEIICXXXXXXXXXXX-------XXG 217
F S G Y K +L Q + + I
Sbjct: 189 FTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDS 248
Query: 218 CLLNSRDEKGRTLTEDQIADNIIGVL---FAAQDTTASVLTWILKYLHDNPKLLEAVKAE 274
L+ ++E+ TE + + ++ L +T ++ L + L +P++ V E
Sbjct: 249 FLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEE 308
Query: 275 -QKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTF-REAVCDVEYKGFLI 332
+V+ G R + M I E R +I + R D +++ F +
Sbjct: 309 IDRVI-----GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFL 363
Query: 333 PKGWKVMPLFRNIHHNSEFFSEPQKVDPSRF----KVAPRPNTFVPFGLGVHACPGNELA 388
PKG +V P+ ++ + FFS PQ +P F + + FVPF +G C G LA
Sbjct: 364 PKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLA 423
Query: 389 KLEMLILIHHLVTEFRWEVVGSQNGIQYGP 418
++E+ + ++ FR + S I P
Sbjct: 424 RMELFLFFTTVMQNFRLKSSQSPKDIDVSP 453
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 172/450 (38%), Gaps = 39/450 (8%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG PFIG LQ+ ++ +RYG +F H+ V+L +A + L
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 61 THAHFFKPTYPKSK-EKIIGPSALFFHQADYHARLRKLVQSSL-----SPERIKKLIPDI 114
A F ++ + + + F + +LR+ ++L I++ I +
Sbjct: 71 DQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEE 130
Query: 115 EAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNS 174
I AL + TF + S + + +FG+ D Y++K + L + G
Sbjct: 131 AGFLIDALRGTGGANIDPTFFLSRTVSNVISSI-VFGDRFD-YKDKEFLSLLRMMLGIFQ 188
Query: 175 FPSNIPGTAYHKALLARK----------RLSQIVSEIICXXXXXXXXXXX-------XXG 217
F S G Y K +L Q + + I
Sbjct: 189 FTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDS 248
Query: 218 CLLNSRDEKGRTLTEDQIADNIIGVL---FAAQDTTASVLTWILKYLHDNPKLLEAVKAE 274
L+ ++E+ TE + + ++ L +T ++ L + L +P++ V E
Sbjct: 249 FLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEE 308
Query: 275 -QKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTF-REAVCDVEYKGFLI 332
+V+ G R + M I E R +I + R D +++ F +
Sbjct: 309 IDRVI-----GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFL 363
Query: 333 PKGWKVMPLFRNIHHNSEFFSEPQKVDPSRF----KVAPRPNTFVPFGLGVHACPGNELA 388
PKG +V P+ ++ + FFS PQ +P F + + FVPF +G C G LA
Sbjct: 364 PKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLA 423
Query: 389 KLEMLILIHHLVTEFRWEVVGSQNGIQYGP 418
++E+ + ++ FR + S I P
Sbjct: 424 RMELFLFFTTVMQNFRLKSSQSPKDIDVSP 453
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 171/450 (38%), Gaps = 39/450 (8%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG PFIG LQ+ ++ +RYG +F H+ V+L +A + L
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 61 THAHFFKPTYPKSK-EKIIGPSALFFHQADYHARLRKLVQSSL-----SPERIKKLIPDI 114
A F ++ + + + F + +LR+ ++L I++ I +
Sbjct: 71 DQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEE 130
Query: 115 EAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNS 174
I AL + TF + S + + +FG+ D Y++K + L + G
Sbjct: 131 AGFLIDALRGTGGANIDPTFFLSRTVSNVISSI-VFGDRFD-YKDKEFLSLLRMMLGIFQ 188
Query: 175 FPSNIPGTAYHKALLARKRLS----------QIVSEIICXXXXXXXXXXX-------XXG 217
F S G Y K L Q + + I
Sbjct: 189 FTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEHNQRTLDPNSPRDFIDS 248
Query: 218 CLLNSRDEKGRTLTEDQIADNIIGVL---FAAQDTTASVLTWILKYLHDNPKLLEAVKAE 274
L+ ++E+ TE + + ++ L +T ++ L + L +P++ V E
Sbjct: 249 FLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEE 308
Query: 275 -QKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTF-REAVCDVEYKGFLI 332
+V+ G R + M I E R +I + R D +++ F +
Sbjct: 309 IDRVI-----GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFL 363
Query: 333 PKGWKVMPLFRNIHHNSEFFSEPQKVDPSRF----KVAPRPNTFVPFGLGVHACPGNELA 388
PKG +V P+ ++ + FFS PQ +P F + + FVPF +G C G LA
Sbjct: 364 PKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLA 423
Query: 389 KLEMLILIHHLVTEFRWEVVGSQNGIQYGP 418
++E+ + ++ FR + S I P
Sbjct: 424 RMELFLFFTTVMQNFRLKSSQSPKDIDVSP 453
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 172/450 (38%), Gaps = 39/450 (8%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG PFIG LQ+ ++ +RYG +F H+ V+L +A + L
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 61 THAHFFKPTYPKSK-EKIIGPSALFFHQADYHARLRKLVQSSL-----SPERIKKLIPDI 114
A F ++ + + + F + +LR+ ++L I++ I +
Sbjct: 71 DQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEE 130
Query: 115 EAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNS 174
I AL + TF + S + + +FG+ D Y++K + L + G
Sbjct: 131 AGFLIDALRGTGGANIDPTFFLSRTVSNVISSI-VFGDRFD-YKDKEFLSLLRMMLGIFQ 188
Query: 175 FPSNIPGTAYHKALLARK----------RLSQIVSEIICXXXXXXXXXXX-------XXG 217
F S G Y K +L Q + + I
Sbjct: 189 FTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDS 248
Query: 218 CLLNSRDEKGRTLTEDQIADNIIGVL---FAAQDTTASVLTWILKYLHDNPKLLEAVKAE 274
L+ ++E+ TE + + ++ L +T ++ L + L +P++ V E
Sbjct: 249 FLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEE 308
Query: 275 -QKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTF-REAVCDVEYKGFLI 332
+V+ G R + M I E R +I + R D +++ F +
Sbjct: 309 IDRVI-----GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFL 363
Query: 333 PKGWKVMPLFRNIHHNSEFFSEPQKVDPSRF----KVAPRPNTFVPFGLGVHACPGNELA 388
PKG +V P+ ++ + FFS PQ +P F + + FVPF +G C G LA
Sbjct: 364 PKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLA 423
Query: 389 KLEMLILIHHLVTEFRWEVVGSQNGIQYGP 418
++E+ + ++ FR + S I P
Sbjct: 424 RMELFLFFTTVMQNFRLKSSQSPKDIDVSP 453
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 174/442 (39%), Gaps = 43/442 (9%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG P IG LQI +D F K YG +F + P V+ EA K L
Sbjct: 11 LPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALI 70
Query: 61 THAHFF--KPTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSLS---------PERIKK 109
+ F + P S ++I + +R+ ++L +R+++
Sbjct: 71 DNGEEFSGRGNSPIS-QRITKGLGIISSNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQE 129
Query: 110 ----LIPDIEAIAISALE-----SCAVGQVINTFKEMKKFSF-DVGILSIFGNLDDSYRE 159
L+ ++ S + CA VI + K+F + D L++ ++++R
Sbjct: 130 EAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTLMKRFNENFR- 188
Query: 160 KLKQNYLIVDKGYNSFPSNIPGTAYHKAL----LARKRLSQIVSEIICXXXXXXXXXXXX 215
L ++ V + PGT ++K L L R + + V E
Sbjct: 189 ILNSPWIQVCNNFPLLIDCFPGT-HNKVLKNVALTRSYIREKVKE--HQASLDVNNPRDF 245
Query: 216 XGCLL----NSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAV 271
C L +D + + + + + A +TT++ L + L L +P++ V
Sbjct: 246 IDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKV 305
Query: 272 KAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVC-DVEYKGF 330
+ E V G R+ +M T + E R + ++ AV D +++ +
Sbjct: 306 QEEIDHVI----GRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNY 361
Query: 331 LIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA----PRPNTFVPFGLGVHACPGNE 386
LIPKG +M L ++ H+ + F P DP F + + F+PF G C G
Sbjct: 362 LIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDYFMPFSAGKRICAGEG 421
Query: 387 LAKLEMLILIHHLVTEFRWEVV 408
LA++E+ + + ++ F + V
Sbjct: 422 LARMELFLFLTTILQNFNLKSV 443
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 173/450 (38%), Gaps = 39/450 (8%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG PFIG LQ+ ++ +RYG +F H+ V+L +A K L
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALV 70
Query: 61 THAHFFKPTYPKSK-EKIIGPSALFFHQADYHARLRKLVQSSL-----SPERIKKLIPDI 114
A F ++ + + + F + +LR+ ++L I++ I +
Sbjct: 71 DQAEEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRRFSIATLRGFGVGKRGIEERIQEE 130
Query: 115 EAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNS 174
I AL + TF + S + + +FG+ D Y +K + L + G
Sbjct: 131 AGFLIDALRGTHGANIDPTFFLSRTVSNVISSI-VFGDRFD-YEDKEFLSLLRMMLGSFQ 188
Query: 175 FPSNIPGTAYHKALLARKRLS----------QIVSEIICXXXXXXXXXXX-------XXG 217
F + G Y K L Q + + I
Sbjct: 189 FTATSTGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIAKKVEHNQRTLDPNSPRDFIDS 248
Query: 218 CLLNSRDEKGRTLTEDQIADNIIGVL---FAAQDTTASVLTWILKYLHDNPKLLEAVKAE 274
L+ ++E+ TE + + ++ L FA +T ++ L + L +P++ V E
Sbjct: 249 FLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEE 308
Query: 275 -QKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVC-DVEYKGFLI 332
+V+ G R + M T I E R ++ V D +++ F +
Sbjct: 309 IDRVI-----GKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFL 363
Query: 333 PKGWKVMPLFRNIHHNSEFFSEPQKVDPSRF----KVAPRPNTFVPFGLGVHACPGNELA 388
PKG +V P+ ++ + FFS P+ +P F + + FVPF +G C G LA
Sbjct: 364 PKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDAFVPFSIGKRYCFGEGLA 423
Query: 389 KLEMLILIHHLVTEFRWEVVGSQNGIQYGP 418
++E+ + ++ FR++ S I P
Sbjct: 424 RMELFLFFTTIMQNFRFKSPQSPKDIDVSP 453
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 172/448 (38%), Gaps = 48/448 (10%)
Query: 2 PPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLAT 61
PP GWP +G L + ++P++ + +RYG++ + I P ++L+ + + L
Sbjct: 18 PPEPWGWPLLGHVLTL-GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVR 76
Query: 62 HAHFFK--PTYPKSKEKIIGPSALFFHQAD--YHARLRKLVQSSLSPERIKKLIPDIEAI 117
FK P S G S F + + AR R+L Q++L+ I +
Sbjct: 77 QGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAAR-RRLAQNALNTFSIASDPASSSSC 135
Query: 118 AISALESCAVGQVINTFKEMKKF--SFD------VGILSIFGNL---------DDSYREK 160
+ S +I+ +E+ FD V + ++ G + D
Sbjct: 136 YLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSL 195
Query: 161 LKQNYLIVDKGYNSFPSN-------IPGTAYHKALLARKRLSQIVSEIICXXXXX--XXX 211
+K + V+ + P + +P A + +R + + +
Sbjct: 196 VKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDFDKNS 255
Query: 212 XXXXXGCLLNSRDE----KGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKL 267
G L + G + +++I + + + A DT + ++W L YL P++
Sbjct: 256 VRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEI 315
Query: 268 LEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVC-DVE 326
++ E V G +R + + FILE+ R +S + FT + D
Sbjct: 316 QRKIQKELDTV----IGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTT 371
Query: 327 YKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA-------PRPNTFVPFGLGV 379
GF IPK V ++H+ E + +P + P RF A P + FG+G
Sbjct: 372 LNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGK 431
Query: 380 HACPGNELAKLEMLILIHHLVTEFRWEV 407
C G LAK E+ + + L+ + + V
Sbjct: 432 RRCIGEVLAKWEIFLFLAILLQQLEFSV 459
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 182/438 (41%), Gaps = 44/438 (10%)
Query: 3 PGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATH 62
PG PF+G L Y + +F K+YG+++ + P + + P+ K VL
Sbjct: 17 PGPTPLPFLGNILS-YHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKE 75
Query: 63 AHFFKPTYPKSKEKIIGP-----SALFFHQADYHARLRKLVQSSLSPERIKKLIPDI--- 114
+ + + GP SA+ + + RLR L+ + + ++K+++P I
Sbjct: 76 CYSVF-----TNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQY 130
Query: 115 -EAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFG-NLD------DSYREKLKQ--N 164
+ + + G+ + +S DV + FG N+D D + E K+
Sbjct: 131 GDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLR 190
Query: 165 YLIVDKGYNS---FPSNIPGTAYHKALLARKRLSQIVSEII-----CXXXXXXXXXXXXX 216
+ +D + S FP IP + + ++ + + +
Sbjct: 191 FDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFL 250
Query: 217 GCLLNSRD----EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVK 272
+++S++ E + L++ ++ I +FA +TT+SVL++I+ L +P + + ++
Sbjct: 251 QLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQ 310
Query: 273 AEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLI 332
E V + + T+ M + E++R+ I R DVE G I
Sbjct: 311 EEIDAVLPN----KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFI 366
Query: 333 PKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPR----PNTFVPFGLGVHACPGNELA 388
PKG VM +H + ++++EP+K P RF + P + PFG G C G A
Sbjct: 367 PKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFA 426
Query: 389 KLEMLILIHHLVTEFRWE 406
+ M + + ++ F ++
Sbjct: 427 LMNMKLALIRVLQNFSFK 444
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 182/438 (41%), Gaps = 44/438 (10%)
Query: 3 PGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATH 62
PG PF+G L Y + +F K+YG+++ + P + + P+ K VL
Sbjct: 18 PGPTPLPFLGNILS-YHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKE 76
Query: 63 AHFFKPTYPKSKEKIIGP-----SALFFHQADYHARLRKLVQSSLSPERIKKLIPDI--- 114
+ + + GP SA+ + + RLR L+ + + ++K+++P I
Sbjct: 77 CYSVF-----TNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQY 131
Query: 115 -EAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFG-NLD------DSYREKLKQ--N 164
+ + + G+ + +S DV + FG N+D D + E K+
Sbjct: 132 GDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLR 191
Query: 165 YLIVDKGYNS---FPSNIPGTAYHKALLARKRLSQIVSEII-----CXXXXXXXXXXXXX 216
+ +D + S FP IP + + ++ + + +
Sbjct: 192 FDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFL 251
Query: 217 GCLLNSRD----EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVK 272
+++S++ E + L++ ++ I +FA +TT+SVL++I+ L +P + + ++
Sbjct: 252 QLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQ 311
Query: 273 AEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLI 332
E V + + T+ M + E++R+ I R DVE G I
Sbjct: 312 EEIDAVLPN----KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFI 367
Query: 333 PKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPR----PNTFVPFGLGVHACPGNELA 388
PKG VM +H + ++++EP+K P RF + P + PFG G C G A
Sbjct: 368 PKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFA 427
Query: 389 KLEMLILIHHLVTEFRWE 406
+ M + + ++ F ++
Sbjct: 428 LMNMKLALIRVLQNFSFK 445
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 182/438 (41%), Gaps = 44/438 (10%)
Query: 3 PGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATH 62
PG PF+G L Y + +F K+YG+++ + P + + P+ K VL
Sbjct: 19 PGPTPLPFLGNILS-YHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKE 77
Query: 63 AHFFKPTYPKSKEKIIGP-----SALFFHQADYHARLRKLVQSSLSPERIKKLIPDI--- 114
+ + + GP SA+ + + RLR L+ + + ++K+++P I
Sbjct: 78 CYSVF-----TNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQY 132
Query: 115 -EAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFG-NLD------DSYREKLKQ--N 164
+ + + G+ + +S DV + FG N+D D + E K+
Sbjct: 133 GDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLR 192
Query: 165 YLIVDKGYNS---FPSNIPGTAYHKALLARKRLSQIVSEII-----CXXXXXXXXXXXXX 216
+ +D + S FP IP + + ++ + + +
Sbjct: 193 FDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFL 252
Query: 217 GCLLNSRD----EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVK 272
+++S++ E + L++ ++ I +FA +TT+SVL++I+ L +P + + ++
Sbjct: 253 QLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQ 312
Query: 273 AEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLI 332
E V + + T+ M + E++R+ I R DVE G I
Sbjct: 313 EEIDAVLPN----KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFI 368
Query: 333 PKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPR----PNTFVPFGLGVHACPGNELA 388
PKG VM +H + ++++EP+K P RF + P + PFG G C G A
Sbjct: 369 PKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFA 428
Query: 389 KLEMLILIHHLVTEFRWE 406
+ M + + ++ F ++
Sbjct: 429 LMNMKLALIRVLQNFSFK 446
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 183/460 (39%), Gaps = 61/460 (13%)
Query: 2 PPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLAT 61
PPG P IG LQI +D + K YG +F + P V+L EA K L
Sbjct: 11 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 62 HAHFF--KPTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSLS-------------PER 106
F + +P ++ G + F +R+ +L E
Sbjct: 71 LGEEFSGRGIFPLAERANRG-FGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEE 129
Query: 107 IKKLIPDIEAIAISALE-----SCAVGQVINTFKEMKKFSF-DVGILSIFGNLDDSYREK 160
+ L+ ++ S + CA VI + K+F + D L++ EK
Sbjct: 130 ARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLM--------EK 181
Query: 161 LKQNYLIVD----KGYNSFPSNI---PGTAYHKALLARKRLSQIVSEIICXXXXXXXXXX 213
L +N I+ + YN+FP+ + PGT H LL K ++ + S I+
Sbjct: 182 LNENIEILSSPWIQVYNNFPALLDYFPGT--HNKLL--KNVAFMKSYILEKVKEHQESMD 237
Query: 214 XXX-----GCLLNSRDEKGRT----LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDN 264
C L +++ T + + + + + A +TT++ L + L L +
Sbjct: 238 MNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKH 297
Query: 265 PKLLEAVKAE-QKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAV- 322
P++ V+ E ++V+ G R+ +M T + E R ++ + AV
Sbjct: 298 PEVTAKVQEEIERVI-----GRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVT 352
Query: 323 CDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA----PRPNTFVPFGLG 378
CD++++ +LIPKG ++ ++ H+++ F P+ DP F + F+PF G
Sbjct: 353 CDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAG 412
Query: 379 VHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNGIQYGP 418
C G LA +E+ + + ++ F + + + P
Sbjct: 413 KRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTP 452
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/469 (20%), Positives = 187/469 (39%), Gaps = 54/469 (11%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG P IG Q+ ++ F +R+G +F ++ V++ +A K L
Sbjct: 11 LPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALL 70
Query: 61 THAHFFK-----PTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSL---------SPER 106
+ F P + +++ + F+ +R+ ++L + R
Sbjct: 71 DYKDEFSGRGDLPAFHAHRDR-----GIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESR 125
Query: 107 IKK----LIPDI-----EAIAISALESCAVGQVINTFKEMKKFSF-DVGILSIFGNLDDS 156
I++ L+ + + + L CA VI K F + D L + +++
Sbjct: 126 IQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFLRLMYLFNEN 185
Query: 157 YREKLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXX--XX 214
+ L +L + + SF +PG ++ K + + + VSE +
Sbjct: 186 F-HLLSTPWLQLYNNFPSFLHYLPG-SHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRD 243
Query: 215 XXGCLL----NSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEA 270
CLL + R T D I + + FA +TT++ L + L L P++ E
Sbjct: 244 LTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEK 303
Query: 271 VKAE-QKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTF-REAVCDVEYK 328
+ E +V+ G R + M + E R +++ EA D ++
Sbjct: 304 LHEEIDRVI-----GPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFR 358
Query: 329 GFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDP-------SRFKVAPRPNTFVPFGLGVHA 381
G+LIPKG V+P ++ ++++ F +P+K P +FK + + F PF G
Sbjct: 359 GYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYS---DYFKPFSTGKRV 415
Query: 382 CPGNELAKLEMLILIHHLVTEFRWEVVGSQNGIQYGPFPVPEKGLPARF 430
C G LA++E+ +L+ ++ F + + I P + +P R+
Sbjct: 416 CAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPPRY 464
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 166/441 (37%), Gaps = 53/441 (12%)
Query: 2 PPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLAT 61
PPG WP IG + Q ++ FA +RYG++F+ + CP V+L A L
Sbjct: 11 PPGPFAWPLIGNAAAV-GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQ 69
Query: 62 HAHFF--KPTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSL------SPERIKKLIPD 113
F +P++ + G S F H +++ R+ S + P + L
Sbjct: 70 QGSAFADRPSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGH 129
Query: 114 IEAIAISALESCAVGQVINTFKEMKKFSFDVGILSI---------FGNLDDSYREKLKQN 164
+ + A + G F + + + V + ++ + + D +RE L N
Sbjct: 130 VLSEARELVALLVRGSADGAFLDPRPLTV-VAVANVMSAVCFGCRYSHDDPEFRELLSHN 188
Query: 165 -----------YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEII--CXXXXXXXX 211
+ V FP+ + L R + I+ + + C
Sbjct: 189 EEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAA 248
Query: 212 XXXXXGCLLNSRDEK--------GRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHD 263
+ S ++K G L + + I + A+QDT ++ L W+L
Sbjct: 249 PRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTR 308
Query: 264 NPKLLEAVKAE-QKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREA- 321
P + V+AE +VV G R N+ F+ E+MR +S + T A
Sbjct: 309 YPDVQTRVQAELDQVV-----GRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHAT 363
Query: 322 VCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPR------PNTFVPF 375
+ G+ IPK V +++H+ + P+ DP+RF + + F
Sbjct: 364 TANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIF 423
Query: 376 GLGVHACPGNELAKLEMLILI 396
+G C G EL+K+++ + I
Sbjct: 424 SVGKRRCIGEELSKMQLFLFI 444
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 179/440 (40%), Gaps = 46/440 (10%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG +P IG LQI ++D + + YG +F ++ P V+L EA K L
Sbjct: 11 LPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALV 70
Query: 61 THAHFF--KPTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSLS---------PERIKK 109
F + + P EK+ + F A +R+ +L +RI++
Sbjct: 71 DLGEEFAGRGSVP-ILEKVSKGLGIAFSNAKTWKEMRRFSLMTLRNFGMGKRSIEDRIQE 129
Query: 110 ----LIPDIEAIAISALE-----SCAVGQVINTFKEMKKFSF-DVGILSIFGNLDDSYRE 159
L+ ++ S + CA VI + +F + D L + +L ++ E
Sbjct: 130 EARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHNRFDYKDEEFLKLMESLHENV-E 188
Query: 160 KLKQNYLIVDKGYNSFPSNI---PGTAYHKALLARKR-LSQIVSEIICXXXXXXXXXX-- 213
L +L V YN+FP+ + PG HK LL + + E +
Sbjct: 189 LLGTPWLQV---YNNFPALLDYFPGI--HKTLLKNADYIKNFIMEKVKEHQKLLDVNNPR 243
Query: 214 XXXGC-LLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVK 272
C L+ E T + + + + A +TT++ L + L L +P++ V+
Sbjct: 244 DFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQ 303
Query: 273 AE-QKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVC-DVEYKGF 330
E ++V+ G R+ M T I E R ++ AV DV ++ +
Sbjct: 304 EEIERVI-----GRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNY 358
Query: 331 LIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAP----RPNTFVPFGLGVHACPGNE 386
IPKG ++ ++ H+ + F P+ DP F + + F+PF G C G
Sbjct: 359 FIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDYFMPFSAGKRMCVGEG 418
Query: 387 LAKLEMLILIHHLVTEFRWE 406
LA++E+ + + ++ F+ +
Sbjct: 419 LARMELFLFLTSILQNFKLQ 438
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 173/441 (39%), Gaps = 51/441 (11%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG P +G LQ+ + F +++YG++F ++ P V+L +A + L
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 61 THAHFFKPTYPKSKEKIIGP----SALFFHQADYHARLRKLVQSSLSP---------ERI 107
A F + K ++ P + F + LR+ +++ ERI
Sbjct: 71 DQAEAFS---GRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERI 127
Query: 108 KK----LIPDIEAIAISALESCAV-----GQVINTFKEMKKFSFDVGILSIFGNLDDSYR 158
++ L+ ++ + L++ + +I + K+F + + +L
Sbjct: 128 QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSF 187
Query: 159 EKLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG- 217
+ V + ++ F + PGT H+ + R Q ++ I
Sbjct: 188 SLISSFSSQVFELFSGFLKHFPGT--HRQIY---RNLQEINTFIGQSVEKHRATLDPSNP 242
Query: 218 ------CLLNSRDEKGRTLTEDQIADNIIGVL---FAAQDTTASVLTWILKYLHDNPKLL 268
LL +K +E + I+ VL FA +TT++ L + + P +
Sbjct: 243 RDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVT 302
Query: 269 EAVKAE-QKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVC-DVE 326
E V+ E ++V+ G R M T I E R+ +I F V D +
Sbjct: 303 ERVQKEIEQVI-----GSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQ 357
Query: 327 YKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA----PRPNTFVPFGLGVHAC 382
++G++IPK +V P+ + H+ +F P +P F A R F+PF LG C
Sbjct: 358 FRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRIC 417
Query: 383 PGNELAKLEMLILIHHLVTEF 403
G +A+ E+ + ++ F
Sbjct: 418 LGEGIARTELFLFFTTILQNF 438
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 180/454 (39%), Gaps = 47/454 (10%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG P IG LQI +D + K YG +F + P V+L EA K L
Sbjct: 12 LPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALI 71
Query: 61 THAHFF--KPTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSLS-------------PE 105
F + +P ++ G + F +R+ +L E
Sbjct: 72 DLGEEFSGRGIFPLAERANRG-FGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQE 130
