Query         046128
Match_columns 435
No_of_seqs    179 out of 1945
Neff          11.2
Searched_HMMs 46136
Date          Fri Mar 29 09:01:50 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046128.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046128hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 4.5E-78 9.8E-83  555.6  40.8  430    1-434    27-488 (489)
  2 PLN02196 abscisic acid 8'-hydr 100.0 2.1E-77 4.5E-82  563.4  40.8  427    1-433    36-462 (463)
  3 PLN02774 brassinosteroid-6-oxi 100.0 4.6E-77 9.9E-82  561.7  41.2  428    1-432    32-462 (463)
  4 PLN03141 3-epi-6-deoxocathaste 100.0 7.7E-77 1.7E-81  558.9  41.8  429    1-434     8-450 (452)
  5 PLN02500 cytochrome P450 90B1  100.0 7.1E-77 1.5E-81  564.8  41.5  426    1-432    39-488 (490)
  6 PLN02302 ent-kaurenoic acid ox 100.0   8E-75 1.7E-79  553.3  43.4  433    1-434    43-488 (490)
  7 KOG0158 Cytochrome P450 CYP3/C 100.0 6.8E-75 1.5E-79  526.1  37.3  428    3-434    34-499 (499)
  8 PLN02971 tryptophan N-hydroxyl 100.0 1.2E-73 2.5E-78  547.0  41.9  428    1-433    58-533 (543)
  9 PLN02290 cytokinin trans-hydro 100.0   1E-73 2.2E-78  547.2  38.5  426    2-434    44-515 (516)
 10 PLN02183 ferulate 5-hydroxylas 100.0   1E-72 2.3E-77  538.8  41.7  427    1-433    37-511 (516)
 11 PLN02987 Cytochrome P450, fami 100.0 1.4E-72 3.1E-77  528.7  40.8  426    1-434    31-469 (472)
 12 KOG0157 Cytochrome P450 CYP4/C 100.0 2.8E-74 6.2E-79  541.7  29.2  427    1-435    36-497 (497)
 13 PTZ00404 cytochrome P450; Prov 100.0 4.1E-73 8.9E-78  538.9  36.6  424    2-433    31-482 (482)
 14 PLN02687 flavonoid 3'-monooxyg 100.0 1.6E-72 3.5E-77  537.6  40.8  429    1-434    35-509 (517)
 15 PLN00168 Cytochrome P450; Prov 100.0 2.3E-72   5E-77  536.8  41.7  431    1-434    36-517 (519)
 16 PLN00110 flavonoid 3',5'-hydro 100.0 2.4E-72 5.3E-77  533.1  40.9  429    1-434    32-497 (504)
 17 PLN03234 cytochrome P450 83B1; 100.0 2.7E-72 5.9E-77  535.6  39.9  429    1-433    29-498 (499)
 18 PF00067 p450:  Cytochrome P450 100.0 1.4E-72   3E-77  537.1  33.3  424    2-430     1-463 (463)
 19 PLN02655 ent-kaurene oxidase   100.0 2.7E-71 5.8E-76  522.9  40.9  425    2-435     1-465 (466)
 20 PLN02966 cytochrome P450 83A1  100.0 2.9E-71 6.3E-76  527.5  41.2  408    1-410    30-470 (502)
 21 PLN02394 trans-cinnamate 4-mon 100.0 6.1E-71 1.3E-75  526.8  40.6  428    1-434    31-502 (503)
 22 PLN03112 cytochrome P450 famil 100.0 1.1E-70 2.4E-75  526.0  41.6  429    1-434    33-508 (514)
 23 KOG0159 Cytochrome P450 CYP11/ 100.0 4.1E-71   9E-76  489.7  35.4  425    3-435    53-519 (519)
 24 PLN02169 fatty acid (omega-1)- 100.0 5.9E-71 1.3E-75  522.6  37.8  420    3-433    34-499 (500)
 25 PLN03018 homomethionine N-hydr 100.0 7.8E-70 1.7E-74  516.7  41.8  430    1-434    41-524 (534)
 26 PLN03195 fatty acid omega-hydr 100.0 1.9E-70 4.2E-75  524.1  36.8  430    2-434    32-516 (516)
 27 PLN02738 carotene beta-ring hy 100.0 7.9E-70 1.7E-74  522.0  39.9  415   11-435   142-596 (633)
 28 KOG0684 Cytochrome P450 [Secon 100.0 8.2E-70 1.8E-74  469.5  33.6  429    2-435    33-486 (486)
 29 PLN02936 epsilon-ring hydroxyl 100.0 3.3E-68 7.3E-73  504.0  37.3  421    4-434    16-482 (489)
 30 PLN02426 cytochrome P450, fami 100.0 4.4E-65 9.4E-70  481.7  37.3  414    8-434    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0 1.5E-63 3.2E-68  464.0  27.3  390    1-414    18-466 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 5.7E-60 1.2E-64  435.2  33.3  380   22-433    24-410 (411)
 33 PF12508 DUF3714:  Protein of u  67.2     2.5 5.5E-05   34.6   0.8   43  297-340    52-94  (200)
 34 PF08492 SRP72:  SRP72 RNA-bind  64.9     5.8 0.00012   25.1   1.9   14  359-372    44-57  (59)
 35 PF05952 ComX:  Bacillus compet  51.2      15 0.00034   23.0   2.1   19  256-274     4-22  (57)
 36 PF09201 SRX:  SRX;  InterPro:   47.5      17 0.00038   27.4   2.3   24  380-403    18-41  (148)
 37 PF12554 MOZART1:  Mitotic-spin  46.5      65  0.0014   19.5   4.4   42  234-275     6-47  (48)
 38 TIGR03779 Bac_Flav_CT_M Bacter  43.8     9.1  0.0002   35.3   0.5   44  297-341   255-298 (410)
 39 KOG3506 40S ribosomal protein   40.9      12 0.00027   22.9   0.6   10  374-383    13-22  (56)
 40 PF11227 DUF3025:  Protein of u  34.2      27 0.00058   28.9   1.7   22  341-362   190-211 (212)
 41 PF12444 Sox_N:  Sox developmen  31.8      37 0.00081   23.4   1.8   22  390-411    60-81  (84)
 42 PF14483 Cut8_M:  Cut8 dimerisa  31.7      75  0.0016   18.1   2.7   12  262-273    24-35  (38)
 43 PF13993 YccJ:  YccJ-like prote  31.0      85  0.0018   19.9   3.0   31  244-274     8-39  (69)
 44 KOG3262 H/ACA small nucleolar   30.9      28 0.00061   27.7   1.3   35  330-366   106-141 (215)
 45 PHA03162 hypothetical protein;  30.2      33 0.00072   25.6   1.4   24  376-399     2-25  (135)
 46 PRK06789 flagellar motor switc  28.6      52  0.0011   22.1   2.0   40  303-342    21-63  (74)
 47 PF07886 BA14K:  BA14K-like pro  27.3      57  0.0012   17.6   1.7   16  368-383    16-31  (31)
 48 PF02663 FmdE:  FmdE, Molybdenu  27.0      47   0.001   25.2   1.9   23  379-401     4-26  (131)
 49 PF14129 DUF4296:  Domain of un  25.9 2.3E+02   0.005   19.6   6.3   50  230-279    29-78  (87)
 50 COG4471 Uncharacterized protei  25.3   2E+02  0.0043   20.0   4.3   36   27-62     19-54  (90)
 51 PRK10174 hypothetical protein;  25.3 1.3E+02  0.0028   19.4   3.2   31  244-274    14-45  (75)
 52 PF09926 DUF2158:  Uncharacteri  24.9      73  0.0016   19.7   2.1   18   33-50      3-20  (53)
 53 PF13625 Helicase_C_3:  Helicas  24.0 1.6E+02  0.0036   22.2   4.4   39   23-63     77-115 (129)
 54 COG2101 SPT15 TATA-box binding  23.4      23 0.00051   28.0  -0.3   31  357-387    36-71  (185)
 55 PRK02302 hypothetical protein;  22.6 2.4E+02  0.0052   19.8   4.4   35   27-61     20-54  (89)
 56 COG1965 CyaY Protein implicate  21.7 1.3E+02  0.0028   21.9   3.0   29   34-62     36-64  (106)
 57 PF07849 DUF1641:  Protein of u  20.8 1.2E+02  0.0026   17.6   2.3   19  255-273    13-31  (42)
 58 PRK02886 hypothetical protein;  20.5 2.8E+02  0.0062   19.3   4.4   35   27-61     18-52  (87)
 59 PF13893 RRM_5:  RNA recognitio  20.2 2.2E+02  0.0047   17.3   4.3   34   27-60      2-39  (56)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.5e-78  Score=555.59  Aligned_cols=430  Identities=25%  Similarity=0.364  Sum_probs=351.3