Query: 106 RIKKLIPDIEAIAISALE-----SCAVGQVINTFKEMKKFSF-DVGILSIFGNLDDSYRE 159
+ L+ ++ S + CA VI + K+F + D L++ L+++ +
Sbjct: 131 EARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIK- 189
Query: 160 KLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXX--- 216
L ++ + ++ PGT H LL K ++ + S I+
Sbjct: 190 ILSSPWIQICNNFSPIIDYFPGT--HNKLL--KNVAFMKSYILEKVKEHQESMDMNNPQD 245
Query: 217 --GCLLNSRDEKGRT----LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEA 270
C L +++ T + + + + + A +TT++ L + L L +P++
Sbjct: 246 FIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAK 305
Query: 271 VKAE-QKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAV-CDVEYK 328
V+ E ++V+ G R+ +M T + E R ++ + AV CD++++
Sbjct: 306 VQEEIERVI-----GRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFR 360
Query: 329 GFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA----PRPNTFVPFGLGVHACPG 384
+LIPKG ++ ++ H+++ F P+ DP F + F+PF G C G
Sbjct: 361 NYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVG 420
Query: 385 NELAKLEMLILIHHLVTEFRWEVVGSQNGIQYGP 418
LA +E+ + + ++ F + + + P
Sbjct: 421 EALAGMELFLFLTSILQNFNLKSLVDPKNLDTTP 454
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 163/424 (38%), Gaps = 47/424 (11%)
Query: 26 FATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFF--KPTYPKSKEKIIGPSAL 83
F ++R+G++F + P V+L A + L TH +P P ++ GP +
Sbjct: 36 FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQ 95
Query: 84 FFHQADYHARLRKLVQSSLSPER--------IKKLIPDIEAIAISA-------------L 122
A Y R+ + S+S R +++ + + A +A L
Sbjct: 96 GVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGL 155
Query: 123 ESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNSFPSN--IP 180
AV VI + ++F +D F L D +E LK+ + + N+ P + IP
Sbjct: 156 LDKAVSNVIASLTCGRRFEYDD---PRFLRLLDLAQEGLKEESGFLREVLNAVPVDRHIP 212
Query: 181 GTA-----YHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGR---TLTE 232
A + KA L +L ++++E L KG + +
Sbjct: 213 ALAGKVLRFQKAFLT--QLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFND 270
Query: 233 DQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWA 292
+ + + + A TT++ L W L + +P + V+ E V G R
Sbjct: 271 ENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDV----IGQVRRPEMG 326
Query: 293 QTKNMRCTYRFILESMRMASIISFTFREAVC-DVEYKGFLIPKGWKVMPLFRNIHHNSEF 351
+M T I E R I+ D+E +GF IPKG ++ ++ +
Sbjct: 327 DQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAV 386
Query: 352 FSEPQKVDPSRFKVAP----RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEV 407
+ +P + P F A +P F+PF G AC G LA++E+ + L+ F + V
Sbjct: 387 WEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSV 446
Query: 408 VGSQ 411
Q
Sbjct: 447 PTGQ 450
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 163/424 (38%), Gaps = 47/424 (11%)
Query: 26 FATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFF--KPTYPKSKEKIIGPSAL 83
F ++R+G++F + P V+L A + L TH +P P ++ GP +
Sbjct: 36 FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQ 95
Query: 84 FFHQADYHARLRKLVQSSLSPER--------IKKLIPDIEAIAISA-------------L 122
A Y R+ + S+S R +++ + + A +A L
Sbjct: 96 GVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGL 155
Query: 123 ESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNSFPS--NIP 180
AV VI + ++F +D F L D +E LK+ + + N+ P +IP
Sbjct: 156 LDKAVSNVIASLTCGRRFEYDD---PRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIP 212
Query: 181 GTA-----YHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGR---TLTE 232
A + KA L +L ++++E L KG + +
Sbjct: 213 ALAGKVLRFQKAFLT--QLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFND 270
Query: 233 DQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWA 292
+ + + + A TT++ L W L + +P + V+ E V G R
Sbjct: 271 ENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDV----IGQVRRPEMG 326
Query: 293 QTKNMRCTYRFILESMRMASIISFTFREAVC-DVEYKGFLIPKGWKVMPLFRNIHHNSEF 351
+M T I E R I+ D+E +GF IPKG ++ ++ +
Sbjct: 327 DQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAV 386
Query: 352 FSEPQKVDPSRFKVAP----RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEV 407
+ +P + P F A +P F+PF G AC G LA++E+ + L+ F + V
Sbjct: 387 WEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSV 446
Query: 408 VGSQ 411
Q
Sbjct: 447 PTGQ 450
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 190 ARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNS------RDEKGRTLTEDQIADNIIGVL 243
AR L +I+SEII LL+ RD G ++ ++ I+ +
Sbjct: 218 ARTELQKILSEIIIARKAAAVNKDSSTSDLLSGLLSAVYRD--GTPMSLHEVCGMIVAAM 275
Query: 244 FAAQDTTASVLTW-ILKYLH-DNPKLLEAVKAE-QKVVHESN-NGGQRALTWAQTKNMRC 299
FA Q T++ TW +L +H N K LEA++ E ++ + N N + +A+ RC
Sbjct: 276 FAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE----RC 331
Query: 300 TYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVM--PLFRNIHHNSEFFSEPQK 357
ES+R + R+ + DV+ +++PKG + PL HH+ E F EP++
Sbjct: 332 AR----ESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLS--HHDEEAFPEPRR 385
Query: 358 VDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFR 404
DP R + F+ FG GVH C G + L++ + L T FR
Sbjct: 386 WDPERDEKV--EGAFIGFGAGVHKCIGQKFGLLQVKTI---LATAFR 427
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/472 (22%), Positives = 185/472 (39%), Gaps = 63/472 (13%)
Query: 3 PGSMGWPFIGETLQIY----SQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFV 58
PG WP +G L+I+ + + A K+YG+IF+ + V L SP + +
Sbjct: 27 PGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEAL 86
Query: 59 LATHAHF-----FKP--TYPKSKEKIIGPSALFFHQADYHARLRKLVQSSL-SPERIKKL 110
T + KP Y + + G L + R+R Q L P I KL
Sbjct: 87 YRTESAHPQRLEIKPWKAYRDHRNEAYG---LMILEGQEWQRVRSAFQKKLMKPVEIMKL 143
Query: 111 IPDIEAIAISALESC-----AVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNY 165
I + LE G++ + + E+ K+SF+ L ++ +++ ++
Sbjct: 144 DKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEA 203
Query: 166 LIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDE 225
L + S G + KRL+ V + C+ N
Sbjct: 204 LTFITAIKTMMSTF-GKMMVTPVELHKRLNTKVWQ--AHTLAWDTIFKSVKPCIDNRLQR 260
Query: 226 KGRT--------------LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAV 271
+ L++ ++ + + AA +TTA+ L WIL L NP+
Sbjct: 261 YSQQPGADFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQ----- 315
Query: 272 KAEQKVVHE-----SNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVE 326
A+++++ E +N RA +NM + ESMR+ + FT R
Sbjct: 316 -AQRRLLQEVQSVLPDNQTPRA---EDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTV 371
Query: 327 YKGFLIPKGWKVMPLFRNIHHNSE-FFSEPQKVDPSRFKVAPR---PNTFVPFGLGVHAC 382
+ +PKG V+ L + +SE F + K P R+ + P +PFG+G C
Sbjct: 372 LGEYALPKG-TVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINPFAHLPFGIGKRMC 430
Query: 383 PGNELAKLEMLILIHHLVTEFRWEVVGSQNG----IQYGPFPVPEKGLPARF 430
G LA+L++ + + ++ ++ ++V + N + G VP + LP F
Sbjct: 431 IGRRLAELQLHLALCWIIQKY--DIVATDNEPVEMLHLGIL-VPSRELPIAF 479
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 190 ARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNS------RDEKGRTLTEDQIADNIIGVL 243
AR L +I+SEII LL+ RD G ++ ++ I+ +
Sbjct: 205 ARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRD--GTPMSLHEVCGMIVAAM 262
Query: 244 FAAQDTTASVLTW-ILKYLH-DNPKLLEAVKAE-QKVVHESN-NGGQRALTWAQTKNMRC 299
FA Q T++ TW +L +H N K LEA++ E ++ + N N + +A+ RC
Sbjct: 263 FAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE----RC 318
Query: 300 TYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVM--PLFRNIHHNSEFFSEPQK 357
ES+R + R+ + DV+ +++PKG + PL HH+ E F EP++
Sbjct: 319 AR----ESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLS--HHDEEAFPEPRR 372
Query: 358 VDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFR 404
DP R + F+ FG GVH C G + L++ + L T FR
Sbjct: 373 WDPERDEKV--EGAFIGFGAGVHKCIGQKFGLLQVKTI---LATAFR 414
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 190 ARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNS------RDEKGRTLTEDQIADNIIGVL 243
AR L +I+SEII LL+ RD G ++ ++ I+ +
Sbjct: 206 ARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRD--GTPMSLHEVCGMIVAAM 263
Query: 244 FAAQDTTASVLTW-ILKYLH-DNPKLLEAVKAE-QKVVHESN-NGGQRALTWAQTKNMRC 299
FA Q T++ TW +L +H N K LEA++ E ++ + N N + +A+ RC
Sbjct: 264 FAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE----RC 319
Query: 300 TYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVM--PLFRNIHHNSEFFSEPQK 357
ES+R + R+ + DV+ +++PKG + PL HH+ E F EP++
Sbjct: 320 AR----ESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLS--HHDEEAFPEPRR 373
Query: 358 VDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFR 404
DP R + F+ FG GVH C G + L++ + L T FR
Sbjct: 374 WDPERDEKV--EGAFIGFGAGVHKCIGQKFGLLQVKTI---LATAFR 415
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 178/444 (40%), Gaps = 60/444 (13%)
Query: 1 LPPGSMGW-PFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVL 59
LPP G PF+G +Q + +DP F +K+YG IF +I G ++ +
Sbjct: 4 LPPVVHGTTPFVGHIIQ-FGKDPLGFMLKAKKKYGGIFTMNICGNRITVVGD-------V 55
Query: 60 ATHAHFFKPTYPKSKEKIIGPSALF------FHQADYHA----RLRK---LVQSSLSPER 106
H+ FF P + +I+ P ++ F + +A R+R+ + L+ +
Sbjct: 56 HQHSKFFTP-----RNEILSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVAK 110
Query: 107 IKKLIPDIEAIA---ISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLK- 162
+ P I+ + A + G+ IN + + +FG + R++L
Sbjct: 111 FQNFAPSIQHEVRKFMKANWNKDEGE-INILDDCSAMIINTACQCLFG---EDLRKRLDA 166
Query: 163 ----------QNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXX 212
++ LI + + +P ++ AR L I+SEII
Sbjct: 167 RQFAQLLAKMESCLIPAAVFLPWILKLPLPQSYRCRDARAELQDILSEIIIAREKEEAQK 226
Query: 213 XXXX----GCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLL 268
LL + G +++ ++ I+ +FA Q T+ TW L +L D
Sbjct: 227 DTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKR 286
Query: 269 EAVKAEQKVVHESNNGGQRALTWAQT-KNMRCTYRFILESMRMASIISFTFREAVCDVEY 327
K +H+ + L + + M + ES+R + R+ + V+
Sbjct: 287 HLAK-----LHQEIDEFPAQLNYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQV 341
Query: 328 KGFLIPKGWKVM--PLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGN 385
+++P+G + PL H + E F P++ +P R + F FG GVH C G
Sbjct: 342 GKYVVPEGDIIACSPLLS--HQDEEAFPNPREWNPER-NMKLVDGAFCGFGAGVHKCIGE 398
Query: 386 ELAKLEMLILIHHLVTEFRWEVVG 409
+ L++ ++ ++ ++ +E++G
Sbjct: 399 KFGLLQVKTVLATVLRDYDFELLG 422
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 190 ARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNS------RDEKGRTLTEDQIADNIIGVL 243
AR L +I+SEII LL+ RD G ++ ++ I+ +
Sbjct: 218 ARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRD--GTPMSLHEVCGMIVAAM 275
Query: 244 FAAQDTTASVLTW-ILKYLH-DNPKLLEAVKAE-QKVVHESN-NGGQRALTWAQTKNMRC 299
FA Q T++ TW +L +H N K LEA++ E ++ + N N + +A+ RC
Sbjct: 276 FAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE----RC 331
Query: 300 TYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVM--PLFRNIHHNSEFFSEPQK 357
ES+R + R+ + DV+ +++PKG + PL HH+ E F EP++
Sbjct: 332 AR----ESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLS--HHDEEAFPEPRR 385
Query: 358 VDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFR 404
DP R + F+ FG GVH C G + L++ + L T FR
Sbjct: 386 WDPERDEKV--EGAFIGFGAGVHKCIGQKFGLLQVKTI---LATAFR 427
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 190 ARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNS------RDEKGRTLTEDQIADNIIGVL 243
AR L +I+SEII LL+ RD G ++ ++ I+ +
Sbjct: 204 ARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRD--GTPMSLHEVCGMIVAAM 261
Query: 244 FAAQDTTASVLTW-ILKYLH-DNPKLLEAVKAE-QKVVHESN-NGGQRALTWAQTKNMRC 299
FA Q T++ TW +L +H N K LEA++ E ++ + N N + +A+ RC
Sbjct: 262 FAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE----RC 317
Query: 300 TYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVM--PLFRNIHHNSEFFSEPQK 357
ES+R + R+ + DV+ +++PKG + PL HH+ E F EP++
Sbjct: 318 AR----ESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLS--HHDEEAFPEPRR 371
Query: 358 VDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFR 404
DP R + F+ FG GVH C G + L++ + L T FR
Sbjct: 372 WDPERDEKV--EGAFIGFGAGVHKCIGQKFGLLQVKTI---LATAFR 413
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 171/444 (38%), Gaps = 57/444 (12%)
Query: 31 KRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKSKEKIIGPSALFFHQADY 90
++YG I++ + V + PE A FK P + E+ + P + +HQ Y
Sbjct: 40 QKYGPIYREKLGNVESVYVIDPEDV-------ALLFKSEGP-NPERFLIPPWVAYHQ--Y 89
Query: 91 HAR-----LRK----------LVQSSLSPERIKKLIPDIEAIA---ISAL----ESCAVG 128
+ R L+K L Q ++PE K +P ++A++ +S L + G
Sbjct: 90 YQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSG 149
Query: 129 QVINTF-KEMKKFSFDVGILSIFGNLDDSYREKLK-QNYLIVDKGYNSFPSNIPGTAYHK 186
++ +F+F+ IFG E + + +D Y F +++P
Sbjct: 150 NYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPP 209
Query: 187 ALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSR-------DEKG---RTLTE---- 232
L R + R D +G R L +
Sbjct: 210 DLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGDSKMS 269
Query: 233 -DQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTW 291
+ I N+ +L DTT+ L W L + N K+ + ++AE G A
Sbjct: 270 FEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDM-ATML 328
Query: 292 AQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEF 351
++ + I E++R+ I R V D+ + ++IP V + F
Sbjct: 329 QLVPLLKAS---IKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTF 385
Query: 352 FSEPQKVDPSRFKVAPRPNTF---VPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVV 408
F +P+ DP+R+ + T+ + FG GV C G +A+LEM I + +++ FR E+
Sbjct: 386 FFDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQ 445
Query: 409 G-SQNGIQYGPFPVPEKGLPARFW 431
S G + +PEK + FW
Sbjct: 446 HLSDVGTTFNLILMPEKPISFTFW 469
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 190 ARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNS------RDEKGRTLTEDQIADNIIGVL 243
AR L +I+SEII LL+ RD G ++ ++ I+ +
Sbjct: 205 ARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRD--GTPMSLHEVCGMIVAAM 262
Query: 244 FAAQDTTASVLTW-ILKYLH-DNPKLLEAVKAE-QKVVHESN-NGGQRALTWAQTKNMRC 299
FA Q T++ TW +L +H N K LEA++ E ++ + N N + +A+ RC
Sbjct: 263 FAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE----RC 318
Query: 300 TYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVM--PLFRNIHHNSEFFSEPQK 357
ES+R + R+ + DV+ +++PKG + PL HH+ E F EP++
Sbjct: 319 AR----ESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLS--HHDEEAFPEPRR 372
Query: 358 VDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFR 404
DP R + F+ FG GVH C G + L++ + L T FR
Sbjct: 373 WDPERDEKV--EGAFIGFGAGVHKCIGQKFGLLQVKTI---LATAFR 414
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 170/444 (38%), Gaps = 57/444 (12%)
Query: 31 KRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKSKEKIIGPSALFFHQADY 90
++YG I++ + V + PE A FK P + E+ + P + +HQ Y
Sbjct: 43 QKYGPIYREKLGNVESVYVIDPEDV-------ALLFKSEGP-NPERFLIPPWVAYHQ--Y 92
Query: 91 HAR-----LRK----------LVQSSLSPERIKKLIPDIEAIA---ISAL----ESCAVG 128
+ R L+K L Q ++PE K +P ++A++ +S L + G
Sbjct: 93 YQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSG 152
Query: 129 QVINTF-KEMKKFSFDVGILSIFGNLDDSYREKLK-QNYLIVDKGYNSFPSNIPGTAYHK 186
++ +F+F+ IFG E + + +D Y F +++P
Sbjct: 153 NYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPP 212
Query: 187 ALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSR-------DEKG---RTLTE---- 232
L R + R D +G R L +
Sbjct: 213 DLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGDSKMS 272
Query: 233 -DQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTW 291
+ I N+ +L DTT+ L W L + N K+ + ++AE G +
Sbjct: 273 FEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATML- 331
Query: 292 AQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEF 351
+ + I E++R+ I R V D+ + ++IP V + F
Sbjct: 332 ---QLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTF 388
Query: 352 FSEPQKVDPSRFKVAPRPNTF---VPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVV 408
F +P+ DP+R+ + T+ + FG GV C G +A+LEM I + +++ FR E+
Sbjct: 389 FFDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQ 448
Query: 409 G-SQNGIQYGPFPVPEKGLPARFW 431
S G + +PEK + FW
Sbjct: 449 HLSDVGTTFNLILMPEKPISFTFW 472
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 218 CLLNSRDEKGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQK 276
C DE D+ NI+ LF A DT + ++W L YL NP++ ++ E
Sbjct: 262 CQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELD 321
Query: 277 VVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVC-DVEYKGFLIPKG 335
V G R + ++ FILE+ R +S + FT + D KGF IPKG
Sbjct: 322 TV----IGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKG 377
Query: 336 WKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPR-------PNTFVPFGLGVHACPGNELA 388
V I+H+ + + P + P RF + P + FG+G C G +A
Sbjct: 378 RCVFVNQWQINHDQKLWVNPSEFLPERF-LTPDGAIDKVLSEKVIIFGMGKRKCIGETIA 436
Query: 389 KLEMLILIHHLVTEFRWEV 407
+ E+ + + L+ + V
Sbjct: 437 RWEVFLFLAILLQRVEFSV 455
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 2 PPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLAT 61
PPG GWP IG L + ++P++ + ++YG++ + I P V+L+ + + L
Sbjct: 13 PPGPWGWPLIGHMLTL-GKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVR 71
Query: 62 HAHFFK 67
FK
Sbjct: 72 QGDDFK 77
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 11/172 (6%)
Query: 238 NIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAE-QKVVHESNNGGQRALTWAQTKN 296
++ + FA +TT++ L + + P + E V+ E ++V+ G R
Sbjct: 272 TVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI-----GSHRPPALDDRAK 326
Query: 297 MRCTYRFILESMRMASIISFTFREAVC-DVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEP 355
M T I E R+ +I F V D +++G++IPK +V P+ + H+ +F P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 356 QKVDPSRFKVA----PRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
+P F A R F+PF LG C G +A+ E+ + ++ F
Sbjct: 387 NTFNPGHFLDANGALKRNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNF 438
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG P +G LQ+ + F +++YG++F ++ P V+L +A + L
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 61 THAHFF 66
A F
Sbjct: 71 DQAEAF 76
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 11/172 (6%)
Query: 238 NIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAE-QKVVHESNNGGQRALTWAQTKN 296
++ + FA +TT++ L + + P + E V+ E ++V+ G R
Sbjct: 272 TVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI-----GSHRPPALDDRAK 326
Query: 297 MRCTYRFILESMRMASIISFTFREAVC-DVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEP 355
M T I E R+ +I F V D +++G++IPK +V P+ + H+ +F P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 356 QKVDPSRFKVA----PRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
+P F A R F+PF LG C G +A+ E+ + ++ F
Sbjct: 387 NTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG P +G LQ+ + F +++YG++F ++ P V+L +A + L
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 61 THAHFF 66
A F
Sbjct: 71 DQAEAF 76
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 27/182 (14%)
Query: 228 RTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQR 287
R +T ++ N++ ++ DTT + +T + LH NP +KA +V
Sbjct: 248 RNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPALVET------- 300
Query: 288 ALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHH 347
+ E +R + ++ R A+ D E G I KG KV+ + + +
Sbjct: 301 ---------------MVPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNR 345
Query: 348 NSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEF-RWE 406
+ E P++ R PRP + FG G+H C GN LA++++ IL ++T F R E
Sbjct: 346 DDEVIDRPEEFIIDR----PRPRQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIE 401
Query: 407 VV 408
V+
Sbjct: 402 VM 403
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 11/172 (6%)
Query: 238 NIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAE-QKVVHESNNGGQRALTWAQTKN 296
++ + FA +TT++ L + + P + E V+ E ++V+ G R
Sbjct: 272 TVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI-----GSHRPPALDDRAK 326
Query: 297 MRCTYRFILESMRMASIISFTFREAVC-DVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEP 355
M T I E R+ +I F V D +++G++IPK +V P+ + H+ +F P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 356 QKVDPSRFKVA----PRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
+P F A R F+PF LG C G +A+ E+ + ++ F
Sbjct: 387 NTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG P +G LQ+ + F +++YG++F ++ P V+L +A + L
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 61 THAHFF 66
A F
Sbjct: 71 DQAEAF 76
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 223 RDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESN 282
+++ T +++ + ++ ++ A +TT +VL W + ++ P + V+ E ++ N
Sbjct: 262 KNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPN 321
Query: 283 NGGQRALTWAQTKNMRCTYRFILESMRMASIISF-TFREAVCDVEYKGFLIPKGWKVMPL 341
+W M T + E +R +I+ F D +G+ IPKG V+
Sbjct: 322 GKP----SWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITN 377
Query: 342 FRNIHHNSEFFSEPQKVDPSRFKVA----PRPNTFVPFGLGVHACPGNELAKLEMLILIH 397
++H + +++ +P+ P RF + + VPF LG C G LA++EM +
Sbjct: 378 LYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFT 437
Query: 398 HLVTEF 403
L+ F
Sbjct: 438 ALLQRF 443
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 14 TLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFF--KPTYP 71
+L S+ P+V+ + + YGEIF + G V+L + K L + F +P P
Sbjct: 28 SLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP 87
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 223 RDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESN 282
+++ T +++ + ++ ++ A +TT +VL W + ++ P + V+ E ++ N
Sbjct: 262 KNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPN 321
Query: 283 NGGQRALTWAQTKNMRCTYRFILESMRMASIISF-TFREAVCDVEYKGFLIPKGWKVMPL 341
+W M T + E +R +I+ F D +G+ IPKG V+
Sbjct: 322 GKP----SWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITN 377
Query: 342 FRNIHHNSEFFSEPQKVDPSRFKVA----PRPNTFVPFGLGVHACPGNELAKLEMLILIH 397
++H + +++ +P+ P RF + + VPF LG C G LA++EM +
Sbjct: 378 LYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFT 437
Query: 398 HLVTEF 403
L+ F
Sbjct: 438 ALLQRF 443
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 14 TLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFF--KPTYP 71
+L S+ P+V+ + + YGEIF + G V+L + K L + F +P P
Sbjct: 28 SLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP 87
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 6/187 (3%)
Query: 225 EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
EK LT + + I+ +L AA DT + L ++L + +P + EA+ E + V
Sbjct: 286 EKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVI----- 340
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
G+R + + ++ FI ESMR ++ R+A+ D G+ + KG ++ L
Sbjct: 341 GERDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNII-LNIG 399
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFR 404
H EFF +P + F F PFG G C G +A + M ++ L+ F
Sbjct: 400 RMHRLEFFPKPNEFTLENFAKNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFH 459
Query: 405 WEVVGSQ 411
+ + Q
Sbjct: 460 VKTLQGQ 466
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 218 CLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKV 277
LL + G + + I + + A DTT+S + L NP+ L K++ +
Sbjct: 240 SLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPAL 299
Query: 278 VHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWK 337
+ R + E++R + + R A+ D E +G I +G +
Sbjct: 300 IP----------------------RLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDR 337
Query: 338 VMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIH 397
+M + + + + E FS P + D +RF PN + FG G H C G LAKLEM I
Sbjct: 338 IMLSYPSANRDEEVFSNPDEFDITRF-----PNRHLGFGWGAHMCLGQHLAKLEMKIFFE 392
Query: 398 HLVTEFR 404
L+ + +
Sbjct: 393 ELLPKLK 399
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 224 DEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNN 283
D+ L+++ I I + A +TT SV+ W L +L NP++ + + E + N
Sbjct: 263 DQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEI----DQNV 318
Query: 284 GGQRALTWAQTKNMRCTYRFILESMRMASIISFTF-REAVCDVEYKGFLIPKGWKVMPLF 342
G R T + + I E +R+ + +A D F + KG +V+
Sbjct: 319 GFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINL 378
Query: 343 RNIHHNSEFFSEPQKVDPSRF------KVAPRPNTFVPFGLGVHACPGNELAKLEMLILI 396
+HHN + + +P + P RF ++ +++PFG G +C G LA+ E+ +++
Sbjct: 379 WALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIM 438
Query: 397 HHLVTEFRWEV 407
L+ F EV
Sbjct: 439 AWLLQRFDLEV 449
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Query: 238 NIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAE-QKVVHESNNGGQRALTWAQTKN 296
++ + A +TT++ L + + P + E V+ E ++V+ G R
Sbjct: 272 TVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI-----GSHRPPALDDRAK 326
Query: 297 MRCTYRFILESMRMASIISFTFREAVC-DVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEP 355
M T I E R+ +I F V D +++G++IPK +V P+ + H+ +F P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 356 QKVDPSRFKVA----PRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
+P F A R F+PF LG C G +A+ E+ + ++ F
Sbjct: 387 NTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
LPPG P +G LQ+ + F +++YG++F ++ P V+L +A + L
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 61 THAHFF 66
A F
Sbjct: 71 DQAEAF 76
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/415 (19%), Positives = 174/415 (41%), Gaps = 42/415 (10%)
Query: 31 KRYGEIFKTHILGCPCVMLASPEAAK-FVLAT----HAHFFKPTYPKSKEKIIGPSALFF 85
K+YG + + ++ V++ SPE+ K F+++T + ++ E++ G +
Sbjct: 21 KKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSE 80
Query: 86 HQADYHARLRKLVQSSLSPERIKKLIPDIEAIA---ISALESCAVGQVINTFKEMKKFS- 141
+ + R+++ + S + L+ A + LE+ A GQ + ++M ++
Sbjct: 81 CNYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTA 140
Query: 142 FDVGILSIFG---NLDDSYREKLKQNYLIVDKGY----NSFPSNIPGTAYHKALLARKRL 194
D+ + FG ++ ++ L Q ++ +G N+ +PG RK+L
Sbjct: 141 MDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLPG--------KRKQL 192
Query: 195 SQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLT-----------EDQIADNIIGVL 243
++ I L + LT ++ + DN +
Sbjct: 193 REVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDDEGLLDNFVTFF 252
Query: 244 FAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRF 303
A +T+A+ L + + L P+++ ++AE V G +R L + ++ +
Sbjct: 253 IAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVI----GSKRYLDFEDLGRLQYLSQV 308
Query: 304 ILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRF 363
+ ES+R+ TFR + G +P ++ + +F +P +P RF
Sbjct: 309 LKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRF 368
Query: 364 K-VAPRPN-TFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVV-GSQNGIQ 415
AP+P T+ PF LG +C G + A++E+ +++ L+ + +V G + G+Q
Sbjct: 369 GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQ 423
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 171/439 (38%), Gaps = 63/439 (14%)
Query: 9 PFIGETLQIYSQDPNVFFA-TKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFK 67
PF+G +Q + ++P F K+ +F I G ++ P H+ FF
Sbjct: 17 PFLGHIVQ-FGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPH-------EHSRFFS 68
Query: 68 PT----YPKSKEKIIGPSALFFHQADYHA---RLRK---LVQSSLSPERIKKLIPDI--E 115
P P+ I+ P +F Y A R+R+ + L+ + + +P I E
Sbjct: 69 PRNEILSPREVYTIMTP--VFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHE 126
Query: 116 AIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYL--IVDKGYN 173
A VIN ++ + +FG + R++L + ++ K +
Sbjct: 127 VRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFG---EDLRKRLNARHFAQLLSKMES 183
Query: 174 SFPSNIPGTAYHKALL------------ARKRLSQIVSEIICXXXXXXXX----XXXXXG 217
S IP + LL AR L +I+ EII G
Sbjct: 184 SL---IPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLG 240
Query: 218 CLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTW-ILKYLH-DNPKLLEAVKAEQ 275
LL + G ++ ++ I+ +FA Q T+ +W +L +H N K L+ +
Sbjct: 241 GLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKL---- 296
Query: 276 KVVHESNNGGQRALTWAQTKN-MRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPK 334
H+ + L + + M R + ES+R + R +V+ +++PK
Sbjct: 297 ---HKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPK 353
Query: 335 GWKVM--PLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEM 392
G + PL HH+ E F P+ DP R + F+ FG GVH C G + A L++
Sbjct: 354 GDIIACSPLLS--HHDEEAFPNPRLWDPERDEKVD--GAFIGFGAGVHKCIGQKFALLQV 409
Query: 393 LILIHHLVTEFRWEVVGSQ 411
++ E+ ++++ +
Sbjct: 410 KTILATAFREYDFQLLRDE 428
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 127/328 (38%), Gaps = 52/328 (15%)
Query: 79 GPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALESC-AVGQVINTFKEM 137
G +L + H RKL+ + R++ L P+I+ I L++ A G ++ K
Sbjct: 83 GRGSLLWQDEPEHTSDRKLLAKEFTVRRMQALRPNIQRIVDEHLDAIEARGGPVDLVKTF 142
Query: 138 KKFSFDVGILSIFGNLDDSYRE--KLKQNYLIVDKGYNSFPS---NIPGTAYHKALLARK 192
+ I +FG + E + + + VD+ + + + G Y L ++
Sbjct: 143 ANAVPSMVISDLFGVPVERRAEFQDIAEAMMRVDQDAAATEAAGMRLGGLLYQ---LVQE 199
Query: 193 RLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIG-VLFAAQDTTA 251
R + ++I L+ + D G + +D N G +L AA DTTA
Sbjct: 200 RRANPGDDLIS--------------ALITTEDPDG--VVDDMFLMNAAGTLLIAAHDTTA 243
Query: 252 SVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMA 311
++ L D+P L ++ + +V + R LT Q R R
Sbjct: 244 CMIGLGTALLLDSPDQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATR--------- 294
Query: 312 SIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNT 371
DVE G I KG +V+ + F EP+ RF + RP
Sbjct: 295 ------------DVELGGVRIAKGEQVVAHVLAADFDPAFVEEPE-----RFDITRRPAP 337
Query: 372 FVPFGLGVHACPGNELAKLEMLILIHHL 399
+ FG G H C G +LA++E+ I+ L
Sbjct: 338 HLAFGFGAHQCIGQQLARIELQIVFETL 365
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 127/328 (38%), Gaps = 52/328 (15%)
Query: 79 GPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALESC-AVGQVINTFKEM 137
G +L + H RKL+ + R++ L P+I+ I L++ A G ++ K
Sbjct: 83 GRGSLLWQDEPEHTSDRKLLAKEFTVRRMQALRPNIQRIVDEHLDAIEARGGPVDLVKTF 142
Query: 138 KKFSFDVGILSIFGNLDDSYRE--KLKQNYLIVDKGYNSFPS---NIPGTAYHKALLARK 192
+ I +FG + E + + + VD+ + + + G Y L ++
Sbjct: 143 ANAVPSMVISDLFGVPVERRAEFQDIAEAMMRVDQDAAATEAAGMRLGGLLYQ---LVQE 199
Query: 193 RLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIG-VLFAAQDTTA 251
R + ++I L+ + D G + +D N G +L AA DTTA
Sbjct: 200 RRANPGDDLIS--------------ALITTEDPDG--VVDDMFLMNAAGTLLIAAHDTTA 243
Query: 252 SVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMA 311
++ L D+P L ++ + +V + R LT Q R R
Sbjct: 244 CMIGLGTALLLDSPDQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATR--------- 294
Query: 312 SIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNT 371
DVE G I KG +V+ + F EP+ RF + RP
Sbjct: 295 ------------DVELGGVRIAKGEQVVAHVLAADFDPAFVEEPE-----RFDITRRPAP 337
Query: 372 FVPFGLGVHACPGNELAKLEMLILIHHL 399
+ FG G H C G +LA++E+ I+ L
Sbjct: 338 HLAFGFGAHQCIGQQLARIELQIVFETL 365
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 127/328 (38%), Gaps = 52/328 (15%)
Query: 79 GPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALESC-AVGQVINTFKEM 137
G +L + H RKL+ + R++ L P+I+ I L++ A G ++ K
Sbjct: 83 GRGSLLWQDEPEHTSDRKLLAKEFTVRRMQALRPNIQRIVDEHLDAIEARGGPVDLVKTF 142
Query: 138 KKFSFDVGILSIFGNLDDSYRE--KLKQNYLIVDKGYNSFPS---NIPGTAYHKALLARK 192
+ I +FG + E + + + VD+ + + + G Y L ++
Sbjct: 143 ANAVPSMVISDLFGVPVERRAEFQDIAEAMMRVDQDAAATEAAGMRLGGLLYQ---LVQE 199
Query: 193 RLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIG-VLFAAQDTTA 251
R + ++I L+ + D G + +D N G +L AA DTTA
Sbjct: 200 RRANPGDDLIS--------------ALITTEDPDG--VVDDMFLMNAAGTLLIAAHDTTA 243
Query: 252 SVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMA 311
++ L D+P L ++ + +V + R LT Q R R
Sbjct: 244 CMIGLGTALLLDSPDQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATR--------- 294
Query: 312 SIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNT 371
DVE G I KG +V+ + F EP+ RF + RP
Sbjct: 295 ------------DVELGGVRIAKGEQVVAHVLAADFDPAFVEEPE-----RFDITRRPAP 337
Query: 372 FVPFGLGVHACPGNELAKLEMLILIHHL 399
+ FG G H C G +LA++E+ I+ L
Sbjct: 338 HLAFGFGAHQCIGQQLARIELQIVFETL 365
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 171/439 (38%), Gaps = 63/439 (14%)
Query: 9 PFIGETLQIYSQDPNVFFA-TKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFK 67
PF+G +Q + ++P F K+ +F I G ++ P H+ FF
Sbjct: 26 PFLGHIVQ-FGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHE-------HSRFFS 77
Query: 68 PT----YPKSKEKIIGPSALFFHQADYHA---RLRK---LVQSSLSPERIKKLIPDI--E 115
P P+ I+ P +F Y A R+R+ + L+ + + +P I E
Sbjct: 78 PRNEILSPREVYTIMTP--VFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHE 135
Query: 116 AIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYL--IVDKGYN 173
A VIN ++ + +FG + R++L + ++ K +
Sbjct: 136 VRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFG---EDLRKRLNARHFAQLLSKMES 192
Query: 174 SFPSNIPGTAYHKALL------------ARKRLSQIVSEIICXXXXXXXX----XXXXXG 217
S IP + LL AR L +I+ EII G
Sbjct: 193 SL---IPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLG 249
Query: 218 CLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTW-ILKYLH-DNPKLLEAVKAEQ 275
LL + G ++ ++ I+ +FA Q T+ +W +L +H N K L+ +
Sbjct: 250 GLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKL---- 305
Query: 276 KVVHESNNGGQRALTWAQTKN-MRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPK 334
H+ + L + + M R + ES+R + R +V+ +++PK
Sbjct: 306 ---HKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPK 362
Query: 335 GWKVM--PLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEM 392
G + PL HH+ E F P+ DP R + F+ FG GVH C G + A L++
Sbjct: 363 GDIIACSPLLS--HHDEEAFPNPRLWDPERDEKVD--GAFIGFGAGVHKCIGQKFALLQV 418
Query: 393 LILIHHLVTEFRWEVVGSQ 411
++ E+ ++++ +
Sbjct: 419 KTILATAFREYDFQLLRDE 437
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 171/439 (38%), Gaps = 63/439 (14%)
Query: 9 PFIGETLQIYSQDPNVFFA-TKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFK 67
PF+G +Q + ++P F K+ +F I G ++ P H+ FF
Sbjct: 11 PFLGHIVQ-FGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPH-------EHSRFFS 62
Query: 68 PT----YPKSKEKIIGPSALFFHQADYHA---RLRK---LVQSSLSPERIKKLIPDI--E 115
P P+ I+ P +F Y A R+R+ + L+ + + +P I E
Sbjct: 63 PRNEILSPREVYTIMTP--VFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHE 120
Query: 116 AIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYL--IVDKGYN 173
A VIN ++ + +FG + R++L + ++ K +
Sbjct: 121 VRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFG---EDLRKRLNARHFAQLLSKMES 177
Query: 174 SFPSNIPGTAYHKALL------------ARKRLSQIVSEIICXXXXXXXX----XXXXXG 217
S IP + LL AR L +I+ EII G
Sbjct: 178 SL---IPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLG 234
Query: 218 CLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTW-ILKYLH-DNPKLLEAVKAEQ 275
LL + G ++ ++ I+ +FA Q T+ +W +L +H N K L+ +
Sbjct: 235 GLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKL---- 290
Query: 276 KVVHESNNGGQRALTWAQTKN-MRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPK 334
H+ + L + + M R + ES+R + R +V+ +++PK
Sbjct: 291 ---HKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPK 347
Query: 335 GWKVM--PLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEM 392
G + PL HH+ E F P+ DP R + F+ FG GVH C G + A L++
Sbjct: 348 GDIIACSPLLS--HHDEEAFPNPRLWDPERDEKVD--GAFIGFGAGVHKCIGQKFALLQV 403
Query: 393 LILIHHLVTEFRWEVVGSQ 411
++ E+ ++++ +
Sbjct: 404 KTILATAFREYDFQLLRDE 422
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 162/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 74 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 131
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 132 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 188
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 189 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 236
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 237 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 290
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 291 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 346
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G ACPG
Sbjct: 347 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACPG 403
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 404 QQFALHEATLVLGMMLKHFDFE 425
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 148/358 (41%), Gaps = 53/358 (14%)
Query: 72 KSKEKIIGPSALFFHQA--DYHARLR----KLVQ--SSLSPERIKKLIPDIEAIAISALE 123
K I+ PS F QA YHA + +LVQ L+ + ++ D+ + + +
Sbjct: 97 KKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKWERLNADEYIEVPEDMTRLTLDTIG 154
Query: 124 SCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQN--YLIVDKGYNSFPSNIPG 181
C N+F + F I+S+ LD+ + + N D+ F +I
Sbjct: 155 LCGFNYRFNSFYRDQPHPF---IISMIRALDEVMNKLQRANPDDPAYDENKRQFQEDI-- 209
Query: 182 TAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRD-EKGRTLTEDQIADNII 240
K ++ +V +II +LN +D E G L + I+ II
Sbjct: 210 ----------KVMNDLVDKIIADRKASGEQSDDLLTQMLNGKDPETGEPLDDGNISYQII 259
Query: 241 GVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL-----TWAQTK 295
L A +TT+ +L++ L +L NP +L+ V E R L ++ Q K
Sbjct: 260 TFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEE----------ATRVLVDPVPSYKQVK 309
Query: 296 NMRCTYRFILESMRM---ASIISFTFRE-AVCDVEYKGFLIPKGWKVMPLFRNIHHNSEF 351
++ + E++R+ A S +E V EY + KG +VM L +H +
Sbjct: 310 QLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYP---LEKGDEVMVLIPQLHRDKTI 366
Query: 352 FSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWE 406
+ + ++ P RF+ A + F PFG G AC G + A E +++ ++ F +E
Sbjct: 367 WGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 125/316 (39%), Gaps = 49/316 (15%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIA---ISALESCAVGQVINTFKEMKKFSFDVGIL 147
H RLRKLV + R++ L P ++ I + A+ + G+ E + + ++
Sbjct: 120 HTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRA--DLMESLAWPLPITVI 177
Query: 148 SIFGNLDDSYREKLK---QNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICX 204
S + + R + ++ D + + + Y L+ KR Q +++
Sbjct: 178 SELLGVPEPDRAAFRVWTDAFVFPDDPAQAQTAMAEMSGYLSRLIDSKR-GQDGEDLLS- 235
Query: 205 XXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDN 264
L+ + DE G LT +++ +L A +TT +++ + L +
Sbjct: 236 -------------ALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSH 282
Query: 265 PKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCD 324
P L A++A+ ++ +G + + TYRF +E
Sbjct: 283 PDQLAALRADMTLL----DGAVEEMLRYEGPVESATYRFPVEP----------------- 321
Query: 325 VEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPG 384
V+ G +IP G V+ + + H E F DP RF + + FG G+H C G
Sbjct: 322 VDLDGTVIPAGDTVLVVLADAHRTPERFP-----DPHRFDIRRDTAGHLAFGHGIHFCIG 376
Query: 385 NELAKLEMLILIHHLV 400
LA+LE I + L+
Sbjct: 377 APLARLEARIAVRALL 392
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 125/316 (39%), Gaps = 49/316 (15%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIA---ISALESCAVGQVINTFKEMKKFSFDVGIL 147
H RLRKLV + R++ L P ++ I + A+ + G+ E + + ++
Sbjct: 120 HTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRA--DLMESLAWPLPITVI 177
Query: 148 SIFGNLDDSYREKLK---QNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICX 204
S + + R + ++ D + + + Y L+ KR Q +++
Sbjct: 178 SELLGVPEPDRAAFRVWTDAFVFPDDPAQAQTAMAEMSGYLSRLIDSKR-GQDGEDLLS- 235
Query: 205 XXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDN 264
L+ + DE G LT +++ +L A +TT +++ + L +
Sbjct: 236 -------------ALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSH 282
Query: 265 PKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCD 324
P L A++A+ ++ +G + + TYRF +E
Sbjct: 283 PDQLAALRADMTLL----DGAVEEMLRYEGPVESATYRFPVEP----------------- 321
Query: 325 VEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPG 384
V+ G +IP G V+ + + H E F DP RF + + FG G+H C G
Sbjct: 322 VDLDGTVIPAGDTVLVVLADAHRTPERFP-----DPHRFDIRRDTAGHLAFGHGIHFCIG 376
Query: 385 NELAKLEMLILIHHLV 400
LA+LE I + L+
Sbjct: 377 APLARLEARIAVRALL 392
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 125/316 (39%), Gaps = 49/316 (15%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIA---ISALESCAVGQVINTFKEMKKFSFDVGIL 147
H RLRKLV + R++ L P ++ I + A+ + G+ E + + ++
Sbjct: 120 HTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRA--DLMESLAWPLPITVI 177
Query: 148 SIFGNLDDSYREKLK---QNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICX 204
S + + R + ++ D + + + Y L+ KR Q +++
Sbjct: 178 SELLGVPEPDRAAFRVWTDAFVFPDDPAQAQTAMAEMSGYLSRLIDSKR-GQDGEDLLS- 235
Query: 205 XXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDN 264
L+ + DE G LT +++ +L A +TT +++ + L +
Sbjct: 236 -------------ALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSH 282
Query: 265 PKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCD 324
P L A++A+ ++ +G + + TYRF +E
Sbjct: 283 PDQLAALRADMTLL----DGAVEEMLRYEGPVESATYRFPVEP----------------- 321
Query: 325 VEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPG 384
V+ G +IP G V+ + + H E F DP RF + + FG G+H C G
Sbjct: 322 VDLDGTVIPAGDTVLVVLADAHRTPERFP-----DPHRFDIRRDTAGHLAFGHGIHFCIG 376
Query: 385 NELAKLEMLILIHHLV 400
LA+LE I + L+
Sbjct: 377 APLARLEARIAVRALL 392
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 161/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGEFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 161/379 (42%), Gaps = 52/379 (13%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 76 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 133
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 134 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 190
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 191 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 238
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 239 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 292
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM-ASIISFTFREAVCDVEYKGF 330
E+ R L ++ Q K ++ + E++R+ ++ +F+ V +
Sbjct: 293 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEY 348
Query: 331 LIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPGNEL 387
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G +
Sbjct: 349 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQF 408
Query: 388 AKLEMLILIHHLVTEFRWE 406
A E +++ ++ F +E
Sbjct: 409 ALHEATLVLGMMLKHFDFE 427
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 83/183 (45%), Gaps = 6/183 (3%)
Query: 224 DEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNN 283
+E L E + +++ + +TTAS L+W + +L +P++ + ++++ E
Sbjct: 269 EEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQR--RLQEELDRELGP 326
Query: 284 GGQ-RALTWAQTKNMRCTYRFILESMRMASIISFTF-REAVCDVEYKGFLIPKGWKVMPL 341
G +T+ + I E +R+ ++ G+ IP+G V+P
Sbjct: 327 GASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPN 386
Query: 342 FRNIHHNSEFFSEPQKVDPSRFKVAPRPN-TFVPFGLGVHACPGNELAKLEMLILIHHLV 400
+ H + + +P + P RF + P N + + FG G C G LA+LE+ +++ L+
Sbjct: 387 LQGAHLDETVWEQPHEFRPDRF-LEPGANPSALAFGCGARVCLGESLARLELFVVLARLL 445
Query: 401 TEF 403
F
Sbjct: 446 QAF 448
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 123/357 (34%), Gaps = 94/357 (26%)
Query: 79 GPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMK 138
GP++ F H RLR LV + +P IK+L P+I A+ + L G N +
Sbjct: 93 GPASFLFLDPPDHTRLRGLVSKAFAPRVIKRLEPEITAL-VDQLLDAVDGPEFNLIDNLA 151
Query: 139 KFSFDVGILSIF-----------------------------GNLDDSYREKLKQNYLIVD 169
+ V ++ G D + E++K + D
Sbjct: 152 -YPLPVAVICRLLGVPIEDEPKFSRASALLAAALDPFLALTGETSDLFDEQMKAGMWLRD 210
Query: 170 KGYNSFPSNIPGTAYHKALLARKRLS---QIVSEIICXXXXXXXXXXXXXGCLLNSRDEK 226
Y +AL+ +R + ++S ++ +E
Sbjct: 211 --------------YLRALIDERRRTPGEDLMSGLVAV-------------------EES 237
Query: 227 GRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQ 286
G LTED+I +L A +TT +++ + P A+ A+ G
Sbjct: 238 GDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAAD----------GS 287
Query: 287 RALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIH 346
RA I E+MR + R A D+ +PKG ++ L H
Sbjct: 288 RASA------------VIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAH 335
Query: 347 HNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
+ P + DP R ++ + FG G H C G LA+LE + + L F
Sbjct: 336 RDPTIVGAPDRFDPDRAQI-----RHLGFGKGAHFCLGAPLARLEATVALPALAARF 387
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 161/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACEG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 161/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 76 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 133
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 134 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 190
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 191 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 238
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 239 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 292
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 293 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 348
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 349 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 405
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 406 QQFALHEATLVLGMMLKHFDFE 427
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 161/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 161/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 161/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 74 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 131
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 132 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 188
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 189 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 236
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 237 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 290
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 291 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 346
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 347 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 403
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 404 QQFALHEATLVLGMMLKHFDFE 425
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 149/358 (41%), Gaps = 53/358 (14%)
Query: 72 KSKEKIIGPSALFFHQA--DYHARLR----KLVQ--SSLSPERIKKLIPDIEAIAISALE 123
K I+ PS F QA YHA + +LVQ L+ + ++ D+ + + +
Sbjct: 97 KKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIG 154
Query: 124 SCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQN--YLIVDKGYNSFPSNIPG 181
C N+F + F I S+ LD++ + + N D+ F +I
Sbjct: 155 LCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDI-- 209
Query: 182 TAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRD-EKGRTLTEDQIADNII 240
K ++ +V +II +LN +D E G L ++ I II
Sbjct: 210 ----------KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 241 GVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL-----TWAQTK 295
L A +TT+ +L++ L +L NP +L QK E+ R L ++ Q K
Sbjct: 260 TFLIAGHETTSGLLSFALYFLVKNPHVL------QKAAEEA----ARVLVDPVPSYKQVK 309
Query: 296 NMRCTYRFILESMRM---ASIISFTFRE-AVCDVEYKGFLIPKGWKVMPLFRNIHHNSEF 351
++ + E++R+ A S +E V EY + KG ++M L +H +