Q ss_pred             CCCCCCCccccccccccccCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCcc--cccccc
Q 046128            1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPK--SKEKII   78 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~--~~~~~~   78 (435)
                      |||||+++|+|||++++....+|+.+.+|.++|||||.+++|..++|||+|++.++|++.+++..|++++..  ....+.
T Consensus        27 lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~~~  106 (489)
T KOG0156|consen   27 LPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKYLS  106 (489)
T ss_pred             CCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHHhc
Confidence            799999999999999985334999999999999999999999999999999999999999999999998752  224444


Q ss_pred             -cCCccccc-cchHHHHHHHHHHhc-CCHHHHhhhhHHHHHHHHHHHHHhhc--C-CccchHHHHHHHHHHHHHHHhhcC
Q 046128           79 -GPSALFFH-QADYHARLRKLVQSS-LSPERIKKLIPDIEAIAISALESCAV--G-QVINTFKEMKKFSFDVGILSIFGN  152 (435)
Q Consensus        79 -g~~~~~~~-~g~~~~~~R~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~--~-~~~d~~~~~~~~~~~~~~~~~fG~  152 (435)
                       |..++.++ +|+.|+.+||+.... ++...+++....-.+.++++++.+..  + .++|+...+..++.+++++.+||.
T Consensus       107 ~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~fG~  186 (489)
T KOG0156|consen  107 YGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRMLFGR  186 (489)
T ss_pred             CCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHHhCC
Confidence             45677776 899999999998764 67777777666667778887877763  2 689999999999999999999999


Q ss_pred             CChH----HHHHHHHHHHHHHhcccc------cc---ccCCcc--hHHHHHHHHHHHHHHHHHHHHHHHhhc--ccccch
Q 046128          153 LDDS----YREKLKQNYLIVDKGYNS------FP---SNIPGT--AYHKALLARKRLSQIVSEIICERKEKR--LLEKDL  215 (435)
Q Consensus       153 ~~~~----~~~~~~~~~~~~~~~~~~------~~---~~~p~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~  215 (435)
                      +...    ...++.............      +|   .+++..  ..++......++..++++.|++++++.  +++.|+
T Consensus       187 rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~~~~~~D~  266 (489)
T KOG0156|consen  187 RFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIGDEEGRDF  266 (489)
T ss_pred             ccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcH
Confidence            7653    222344444433332221      22   123311  223344444558888888888876642  223799