Sbjct: 310 QLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYP---LEKGDELMVLIPQLHRDKTI 366
Query: 352 FSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWE 406
+ + ++ P RF+ A + F PFG G AC G + A E +++ ++ F +E
Sbjct: 367 WGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 161/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 26/228 (11%)
Query: 192 KRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTT 250
K ++ +V +II +LN +D E G L ++ I II L A +TT
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 270
Query: 251 ASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL-----TWAQTKNMRCTYRFIL 305
+ +L++ L +L NP +L QK E+ R L ++ Q K ++ +
Sbjct: 271 SGLLSFALYFLVKNPHVL------QKAAEEA----ARVLVDPVPSYKQVKQLKYVGMVLN 320
Query: 306 ESMRM---ASIISFTFRE-AVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDP 360
E++R+ A S +E V EY + KG ++M L +H + + + ++ P
Sbjct: 321 EALRLWPTAPAFSLYAKEDTVLGGEYP---LEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 361 SRFK--VAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWE 406
RF+ A + F PFG G AC G + A E +++ ++ F +E
Sbjct: 378 ERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 161/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 KQFALHEATLVLGMMLKHFDFE 424
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 304 ILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRF 363
I E +R + + R D E+ G + G K+M LF + + + F EP+K F
Sbjct: 267 IEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEK-----F 321
Query: 364 KVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV 400
V PN+ + FG G H C GN+LA+LE+ ++ ++
Sbjct: 322 DVQRNPNSHLAFGFGTHFCLGNQLARLELSLMTERVL 358
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 161/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 161/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 149/358 (41%), Gaps = 53/358 (14%)
Query: 72 KSKEKIIGPSALFFHQA--DYHARLR----KLVQ--SSLSPERIKKLIPDIEAIAISALE 123
K I+ PS F QA YHA + +LVQ L+ + ++ D+ + + +
Sbjct: 97 KKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIG 154
Query: 124 SCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQN--YLIVDKGYNSFPSNIPG 181
C N+F + F I S+ LD++ + + N D+ F +I
Sbjct: 155 LCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDI-- 209
Query: 182 TAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRD-EKGRTLTEDQIADNII 240
K ++ +V +II +LN +D E G L ++ I II
Sbjct: 210 ----------KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 241 GVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL-----TWAQTK 295
L A +TT+ +L++ L +L NP +L QK E+ R L ++ Q K
Sbjct: 260 TFLIAGHETTSGLLSFALYFLVKNPHVL------QKAAEEA----ARVLVDPVPSYKQVK 309
Query: 296 NMRCTYRFILESMRM---ASIISFTFRE-AVCDVEYKGFLIPKGWKVMPLFRNIHHNSEF 351
++ + E++R+ A S +E V EY + KG ++M L +H +
Sbjct: 310 QLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYP---LEKGDELMVLIPQLHRDKTI 366
Query: 352 FSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWE 406
+ + ++ P RF+ A + F PFG G AC G + A E +++ ++ F +E
Sbjct: 367 WGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 76 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 133
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 134 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 190
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 191 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 238
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 239 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 292
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM----ASIISFTFREAVCDVEY 327
E+ R L ++ Q K ++ + E++R+ + + + V EY
Sbjct: 293 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEY 348
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 349 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 405
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 406 QQFALHEATLVLGMMLKHFDFE 427
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 26/171 (15%)
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL 289
+T +Q+ + + A ++TT S++ L D P+L ++ + ++ + + R L
Sbjct: 234 VTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPDLMPAAVDELLRVL 293
Query: 290 TWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNS 349
+ A S R A D+E G +P V+ L +H+
Sbjct: 294 SVAD---------------------SIPLRVAAEDIELSGRTVPADDGVIALLAGANHDP 332
Query: 350 EFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV 400
E F +P++VD R N V FG GVH C G LA+LE+ + + L+
Sbjct: 333 EQFDDPERVDFHRTD-----NHHVAFGYGVHQCVGQHLARLELEVALETLL 378
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 138/337 (40%), Gaps = 59/337 (17%)
Query: 82 ALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQ----VINTFKEM 137
LF + HAR+RKLV S + I L +I+ L++ + GQ V+ + E
Sbjct: 94 GLFGLPPEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARS-GQEEFDVVRDYAEG 152
Query: 138 KKFSFDVGILSIFGNLDDSYRE------KLKQNYLI--VDKGYNSFPSNIP-GTAYHKAL 188
+L + D+ +R + L+ VD+ + +++ G A +
Sbjct: 153 IPMRAISALLKVPAECDEKFRRFGSATARALGVGLVPRVDEETKTLVASVTEGLALLHGV 212
Query: 189 LARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAA-Q 247
L +R + + ++++ LL + + R T++ +A ++G + AA
Sbjct: 213 LDERRRNPLENDVLT--------------MLLQAEADGSRLSTKELVA--LVGAIIAAGT 256
Query: 248 DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILES 307
DTT ++ + + L +P+ LE VKAE ++ + + E
Sbjct: 257 DTTIYLIAFAVLNLLRSPEALELVKAEPGLMRNALD----------------------EV 294
Query: 308 MRMASIISF-TFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA 366
+R +I+ T R A D+EY G I KG V L + + FS P D R A
Sbjct: 295 LRFENILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTSA 354
Query: 367 PRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
+ +G G H CPG LA+LE I + + F
Sbjct: 355 S-----LAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 161/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 74 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 131
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 132 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 188
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 189 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 236
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 237 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 290
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 291 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEY 346
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 347 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 403
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 404 QQFALHEATLVLGMMLKHFDFE 425
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 138/337 (40%), Gaps = 59/337 (17%)
Query: 82 ALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQ----VINTFKEM 137
LF + HAR+RKLV S + I L +I+ L++ + GQ V+ + E
Sbjct: 94 GLFGLPPEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARS-GQEEFDVVRDYAEG 152
Query: 138 KKFSFDVGILSIFGNLDDSYRE------KLKQNYLI--VDKGYNSFPSNIP-GTAYHKAL 188
+L + D+ +R + L+ VD+ + +++ G A +
Sbjct: 153 IPMRAISALLKVPAECDEKFRRFGSATARALGVGLVPRVDEETKTLVASVTEGLALLHGV 212
Query: 189 LARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAA-Q 247
L +R + + ++++ LL + + R T++ +A ++G + AA
Sbjct: 213 LDERRRNPLENDVLT--------------MLLQAEADGSRLSTKELVA--LVGAIIAAGT 256
Query: 248 DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILES 307
DTT ++ + + L +P+ LE VKAE ++ + + E
Sbjct: 257 DTTIYLIAFAVLNLLRSPEALELVKAEPGLMRNALD----------------------EV 294
Query: 308 MRMASIISF-TFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA 366
+R +I+ T R A D+EY G I KG V L + + FS P D R A
Sbjct: 295 LRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTSA 354
Query: 367 PRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
+ +G G H CPG LA+LE I + + F
Sbjct: 355 S-----LAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 161/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F P+G G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPYGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 149/358 (41%), Gaps = 53/358 (14%)
Query: 72 KSKEKIIGPSALFFHQA--DYHARLR----KLVQ--SSLSPERIKKLIPDIEAIAISALE 123
K I+ PS F QA YHA + +LVQ L+ + ++ D+ + + +
Sbjct: 97 KKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIG 154
Query: 124 SCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQN--YLIVDKGYNSFPSNIPG 181
C N+F + F I S+ LD++ + + N D+ F +I
Sbjct: 155 LCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDI-- 209
Query: 182 TAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRD-EKGRTLTEDQIADNII 240
K ++ +V +II +LN +D E G L ++ I II
Sbjct: 210 ----------KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 241 GVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL-----TWAQTK 295
L A ++T+ +L++ L +L NP +L QK E+ R L ++ Q K
Sbjct: 260 TFLIAGHESTSGLLSFALYFLVKNPHVL------QKAAEEA----ARVLVDPVPSYKQVK 309
Query: 296 NMRCTYRFILESMRM---ASIISFTFRE-AVCDVEYKGFLIPKGWKVMPLFRNIHHNSEF 351
++ + E++R+ A S +E V EY + KG ++M L +H +
Sbjct: 310 QLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYP---LEKGDELMVLIPQLHRDKTI 366
Query: 352 FSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWE 406
+ + ++ P RF+ A + F PFG G AC G + A E +++ ++ F +E
Sbjct: 367 WGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 149/358 (41%), Gaps = 53/358 (14%)
Query: 72 KSKEKIIGPSALFFHQA--DYHARLR----KLVQ--SSLSPERIKKLIPDIEAIAISALE 123
K I+ PS F QA YHA + +LVQ L+ + ++ D+ + + +
Sbjct: 97 KKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIG 154
Query: 124 SCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQN--YLIVDKGYNSFPSNIPG 181
C N+F + F I S+ LD++ + + N D+ F +I
Sbjct: 155 LCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDI-- 209
Query: 182 TAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRD-EKGRTLTEDQIADNII 240
K ++ +V +II +LN +D E G L ++ I II
Sbjct: 210 ----------KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 241 GVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL-----TWAQTK 295
L A ++T+ +L++ L +L NP +L QK E+ R L ++ Q K
Sbjct: 260 TFLIAGHESTSGLLSFALYFLVKNPHVL------QKAAEEA----ARVLVDPVPSYKQVK 309
Query: 296 NMRCTYRFILESMRM---ASIISFTFRE-AVCDVEYKGFLIPKGWKVMPLFRNIHHNSEF 351
++ + E++R+ A S +E V EY + KG ++M L +H +
Sbjct: 310 QLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYP---LEKGDELMVLIPQLHRDKTI 366
Query: 352 FSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWE 406
+ + ++ P RF+ A + F PFG G AC G + A E +++ ++ F +E
Sbjct: 367 WGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 161/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 79 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 136
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 137 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 193
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 194 LQRTNPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 241
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+L+ +D E G L ++ I I+ L A +TT+ +L++ L +L NP +L QK
Sbjct: 242 HMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVL------QK 295
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 296 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 351
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 352 P---LEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 408
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 409 QQFALHEATLVLGMMLKHFDFE 430
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 149/358 (41%), Gaps = 53/358 (14%)
Query: 72 KSKEKIIGPSALFFHQA--DYHARLR----KLVQ--SSLSPERIKKLIPDIEAIAISALE 123
K I+ PS F QA YHA + +LVQ L+ + ++ D+ + + +
Sbjct: 98 KKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIG 155
Query: 124 SCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQN--YLIVDKGYNSFPSNIPG 181
C N+F + F I S+ LD++ + + N D+ F +I
Sbjct: 156 LCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDI-- 210
Query: 182 TAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRD-EKGRTLTEDQIADNII 240
K ++ +V +II +LN +D E G L ++ I II
Sbjct: 211 ----------KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQII 260
Query: 241 GVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL-----TWAQTK 295
L A ++T+ +L++ L +L NP +L QK E+ R L ++ Q K
Sbjct: 261 TFLIAGHESTSGLLSFALYFLVKNPHVL------QKAAEEA----ARVLVDPVPSYKQVK 310
Query: 296 NMRCTYRFILESMRM---ASIISFTFRE-AVCDVEYKGFLIPKGWKVMPLFRNIHHNSEF 351
++ + E++R+ A S +E V EY + KG ++M L +H +
Sbjct: 311 QLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYP---LEKGDELMVLIPQLHRDKTI 367
Query: 352 FSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWE 406
+ + ++ P RF+ A + F PFG G AC G + A E +++ ++ F +E
Sbjct: 368 WGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 219 LLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVV 278
L+NS E G+ +++D+I + +L +TT L+ + L + +A+ A+ ++
Sbjct: 208 LVNSEVE-GQRMSDDEIVFETLLILIGGDETTRHTLSGGTEQLLRHRDQWDALVADVDLL 266
Query: 279 HESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKV 338
+ I E +R S + R D + G + G K+
Sbjct: 267 PGA----------------------IEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKI 304
Query: 339 MPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHH 398
M +F + + + F DP F++ PN+ V FG G H C GN+LA+LE+ ++
Sbjct: 305 MLMFESANFDESVFG-----DPDNFRIDRNPNSHVAFGFGTHFCLGNQLARLELRLMTER 359
Query: 399 LV 400
++
Sbjct: 360 VL 361
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A + T+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 161/382 (42%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F P+G G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPWGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A + T+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A + T+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 148/358 (41%), Gaps = 53/358 (14%)
Query: 72 KSKEKIIGPSALFFHQA--DYHARLR----KLVQ--SSLSPERIKKLIPDIEAIAISALE 123
K I+ PS F QA YHA + +LVQ L+ + ++ D+ + + +
Sbjct: 97 KKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIG 154
Query: 124 SCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQN--YLIVDKGYNSFPSNIPG 181
C N+F + F I S+ LD++ + + N D+ F +I
Sbjct: 155 LCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDI-- 209
Query: 182 TAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRD-EKGRTLTEDQIADNII 240
K ++ +V +II +LN +D E G L ++ I II
Sbjct: 210 ----------KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 241 GVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL-----TWAQTK 295
L A + T+ +L++ L +L NP +L QK E+ R L ++ Q K
Sbjct: 260 TFLIAGHEATSGLLSFALYFLVKNPHVL------QKAAEEA----ARVLVDPVPSYKQVK 309
Query: 296 NMRCTYRFILESMRM---ASIISFTFRE-AVCDVEYKGFLIPKGWKVMPLFRNIHHNSEF 351
++ + E++R+ A S +E V EY + KG ++M L +H +
Sbjct: 310 QLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYP---LEKGDELMVLIPQLHRDKTI 366
Query: 352 FSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWE 406
+ + ++ P RF+ A + F PFG G AC G + A E +++ ++ F +E
Sbjct: 367 WGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 173/458 (37%), Gaps = 78/458 (17%)
Query: 3 PGSMGWPFIGETLQIY-------SQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAA 55
PG GW L +Y SQ + ++YG I++ + V + PE
Sbjct: 16 PGDNGW------LNLYHFWREKGSQRIHFRHIENFQKYGPIYREKLGNLESVYIIHPEDV 69
Query: 56 KFVLATHAHFFK--PTYPKSKE---------KIIGPSALFFHQADYHARLRKLVQSS-LS 103
AH FK +YP+ + P + F ++ + R ++ + ++
Sbjct: 70 -------AHLFKFEGSYPERYDIPPWLAYHRYYQKPIGVLFKKSGTWKKDRVVLNTEVMA 122
Query: 104 PERIKKLIP-------DIEAIAISALESCAVGQVINTFKE-MKKFSFDVGILSIFGNLDD 155
PE IK IP D ++ ++ G+ + KE + F+F+ +FG
Sbjct: 123 PEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFGERLG 182
Query: 156 SYREKLK-QNYLIVDKGYNSFPSNIPGTAYHKALLARKRL----------------SQIV 198
E + + +D Y F +++P L R ++
Sbjct: 183 MLEETVNPEAQKFIDAVYKMFHTSVPLLNVPPELYRLFRTKTWRDHVAAWDTIFNKAEKY 242
Query: 199 SEIICXXXXXXXXXXXXXG---CLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLT 255
+EI G CLL S + L ED + NI +L +TT+ L
Sbjct: 243 TEIFYQDLRRKTEFRNYPGILYCLLKSE----KMLLED-VKANITEMLAGGVNTTSMTLQ 297
Query: 256 WILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRF---ILESMRMAS 312
W +L++ + L Q+++ E +R +K ++ I E++R+
Sbjct: 298 W---HLYEMARSLNV----QEMLREEVLNARRQAEGDISKMLQMVPLLKASIKETLRLHP 350
Query: 313 IISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTF 372
I R D+ + +LIP V + + FFS P K DP+R+ +
Sbjct: 351 ISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLIH 410
Query: 373 ---VPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEV 407
+ FG GV C G +A+LEM + + H++ F+ E+
Sbjct: 411 FRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEM 448
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 159/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 74 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 131
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 132 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 188
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 189 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 236
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A + T+ +L++ L +L NP +L QK
Sbjct: 237 HMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVL------QK 290
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM----ASIISFTFREAVCDVEY 327
E+ R L ++ Q K ++ + E++R+ + + + V EY
Sbjct: 291 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEY 346
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 347 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 403
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 404 QQFALHEATLVLGMMLKHFDFE 425
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 121/316 (38%), Gaps = 47/316 (14%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIF 150
H RLRKLV S + R+ +L P I IA L ++ +E F V ++
Sbjct: 95 HTRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPTDGPVDLMREYA-FQIPVQVICEL 153
Query: 151 GNLDDSYREKLKQ-NYLIVDKGYNSFPSNIPGT--AYHKALLARKRLSQIVSEIICXXXX 207
+ R+ + ++VD + G Y LL RKR
Sbjct: 154 LGVPAEDRDDFSAWSSVLVDDSPADDKNAAMGKLHGYLSDLLERKRTEP----------- 202
Query: 208 XXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKL 267
LL DE G L+++++ + +L A +TT +++ + L +P
Sbjct: 203 ----DDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQ 258
Query: 268 LEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFT-FREAVCDVE 326
+ + + ++ + + E +R S +S R DV
Sbjct: 259 RKLLAEDPSLISSA----------------------VEEFLRFDSPVSQAPIRFTAEDVT 296
Query: 327 YKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNE 386
Y G IP G VM + ++++ EP ++D +R + V FG G+H C G +
Sbjct: 297 YSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA-----SGGVFFGHGIHFCLGAQ 351
Query: 387 LAKLEMLILIHHLVTE 402
LA+LE + I L +
Sbjct: 352 LARLEGRVAIGRLFAD 367
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 132/336 (39%), Gaps = 41/336 (12%)
Query: 66 FKPTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISAL-ES 124
F T P+ + P A H R++ S + +RIK + P++E + L E
Sbjct: 78 FPATSPRFEAVRESPQAFIGLDPPEHGTRRRMTISEFTVKRIKGMRPEVEEVVHGFLDEM 137
Query: 125 CAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNSFPSNIPGTAY 184
A G T + +F+ V + I L Y + + ++ + T
Sbjct: 138 LAAGP---TADLVSQFALPVPSMVICRLLGVPYADH--------EFFQDASKRLVQSTDA 186
Query: 185 HKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLF 244
AL AR L+ + +I G L+ + G E+ I+ ++ +L
Sbjct: 187 QSALTARNDLAGYLDGLITQFQTEPGAGLV--GALVADQLANGEIDREELISTAML-LLI 243
Query: 245 AAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFI 304
A +TTAS+ + + L D+P+ A++A++ +V + R L A R
Sbjct: 244 AGHETTASMTSLSVITLLDHPEQYAALRADRSLVPGAVEELLRYLAIADIAGGRV----- 298
Query: 305 LESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFK 364
A D+E +G LI G V+ + + + + +P +D R
Sbjct: 299 ----------------ATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSA 342
Query: 365 VAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV 400
+ FG GVH C G LA+LE+ ++++ L+
Sbjct: 343 -----RHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 128/309 (41%), Gaps = 43/309 (13%)
Query: 113 DIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQN--YLIVDK 170
D+ + + + C IN+F + F I S+ LD+ + + N D+
Sbjct: 145 DMTRLTLDTIGLCGFNYRINSFYRDQPHPF---ITSMVRALDEVMNKLQRANPDDPAYDE 201
Query: 171 GYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRD-EKGRT 229
F +I K ++ +V +II +L+ +D E G
Sbjct: 202 NKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEP 249
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL 289
L ++ I II L A +TT+ +LT+ L +L NP +L QK E+ R L
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVL------QKAAEEA----ARVL 299
Query: 290 -----TWAQTKNMRCTYRFILESMRM---ASIISFTFREAVCDVEYKG-FLIPKGWKVMP 340
++ Q K ++ + E++R+ A S +E D G + + KG ++M
Sbjct: 300 VDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKE---DTMLGGEYPLEKGDELMV 356
Query: 341 LFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPGNELAKLEMLILIH 397
L +H + + + ++ P RF+ A + F PFG G AC G + A E +++
Sbjct: 357 LIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLG 416
Query: 398 HLVTEFRWE 406
++ F +E
Sbjct: 417 MMLKHFDFE 425
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 159/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A + T+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM----ASIISFTFREAVCDVEY 327
E+ R L ++ Q K ++ + E++R+ + + + V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 14/194 (7%)
Query: 219 LLNSRDEKGRTLTE---DQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAE- 274
LL+ EK +E + N + + FA +TT++ L + + P + E V E
Sbjct: 250 LLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREI 309
Query: 275 QKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCD-VEYKGFLIP 333
++V+ G R M T I E R + ++ V ++G++IP
Sbjct: 310 EQVI-----GPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIP 364
Query: 334 KGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA----PRPNTFVPFGLGVHACPGNELAK 389
K +V + H+ +F +P +P F A + F+PF LG C G +A+
Sbjct: 365 KDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIAR 424
Query: 390 LEMLILIHHLVTEF 403
E+ + ++ F
Sbjct: 425 AELFLFFTTILQNF 438
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F P G G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPHGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LQRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A +TT+ +L++ L +L NP +L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F P G G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPAGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 159/382 (41%), Gaps = 58/382 (15%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV A F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 73 QAPKFVRDFAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 130
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 131 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 187
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 188 LRRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A + T+ +L++ L +L NP L QK
Sbjct: 236 HMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHEL------QK 289
Query: 277 VVHESNNGGQRAL-----TWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEY 327
E+ R L ++ Q K ++ + E++R+ A S +E V EY
Sbjct: 290 AAEEA----ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPG 384
+ KG ++M L +H + + + ++ P RF+ A + F PFG G AC G
Sbjct: 346 P---LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 385 NELAKLEMLILIHHLVTEFRWE 406
+ A E +++ ++ F +E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 131/336 (38%), Gaps = 41/336 (12%)
Query: 66 FKPTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISAL-ES 124
F T P + P A H R++ S + +RIK + P++E + L E
Sbjct: 78 FPATSPAFEAVRESPQAFIGLDPPEHGTRRRMTISEFTVKRIKGMRPEVEEVVHGFLDEM 137
Query: 125 CAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNSFPSNIPGTAY 184
A G T + +F+ V + I L Y + + ++ + T
Sbjct: 138 LAAGP---TADLVSQFALPVPSMVICRLLGVPYADH--------EFFQDASKRLVQSTDA 186
Query: 185 HKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLF 244
AL AR L+ + +I G L+ + G E+ I+ ++ +L
Sbjct: 187 QSALTARNDLAGYLDGLITQFQTEPGAGLV--GALVADQLANGEIDREELISTAML-LLI 243
Query: 245 AAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFI 304
A +TTAS+ + + L D+P+ A++A++ +V + R L A R
Sbjct: 244 AGHETTASMTSLSVITLLDHPEQYAALRADRSLVPGAVEELLRYLAIADIAGGRV----- 298
Query: 305 LESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFK 364
A D+E +G LI G V+ + + + + +P +D R
Sbjct: 299 ----------------ATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSA 342
Query: 365 VAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV 400
+ FG GVH C G LA+LE+ ++++ L+
Sbjct: 343 -----RHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 130/336 (38%), Gaps = 41/336 (12%)
Query: 66 FKPTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISAL-ES 124
F T P + P A H R++ S + +RIK + P++E + L E
Sbjct: 78 FPATSPAFEAVRESPQAFIGLDPPEHGTRRRMTISEFTVKRIKGMRPEVEEVVHGFLDEM 137
Query: 125 CAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNSFPSNIPGTAY 184
A G T + +F+ V + I L Y + + D S T
Sbjct: 138 LAAGP---TADLVSQFALPVPSMVICRLLGVPYAD----HEFFQDASKRLVQS----TDA 186
Query: 185 HKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLF 244
AL AR L+ + +I G L+ + G E+ I+ ++ +L
Sbjct: 187 QSALTARNDLAGYLDGLITQFQTEPGAGLV--GALVADQLANGEIDREELISTAML-LLI 243
Query: 245 AAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFI 304
A +TTAS+ + + L D+P+ A++A++ +V + R L A R
Sbjct: 244 AGHETTASMTSLSVITLLDHPEQYAALRADRSLVPGAVEELLRYLAIADIAGGRV----- 298
Query: 305 LESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFK 364
A D+E +G LI G V+ + + + + +P +D R
Sbjct: 299 ----------------ATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSA 342
Query: 365 VAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV 400
+ FG GVH C G LA+LE+ ++++ L+
Sbjct: 343 -----RHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 120/316 (37%), Gaps = 47/316 (14%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIF 150
H RLRKLV S + R+ +L P I IA L ++ +E F V ++
Sbjct: 95 HTRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPTDGPVDLMREYA-FQIPVQVICEL 153
Query: 151 GNLDDSYREKLKQ-NYLIVDKGYNSFPSNIPGT--AYHKALLARKRLSQIVSEIICXXXX 207
L R+ + ++VD + G Y LL RKR
Sbjct: 154 LGLPAEDRDDFSAWSSVLVDDSPADDKNAAMGKLHGYLSDLLERKRTEP----------- 202
Query: 208 XXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKL 267
LL D G L+++++ + +L A +TT +++ + L +P
Sbjct: 203 ----DDALLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQ 258
Query: 268 LEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFT-FREAVCDVE 326
+ + + ++ + + E +R S +S R DV
Sbjct: 259 RKLLAEDPSLISSA----------------------VEEFLRFDSPVSQAPIRFTAEDVT 296
Query: 327 YKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNE 386
Y G IP G VM + ++++ EP ++D +R + V FG G+H C G +
Sbjct: 297 YSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA-----SGGVFFGHGIHFCLGAQ 351
Query: 387 LAKLEMLILIHHLVTE 402
LA+LE + I L +
Sbjct: 352 LARLEGRVAIGRLFAD 367
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 156/377 (41%), Gaps = 48/377 (12%)
Query: 53 EAAKFV--LATHAHFFKPTYPKSKEK---IIGPSALFFHQA--DYHARLR----KLVQ-- 99
+A KFV LA F T+ K+ +K I+ PS F QA YHA + +LVQ
Sbjct: 74 QAPKFVRDLAGDGLFTSWTHEKNWKKAHNILLPS--FSQQAMKGYHAMMVDIAVQLVQKW 131
Query: 100 SSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE 159
L+ + ++ D+ + + + C N+F + F I S+ LD++ +
Sbjct: 132 ERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPF---ITSMVRALDEAMNK 188
Query: 160 KLKQN--YLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXG 217
+ N D+ F +I K ++ +V +II
Sbjct: 189 LRRANPDDPAYDENKRQFQEDI------------KVMNDLVDKIIADRKASGEQSDDLLT 236
Query: 218 CLLNSRD-EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQK 276
+LN +D E G L ++ I II L A + T+ +L++ L +L NP L+ E
Sbjct: 237 HMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAA 296
Query: 277 VVHESNNGGQRALTWAQTKNMRCTYRFILESMRM---ASIISFTFRE-AVCDVEYKGFLI 332
V + Q K ++ + E++R+ A S +E V EY +
Sbjct: 297 RVLVDPVPSHK-----QVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYP---L 348
Query: 333 PKGWKVMPLFRNIHHNSEFFSEP-QKVDPSRFK--VAPRPNTFVPFGLGVHACPGNELAK 389
KG ++M L +H + + + ++ P RF+ A + F PFG G AC G + A
Sbjct: 349 EKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFAL 408
Query: 390 LEMLILIHHLVTEFRWE 406
E +++ ++ F +E
Sbjct: 409 HEATLVLGMMLKHFDFE 425
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 126/322 (39%), Gaps = 41/322 (12%)
Query: 80 PSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISAL-ESCAVGQVINTFKEMK 138
P A H R++ S + +RIK + P++E + L E A G T +
Sbjct: 92 PQAFIGLDPPEHGTRRRMTISEFTVKRIKGMRPEVEEVVHGFLDEMLAAGP---TADLVS 148
Query: 139 KFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIV 198
+F+ V + I L Y + + D S T AL AR L+ +
Sbjct: 149 QFALPVPSMVICRLLGVPYAD----HEFFQDASKRLVQS----TDAQSALTARNDLAGYL 200
Query: 199 SEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWIL 258
+I G L+ + G E+ I+ ++ +L A +TTAS+ + +
Sbjct: 201 DGLITQFQTEPGAGLV--GALVADQLANGEIDREELISTAML-LLIAGHETTASMTSLSV 257
Query: 259 KYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTF 318
L D+P+ A++A++ +V + R L A R
Sbjct: 258 ITLLDHPEQYAALRADRSLVPGAVEELLRYLAIADIAGGRV------------------- 298
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
A D+E +G LI G V+ + + + + +P +D R + FG G
Sbjct: 299 --ATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSA-----RHHLAFGFG 351
Query: 379 VHACPGNELAKLEMLILIHHLV 400
VH C G LA+LE+ ++++ L+
Sbjct: 352 VHQCLGQNLARLELEVILNALM 373
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/320 (18%), Positives = 131/320 (40%), Gaps = 46/320 (14%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIAISALESCA---VGQVINTFKEMKKFSFDVGIL 147
H +LR+LV + S R+ + P +EA+ ++ A G+ ++ +E+ + + ++
Sbjct: 95 HRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELA-YPLPIAVI 153
Query: 148 SIFGNLDDSYREKLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXX 207
+ R+ + +VD +++ A RL +++ ++I
Sbjct: 154 GHLMGVPQDRRDGFRA---LVDGVFDTTLDQAEAQAN------TARLYEVLDQLIAAKRA 204
Query: 208 XXXXXXXXXGCLLNSRDEKGR--TLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNP 265
L+ +RD++G L+ +++ D ++ ++ A +TT +V+ + L P
Sbjct: 205 TPGDDMT--SLLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRP 262
Query: 266 KLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMA-SIISFTFREAVCD 324
L V+ + +TWA + E++R ++ R AV D
Sbjct: 263 DQLALVRKGE-------------VTWAD---------VVEETLRHEPAVKHLPLRYAVTD 300
Query: 325 VEY-KGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACP 383
+ G I +G ++ + + + ++ + D +R + FG GVH C
Sbjct: 301 IALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRTV-----KEHLAFGHGVHFCL 355
Query: 384 GNELAKLEMLILIHHLVTEF 403
G LA++E+ + + L F
Sbjct: 356 GAPLARMEVTLALESLFGRF 375
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 178/459 (38%), Gaps = 66/459 (14%)
Query: 2 PPGSMGW-PFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASP-------- 52
PP G P++G LQ + +P F Q+++G +F ++G + +P
Sbjct: 15 PPLENGLIPYLGCALQ-FGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLC 73
Query: 53 -----EAAKFVLATHAHFF--KPTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSLSPE 105
+ KF AT A F + P + F HA L L +S + E
Sbjct: 74 HGKYFDWKKFHFATSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHA-LNSLTESMM--E 130
Query: 106 RIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLK--- 162
+++++ +S+ A + + F+ G L+IFG D + R+ K
Sbjct: 131 NLQRIMRP----PVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGR-DLTRRDTQKAHI 185
Query: 163 ----QNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGC 218
N+ DK + + + +P + A AR++L++ +
Sbjct: 186 LNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELISLRMF 245
Query: 219 LLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVV 278
L ++ T + + A + VL+A+Q T W L + NP+ ++A E K
Sbjct: 246 L----NDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRT 301
Query: 279 HESNNGGQRA--------LTWAQTKNMRCTYRFILESMRMASIISFTFREAVCD----VE 326
E N GQ+ L+ A+ ++ I ES+R++S S R A D +E
Sbjct: 302 LE--NAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLE 358
Query: 327 YKGFLIPKGWKVMPLFRNIHH-NSEFFSEPQKVDPSRF--KVAPRPNTF----------- 372
+ I K ++ L+ + H + E + +P R+ + TF
Sbjct: 359 DGSYNIRKD-DIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYY 417
Query: 373 VPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQ 411
+PFG G CPG A E+ + +++ F E++ Q
Sbjct: 418 MPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQ 456
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 28/191 (14%)
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL 289
LTED++A +G+LFA D+ AS++ DN +L A +Q RA
Sbjct: 226 LTEDRVAHLAMGLLFAGLDSVASIM--------DNGVVLLAAHPDQ-----------RAA 266
Query: 290 TWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNS 349
A M +L + R + R A D+E+ G I G V+ + +
Sbjct: 267 ALADPDVMARAVEEVLRTARAGGSV-LPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDE 325
Query: 350 EFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT---EFRWE 406
F+ P++ D +R PN + FG G+ C G LA+LE+ + L T E R E
Sbjct: 326 RAFTGPEEFDAART-----PNPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPE 380
Query: 407 VVGSQNGIQYG 417
+ Q ++ G
Sbjct: 381 LPVEQLRLKEG 391
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 118/316 (37%), Gaps = 44/316 (13%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIF 150
H RLRKLV + R++ + P +E I L+ V++ + ++
Sbjct: 98 HTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAH-PLPIKVICEL 156
Query: 151 GNLDDSYREKLKQ---NYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXX 207
+D+ YR + + L++D P A + AR+ ++ I+ +
Sbjct: 157 LGVDEKYRGEFGRWSSEILVMD----------PERAEQRGQAAREVVNFILDLV---ERR 203
Query: 208 XXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKL 267
L+ +D+ L+ D++ + +L A +T+ S++ L +P
Sbjct: 204 RTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYLLLTHPDQ 263
Query: 268 LEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEY 327
L V+ + + + + E +R + T R A +VE
Sbjct: 264 LALVRRDPSALPNA----------------------VEEILRYIAPPETTTRFAAEEVEI 301
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNEL 387
G IP+ V+ + + + Q DP RF V + FG G+H C G L
Sbjct: 302 GGVAIPQYSTVL-----VANGAANRDPKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPL 356
Query: 388 AKLEMLILIHHLVTEF 403
AKLE + + L F
Sbjct: 357 AKLEGEVALRALFGRF 372
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 131/348 (37%), Gaps = 65/348 (18%)
Query: 68 PTYPK--SKEKI-IGPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALES 124
P +P+ ++E + + + L A H RLRK++ +P I +L ++ + A +
Sbjct: 81 PVWPQDMTREAVDLQRAVLLNMDAPQHTRLRKIISRGFTPRAIGRLEDELRSRA-QKIAQ 139
Query: 125 CAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKL-----------KQNYLIVDKGYN 173
A Q F E + ++ + R+KL Y VD +
Sbjct: 140 TAAAQGAGDFVEQVSCELPLQAIAELLGVPQDDRDKLFRWSNEMTAGEDPEYADVDPAMS 199
Query: 174 SFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTED 233
SF + +A +R +I+ L D G L++D
Sbjct: 200 SFE-----LISYAMKMAEERAVNPTEDIVTK---------------LIEADIDGEKLSDD 239
Query: 234 QIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQ 293
+ ++ + A +TT + +T + NP E K E R T A
Sbjct: 240 EFGFFVVMLAVAGNETTRNSITHGMIAFAQNPDQWELYKKE------------RPETAAD 287
Query: 294 TKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFS 353
E +R A+ +S R A+ DVE G I KG +V+ +R+ + + E F
Sbjct: 288 ------------EIVRWATPVSAFQRTALEDVELGGVQIKKGQRVVMSYRSANFDEEVFE 335
Query: 354 EPQKVDPSRFKVAPRPNTFVPF-GLGVHACPGNELAKLEMLILIHHLV 400
DP F + PN V F G G H C G LA++ + ++ + +
Sbjct: 336 -----DPHTFNILRSPNPHVGFGGTGAHYCIGANLARMTINLIFNAIA 378
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 32/180 (17%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGG 285
K R LT D+ I+ ++ +TT +++ +++ + +NP +++
Sbjct: 169 KNRKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDA-------------- 214
Query: 286 QRALTWAQTKNMRCTYRFILESMRMASIISFT-FREAVCDVEYKGFLIPKGWKVMPLFRN 344
++ F+ E++R S I F R A D I KG +V+ +
Sbjct: 215 -----------LKNRSGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGS 263
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFR 404
+ + FF EP FK+ R + FG+G+H C G LA+LE I ++ ++ F+
Sbjct: 264 ANRDETFFDEPD-----LFKIGRRE-MHLAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 27/174 (15%)
Query: 227 GRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQ 286
G +++ A I A DTT++ L +P L VKA++ ++
Sbjct: 271 GEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRNLLPG------ 324
Query: 287 RALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIH 346
+ E++R + + R A D E G I G +M + +
Sbjct: 325 ----------------IVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAAN 368
Query: 347 HNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV 400
H+ F EP+K DP+R N + FG G H C G LA+LEM +L+ L+
Sbjct: 369 HDPAQFPEPRKFDPTRPA-----NRHLAFGAGSHQCLGLHLARLEMRVLLDVLL 417
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 303 FILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSR 362
F+ E R A D E++G P+G +V+ +H++ +++PQ+ P R
Sbjct: 277 FVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPER 336
Query: 363 FKVAPRPN-TFVPFGLG----VHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNGIQYG 417
F+ + F+P G G H CPG + M + H LV R++V I +
Sbjct: 337 FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFA 396
Query: 418 PFP-VPEKGLPAR 429
P +P+ G R
Sbjct: 397 RLPALPKSGFVMR 409
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 303 FILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSR 362
F+ E R A D E++G P+G +V+ +H++ +++PQ+ P R
Sbjct: 269 FVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPER 328
Query: 363 FKVAPRPN-TFVPFGLG----VHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNGIQYG 417
F+ + F+P G G H CPG + M + H LV R++V I +
Sbjct: 329 FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFA 388
Query: 418 PFP-VPEKGLPAR 429
P +P+ G R
Sbjct: 389 RLPALPKSGFVMR 401
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 178/452 (39%), Gaps = 52/452 (11%)
Query: 2 PPGSMGW-PFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
PP G P++G LQ + +P F Q+++G +F ++G + +P + VL
Sbjct: 15 PPLENGLIPYLGCALQ-FGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLC 73
Query: 61 THAHF-FKPTYPKSKEKIIGPSALFFHQADYHARLR----KLVQSSLSPERIKKLIPDIE 115
+F +K + K G ++ + + K +Q + ++ +++
Sbjct: 74 HGKYFDWKKFHFALSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQ 133
Query: 116 AIA---ISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLK-------QNY 165
I +S+ A + + F+ G L+IFG D + R+ K N+
Sbjct: 134 RIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGR-DLTRRDTQKAHILNNLDNF 192
Query: 166 LIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDE 225
DK + + + +P + A AR++L++ + L ++
Sbjct: 193 KQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELISLRMFL----ND 248
Query: 226 KGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGG 285
T + + A + VL+A+Q T W L + NP+ ++A E K E N G
Sbjct: 249 TLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLE--NAG 306
Query: 286 QRA--------LTWAQTKNMRCTYRFILESMRMASIISFTFREAVCD----VEYKGFLIP 333
Q+ L+ A+ ++ I ES+R++S S R A D +E + I
Sbjct: 307 QKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGSYNIR 365
Query: 334 KGWKVMPLFRNIHH-NSEFFSEPQKVDPSRF--KVAPRPNTF-----------VPFGLGV 379
K ++ L+ + H + E + +P R+ + TF +PFG G
Sbjct: 366 KD-DIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGA 424
Query: 380 HACPGNELAKLEMLILIHHLVTEFRWEVVGSQ 411
CPG A E+ + +++ F E++ Q
Sbjct: 425 TICPGRLFAIHEIKQFLILMLSYFELELIEGQ 456
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 303 FILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSR 362
F+ E R A D E++G P+G +V+ +H++ +++PQ+ P R
Sbjct: 269 FVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPER 328
Query: 363 FKVAPRPN-TFVPFGLG----VHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNGIQYG 417
F+ + F+P G G H CPG + M + H LV R++V I +
Sbjct: 329 FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFA 388
Query: 418 PFP-VPEKGLPAR 429
P +P+ G R
Sbjct: 389 RLPALPKSGFVMR 401
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 303 FILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSR 362
F+ E R A D E++G P+G +V+ +H++ +++PQ+ P R
Sbjct: 277 FVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPER 336
Query: 363 FKVAPRPN-TFVPFGLG----VHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNGIQYG 417
F+ + F+P G G H CPG + M + H LV R++V I +
Sbjct: 337 FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFA 396
Query: 418 PFP-VPEKGLPAR 429
P +P+ G R
Sbjct: 397 RLPALPKSGFVMR 409
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 303 FILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSR 362
F+ E R A D E++G P+G +V+ +H++ +++PQ+ P R
Sbjct: 269 FVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPER 328
Query: 363 FKVAPRPN-TFVPFGLG----VHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNGIQYG 417
F+ + F+P G G H CPG + M + H LV R++V I +
Sbjct: 329 FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFA 388
Query: 418 PFP-VPEKGLPAR 429
P +P+ G R
Sbjct: 389 RLPALPKSGFVMR 401
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 118/316 (37%), Gaps = 44/316 (13%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIF 150
H RLRKLV + R++ + P +E I L+ V++ + ++
Sbjct: 98 HTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAH-PLPIKVICEL 156
Query: 151 GNLDDSYREKLKQ---NYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXX 207
+D+ YR + + L++D P A + AR+ ++ I+ +
Sbjct: 157 LGVDEKYRGEFGRWSSEILVMD----------PERAEQRGQAAREVVNFILDLV---ERR 203
Query: 208 XXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKL 267
L+ +D+ L+ D++ + +L A +++ S++ L +P
Sbjct: 204 RTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQ 263
Query: 268 LEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEY 327
L V+ + + + + E +R + T R A +VE
Sbjct: 264 LALVRRDPSALPNA----------------------VEEILRYIAPPETTTRFAAEEVEI 301
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNEL 387
G IP+ V+ + + + Q DP RF V + FG G+H C G L
Sbjct: 302 GGVAIPQYSTVL-----VANGAANRDPKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPL 356
Query: 388 AKLEMLILIHHLVTEF 403
AKLE + + L F
Sbjct: 357 AKLEGEVALRALFGRF 372
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 118/316 (37%), Gaps = 44/316 (13%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIF 150
H RLRKLV + R++ + P +E I L+ V++ + ++
Sbjct: 97 HTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAH-PLPIKVICEL 155
Query: 151 GNLDDSYREKLKQ---NYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXX 207
+D+ YR + + L++D P A + AR+ ++ I+ +
Sbjct: 156 LGVDEKYRGEFGRWSSEILVMD----------PERAEQRGQAAREVVNFILDLV---ERR 202
Query: 208 XXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKL 267
L+ +D+ L+ D++ + +L A +++ S++ L +P
Sbjct: 203 RTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQ 262
Query: 268 LEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEY 327
L V+ + + + + E +R + T R A +VE
Sbjct: 263 LALVRRDPSALPNA----------------------VEEILRYIAPPETTTRFAAEEVEI 300
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNEL 387
G IP+ V+ + + + Q DP RF V + FG G+H C G L
Sbjct: 301 GGVAIPQYSTVL-----VANGAANRDPKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPL 355
Query: 388 AKLEMLILIHHLVTEF 403
AKLE + + L F
Sbjct: 356 AKLEGEVALRALFGRF 371
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 117/316 (37%), Gaps = 44/316 (13%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIF 150
H RLRKLV + R++ + P +E I L+ V++ + ++
Sbjct: 98 HTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAH-PLPIKVICEL 156
Query: 151 GNLDDSYREKLKQ---NYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXX 207
+D+ YR + + L++D P A + AR+ ++ I+ +
Sbjct: 157 LGVDEKYRGEFGRWSSEILVMD----------PERAEQRGQAAREVVNFILDLV---ERR 203
Query: 208 XXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKL 267
L+ +D+ L+ D++ + +L A + + S++ L +P
Sbjct: 204 RTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQ 263
Query: 268 LEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEY 327
L V+ + + + + E +R + T R A +VE
Sbjct: 264 LALVRRDPSALPNA----------------------VEEILRYIAPPETTTRFAAEEVEI 301
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNEL 387
G IP+ V+ + + + Q DP RF V + FG G+H C G L
Sbjct: 302 GGVAIPQYSTVL-----VANGAANRDPKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPL 356
Query: 388 AKLEMLILIHHLVTEF 403
AKLE + + L F
Sbjct: 357 AKLEGEVALRALFGRF 372
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 117/316 (37%), Gaps = 44/316 (13%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIF 150
H RLRKLV + R++ + P +E I L+ V++ + ++
Sbjct: 97 HTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAH-PLPIKVICEL 155
Query: 151 GNLDDSYREKLKQ---NYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXX 207
+D+ YR + + L++D P A + AR+ ++ I+ +
Sbjct: 156 LGVDEKYRGEFGRWSSEILVMD----------PERAEQRGQAAREVVNFILDLV---ERR 202
Query: 208 XXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKL 267
L+ +D+ L+ D++ + +L A + + S++ L +P
Sbjct: 203 RTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQ 262
Query: 268 LEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEY 327
L V+ + + + + E +R + T R A +VE
Sbjct: 263 LALVRRDPSALPNA----------------------VEEILRYIAPPETTTRFAAEEVEI 300
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNEL 387
G IP+ V+ + + + Q DP RF V + FG G+H C G L
Sbjct: 301 GGVAIPQYSTVL-----VANGAANRDPKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPL 355
Query: 388 AKLEMLILIHHLVTEF 403
AKLE + + L F
Sbjct: 356 AKLEGEVALRALFGRF 371
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 303 FILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSR 362
F+ E R A D E++G P+G +V+ +H++ +++PQ+ P R
Sbjct: 277 FVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPER 336
Query: 363 FKVAPRPN-TFVPFGLG----VHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNGIQYG 417
F+ + F+P G G H CPG + M + H LV R++V I +
Sbjct: 337 FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFA 396
Query: 418 PFP-VPEKGLPAR 429
P +P+ G R
Sbjct: 397 RLPALPKSGFVMR 409
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A+ DVE KG I G V + + + E F +P ++D R PN V FG G
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-----SPNPHVSFGFG 349
Query: 379 VHACPGNELAKLEMLILIHHLV 400
H CPG LA+LE +L+ ++
Sbjct: 350 PHYCPGGMLARLESELLVDAVL 371
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A+ DVE KG I G V + + + E F +P ++D R PN V FG G
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-----SPNPHVSFGFG 349
Query: 379 VHACPGNELAKLEMLILIHHLV 400
H CPG LA+LE +L+ ++
Sbjct: 350 PHYCPGGMLARLESELLVDAVL 371
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A+ DVE KG I G V + + + E F +P ++D R PN V FG G
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-----SPNPHVSFGFG 349
Query: 379 VHACPGNELAKLEMLILIHHLV 400
H CPG LA+LE +L+ ++
Sbjct: 350 PHYCPGGMLARLESELLVDAVL 371
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A+ DVE KG I G V + + + E F +P ++D R PN V FG G
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-----SPNPHVSFGFG 349