Q ss_pred             HHHhhcccccCCCC-CCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHhh
Q 046128          216 LGCLLNSRDEKGRT-LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQT  294 (435)
Q Consensus       216 l~~ll~~~~~~~~~-l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~l  294 (435)
                      ++.+++..+++... ++++++...+..+++||+|||++|+.|++.+|++||++|+|+++||+++++.    ++.++.+|+
T Consensus       267 vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~----~r~v~e~D~  342 (489)
T KOG0156|consen  267 VDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGK----GRLVSESDL  342 (489)
T ss_pred             HHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC----CCCCChhhh
Confidence            99999986543333 9999999999999999999999999999999999999999999999999863    444999999


Q ss_pred             hcCchhHHHHHHhhccccCcccc-eeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCCC----CC
Q 046128          295 KNMRCTYRFILESMRMASIISFT-FREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAP----RP  369 (435)
Q Consensus       295 ~~~p~l~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~----~~  369 (435)
                      .+||||+|+|+|++|++|++|.. +|.+++|+.++||.|||||.|+++.+++||||++|+||++|+||||++..    ..
T Consensus       343 ~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~d~~~~~  422 (489)
T KOG0156|consen  343 PKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSNDGKGLD  422 (489)
T ss_pred             ccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCccccCCc
Confidence            99999999999999999999975 69999999999999999999999999999999999999999999999963    56


Q ss_pred             CCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccCCccc-CCccCCCCCCceEEEecC
Q 046128          370 NTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNGIQY-GPFPVPEKGLPARFWRVP  434 (435)
Q Consensus       370 ~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~r~  434 (435)
                      ..++|||.|+|.|||..+|++++.++++.|+++|+|++.+++.+... ......+.++.+...+|.
T Consensus       423 ~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~~~d~~e~~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  423 FKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGGKVDMEEAGLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             eEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCCCCCCcccccceecCCcceeeeecCC
Confidence            78999999999999999999999999999999999999976212211 244555656776666653


No 2  
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=2.1e-77  Score=563.45  Aligned_cols=427  Identities=61%  Similarity=1.115  Sum_probs=369.8

Q ss_pred             CCCCCCCccccccccccccCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCcccccccccC
Q 046128            1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKSKEKIIGP   80 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~~~~~~~g~   80 (435)
                      +||||+++|++||++++...+++.++.+++++||++|++++++.++|+++||+.+++++.++...|...+.......+|.
T Consensus        36 ~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~~~~~~~g~  115 (463)
T PLN02196         36 LPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASKERMLGK  115 (463)
T ss_pred             CCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcccccCchHHHHHcCc
Confidence            59999999999999887567899999999999999999999999999999999999999887766654333333345565


Q ss_pred             CccccccchHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcCCChHHHHH
Q 046128           81 SALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREK  160 (435)
Q Consensus        81 ~~~~~~~g~~~~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~fG~~~~~~~~~  160 (435)
                      .+++..+|+.|+++|+++.+.|++++++.+.+.+.+.+.++++.|. ++.+|+.+++..+++++++.++||.+.......
T Consensus       116 ~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~~~~~~~-~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~~~~  194 (463)
T PLN02196        116 QAIFFHQGDYHAKLRKLVLRAFMPDAIRNMVPDIESIAQESLNSWE-GTQINTYQEMKTYTFNVALLSIFGKDEVLYRED  194 (463)
T ss_pred             ccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHcCC-CCeEEeHHHHHHHHHHHHHHHHcCCCCchHHHH
Confidence            5788889999999999999999999999999999999999999985 457899999999999999999999865433334


Q ss_pred             HHHHHHHHHhccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHhhcccccCCCCCCHHHHHHHHH
Q 046128          161 LKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICERKEKRLLEKDLLGCLLNSRDEKGRTLTEDQIADNII  240 (435)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ll~~~~~~~~~l~~~~l~~~~~  240 (435)
                      +...+..+...+..++..+|....++..++.+.+.+++.+.+.++++......|+++.++...    ..++++++..++.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~~~~~d~l~~ll~~~----~~l~~~ei~~~~~  270 (463)
T PLN02196        195 LKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKILSKRRQNGSSHNDLLGSFMGDK----EGLTDEQIADNII  270 (463)
T ss_pred             HHHHHHHHhcchhcccccCCCccchHHHHHHHHHHHHHHHHHHHHhhcCCCcccHHHHHHhcC----CCCCHHHHHHHHH
Confidence            444444444444444555665545677788899999999999888766555678999988632    3489999999999


Q ss_pred             HHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHhhhcCchhHHHHHHhhccccCcccceee
Q 046128          241 GVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFRE  320 (435)
Q Consensus       241 ~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~l~~~p~l~a~i~E~lRl~p~~~~~~r~  320 (435)
                      ++++||+|||+++++|++++|++||++|+|+++|++++.+.. +.+..+++++++++|||+|+|+|+||++|++++..|.
T Consensus       271 ~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~-~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~  349 (463)
T PLN02196        271 GVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDK-EEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFRE  349 (463)
T ss_pred             HHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccc-ccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccccee
Confidence            999999999999999999999999999999999999887532 1345689999999999999999999999999988899


Q ss_pred             eeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCccccCCCccCCCChHHHHHHHHHHHHHHH
Q 046128          321 AVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLV  400 (435)
Q Consensus       321 ~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll  400 (435)
                      +.+|+.++||.|||||.|+++.+++||||++|+||++|+||||++...+..++|||.|+|.|+|+++|++|++++++.|+
T Consensus       350 ~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll  429 (463)
T PLN02196        350 AVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAPKPNTFMPFGNGTHSCPGNELAKLEISVLIHHLT  429 (463)
T ss_pred             eccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCCCCCcccCcCCCCCCCchHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999876778999999999999999999999999999999