Query: 379 VHACPGNELAKLEMLILI 396
H CPG LA+LE +L+
Sbjct: 350 PHYCPGGMLARLESELLV 367
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A+ DVE KG I G V + + + E F +P ++D R PN V FG G
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-----SPNPHVSFGFG 349
Query: 379 VHACPGNELAKLEMLILI 396
H CPG LA+LE +L+
Sbjct: 350 PHYCPGGMLARLESELLV 367
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A+ DVE KG I G V + + + E F +P ++D R PN V FG G
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-----SPNPHVSFGFG 349
Query: 379 VHACPGNELAKLEMLILI 396
H CPG LA+LE +L+
Sbjct: 350 PHYCPGGMLARLESELLV 367
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A+ DVE KG I G V + + + E F +P ++D R PN V FG G
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-----SPNPHVSFGFG 349
Query: 379 VHACPGNELAKLEMLILI 396
H CPG LA+LE +L+
Sbjct: 350 PHYCPGGMLARLESELLV 367
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 118/316 (37%), Gaps = 44/316 (13%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIF 150
H RLRKLV + R++ + P +E I L+ V++ + ++
Sbjct: 97 HTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAH-PLPIKVICEL 155
Query: 151 GNLDDSYRE---KLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXX 207
+D++ R + L++D P A + AR+ ++ I+ +
Sbjct: 156 LGVDEAARGAFGRWSSEILVMD----------PERAEQRGQAAREVVNFILDLV---ERR 202
Query: 208 XXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKL 267
L++ +D+ L+ D++ + +L A + + S++ L +P
Sbjct: 203 RTEPGDDLLSALISVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQ 262
Query: 268 LEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEY 327
L V+A+ + + + E +R + T R A +VE
Sbjct: 263 LALVRADPSALPNA----------------------VEEILRYIAPPETTTRFAAEEVEI 300
Query: 328 KGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNEL 387
G IP+ V+ + + + Q DP RF V + FG G+H C G L
Sbjct: 301 GGVAIPQYSTVL-----VANGAANRDPSQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPL 355
Query: 388 AKLEMLILIHHLVTEF 403
AKLE + + L F
Sbjct: 356 AKLEGEVALRALFGRF 371
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 30/178 (16%)
Query: 226 KGRT---LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESN 282
KGR LTE++ A I + A +TT ++++ + L +P+ L ++ ++ +
Sbjct: 212 KGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTA- 270
Query: 283 NGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLF 342
+ E +R S T R A D++ G I +G +V L
Sbjct: 271 ---------------------VEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLL 309
Query: 343 RNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV 400
+ + F+ P D +R PN + FG G H C G+ LA+LE I I+ L+
Sbjct: 310 GAANRDPSIFTNPDVFDITR-----SPNPHLSFGHGHHVCLGSSLARLEAQIAINTLL 362
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 11/185 (5%)
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL 289
+ D+I I ++FA T++ +W L L + AV E ++ G R++
Sbjct: 241 FSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELY----GDGRSV 296
Query: 290 TWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNS 349
++ + + + E++R+ + R A + E +G I +G V +
Sbjct: 297 SFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIP 356
Query: 350 EFFSEPQKVDPSRFKVAPRPN------TFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
E F +P P+R++ PR T++PFG G H C G A +++ + L+ E+
Sbjct: 357 EDFPDPHDFVPARYE-QPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREY 415
Query: 404 RWEVV 408
+E+
Sbjct: 416 EFEMA 420
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/428 (19%), Positives = 158/428 (36%), Gaps = 74/428 (17%)
Query: 23 NVFFATKQKRYGEIFKTHIL-------GCPCVMLASPEAAKFVLATHAHFFKPTY----P 71
+V T RYGE+ +T + G ++ E + VL P+ P
Sbjct: 33 DVHGLTLAGRYGELQETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDGRFVRGPSMTRDEP 92
Query: 72 KSKEKIIGPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALES-CAVGQ- 129
+++ +++ L H+RLR+LV + + R + L P IA ++ A GQ
Sbjct: 93 RTRPEMVK-GGLLSMDPPEHSRLRRLVVKAFTARRAESLRPRAREIAHELVDQMAATGQP 151
Query: 130 --VINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNSFPSNIPGTAY-HK 186
++ F +L + D + + +L + AY +
Sbjct: 152 ADLVAMFARQLPVRVICELLGVPSADHDRF-TRWSGAFLSTAEVTAEEMQEAAEQAYAYM 210
Query: 187 ALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAA 246
L +R + +++ L+ +RD++ +L+E ++ D IG+L A
Sbjct: 211 GDLIDRRRKEPTDDLVS--------------ALVQARDQQD-SLSEQELLDLAIGLLVAG 255
Query: 247 QDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILE 306
++T + + + L P+L + +++ + R W R+
Sbjct: 256 YESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTR---WVPLGVGTAAPRY--- 309
Query: 307 SMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA 366
AV DV +G I G V+ + + F + ++D R
Sbjct: 310 --------------AVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRT--- 352
Query: 367 PRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV------------TEFRWEVVGSQNGI 414
PN + FG GVH C G LA++E+ + + L+ T+ RW S+ +
Sbjct: 353 --PNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRW----SEGML 406
Query: 415 QYGPFPVP 422
GP +P
Sbjct: 407 LRGPLELP 414
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 11/185 (5%)
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL 289
+ D+I I ++FA T++ +W L L + AV E ++ G R++
Sbjct: 241 FSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELY----GDGRSV 296
Query: 290 TWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNS 349
++ + + + E++R+ + R A + E +G I +G V +
Sbjct: 297 SFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIP 356
Query: 350 EFFSEPQKVDPSRFKVAPRPN------TFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
E F +P P+R++ PR T++PFG G H C G A +++ + L+ E+
Sbjct: 357 EDFPDPHDFVPARYE-QPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREY 415
Query: 404 RWEVV 408
+E+
Sbjct: 416 EFEMA 420
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/428 (19%), Positives = 158/428 (36%), Gaps = 74/428 (17%)
Query: 23 NVFFATKQKRYGEIFKTHIL-------GCPCVMLASPEAAKFVLATHAHFFKPTY----P 71
+V T RYGE+ +T + G ++ E + VL P+ P
Sbjct: 33 DVHGLTLAGRYGELQETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDGRFVRGPSMTRDEP 92
Query: 72 KSKEKIIGPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALES-CAVGQ- 129
+++ +++ L H+RLR+LV + + R + L P IA ++ A GQ
Sbjct: 93 RTRPEMVK-GGLLSMDPPEHSRLRRLVVKAFTARRAESLRPRAREIAHELVDQMAATGQP 151
Query: 130 --VINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNSFPSNIPGTAY-HK 186
++ F +L + D + + +L + AY +
Sbjct: 152 ADLVAMFARQLPVRVICELLGVPSADHDRF-TRWSGAFLSTAEVTAEEMQEAAEQAYAYM 210
Query: 187 ALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAA 246
L +R + +++ L+ +RD++ +L+E ++ D IG+L A
Sbjct: 211 GDLIDRRRKEPTDDLVS--------------ALVQARDQQD-SLSEQELLDLAIGLLVAG 255
Query: 247 QDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILE 306
++T + + + L P+L + +++ + R W R+
Sbjct: 256 YESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTR---WVPLGVGTAVPRY--- 309
Query: 307 SMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA 366
AV DV +G I G V+ + + F + ++D R
Sbjct: 310 --------------AVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRT--- 352
Query: 367 PRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV------------TEFRWEVVGSQNGI 414
PN + FG GVH C G LA++E+ + + L+ T+ RW S+ +
Sbjct: 353 --PNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRW----SEGML 406
Query: 415 QYGPFPVP 422
GP +P
Sbjct: 407 LRGPLELP 414
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 11/185 (5%)
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL 289
+ D+I I ++FA T++ +W L L + AV E ++ G R++
Sbjct: 241 FSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELY----GDGRSV 296
Query: 290 TWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNS 349
++ + + + E++R+ + R A + E +G I +G V +
Sbjct: 297 SFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIP 356
Query: 350 EFFSEPQKVDPSRFKVAPRPN------TFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
E F +P P+R++ PR T++PFG G H C G A +++ + L+ E+
Sbjct: 357 EDFPDPHDFVPARYE-QPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREY 415
Query: 404 RWEVV 408
+E+
Sbjct: 416 EFEMA 420
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 27/170 (15%)
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL 289
LT D + N VL +TT +T + L P LL A++ V
Sbjct: 239 LTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGSADVDT--------- 289
Query: 290 TWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNS 349
+ E +R S R DV G +P G V+ + +
Sbjct: 290 -------------VVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDP 336
Query: 350 EFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHL 399
F +P P R +PN + FG G+H C G+ LA++E+ +++ L
Sbjct: 337 AEFDDPDTFLPGR-----KPNRHITFGHGMHHCLGSALARIELSVVLRVL 381
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 11/185 (5%)
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL 289
+ D+I I ++FA T++ +W L L + AV E ++ G R++
Sbjct: 241 FSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELY----GDGRSV 296
Query: 290 TWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNS 349
++ + + + E++R+ + R A + E +G I +G V +
Sbjct: 297 SFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIP 356
Query: 350 EFFSEPQKVDPSRFKVAPRPN------TFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
E F +P P+R++ PR T++PFG G H C G A +++ + L+ E+
Sbjct: 357 EDFPDPHDFVPARYE-QPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREY 415
Query: 404 RWEVV 408
+E+
Sbjct: 416 EFEMA 420
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 85/430 (19%), Positives = 161/430 (37%), Gaps = 78/430 (18%)
Query: 23 NVFFATKQKRYGEIFKTHIL-------GCPCVMLASPEAAKFVLATHAHFFKPTY----P 71
+V T RYGE+ +T + G ++ E + VL P+ P
Sbjct: 33 DVHGLTLAGRYGELQETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDGRFVRGPSMTRDEP 92
Query: 72 KSKEKIIGPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALES-CAVGQ- 129
+++ +++ L H+RLR+LV + + R + L P IA ++ A GQ
Sbjct: 93 RTRPEMVK-GGLLSMDPPEHSRLRRLVVKAFTARRAESLRPRAREIAHELVDQMAATGQP 151
Query: 130 --VINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNSFPSNIPGTAY-HK 186
++ F +L + D + + +L + AY +
Sbjct: 152 ADLVAMFARQLPVRVICELLGVPSADHDRF-TRWSGAFLSTAEVTAEEMQEAAEQAYAYM 210
Query: 187 ALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAA 246
L +R + +++ L+ +RD++ +L+E ++ D IG+L A
Sbjct: 211 GDLIDRRRKEPTDDLVS--------------ALVQARDQQD-SLSEQELLDLAIGLLVAG 255
Query: 247 QDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILE 306
++T + + + L P+L + +++ + + E
Sbjct: 256 YESTTTQIADFVYLLMTRPELRRQLLDRPELIPSA----------------------VEE 293
Query: 307 SMRMASI-ISFTF-REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFK 364
R + + F R AV DV +G I G V+ + + F + ++D R
Sbjct: 294 LTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRT- 352
Query: 365 VAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV------------TEFRWEVVGSQN 412
PN + FG GVH C G LA++E+ + + L+ T+ RW S+
Sbjct: 353 ----PNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRW----SEG 404
Query: 413 GIQYGPFPVP 422
+ GP +P
Sbjct: 405 MLLRGPLELP 414
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 125/354 (35%), Gaps = 66/354 (18%)
Query: 69 TYPKSKEKII---GPSALFFHQAD--YHARLRKLVQSSLSPERIKKLIPDIEAIAISALE 123
T+ ++I P+ H+ D H LRK+V S+ +P I L P I + S L
Sbjct: 88 TFSSDPTRVIEGASPTPGMIHEIDPPEHRALRKVVSSAFTPRTISDLEPRIRDVTRSLLA 147
Query: 124 SCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQ------NYLIVDKGYNSFPS 177
G+ + ++ F V I++ L E+ + + D +
Sbjct: 148 DA--GESFD-LVDVLAFPLPVTIVAELLGLPPMDHEQFGDWSGALVDIQMDDPTDPALAE 204
Query: 178 NI-----PGTAYHKALLARKRLS---QIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRT 229
I P TAY KA A +R ++S ++ GR
Sbjct: 205 RIADVLNPLTAYLKARCAERRADPGDDLISRLVLAEV-------------------DGRA 245
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL 289
L +++ A+ +L A TT +L I++ L ++P +A + +
Sbjct: 246 LDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPGRIPA--------- 296
Query: 290 TWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNS 349
+ E +R R E G IP V + + +S
Sbjct: 297 -------------IVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDS 343
Query: 350 EFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
+ +P + DPSR + FG GVH C G LA+LE + + ++ F
Sbjct: 344 DAHDDPDRFDPSRKSGG---AAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 125/354 (35%), Gaps = 66/354 (18%)
Query: 69 TYPKSKEKII---GPSALFFHQAD--YHARLRKLVQSSLSPERIKKLIPDIEAIAISALE 123
T+ ++I P+ H+ D H LRK+V S+ +P I L P I + S L
Sbjct: 68 TFSSDPTRVIEGASPTPGMIHEIDPPEHRALRKVVSSAFTPRTISDLEPRIRDVTRSLLA 127
Query: 124 SCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQ------NYLIVDKGYNSFPS 177
G+ + ++ F V I++ L E+ + + D +
Sbjct: 128 DA--GESFD-LVDVLAFPLPVTIVAELLGLPPMDHEQFGDWSGALVDIQMDDPTDPALAE 184
Query: 178 NI-----PGTAYHKALLARKRLS---QIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRT 229
I P TAY KA A +R ++S ++ GR
Sbjct: 185 RIADVLNPLTAYLKARCAERRADPGDDLISRLVLAEV-------------------DGRA 225
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL 289
L +++ A+ +L A TT +L I++ L ++P +A + +
Sbjct: 226 LDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPGRIPA--------- 276
Query: 290 TWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNS 349
+ E +R R E G IP V + + +S
Sbjct: 277 -------------IVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDS 323
Query: 350 EFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
+ +P + DPSR + FG GVH C G LA+LE + + ++ F
Sbjct: 324 DAHDDPDRFDPSRKSGG---AAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 118/318 (37%), Gaps = 33/318 (10%)
Query: 83 LFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSF 142
L F +H LR L+ + SP + L P I +A SAL Q E
Sbjct: 98 LVFLDPPHHTELRSLLTTEFSPSIVTGLRPRIAELA-SALLDRLRAQRRPDLVEGFAAPL 156
Query: 143 DVGILSIFGNLDDSYREKLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEII 202
+ ++S + + L+ N + + + + + G Y +A A + ++ +
Sbjct: 157 PILVISALLGIPEEDHTWLRANAVALQEASTTRARD--GRGYARAEAASQEFTRYFRREV 214
Query: 203 CXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLH 262
L+ +RD G L+ D I + +L A +TT + L
Sbjct: 215 DRRGGDDRDDLLT--LLVRARD-TGSPLSVDGIVGTCVHLLTAGHETTTNFLA------- 264
Query: 263 DNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAV 322
K + ++A + V+ E + T + E MR + R A
Sbjct: 265 ---KAVLTLRAHRDVLDELRTTPE------------STPAAVEELMRYDPPVQAVTRWAY 309
Query: 323 CDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHAC 382
D+ IP+G +V+ L + + + F +P +D R V FGLG+H C
Sbjct: 310 EDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA-----ERQVGFGLGIHYC 364
Query: 383 PGNELAKLEMLILIHHLV 400
G LA+ E I + L+
Sbjct: 365 LGATLARAEAEIGLRALL 382
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 133/337 (39%), Gaps = 56/337 (16%)
Query: 74 KEKIIGPSALFFHQAD--YHARLRKLVQSSLSPERIKKLIPDIEAIAISAL-ESCAVGQV 130
KEK P +L +AD H R R ++ LSP +K+L A A + + E A G
Sbjct: 89 KEKPWRPPSLIL-EADPPAHTRTRAVLSKVLSPATMKRLRDGFAAAADAKIDELLARGGN 147
Query: 131 INTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNSF-PSN------IPGTA 183
I+ ++ + ++ + + L RE L +V +N+F P N I +A
Sbjct: 148 IDAIADLAE-AYPLSVFPDAMGLKQEGRENLLPYAGLV---FNAFGPPNELRQSAIERSA 203
Query: 184 YHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVL 243
H+A +A + C G +++ + G +T ++ + +L
Sbjct: 204 PHQAYVAEQ----------CQRPNLAPGGF---GACIHAFSDTGE-ITPEEAPLLVRSLL 249
Query: 244 FAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRF 303
A DTT + + + L P ++A+ + +
Sbjct: 250 SAGLDTTVNGIAAAVYCLARFPDEFARLRADPSLARNA---------------------- 287
Query: 304 ILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRF 363
E++R S + FR DVE G I +G KV+ + + + + DP R+
Sbjct: 288 FEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWD-----DPDRY 342
Query: 364 KVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV 400
+ + + V FG GVH C G +A+LE +++ L
Sbjct: 343 DITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALA 379
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 30/175 (17%)
Query: 224 DEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNN 283
D G L++D+ ++ + A +TT + +T + ++P E K KV E+
Sbjct: 247 DIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYK---KVRPETAA 303
Query: 284 GGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFR 343
E +R A+ ++ R A+ D E G I KG +V+ +R
Sbjct: 304 D---------------------EIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYR 342
Query: 344 NIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPF-GLGVHACPGNELAKLEMLILIH 397
+ + + E F DP F + PN V F G G H C G LA++ + ++ +
Sbjct: 343 SANFDEEVFQ-----DPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFN 392
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 136/353 (38%), Gaps = 67/353 (18%)
Query: 53 EAAKFVLATHAHFF-KPTYPKSKEKIIGPSALFFHQADY----HARLRKLVQSSLSPERI 107
E + +L H HF +P + +SK + + Y H RLRK++ + RI
Sbjct: 62 EVVRRILGDHEHFTTRPQFTQSKSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRI 121
Query: 108 KKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVG---ILSIFGNLDDSYRE---KL 161
+++ P I+++ L+ + + F+ VG + + G D RE ++
Sbjct: 122 RRMEPAIQSLIDDRLDLLEAEGPSADLQGL--FADPVGAHALCELLGIPRDDQREFVRRI 179
Query: 162 KQNYLIVDKGYNSFPSNIPG-TAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLL 220
++N + +G + ++ Y LLAR+R G L
Sbjct: 180 RRNADL-SRGLKARAADSAAFNRYLDNLLARQRAD------------------PDDGLLG 220
Query: 221 NSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPK----LLEAVKAEQK 276
+ G +T++++ ++ +T A ++ + + L DNP L E+ + ++
Sbjct: 221 MIVRDHGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPEKAER 280
Query: 277 VVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGW 336
VV+E R L+ Q N R A+ DV G LI G
Sbjct: 281 VVNEL----VRYLSPVQAPNPRL---------------------AIKDVVIDGQLIKAGD 315
Query: 337 KVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAK 389
V+ + + +P +D +R V+ V FG G+H C G LA+
Sbjct: 316 YVLCSILMANRDEALTPDPDVLDANRAAVSD-----VGFGHGIHYCVGAALAR 363
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 30/175 (17%)
Query: 224 DEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNN 283
D G L++D+ ++ + A +TT + +T + ++P E K KV E+
Sbjct: 237 DIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYK---KVRPETAA 293
Query: 284 GGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFR 343
E +R A+ ++ R A+ D E G I KG +V+ +R
Sbjct: 294 D---------------------EIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYR 332
Query: 344 NIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPF-GLGVHACPGNELAKLEMLILIH 397
+ + + E F DP F + PN V F G G H C G LA++ + ++ +
Sbjct: 333 SANFDEEVFQ-----DPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFN 382
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 30/175 (17%)
Query: 224 DEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNN 283
D G L++D+ ++ + A +TT + +T + ++P E K KV E+
Sbjct: 238 DIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYK---KVRPETAA 294
Query: 284 GGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFR 343
E +R A+ ++ R A+ D E G I KG +V+ +R
Sbjct: 295 D---------------------EIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYR 333
Query: 344 NIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPF-GLGVHACPGNELAKLEMLILIH 397
+ + + E F DP F + PN V F G G H C G LA++ + ++ +
Sbjct: 334 SANFDEEVFQ-----DPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFN 383
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 30/175 (17%)
Query: 224 DEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNN 283
D G L++D+ ++ + A +TT + +T + ++P E K KV E+
Sbjct: 254 DIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYK---KVRPETAA 310
Query: 284 GGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFR 343
E +R A+ ++ R A+ D E G I KG +V+ +R
Sbjct: 311 D---------------------EIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYR 349
Query: 344 NIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPF-GLGVHACPGNELAKLEMLILIH 397
+ + + E F DP F + PN V F G G H C G LA++ + ++ +
Sbjct: 350 SANFDEEVFQ-----DPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFN 399
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 30/175 (17%)
Query: 224 DEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNN 283
D G L++D+ ++ + A +TT + +T + ++P E K KV E+
Sbjct: 245 DIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYK---KVRPETAA 301
Query: 284 GGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFR 343
E +R A+ ++ R A+ D E G I KG +V+ +R
Sbjct: 302 D---------------------EIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYR 340
Query: 344 NIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPF-GLGVHACPGNELAKLEMLILIH 397
+ + + E F DP F + PN V F G G H C G LA++ + ++ +
Sbjct: 341 SANFDEEVFQ-----DPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFN 390
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHES-NNGGQRA 288
L+ + I N + + + DTTA L L L NP + + ++ E S + Q+A
Sbjct: 273 LSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKA 332
Query: 289 LTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHN 348
T + +R + E++R+ + F R D+ + + IP G V ++ N
Sbjct: 333 TT--ELPLLRAALK---ETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRN 387
Query: 349 SEFFSEPQKVDPSRF---KVAPRPNTFVPFGLGVHACPG 384
+ F P++ +P R+ + + R VPFG G+ C G
Sbjct: 388 AALFPRPERYNPQRWLDIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 306 ESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKV 365
E++R S + FR +VE G +I +G KV+ + + + +S+P D +R
Sbjct: 288 EAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITR--- 344
Query: 366 APRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV 400
+ + V FG GVH C G +A+LE +++ L
Sbjct: 345 --KTSGHVGFGSGVHMCVGQLVARLEGEVMLSALA 377
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Query: 291 WAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSE 350
W + + + I E++R + + T R+ V+ I +G V + + + E
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEE 290
Query: 351 FFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFR 404
F + +K P R PN + FG G+H C G LA+LE I I FR
Sbjct: 291 VFHDGEKFIPDR-----NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR 339
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Query: 291 WAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSE 350
W + + + I E++R + + T R+ V+ I +G V + + + E
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEE 290
Query: 351 FFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFR 404
F + +K P R PN + FG G+H C G LA+LE I I FR
Sbjct: 291 VFHDGEKFIPDR-----NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR 339
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 306 ESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKV 365
E++R + + T R V+ + +I +G V + + + E F +P P R
Sbjct: 246 EALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR--- 302
Query: 366 APRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFR 404
PN + FG G+H C G LA+LE I + +FR
Sbjct: 303 --TPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFR 339
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A D++ L+ KG V+ L + + E F P ++ R P P + + FG G
Sbjct: 285 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRG 340
Query: 379 VHACPGNELAKLEMLILIHHLVTEF 403
H CPG+ L + I I L+ +
Sbjct: 341 QHFCPGSALGRRHAQIGIEALLKKM 365
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A D++ L+ KG V+ L + + E F P ++ R P P + + FG G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRG 341
Query: 379 VHACPGNELAKLEMLILIHHLVTEF 403
H CPG+ L + I I L+ +
Sbjct: 342 QHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A D++ L+ KG V+ L + + E F P ++ R P P + + FG G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRG 341
Query: 379 VHACPGNELAKLEMLILIHHLVTEF 403
H CPG+ L + I I L+ +
Sbjct: 342 QHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A D++ L+ KG V+ L + + E F P ++ R P P + + FG G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRG 341
Query: 379 VHACPGNELAKLEMLILIHHLVTEF 403
H CPG+ L + I I L+ +
Sbjct: 342 QHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A D++ L+ KG V+ L + + E F P ++ R P P + + FG G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRG 341
Query: 379 VHACPGNELAKLEMLILIHHLVTEF 403
H CPG+ L + I I L+ +
Sbjct: 342 QHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A D++ L+ KG V+ L + + E F P ++ R P P + + FG G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRG 341
Query: 379 VHACPGNELAKLEMLILIHHLVTEF 403
H CPG+ L + I I L+ +
Sbjct: 342 QHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 33/194 (17%)
Query: 219 LLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVV 278
+L + + +G L++ I I+ VL AA + L ++ +L +NP+ + V A++ +V
Sbjct: 243 ILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADRSLV 302
Query: 279 HESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKV 338
R I E++R + R+ D G I K V
Sbjct: 303 P----------------------RAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIV 340
Query: 339 MPLFRNIHHNSEFFSEPQKVDPSR--------FKVAPRPNTFVPFGLGVHACPGNELAKL 390
+ + + E F +P + R F A R + FG G+H C G AK
Sbjct: 341 FCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAAR---HLAFGSGIHNCVGTAFAKN 397
Query: 391 EMLILIHHLVTEFR 404
E+ I+ + ++ + R
Sbjct: 398 EIEIVANIVLDKMR 411
>pdb|3LXH|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXH|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXI|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d1
pdb|3LXI|B Chain B, Crystal Structure Of Camphor-Bound Cyp101d1
Length = 421
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 124/324 (38%), Gaps = 53/324 (16%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIAISALES------CAVGQVINTFKEMKKFSFDV 144
H RK + L+ I+KL I IA+ +E C G +T ++ F
Sbjct: 110 HTPYRKAIDKGLNLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEFSTVFPVRVFLALA 169
Query: 145 GILSIFGNLDDSYREKLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICX 204
G+ ++D+ + L N + G N P A K + V+ II
Sbjct: 170 GL-----PVEDATKLGLLANEMTRPSG------NTPEEQGRSLEAANKGFFEYVAPIIAA 218
Query: 205 XXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDN 264
+LN + G+ + +D+ + +L DT + L +++ YL +
Sbjct: 219 RRGGSGTDLITR--ILNVEID-GKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRH 275
Query: 265 PKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCD 324
P+ + ++ E + R + E R +++S R V D
Sbjct: 276 PETVAEMRREPLKLQ----------------------RGVEELFRRFAVVS-DARYVVSD 312
Query: 325 VEYKGFLIPKGWKVMPLFRNIHH-NSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACP 383
+E+ G ++ +G ++ L +H + +P VD SR V T F G H C
Sbjct: 313 MEFHGTMLKEGDLIL-LPTALHGLDDRHHDDPMTVDLSRRDV-----THSTFAQGPHRCA 366
Query: 384 GNELAKLEMLILIHHL---VTEFR 404
G LA+LE+ +++ + EFR
Sbjct: 367 GMHLARLEVTVMLQEWLARIPEFR 390
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 163/442 (36%), Gaps = 60/442 (13%)
Query: 2 PPGSMGW-PFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLA 60
PP G P++G L+ + +D F ++++G+IF G +L VL+
Sbjct: 20 PPLDKGMIPWLGHALE-FGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLS 78
Query: 61 THAHFFKPTYPKSKEKIIGPSALFFH-------QADYHARLRKLVQSSLSPERIKKLIPD 113
A + +Y + K I L H +A+ H + L Q S S + +L+
Sbjct: 79 DVASLDQTSYAQVLMKRIFNMILPSHNPESEKKRAEMHFQGASLTQLSNSMQNNLRLLMT 138
Query: 114 IEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYN 173
+ + E G F F G L++FG +++ L Q Y + +
Sbjct: 139 PSEMGLKTSEWKKDG----LFNLCYSLLFKTGYLTVFG-AENNNSAALTQIY----EEFR 189
Query: 174 SFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKGRTLTED 233
F +P LAR +++ +I G R++
Sbjct: 190 RFDKLLPK-------LARTTVNKEEKQIASAAREKLWKWLTPSGLDRKPREQSWLGSYVK 242
Query: 234 QIADNIIGV----------LFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNN 283
Q+ D I L+ Q W++ YL +P+ L AV+ E +
Sbjct: 243 QLQDEGIDAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ------- 295
Query: 284 GGQRALTWAQTKNMRCTYRFILESMRM--ASIIS--FTFREAVCDVEYKGFLIPKGWK-- 337
GG+ + KN + E++R+ A++I+ T + +C + + + +G +
Sbjct: 296 GGKHLRLEERQKNTPVFDSVLWETLRLTAAALITRDVTQDKKICLSNGQEYHLRRGDRLC 355
Query: 338 VMPLFR-----NIHHNSEFFSEPQKVDPSR------FKVAPRPNT-FVPFGLGVHACPGN 385
V P IH E F + ++ R FK R VP+G + CPG
Sbjct: 356 VFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGR 415
Query: 386 ELAKLEMLILIHHLVTEFRWEV 407
A + L+ ++T F E+
Sbjct: 416 HFAVHAIKELVFTILTRFDVEL 437
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 227 GRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQ 286
GR T D+ +LF DT A+++ + +L +P+ +Q+++ E +
Sbjct: 216 GRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPE-------DQRLLRERPD--- 265
Query: 287 RALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIH 346
L A E MR ++ + R AV DV+ G I KG V ++
Sbjct: 266 --LIPAAAD----------ELMRRYPTVAVS-RNAVADVDADGVTIRKGDLV--YLPSVL 310
Query: 347 HNSE--FFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHH 398
HN + F P++V RF P G+G H C G LA++E+++ +
Sbjct: 311 HNLDPASFEAPEEV---RFDRGLAPIRHTTMGVGAHRCVGAGLARMEVIVFLRE 361
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 27/175 (15%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGG 285
G L+ +IA I ++ A +TT + +T + L P+
Sbjct: 255 DGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPE------------------- 295
Query: 286 QRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNI 345
QR W+ + T + E +R AS + + R D+E +G + G KV + +
Sbjct: 296 QRDRWWSDFDGLAPTA--VEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSA 353
Query: 346 HHNSEFFSEPQKVDPSRFKVAPRPNTFVPF-GLGVHACPGNELAKLEMLILIHHL 399
+ + F+ DP F +A PN + F G G H C G LA+ E+ + L
Sbjct: 354 NRDESKFA-----DPWTFDLARNPNPHLGFGGGGAHFCLGANLARREIRVAFDEL 403
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A D++ L+ KG V+ L + + E F P ++ R P P + + G G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAHGRG 341
Query: 379 VHACPGNELAKLEMLILIHHLVTEF 403
H CPG+ L + I I L+ +
Sbjct: 342 QHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 291 WAQTK-NMRCTYRFILESMRMASIISFT-FREAVCDVEYKGFLIPKGWKVMPLFRNIHHN 348
W + K N + + E +R + + T R A D E G IP G V H +
Sbjct: 276 WMKIKENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRD 335
Query: 349 SEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
F++ + D + + AP + FG G H C G LA+LE+ + L T
Sbjct: 336 PRVFADADRFDITVKREAPS----IAFGGGPHFCLGTALARLELTEAVAALATRL 386
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 291 WAQTK-NMRCTYRFILESMRMASIISFT-FREAVCDVEYKGFLIPKGWKVMPLFRNIHHN 348
W + K N + + E +R + + T R A D E G IP G V H +
Sbjct: 266 WMKIKENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRD 325
Query: 349 SEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
F++ + D + + AP + FG G H C G LA+LE+ + L T
Sbjct: 326 PRVFADADRFDITVKREAPS----IAFGGGPHFCLGTALARLELTEAVAALATRL 376
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A D++ L+ KG V+ L + + E F P ++ R P P + + FG G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRG 341
Query: 379 VHACPGNELAKLEMLILIHHLVTEF 403
H C G+ L + I I L+ +
Sbjct: 342 QHFCLGSALGRRHAQIGIEALLKKM 366
>pdb|3O1A|A Chain A, Structure Of Oxye (Cyp165d3), A Cytochrome P450 Involved
In Teicoplanin Biosynthesis
Length = 417
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 135/363 (37%), Gaps = 69/363 (19%)
Query: 53 EAAKFVLATHAHF--FKPTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSLSPERIKKL 110
+ + +LA H F +P ++ ++ P L + H RLR+ V + S R+++L
Sbjct: 81 DEVRAILADHERFSSMRPVDDEADRALL-PGILQAYDPPDHTRLRRTVAPAYSARRMERL 139
Query: 111 IPDIEAIAISALESC-AVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVD 169
P IE I L+ +VG ++ F + I F + + +L + +I +
Sbjct: 140 RPRIEEIVEECLDDFESVGAPVD-FVRHAAWPIPAYIACEFLGVPRDDQAELSR--MIRE 196
Query: 170 KGYNSFP-----SNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRD 224
+ P S + Y K L + KR I G ++
Sbjct: 197 SRESRLPRQRTLSGLGIVNYTKRLTSGKRRDPGDGMI---------------GVIVR--- 238
Query: 225 EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
E G ++++++A G L A + A+ L + L +P + ++ + +++ +
Sbjct: 239 EHGAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPELIDSATE- 297
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTF-REAVCDVEYKGFLIPKGWKVMPLFR 343
E +R ASI+ R A+ DV G R
Sbjct: 298 ---------------------EVLRHASIVEAPAPRVALADVRMAG-------------R 323
Query: 344 NIHHNSEF---FSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV 400
+IH + RF + T + FG G+H C G LA+L++ + + +V
Sbjct: 324 DIHAGDVLTCSMLATNRAPGDRFDITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVV 383
Query: 401 TEF 403
F
Sbjct: 384 GRF 386
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A+ DVE G I G V + + + + F +P ++D R PN + +G G
Sbjct: 298 RIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR-----DPNPHLAYGNG 352
Query: 379 VHACPGNELAKLEMLILIHHLVTEF 403
H C G LA+++ +L+ L+
Sbjct: 353 HHFCTGAVLARMQTELLVDTLLERL 377
>pdb|3OO3|A Chain A, Crystal Structure Of The Orf6 (Cyp165d3) Monooxygenase
Involved In Teicoplanin Biosynthesis
Length = 384
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 134/360 (37%), Gaps = 69/360 (19%)
Query: 56 KFVLATHAHF--FKPTYPKSKEKIIGPSALFFHQADYHARLRKLVQSSLSPERIKKLIPD 113
+ +LA H F +P ++ ++ P L + H RLR+ V + S R+++L P
Sbjct: 51 RAILADHERFSSMRPVDDEADRALL-PGILQAYDPPDHTRLRRTVAPAYSARRMERLRPR 109
Query: 114 IEAIAISALESC-AVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGY 172
IE I L+ +VG ++ F + I F + + +L + +I +
Sbjct: 110 IEEIVEECLDDFESVGAPVD-FVRHAAWPIPAYIACEFLGVPRDDQAELSR--MIRESRE 166
Query: 173 NSFP-----SNIPGTAYHKALLARKRLSQIVSEIICXXXXXXXXXXXXXGCLLNSRDEKG 227
+ P S + Y K L + KR I G ++ E G
Sbjct: 167 SRLPRQRTLSGLGIVNYTKRLTSGKRRDPGDGMI---------------GVIVR---EHG 208
Query: 228 RTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQR 287
++++++A G L A + A+ L + L +P + ++ + +++ +
Sbjct: 209 AEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPELIDSATE---- 264
Query: 288 ALTWAQTKNMRCTYRFILESMRMASIISFTF-REAVCDVEYKGFLIPKGWKVMPLFRNIH 346
E +R ASI+ R A+ DV G R+IH
Sbjct: 265 ------------------EVLRHASIVEAPAPRVALADVRMAG-------------RDIH 293
Query: 347 HNSEF---FSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
+ RF + T + FG G+H C G LA+L++ + + +V F
Sbjct: 294 AGDVLTCSMLATNRAPGDRFDITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRF 353
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLG 378
R A+ DVE G I G V + + + + F +P ++D R PN + +G G
Sbjct: 298 RIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR-----DPNPHLAYGNG 352
Query: 379 VHACPGNELAKLEMLILIHHLVTEF 403
H C G LA+++ +L+ L+
Sbjct: 353 HHFCTGAVLARMQTELLVDTLLERL 377
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 28/159 (17%)
Query: 242 VLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTY 301
+L A +TTA++++ + L +P+ L VKA N G+ +
Sbjct: 242 LLTAGHETTANMISLGVVGLLSHPEQLTVVKA---------NPGRTPMA----------- 281
Query: 302 RFILESMRMASIIS-FTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDP 360
+ E +R +I T R A DVE G I G V+ + + + F +P +D
Sbjct: 282 --VEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDV 339
Query: 361 SRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHL 399
R + FG G H C G LA++E+ I+ L
Sbjct: 340 ERGA-----RHHLAFGFGPHQCLGQNLARMELQIVFDTL 373
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 70/208 (33%), Gaps = 39/208 (18%)
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL 289
L ++ + +L A +T AS LTW L P + V ++ + R
Sbjct: 206 LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAALAAFQEALRLY 265
Query: 290 TWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNS 349
A R +L R+ + V Y P+G P
Sbjct: 266 PPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQRLY----FPEGEAFQP--------E 313
Query: 350 EFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVG 409
F +E + PS + PFGLG C G + A LE I++ FR + +
Sbjct: 314 RFLAE--RGTPS--------GRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPL- 362
Query: 410 SQNGIQYGPFP--------VPEKGLPAR 429
PFP PE GLPAR
Sbjct: 363 --------PFPRVLAQVTLRPEGGLPAR 382
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 324 DVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACP 383
DVE G LI G + + + + E F +P D +R A R + FGLG H+C
Sbjct: 290 DVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAASR---NLSFGLGPHSCA 346
Query: 384 GNELAKLEMLILIHHLVTEFRWEVVGSQNGIQYGPFPVPEKGLP 427
G +++ E + L + + + + + F + LP
Sbjct: 347 GQIISRAEATTVFAVLAERYERIELAEEPTVAHNDFARRYRKLP 390
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 306 ESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKV 365
E +R S+ R A D+E G I G V+ ++ +++ + P D R
Sbjct: 282 ELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR--- 338
Query: 366 APRPNTFVPFGLGVHACPGNELAKLEMLILI 396
V FG G+H C G LA+ E+ I +
Sbjct: 339 --NARHHVGFGHGIHQCLGQNLARAELEIAL 367
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 324 DVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACP 383
DVE G LI G + + + + E F +P D +R A R + FGLG H+C
Sbjct: 288 DVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAASR---NLSFGLGPHSCA 344
Query: 384 GNELAKLEMLILIHHLVTEFRWEVVGSQNGIQYGPFPVPEKGLP 427
G +++ E + L + + + + + F + LP
Sbjct: 345 GQIISRAEATTVFAVLAERYERIELAEEPTVAHNDFARRYRKLP 388
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 136/392 (34%), Gaps = 46/392 (11%)
Query: 24 VFFATKQKRYG-EIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKSKEK-IIGPS 81
+F + +RY ++F+ +LG + + EAAK T + PK +K + G +
Sbjct: 23 LFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLFGVN 82
Query: 82 ALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFS 141
A+ H + L S ++P K+L + +A+ + F+E K+
Sbjct: 83 AIQGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEIL 142
Query: 142 FDVGILSIFGNLDDSYREKLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEI 201
V L ++ ++ +++ + + + G + K AR R + + +
Sbjct: 143 CRVACYWAGVPLKETEVKERADDFIDMVDAFGAV-----GPRHWKGRRARPRAEEWIEVM 197
Query: 202 ICXXXXXXXXXXXXXGCLLNS----RDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWI 257
I G L+ E G L A +I VL + L +
Sbjct: 198 I--EDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELINVLRPIV-AISYFLVFS 254
Query: 258 LKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFT 317
LH++PK E W ++ N R F+ E R F
Sbjct: 255 ALALHEHPKYKE---------------------WLRSGNSREREMFVQEVRRYYPFGPFL 293
Query: 318 FREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTF--VPF 375
D + KG V+ +H+ + P + P RF N F +P
Sbjct: 294 GALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERF-AEREENLFDMIPQ 352
Query: 376 GLG----VHACPGN----ELAKLEMLILIHHL 399
G G H CPG E+ K + L+H +
Sbjct: 353 GGGHAEKGHRCPGEGITIEVMKASLDFLVHQI 384
>pdb|1T85|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam Mutant (L358pC334A)
pdb|1T86|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
pdb|1T86|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
Length = 414
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 229 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 271
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 272 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 324
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H CPG LA+ E+++ + +T
Sbjct: 325 SGLDERENAAPMHVDFSRQKV-----SHTTFGHGSHLCPGQHLARREIIVTLKEWLT 376
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 28/180 (15%)
Query: 225 EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
E G T++++ + V+ A D + ++ + + +P+ ++A + +++
Sbjct: 216 EYGDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ-------S 268
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASI-ISFTFREAVCDVEYKGFLIPKGWKVMPLFR 343
QRA+ E +R ++ S T R A D+ G I KG V+
Sbjct: 269 AQRAVD---------------ELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLP 313
Query: 344 NIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEF 403
+ + + ++D +R P V FG GVH C G LA+LE+ + L F
Sbjct: 314 AANRDPALAPDVDRLDVTR-----EPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRF 368
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 58/315 (18%), Positives = 119/315 (37%), Gaps = 40/315 (12%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIF 150
H RLR LV +L+ R++ + I + L+ + K + + +++
Sbjct: 100 HRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVADL 159
Query: 151 GNLDDSYREKLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICXXXXXXX 210
++++ +LK ++ +K +++ T + + L+ I+++ +
Sbjct: 160 MGIEEARLPRLK---VLFEKFFST------QTPPEEVVATLTELASIMTDTVAAKRAAPG 210
Query: 211 XXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEA 270
L E G LT+ +I + ++ A +TT S++
Sbjct: 211 DDLT---SALIQASENGDHLTDAEIVSTLQLMVAAGHETTISLIV--------------- 252
Query: 271 VKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTF-REAVCDVEYKG 329
VV+ S + QRAL + + E++R ++ S R A DV
Sbjct: 253 ----NAVVNLSTHPEQRALVLSGEAEWSA---VVEETLRFSTPTSHVLIRFAAEDVPVGD 305
Query: 330 FLIPKGWKVMPLFRNIHHNSEFFS-EPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELA 388
+IP G ++ + + + + D +R N + FG G H CPG L+
Sbjct: 306 RVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTS----GNRHISFGHGPHVCPGAALS 361
Query: 389 KLEMLILIHHLVTEF 403
++E + + L F
Sbjct: 362 RMEAGVALPALYARF 376
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 70/208 (33%), Gaps = 39/208 (18%)
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL 289
L ++ + +L A +T AS LTW L P + V ++ + R
Sbjct: 206 LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAALAAFQEALRLY 265
Query: 290 TWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNS 349
A R +L R+ + V + P G P
Sbjct: 266 PPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLH----FPDGEAFRP--------- 312
Query: 350 EFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVG 409
E F E ++ PS + PFGLG C G + A LE I++ FR + +
Sbjct: 313 ERFLE-ERGTPS--------GRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPL- 362
Query: 410 SQNGIQYGPFP--------VPEKGLPAR 429
PFP PE GLPAR
Sbjct: 363 --------PFPRVLAQVTLRPEGGLPAR 382
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/316 (17%), Positives = 104/316 (32%), Gaps = 46/316 (14%)
Query: 91 HARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIF 150
H RKLV +P +++ + P + + LE + E+ K + +
Sbjct: 103 HTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRANGGGDIVTELFKPLPSMVVAHYL 162
Query: 151 GNLDDSYREKLKQNYLIVD----KGYNSFPSNIPGT--AYHKALLARKRLSQIVSEIICX 204
G ++ + + IV G + + G+ AY L+ R+R I
Sbjct: 163 GVPEEDWTQFDGWTQAIVAANAVDGATTGALDAVGSMMAYFTGLIERRRTEPADDAISHL 222
Query: 205 XXXXXXXXXXXXGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDN 264
G L I ++ A DT +L + LH
Sbjct: 223 VAAGVGADGDTAGTL--------------SILAFTFTMVTAGNDTVTGMLGGSMPLLHRR 268
Query: 265 PKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCD 324
P +++++ + G A + E +R+ S + R D
Sbjct: 269 PD-------QRRLLLDDPEGIPDA---------------VEELLRLTSPVQGLARTTTRD 306
Query: 325 VEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPG 384
V IP G +V+ L+ + + + + D + V P + F G H C G
Sbjct: 307 VTIGDTTIPAGRRVLLLYGSANRDERQYGP----DAAELDVTRCPRNILTFSHGAHHCLG 362
Query: 385 NELAKLEMLILIHHLV 400
A+++ + + L+
Sbjct: 363 AAAARMQCRVALTELL 378
>pdb|2GQX|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GQX|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GR6|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
pdb|2GR6|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
Length = 405
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 28/176 (15%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGG 285
GR +T D+ +L DT + L++ +++L +P+ H
Sbjct: 220 NGRPITSDEAKRMCGALLLGGLDTVVNFLSFSMEFLAKSPE------------HR----- 262
Query: 286 QRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNI 345
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 263 QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLS 316
Query: 346 HHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 317 GLDERENAAPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 367
>pdb|3NV5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d2
pdb|3NV6|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d2
Length = 452
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFS-EPQKVDPSRFKVAPRPNTFVPFGL 377
R D EYKG + +G ++ L +H + + EP K+D SR R + FG
Sbjct: 341 RMVAKDQEYKGVFLKRGDMIL-LPTALHGLDDAANPEPWKLDFSR-----RSISHSTFGG 394
Query: 378 GVHACPGNELAKLEMLILI 396
G H C G LA++E+++ +
Sbjct: 395 GPHRCAGMHLARMEVIVTL 413
>pdb|4DXY|A Chain A, Crystal Structures Of Cyp101d2 Y96a Mutant
Length = 417
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 319 REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFS-EPQKVDPSRFKVAPRPNTFVPFGL 377
R D EYKG + +G ++ L +H + + EP K+D SR R + FG
Sbjct: 306 RMVAKDQEYKGVFLKRGDMIL-LPTALHGLDDAANPEPWKLDFSR-----RSISHSTFGG 359
Query: 378 GVHACPGNELAKLEMLILI 396
G H C G LA++E+++ +
Sbjct: 360 GPHRCAGMHLARMEVIVTL 378
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 304 ILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRF 363
+ E +R+ S + R DV IP G +V+ L+ + + + + D +
Sbjct: 286 VEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGP----DAAEL 341
Query: 364 KVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV 400
V P + F G H C G A+++ + + L+
Sbjct: 342 DVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELL 378
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 304 ILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRF 363
+ E +R+ S + R DV IP G +V+ L+ + + + + D +
Sbjct: 287 VEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGP----DAAEL 342
Query: 364 KVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV 400
V P + F G H C G A+++ + + L+
Sbjct: 343 DVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELL 379
>pdb|2H7R|A Chain A, L244a Mutant Of Cytochrome P450cam Complexed With
Imidazole
pdb|2H7S|A Chain A, L244a Mutant Of Cytochrome P450cam
pdb|2H7S|C Chain C, L244a Mutant Of Cytochrome P450cam
Length = 414
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 28/176 (15%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGG 285
GR +T D+ +L DT + L++ +++L +P+ H
Sbjct: 229 NGRPITSDEAKRMCGALLVGGLDTVVNFLSFSMEFLAKSPE------------HR----- 271
Query: 286 QRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNI 345
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 272 QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLS 325
Query: 346 HHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 326 GLDERENAAPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|4EK1|A Chain A, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
pdb|4EK1|B Chain B, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
Length = 414
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPK-LLEAVKAEQKVVHESNN 283
GR +T D+ A + G+L DT + L++ +++L +P+ E ++ +++ S
Sbjct: 229 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAASE- 286
Query: 284 GGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFR 343
E +R S+++ R D E+ G + KG +++
Sbjct: 287 ----------------------ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQM 323
Query: 344 NIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 324 LSGLDERENAAPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|3FWG|A Chain A, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
pdb|3FWG|B Chain B, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
Length = 405