Q ss_pred             hcCeeEEcCccCCcccCCccCCCCCCceEEEec
Q 046128          401 TEFRWEVVGSQNGIQYGPFPVPEKGLPARFWRV  433 (435)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  433 (435)
                      ++|+|++.+++....+.++..|+++++|++++.
T Consensus       430 ~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        430 TKYRWSIVGTSNGIQYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             HhcEEEEcCCCCceEEcccccCCCCceEEEecC
Confidence            999999988766667777889999999999875


No 3  
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=4.6e-77  Score=561.65  Aligned_cols=428  Identities=31%  Similarity=0.589  Sum_probs=362.9

Q ss_pred             CCCCCCCccccccccccccCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCcccccccccC
Q 046128            1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKSKEKIIGP   80 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~~~~~~~g~   80 (435)
                      +||||+++|++||++.+. +++..++.+++++||++|++++++.++++++||+.+++++.++...|..+.......++|.
T Consensus        32 ~ppgp~~~P~~G~~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~lg~  110 (463)
T PLN02774         32 LPPGTMGWPLFGETTEFL-KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDILGT  110 (463)
T ss_pred             CCCCCCCCCchhhHHHHH-HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHHhCc
Confidence            589999999999998874 6788899999999999999999999999999999999999877766644443333345665


Q ss_pred             CccccccchHHHHHHHHHHhcCCHHHHhh-hhHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcCCChHHHH
Q 046128           81 SALFFHQADYHARLRKLVQSSLSPERIKK-LIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYRE  159 (435)
Q Consensus        81 ~~~~~~~g~~~~~~R~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~fG~~~~~~~~  159 (435)
                      .+++..+|+.|+.+|+++.+.|++..++. +.+.+.+.+.++++.|..++++|+.+.+..+++++++.++||........
T Consensus       111 ~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~  190 (463)
T PLN02774        111 CNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDGLKTIDIQEKTKEMALLSALKQIAGTLSKPISE  190 (463)
T ss_pred             cchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEeeHHHHHHHHHHHHHHHcCCCChHHHH
Confidence            56777899999999999999999998876 78999999999999987667899999999999999999999986544334


Q ss_pred             HHHHHHHHHHhccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHhhcccccCCCCCCHHHHHHHH
Q 046128          160 KLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICERKEKRLLEKDLLGCLLNSRDEKGRTLTEDQIADNI  239 (435)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ll~~~~~~~~~l~~~~l~~~~  239 (435)
                      .+...+..+......++.++|...+++..++.+.+.+.+.+.++++++.....+|+++.+++... ++..++++++..++
T Consensus       191 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~d~l~~ll~~~~-~~~~~s~~ei~~~~  269 (463)
T PLN02774        191 EFKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLIQERRASGETHTDMLGYLMRKEG-NRYKLTDEEIIDQI  269 (463)
T ss_pred             HHHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHhCcc-CCCCCCHHHHHHHH
Confidence            44444444443333445556766567777889999999999998887665455799999987432 23358999999999


Q ss_pred             HHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHhhhcCchhHHHHHHhhccccCccccee
Q 046128          240 IGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFR  319 (435)
Q Consensus       240 ~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~l~~~p~l~a~i~E~lRl~p~~~~~~r  319 (435)
                      .++++||+|||+++++|++++|++||++|+|+++|++.+.+... ++..++++++++||||+|+|+|+||++|+++.+.|
T Consensus       270 ~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~-~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R  348 (463)
T PLN02774        270 ITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKR-PEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLR  348 (463)
T ss_pred             HHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccC-CCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCccc
Confidence            99999999999999999999999999999999999999875321 23568999999999999999999999999998889


Q ss_pred             eeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCCC--CCCCccccCCCccCCCChHHHHHHHHHHHH
Q 046128          320 EAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAP--RPNTFVPFGLGVHACPGNELAKLEMLILIH  397 (435)
Q Consensus       320 ~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~--~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~  397 (435)
                      .+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++..  ....++|||+|+|.|||+++|++|++++++
T Consensus       349 ~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la  428 (463)
T PLN02774        349 KTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLESHNYFFLFGGGTRLCPGKELGIVEISTFLH  428 (463)
T ss_pred             ccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcCCCccccCcCCCCCcCCcHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999753  234699999999999999999999999999


Q ss_pred             HHHhcCeeEEcCccCCcccCCccCCCCCCceEEEe
Q 046128          398 HLVTEFRWEVVGSQNGIQYGPFPVPEKGLPARFWR  432 (435)
Q Consensus       398 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  432 (435)
                      .|+++|+|++.++... ...++..|+++++|++++
T Consensus       429 ~Ll~~f~~~~~~~~~~-~~~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        429 YFVTRYRWEEVGGDKL-MKFPRVEAPNGLHIRVSP  462 (463)
T ss_pred             HHHHhceEEECCCCcc-ccCCCCCCCCCceEEeee
Confidence            9999999999876543 334566789999999875


No 4  
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=7.7e-77  Score=558.89  Aligned_cols=429  Identities=33%  Similarity=0.584  Sum_probs=364.4

Q ss_pred             CCCCCCCccccccccccc----cCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCcccccc
Q 046128            1 LPPGSMGWPFIGETLQIY----SQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKSKEK   76 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~----~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~~~~~   76 (435)
                      +||||+++|++||++.+.    ..+++.++.+++++||+||++++|+.++|+++||+++++++.++...|+.++......
T Consensus         8 ~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~~~~~   87 (452)
T PLN03141          8 LPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPKSLTE   87 (452)
T ss_pred             CCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCchhHHH
Confidence            699999999999998873    2468899999999999999999999999999999999999998877776654444455