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLF-AAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 220 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 262
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 263 -QELIQRPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 315
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+L++++ + +T
Sbjct: 316 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARLQIIVTLKEWLT 367
>pdb|1QMQ|A Chain A, Optical Detection Of Cytochrome P450 By Sensitizer-Linked
Substrates
pdb|1GJM|A Chain A, Covalent Attachment Of An Electroactive Sulphydryl Reagent
In The Active Site Of Cytochrome P450cam
pdb|1K2O|A Chain A, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1K2O|B Chain B, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1T87|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T87|B Chain B, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T88|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|1T88|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|3L61|A Chain A, Crystal Structure Of Substrate-Free P450cam At 200 Mm [k+]
pdb|3L62|A Chain A, Crystal Structure Of Substrate-Free P450cam At Low [k+]
pdb|3L63|A Chain A, Crystal Structure Of Camphor-Bound P450cam At Low [k+]
pdb|3OIA|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8gluetg-Bio
pdb|3OL5|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized With
A Tethered Substrate Analog 3oh-Adac1-C8-Dans
pdb|3P6M|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6N|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6O|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-Etg-Dans
pdb|3P6P|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog Adac1-C6-Bio
pdb|3P6Q|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-Etg-Boc
pdb|3P6R|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3oh-Adac1-Etg-Boc
pdb|3P6S|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6T|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6U|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C6-Dans
pdb|3P6V|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3et-Adac1-Etg-Boc
pdb|3P6W|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-Etg-Boc
pdb|3P6X|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C8-Dans
pdb|4G3R|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cam
pdb|4G3R|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cam
Length = 414
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 229 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 271
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 272 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 324
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 325 SGLDERENAAPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|2A1M|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
pdb|2A1M|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
Length = 415
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 230 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 272
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 273 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 325
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 326 SGLDERENAAPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|2ZUJ|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant(D297l)
Length = 415
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 230 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 272
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 273 -QELIERPERIPAACE-----ELLRRFSLVALG-RILTSDYEFHGVQLKKGDQILLPQML 325
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 326 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 28/195 (14%)
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAE-QKVVHESNNGGQRA 288
++E+ A ++ L+A Q W+L +L NP+ L AV+ E + ++ ++ +
Sbjct: 258 VSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQT 317
Query: 289 LTWAQT--KNMRCTYRFILESMRMASIISFTFREAVCDV-----EYKGFLIPKGWKVMPL 341
T Q + + ES+R+ + F RE V D+ + + F + +G +++
Sbjct: 318 TTLPQKVLDSTPVLDSVLSESLRLTA-APFITREVVVDLAMPMADGREFNLRRGDRLLLF 376
Query: 342 -FRNIHHNSEFFSEPQKVDPSRF------------KVAPR-PNTFVPFGLGVHACPG--- 384
F + + E +++P+ +RF K R N +P+G G + C G
Sbjct: 377 PFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSY 436
Query: 385 --NELAKLEMLILIH 397
N + + L+L+H
Sbjct: 437 AVNSIKQFVFLVLVH 451
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 28/195 (14%)
Query: 230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAE-QKVVHESNNGGQRA 288
++E+ A ++ L+A Q W+L +L NP+ L AV+ E + ++ ++ +
Sbjct: 246 VSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQT 305
Query: 289 LTWAQT--KNMRCTYRFILESMRMASIISFTFREAVCDV-----EYKGFLIPKGWKVMPL 341
T Q + + ES+R+ + F RE V D+ + + F + +G +++
Sbjct: 306 TTLPQKVLDSTPVLDSVLSESLRLTA-APFITREVVVDLAMPMADGREFNLRRGDRLLLF 364
Query: 342 -FRNIHHNSEFFSEPQKVDPSRF------------KVAPR-PNTFVPFGLGVHACPG--- 384
F + + E +++P+ +RF K R N +P+G G + C G
Sbjct: 365 PFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSY 424
Query: 385 --NELAKLEMLILIH 397
N + + L+L+H
Sbjct: 425 AVNSIKQFVFLVLVH 439
>pdb|2A1O|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
pdb|2A1O|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
Length = 415
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 306 ESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKV 365
E +R S+++ R D E+ G + KG +++ + + P VD SR KV
Sbjct: 288 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKV 346
Query: 366 APRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ FG G H C G LA+ E+++ + +T
Sbjct: 347 -----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|2A1N|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
pdb|2A1N|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
Length = 415
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 306 ESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKV 365
E +R S+++ R D E+ G + KG +++ + + P VD SR KV
Sbjct: 288 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKV 346
Query: 366 APRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ FG G H C G LA+ E+++ + +T
Sbjct: 347 -----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1J51|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|C Chain C, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|D Chain D, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1MPW|A Chain A, Molecular Recognition In (+)-a-pinene Oxidation By
Cytochrome P450cam
pdb|1MPW|B Chain B, Molecular Recognition In (+)-a-pinene Oxidation By
Cytochrome P450cam
pdb|2FRZ|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A)
pdb|2FRZ|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A)
Length = 414
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 306 ESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKV 365
E +R S+++ R D E+ G + KG +++ + + P VD SR KV
Sbjct: 287 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKV 345
Query: 366 APRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ FG G H C G LA+ E+++ + +T
Sbjct: 346 -----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|2ZUI|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297n)
Length = 415
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 230 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 272
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 273 -QELIERPERIPAACE-----ELLRRFSLVA-NGRILTSDYEFHGVQLKKGDQILLPQML 325
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 326 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|2ZUH|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297a)
Length = 415
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 230 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 272
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 273 -QELIERPERIPAACE-----ELLRRFSLVA-AGRILTSDYEFHGVQLKKGDQILLPQML 325
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 326 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1DZ8|A Chain A, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ8|B Chain B, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ6|A Chain A, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ6|B Chain B, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ9|A Chain A, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ9|B Chain B, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ4|A Chain A, Ferric P450cam From Pseudomonas Putida
pdb|1DZ4|B Chain B, Ferric P450cam From Pseudomonas Putida
pdb|1O76|A Chain A, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1O76|B Chain B, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1UYU|A Chain A, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1UYU|B Chain B, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1AKD|A Chain A, Cytochrome P450cam From Pseudomonas Putida, Complexed With
1s-Camphor
Length = 414
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 229 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 271
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 272 -QELIQRPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 324
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 325 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|2LQD|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 405
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 220 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 262
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 263 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 315
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 316 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 367
>pdb|2FER|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|B Chain B, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 411
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 220 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 262
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 263 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 315
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 316 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 367
>pdb|1P2Y|A Chain A, Crystal Structure Of Cytochrome P450cam In Complex With
(S)- (-)-Nicotine
pdb|1P7R|A Chain A, Crystal Structure Of Reduced, Co-Exposed Complex Of
Cytochrome P450cam With (S)-(-)-Nicotine
Length = 420
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 229 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 271
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 272 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 324
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 325 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|1RE9|A Chain A, Crystal Structure Of Cytochrome P450-cam With A
Fluorescent Probe D-8-ad (adamantane-1-carboxylic
Acid-5-dimethylamino-
Naphthalene-1-sulfonylamino-octyl-amide)
pdb|1YRC|A Chain A, X-ray Crystal Structure Of Hydrogenated Cytochrome P450cam
pdb|1YRD|A Chain A, X-Ray Crystal Structure Of Perdeuterated Cytochrome
P450cam
pdb|2H7Q|A Chain A, Cytochrome P450cam Complexed With Imidazole
pdb|1CP4|A Chain A, Formation, Crystal Structure, And Rearrangement Of A
Cytochrome P450-Cam Iron-Phenyl Complex
pdb|1NOO|A Chain A, Cytochrome P450-Cam Complexed With 5-Exo-Hydroxycamphor
pdb|1PHA|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHB|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHC|A Chain A, Crystal Structure Of Substrate-free Pseudomonas Putida
Cytochrome P450
pdb|1PHD|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHE|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHF|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|1PHG|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|2CPP|A Chain A, High-Resolution Crystal Structure Of Cytochrome P450-Cam
pdb|3CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|3CPP|A Chain A, Crystal Structure Of The Carbon
Monoxy-Substrate-Cytochrome P450-Cam Ternary Complex
pdb|4CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|4CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|5CP4|A Chain A, Cryogenic Structure Of P450cam
pdb|5CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P-450(Cam)
pdb|6CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|7CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P450(Cam)
pdb|8CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
Length = 414
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 229 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 271
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 272 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 324
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 325 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|1IWJ|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(109k) Cytochrome P450cam
Length = 415
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 230 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 272
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 273 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 325
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 326 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|2FE6|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 421
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 230 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 272
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 273 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 325
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 326 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1IWK|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(112k) Cytochrome P450cam
Length = 415
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 230 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 272
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 273 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 325
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 326 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1GEK|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GEM|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1IWI|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Cytochrome P450cam
pdb|2ZAW|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 6- Methyl-6-Depropionated Hemin
pdb|2ZAX|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2Z97|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 7- Methyl-7-Depropionated Hemin
pdb|2ZWT|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2ZWU|A Chain A, Crystal Structure Of Camphor Soaked Ferric Cytochrome
P450cam
pdb|2L8M|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 415
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 230 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 272
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 273 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 325
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 326 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1LWL|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-8-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Octyl-Amide)
pdb|1RF9|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-4-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Butyl-Amide)
Length = 417
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 230 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 272
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 273 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 325
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 326 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|1C8J|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
pdb|1C8J|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
Length = 414
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 229 NGRPITSDE-AKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPE------------HR---- 271
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 272 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 324
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 325 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|2QBL|A Chain A, Crystal Structure Of Ferric G248t Cytochrome P450cam
pdb|2QBM|A Chain A, Crystal Structure Of The P450cam G248t Mutant In The
Cyanide Bound State
Length = 421
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 230 NGRPITSDE-AKRMCGLLLVTGLDTVVNFLSFSMEFLAKSPE------------HR---- 272
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 273 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 325
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 326 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|2QBN|A Chain A, Crystal Structure Of Ferric G248v Cytochrome P450cam
pdb|2QBO|A Chain A, Crystal Structure Of The P450cam G248v Mutant In The
Cyanide Bound State
Length = 421
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 226 KGRTLTEDQIADNIIGVLFAAQ-DTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
GR +T D+ A + G+L DT + L++ +++L +P+ H
Sbjct: 230 NGRPITSDE-AKRMCGLLLVVGLDTVVNFLSFSMEFLAKSPE------------HR---- 272
Query: 285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRN 344
Q + + C E +R S+++ R D E+ G + KG +++
Sbjct: 273 -QELIERPERIPAACE-----ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQML 325
Query: 345 IHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ + P VD SR KV + FG G H C G LA+ E+++ + +T
Sbjct: 326 SGLDERENACPMHVDFSRQKV-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|6CP4|A Chain A, P450cam D251n Mutant
Length = 414
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 306 ESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKV 365
E +R S+++ R D E+ G + KG +++ + + P VD SR KV
Sbjct: 287 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQKV 345
Query: 366 APRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ FG G H C G LA+ E+++ + +T
Sbjct: 346 -----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|2CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
Length = 414
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 306 ESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKV 365
E +R S+++ R D E+ G + KG +++ + + P VD SR KV
Sbjct: 287 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQKV 345
Query: 366 APRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ FG G H C G LA+ E+++ + +T
Sbjct: 346 -----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 376
>pdb|1GEB|A Chain A, X-Ray Crystal Structure And Catalytic Properties Of
Thr252ile Mutant Of Cytochrome P450cam
Length = 415
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 306 ESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKV 365
E +R S+++ R D E+ G + KG +++ + + P VD SR KV
Sbjct: 288 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQKV 346
Query: 366 APRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVT 401
+ FG G H C G LA+ E+++ + +T
Sbjct: 347 -----SHTTFGHGSHLCLGQHLARREIIVTLKEWLT 377
>pdb|2EC8|A Chain A, Crystal Structure Of The Exctracellular Domain Of The
Receptor Tyrosine Kinase, Kit
Length = 524
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 21/173 (12%)
Query: 11 IGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTY 70
+ ++ ++ +DP F + YG+ ++ CP L PE + L KP
Sbjct: 103 LSNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCP---LTDPEVTNYSLKGCQG--KP-L 156
Query: 71 PKSKEKIIGPSALF--------FHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISAL 122
PK I P A +H+ H + + +S LS + I K+ P +A+ +
Sbjct: 157 PKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPV--- 213
Query: 123 ESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNSF 175
+V + +E ++F+ I + ++ +++ + Q L + YNS+
Sbjct: 214 --VSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKL--QEKYNSW 262
>pdb|2E9W|A Chain A, Crystal Structure Of The Extracellular Domain Of Kit In
Complex With Stem Cell Factor (Scf)
pdb|2E9W|B Chain B, Crystal Structure Of The Extracellular Domain Of Kit In
Complex With Stem Cell Factor (Scf)
Length = 489
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 21/173 (12%)
Query: 11 IGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTY 70
+ ++ ++ +DP F + YG+ ++ CP L PE + L KP
Sbjct: 78 LSNSIYVFVRDPAKLFLVDRSLYGKEDSDTLVRCP---LTDPEVTSYSLKGCQG--KP-L 131
Query: 71 PKSKEKIIGPSALF--------FHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISAL 122
PK I P A +H+ H + + +S LS + I K+ P +A+ +
Sbjct: 132 PKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPV--- 188
Query: 123 ESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNSF 175
+V + +E ++F+ I + ++ +++ + Q L + YNS+
Sbjct: 189 --VSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKL--QEKYNSW 237
>pdb|1G5G|A Chain A, Fragment Of Fusion Protein From Newcastle Disease Virus
pdb|1G5G|B Chain B, Fragment Of Fusion Protein From Newcastle Disease Virus
pdb|1G5G|C Chain C, Fragment Of Fusion Protein From Newcastle Disease Virus
pdb|1G5G|D Chain D, Fragment Of Fusion Protein From Newcastle Disease Virus
pdb|1G5G|E Chain E, Fragment Of Fusion Protein From Newcastle Disease Virus
pdb|1G5G|F Chain F, Fragment Of Fusion Protein From Newcastle Disease Virus
Length = 481
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 240 IGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG 284
+GV AAQ T AS L + + +L E++ A + VHE NG
Sbjct: 96 LGVATAAQITAASALIQANQNAANILRLKESIAATNEAVHEVTNG 140
>pdb|3CQ9|A Chain A, Crystal Structure Of The Lp_1622 Protein From
Lactobacillus Plantarum. Northeast Structural Genomics
Consortium Target Lpr114
pdb|3CQ9|B Chain B, Crystal Structure Of The Lp_1622 Protein From
Lactobacillus Plantarum. Northeast Structural Genomics
Consortium Target Lpr114
pdb|3CQ9|C Chain C, Crystal Structure Of The Lp_1622 Protein From
Lactobacillus Plantarum. Northeast Structural Genomics
Consortium Target Lpr114
pdb|3CQ9|D Chain D, Crystal Structure Of The Lp_1622 Protein From
Lactobacillus Plantarum. Northeast Structural Genomics
Consortium Target Lpr114
Length = 227
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Query: 81 SALFFHQADYH----ARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFK- 135
S FF DY A R L L P + +PD + +A + + N F
Sbjct: 137 SVRFFLPGDYQITKEADKRYLAFVPLXPXHLT--LPDEKYQLDAAYNAYPISWASNEFSG 194
Query: 136 EMKKFSFDVGILSIFGNLDDSYREKLK 162
FSFD G+L++ + DDS + L+
Sbjct: 195 NTGHFSFDAGVLAVIQSRDDSXADALE 221
>pdb|2IU6|A Chain A, Regulation Of The Dha Operon Of Lactococcus Lactis
pdb|2IU6|B Chain B, Regulation Of The Dha Operon Of Lactococcus Lactis
Length = 336
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 373 VPFGLGVHACPGNELAKLE-----MLILIHHLVTEFRWEVVGSQNGI 414
V FG+G+H PG + K E + L++ L E W+ ++N I
Sbjct: 208 VSFGIGIHGEPGYRVEKFEGSERIAIELVNKLKAEINWQKKANKNYI 254
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,977,904
Number of Sequences: 62578
Number of extensions: 514067
Number of successful extensions: 1683
Number of sequences better than 100.0: 233
Number of HSP's better than 100.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 1238
Number of HSP's gapped (non-prelim): 327
length of query: 435
length of database: 14,973,337
effective HSP length: 102
effective length of query: 333
effective length of database: 8,590,381
effective search space: 2860596873
effective search space used: 2860596873
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)