Q ss_pred             cccCCccccccchHHHHHHHHHHhcCCHHHHhh-hhHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcCCCh
Q 046128           77 IIGPSALFFHQADYHARLRKLVQSSLSPERIKK-LIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDD  155 (435)
Q Consensus        77 ~~g~~~~~~~~g~~~~~~R~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~fG~~~~  155 (435)
                      ++|..+++..+|+.|+++|+++.+.|+...+.. +.+.+.+.+.++++.|..++.+|+.+.+..+++++++.++||....
T Consensus        88 l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~G~~~~  167 (452)
T PLN03141         88 LMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWRDDPPVLVQDETKKIAFEVLVKALISLEPG  167 (452)
T ss_pred             HhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhccCCCCEEhHHHHHHHHHHHHHHHHcCCCch
Confidence            677556888899999999999999998877766 4677788888888887666789999999999999999999998655


Q ss_pred             HHHHHHHHHHHHHHhccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcc--------cccchHHHhhcccccCC
Q 046128          156 SYREKLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICERKEKRL--------LEKDLLGCLLNSRDEKG  227 (435)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~~~~~l~~ll~~~~~~~  227 (435)
                      .....+...+..+......++.++|...+.+..++.+++.+++.+.+++++++..        ...|+++.++...+   
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~---  244 (452)
T PLN03141        168 EEMEFLKKEFQEFIKGLMSLPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLRDGS---  244 (452)
T ss_pred             HHHHHHHHHHHHHhhhHHhCccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHhcCC---
Confidence            4444455555544444444555566665666777889999999999988775421        13589998887542   


Q ss_pred             CCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHhhhcCchhHHHHHHh
Q 046128          228 RTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILES  307 (435)
Q Consensus       228 ~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~l~~~p~l~a~i~E~  307 (435)
                      ..+++++++.++..+++||+|||+++++|++++|++||++|+++++|+.++.......+..++.+++.+||||+|||+|+
T Consensus       245 ~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~  324 (452)
T PLN03141        245 DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITET  324 (452)
T ss_pred             CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHH
Confidence            35899999999999999999999999999999999999999999999998865322234568999999999999999999


Q ss_pred             hccccCcccceeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCC-CCCCCccccCCCccCCCChH
Q 046128          308 MRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA-PRPNTFVPFGLGVHACPGNE  386 (435)
Q Consensus       308 lRl~p~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~-~~~~~~~~Fg~G~r~C~G~~  386 (435)
                      ||++|++++++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++. ..+..|+|||+|+|.|+|++
T Consensus       325 lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~pFG~G~R~C~G~~  404 (452)
T PLN03141        325 LRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDMNNSSFTPFGGGQRLCPGLD  404 (452)
T ss_pred             HhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCCCCCCCCCCCCCCCCCChHH
Confidence            99999998888999999999999999999999999999999999999999999999975 34568999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCeeEEcCccCCcccCCccCCCCCCceEEEecC
Q 046128          387 LAKLEMLILIHHLVTEFRWEVVGSQNGIQYGPFPVPEKGLPARFWRVP  434 (435)
Q Consensus       387 la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  434 (435)
                      ||++|++++++.|+++|+|++.++..  ...++.+|.+++.|++++|+
T Consensus       405 lA~~el~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  450 (452)
T PLN03141        405 LARLEASIFLHHLVTRFRWVAEEDTI--VNFPTVRMKRKLPIWVTRID  450 (452)
T ss_pred             HHHHHHHHHHHHHHhcCeeecCCCCe--eecccccCCCCceEEEEeCC
Confidence            99999999999999999999876542  22467899999999999996


No 5  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=7.1e-77  Score=564.85  Aligned_cols=426  Identities=34%  Similarity=0.655  Sum_probs=351.2

Q ss_pred             CCCCCCCcccccccccccc----CCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCcccccc
Q 046128            1 LPPGSMGWPFIGETLQIYS----QDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKSKEK   76 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~~----~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~~~~~   76 (435)
                      +||||+++|++||++.+..    ..++.++.+++++||++|++++|+.++|+++||+++++++.+++..|+.+++.....
T Consensus        39 ~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~~~~  118 (490)
T PLN02500         39 LPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSIGG  118 (490)
T ss_pred             CCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchHHHH
Confidence            6999999999999876532    346678999999999999999999999999999999999998877676554433334


Q ss_pred             cccCCccccccchHHHHHHHHHHhcCCHHHHhh-hhHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcCCCh
Q 046128           77 IIGPSALFFHQADYHARLRKLVQSSLSPERIKK-LIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDD  155 (435)
Q Consensus        77 ~~g~~~~~~~~g~~~~~~R~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~fG~~~~  155 (435)
                      ++|..+++..+|+.|+++|+++.+.|++.+++. +.+.+.+.+.++++.|..++.+|+.+.+..++++++++++||.+.+
T Consensus       119 ~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fg~~~~  198 (490)
T PLN02500        119 ILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKENSTFSAQDEAKKFTFNLMAKHIMSMDPG  198 (490)
T ss_pred             HhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCCCCEEehHHHHHHHHHHHHHHHhCCCCC
Confidence            456446777899999999999999999999887 5678888888888888766789999999999999999999998643


Q ss_pred             H-HHHHHHHHHHHHHhccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHhh---c---ccccchHHHhhcccccCCC
Q 046128          156 S-YREKLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICERKEK---R---LLEKDLLGCLLNSRDEKGR  228 (435)
Q Consensus       156 ~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~---~~~~~~l~~ll~~~~~~~~  228 (435)
                      . ....+...+..+.......+..+|...+++..++.+.+.+++.+.++++++.   .   ....|+++.+++..     
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~-----  273 (490)
T PLN02500        199 EEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKHS-----  273 (490)
T ss_pred             chHHHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhcc-----
Confidence            2 2223333333332222222334555445666777888888888888876542   1   12468999998742     


Q ss_pred             CCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcC-CCCCCCCHHhhhcCchhHHHHHHh
Q 046128          229 TLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNN-GGQRALTWAQTKNMRCTYRFILES  307 (435)
Q Consensus       229 ~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~-~~~~~~~~~~l~~~p~l~a~i~E~  307 (435)
                      .++++++++++.++++||+|||+++++|++++|++||++|+|+++|++++.+... .++..++++++.+|||++|||+|+
T Consensus       274 ~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEt  353 (490)
T PLN02500        274 NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINET  353 (490)
T ss_pred             CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHH
Confidence            3899999999999999999999999999999999999999999999999864311 123458999999999999999999


Q ss_pred             hccccCcccceeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCCC-----------CCCCccccC
Q 046128          308 MRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAP-----------RPNTFVPFG  376 (435)
Q Consensus       308 lRl~p~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~-----------~~~~~~~Fg  376 (435)
                      ||++|+++.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++.           .+..|+|||
T Consensus       354 lRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG  433 (490)
T PLN02500        354 LRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFG  433 (490)
T ss_pred             HhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCC
Confidence            999999998889999999999999999999999999999999999999999999999642           246899999


Q ss_pred             CCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccCCcccCCccCCCCCCceEEEe
Q 046128          377 LGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNGIQYGPFPVPEKGLPARFWR  432 (435)
Q Consensus       377 ~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  432 (435)
                      +|+|.|+|+++|++|++++++.|+++|+|++.++...... +.+.++++++|++++
T Consensus       434 ~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~~-~~~~~~~~l~~~~~~  488 (490)
T PLN02500        434 GGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFAF-PFVDFPKGLPIRVRR  488 (490)
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcceec-ccccCCCCceEEEEe
Confidence            9999999999999999999999999999999877544433 355667899999886


No 6  
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=8e-75  Score=553.32  Aligned_cols=433  Identities=36%  Similarity=0.672  Sum_probs=363.8

Q ss_pred             CCCCCCCccccccccccc----cCCchHHHHHHHHHhCC--ceEeeecCccEEEEeChHHHHHHHhhccccccccCcccc
Q 046128            1 LPPGSMGWPFIGETLQIY----SQDPNVFFATKQKRYGE--IFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKSK   74 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~----~~~~~~~~~~~~~~yG~--v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~~~   74 (435)
                      +||||+++|++|+++++.    ..+++.++.+++++||+  +|++++++.++|+++||+.+++|+.+++ .|.++++...
T Consensus        43 lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~~~~~~~  121 (490)
T PLN02302         43 LPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEPGWPEST  121 (490)
T ss_pred             CcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccccCCchhH
Confidence            699999999999998764    24688999999999997  7999999999999999999999998764 3555444322


Q ss_pred             cccccCCccccccchHHHHHHHHHHhcCC-HHHHhhhhHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcCC
Q 046128           75 EKIIGPSALFFHQADYHARLRKLVQSSLS-PERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNL  153 (435)
Q Consensus        75 ~~~~g~~~~~~~~g~~~~~~R~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~fG~~  153 (435)
                      ...+|..++...+|+.|+++|+.+.+.|+ ++.++.+.+.+.+.+.++++.+..++.+|+.+++..+++++++.++||.+
T Consensus       122 ~~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~~~~v~~~~~~~~~~~~vi~~~~~G~~  201 (490)
T PLN02302        122 VELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSKMGEIEFLTELRKLTFKIIMYIFLSSE  201 (490)
T ss_pred             HHHhccccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCEehHHHHHHHHHHHHHHHHcCCC
Confidence            23456455666899999999999999995 78899999999999999999987777899999999999999999999987


Q ss_pred             ChHHHHHHHHHHHHHHhccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHhhc-----ccccchHHHhhcccccCCC
Q 046128          154 DDSYREKLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICERKEKR-----LLEKDLLGCLLNSRDEKGR  228 (435)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~l~~ll~~~~~~~~  228 (435)
                      .......+...+..+...+..++..+|...+.+..++.+.+.+++.+.++++++..     ....|+++.+++..++++.
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~  281 (490)
T PLN02302        202 SELVMEALEREYTTLNYGVRAMAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLLLDAEDENGR  281 (490)
T ss_pred             ChHHHHHHHHHHHHHHHHhhhCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHHHhhhccCCC
Confidence            65444444333333333322333345554456667778888899988888876542     1357999999987555455


Q ss_pred             CCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHhhhcCchhHHHHHHhh
Q 046128          229 TLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESM  308 (435)
Q Consensus       229 ~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~l~~~p~l~a~i~E~l  308 (435)
                      .+++++++.++..+++||+|||+++++|++++|++||++|+|+++|++++.+........++++++++||||+|+|+|+|
T Consensus       282 ~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~l  361 (490)
T PLN02302        282 KLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETL  361 (490)
T ss_pred             CCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999998754221123379999999999999999999


Q ss_pred             ccccCcccceeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCC-CCCCCccccCCCccCCCChHH
Q 046128          309 RMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA-PRPNTFVPFGLGVHACPGNEL  387 (435)
Q Consensus       309 Rl~p~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~-~~~~~~~~Fg~G~r~C~G~~l  387 (435)
                      |++|+++...|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++. ..+..++|||+|+|.|+|++|
T Consensus       362 Rl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~~~~~~~~pFG~G~r~C~G~~l  441 (490)
T PLN02302        362 RLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYTPKAGTFLPFGLGSRLCPGNDL  441 (490)
T ss_pred             HhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCCCCCCCccCCCCCCcCCCcHHH
Confidence            9999999888999999999999999999999999999999999999999999999975 345689999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCeeEEcCccCCcccCCccCCCCCCceEEEecC
Q 046128          388 AKLEMLILIHHLVTEFRWEVVGSQNGIQYGPFPVPEKGLPARFWRVP  434 (435)
Q Consensus       388 a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  434 (435)
                      |.+|++++++.|+++|+|++.++.....+.+...|.+++.+++++|.
T Consensus       442 A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  488 (490)
T PLN02302        442 AKLEISIFLHHFLLGYRLERLNPGCKVMYLPHPRPKDNCLARITKVA  488 (490)
T ss_pred             HHHHHHHHHHHHHhcCeeEEcCCCCcceeCCCCCCCCCceEEEEecc
Confidence            99999999999999999999876555566677999999999999885


No 7  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.8e-75  Score=526.11  Aligned_cols=428  Identities=24%  Similarity=0.363  Sum_probs=344.6

Q ss_pred             CCCCCccccccccccccC-CchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhcccccccc--Ccccccc-cc
Q 046128            3 PGSMGWPFIGETLQIYSQ-DPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPT--YPKSKEK-II   78 (435)
Q Consensus         3 Pgp~~~p~lG~~~~~~~~-~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~--~~~~~~~-~~   78 (435)
                      |+|+++|++||+..+... .+..+..+...++|+++.++.+..+.++|+|||.+++|+.+....|.++  ....... -+
T Consensus        34 ~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~~l  113 (499)
T KOG0158|consen   34 PGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPEDPL  113 (499)
T ss_pred             CCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCCcc
Confidence            788889999999987542 3455555555555999999999999999999999999999887778773  2211111 22


Q ss_pred             cCCccccccchHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhhcC----CccchHHHHHHHHHHHHHHHhhcCCC
Q 046128           79 GPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAVG----QVINTFKEMKKFSFDVGILSIFGNLD  154 (435)
Q Consensus        79 g~~~~~~~~g~~~~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~d~~~~~~~~~~~~~~~~~fG~~~  154 (435)
                      +..+++..+|+.|+++|..++|.|++.+++.+.+.+++.++++++.+.+.    ..+++.+.+.+++.|+++++.||...
T Consensus       114 ~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~AfG~~~  193 (499)
T KOG0158|consen  114 SALNLFFLRGERWKRLRTKLSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCAFGLDA  193 (499)
T ss_pred             cccCchhccCchHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhhcccch
Confidence            33678889999999999999999999999999999999999999988652    27889999999999999999999965


Q ss_pred             hHHHH---HHHHHHHHHHhc-cccccc------cCCcc-----hHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHh
Q 046128          155 DSYRE---KLKQNYLIVDKG-YNSFPS------NIPGT-----AYHKALLARKRLSQIVSEIICERKEKRLLEKDLLGCL  219 (435)
Q Consensus       155 ~~~~~---~~~~~~~~~~~~-~~~~~~------~~p~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~l  219 (435)
                      ++..+   .+.......... ....+.      .+|..     .........+.+.+.+.+.++.|..+....+|+++.+
T Consensus       194 ~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~~~v~~R~~~~~~r~Dfi~ll  273 (499)
T KOG0158|consen  194 NSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVNSRVEQREKENIERNDFIDLL  273 (499)
T ss_pred             hhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHH
Confidence            54321   111111111111 000000      01110     0111234556677777777887755566678999999


Q ss_pred             hccccc--C---CC-CCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHh
Q 046128          220 LNSRDE--K---GR-TLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQ  293 (435)
Q Consensus       220 l~~~~~--~---~~-~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~  293 (435)
                      ++....  .   .. .+|.++++++++.+++||.|||+++++.++|+|++|||+|+|||+||+++...    ...+++|.
T Consensus       274 l~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~----~~~ltyd~  349 (499)
T KOG0158|consen  274 LDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEE----KEGLTYDS  349 (499)
T ss_pred             HHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcc----cCCCCHHH
Confidence            987642  1   11 49999999999999999999999999999999999999999999999999643    22299999


Q ss_pred             hhcCchhHHHHHHhhccccCcccceeeeecccccc-CEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCC----CC
Q 046128          294 TKNMRCTYRFILESMRMASIISFTFREAVCDVEYK-GFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA----PR  368 (435)
Q Consensus       294 l~~~p~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~----~~  368 (435)
                      +.+|+||++||+||||+||+++.+-|.+++|++++ ++.||||+.|+++.+++||||++||||++|+||||.+.    ..
T Consensus       350 l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~~~~  429 (499)
T KOG0158|consen  350 LSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNKSRH  429 (499)
T ss_pred             HhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCcccccC
Confidence            99999999999999999999999889999999999 99999999999999999999999999999999999975    36


Q ss_pred             CCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCcc-CCccc---CCccCCCCCCceEEEecC
Q 046128          369 PNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQ-NGIQY---GPFPVPEKGLPARFWRVP  434 (435)
Q Consensus       369 ~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~-~~~~~---~~~~~~~~~~~v~~~~r~  434 (435)
                      +..|+|||.|||+|+|++||.+|+|+.|++||++|+++..+.. .....   +.++.|++++.+++++|+
T Consensus       430 ~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  430 PGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             CccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCccceeeecCCceEEEEEeCC
Confidence            7799999999999999999999999999999999999988731 11233   457899999999999985


No 8  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.2e-73  Score=547.02  Aligned_cols=428  Identities=18%  Similarity=0.275  Sum_probs=335.8

Q ss_pred             CCCCCCCccccccccccccCCc-hHHHHHHHHHhC-CceEeeecCccEEEEeChHHHHHHHhhccccccccCcccccccc
Q 046128            1 LPPGSMGWPFIGETLQIYSQDP-NVFFATKQKRYG-EIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKSKEKII   78 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~~~~~-~~~~~~~~~~yG-~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~~~~~~~   78 (435)
                      +||||+++|++||++++...++ +.++.+|.++|| +||++++|+.++|+++||+.+++++.++...|.++........+
T Consensus        58 lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~~l  137 (543)
T PLN02971         58 LPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQKIL  137 (543)
T ss_pred             CCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchhhc
Confidence            6999999999999988753333 678999999999 89999999999999999999999999888778777543333444


Q ss_pred             cCC---ccccccchHHHHHHHHHHhc-CCHHHHhhhhHHHHHHHHHHHHHhh----cCCccchHHHHHHHHHHHHHHHhh
Q 046128           79 GPS---ALFFHQADYHARLRKLVQSS-LSPERIKKLIPDIEAIAISALESCA----VGQVINTFKEMKKFSFDVGILSIF  150 (435)
Q Consensus        79 g~~---~~~~~~g~~~~~~R~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~d~~~~~~~~~~~~~~~~~f  150 (435)
                      |..   +++..+|+.|+++|+++.+. +++.....+.+.+++.++.+++.+.    .++++|+.+.+.++++++++.++|
T Consensus       138 ~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~f  217 (543)
T PLN02971        138 SNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKRLMF  217 (543)
T ss_pred             cCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHHHHh
Confidence            422   36778899999999999754 5555566677777777777766642    346799999999999999999999


Q ss_pred             cCCChH---------HH---HHHHHHHHHHHhccc-cccccCCcc------h-HHHHHHHHHHHHHHHHHHHHHHHhh--
Q 046128          151 GNLDDS---------YR---EKLKQNYLIVDKGYN-SFPSNIPGT------A-YHKALLARKRLSQIVSEIICERKEK--  208 (435)
Q Consensus       151 G~~~~~---------~~---~~~~~~~~~~~~~~~-~~~~~~p~~------~-~~~~~~~~~~~~~~~~~~i~~~~~~--  208 (435)
                      |.+...         ..   ..+...+........ .+..++|..      . .+...++.+.+.+++.+.++++++.  
T Consensus       218 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  297 (543)
T PLN02971        218 GTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKMWR  297 (543)
T ss_pred             CCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            985311         01   111111111111111 111112211      1 1233445666777788888776542  


Q ss_pred             -c--ccccchHHHhhcccccCCC-CCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCC
Q 046128          209 -R--LLEKDLLGCLLNSRDEKGR-TLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG  284 (435)
Q Consensus       209 -~--~~~~~~l~~ll~~~~~~~~-~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~  284 (435)
                       .  ....|+++.+++..++++. .++++++..++.++++||+|||+++++|++++|+.||++|+|+++|++++++    
T Consensus       298 ~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g----  373 (543)
T PLN02971        298 EGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVG----  373 (543)
T ss_pred             ccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC----
Confidence             1  1236999999986543332 4999999999999999999999999999999999999999999999999975    


Q ss_pred             CCCCCCHHhhhcCchhHHHHHHhhccccCccc-ceeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCC
Q 046128          285 GQRALTWAQTKNMRCTYRFILESMRMASIISF-TFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRF  363 (435)
Q Consensus       285 ~~~~~~~~~l~~~p~l~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~  363 (435)
                      .++.++++++.+|||++|||+|+||++|+++. ++|.+.+|+.++||.|||||.|+++.+++||||++|+||++|+||||
T Consensus       374 ~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRf  453 (543)
T PLN02971        374 KERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERH  453 (543)
T ss_pred             CCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccC
Confidence            34678999999999999999999999999997 56999999999999999999999999999999999999999999999


Q ss_pred             CCCC-------CCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccCCcc----cCCccCCCCCCceEEEe
Q 046128          364 KVAP-------RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNGIQ----YGPFPVPEKGLPARFWR  432 (435)
Q Consensus       364 l~~~-------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~----~~~~~~~~~~~~v~~~~  432 (435)
                      +++.       .+..|+|||+|+|.|+|++||++|++++++.|+++|+|++.++.....    ++ ...-++++.+.+++
T Consensus       454 l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  532 (543)
T PLN02971        454 LNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPLVMVGEL  532 (543)
T ss_pred             CCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccceeeeee
Confidence            9642       245799999999999999999999999999999999999886542222    23 33245578888888


Q ss_pred             c
Q 046128          433 V  433 (435)
Q Consensus       433 r  433 (435)
                      |
T Consensus       533 ~  533 (543)
T PLN02971        533 R  533 (543)
T ss_pred             c
Confidence            7


No 9  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1e-73  Score=547.16  Aligned_cols=426  Identities=21%  Similarity=0.301  Sum_probs=343.4

Q ss_pred             CCCCCCcccccccccccc------------------CCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhcc
Q 046128            2 PPGSMGWPFIGETLQIYS------------------QDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHA   63 (435)
Q Consensus         2 PPgp~~~p~lG~~~~~~~------------------~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~   63 (435)
                      ||||+++|++||++++..                  .+....+.+|+++||++|++++|+.++|+++|++.+++++.++.
T Consensus        44 ~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~~~  123 (516)
T PLN02290         44 VRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLTKYN  123 (516)
T ss_pred             CCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHhcCC
Confidence            899999999999987631                  12233578899999999999999999999999999999998774


Q ss_pred             ccccccCc-c--cccccccCCccccccchHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhhc----C-CccchHH
Q 046128           64 HFFKPTYP-K--SKEKIIGPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAV----G-QVINTFK  135 (435)
Q Consensus        64 ~~~~~~~~-~--~~~~~~g~~~~~~~~g~~~~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~-~~~d~~~  135 (435)
                      . +..+.. .  .....+| .++++.+|+.|+++|+++.+.|+..+++.+.+.+.+.++++++.+..    + ..+|+.+
T Consensus       124 ~-~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd~~~  201 (516)
T PLN02290        124 T-VTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHIAAPAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEVEIGE  201 (516)
T ss_pred             C-CCCCcchhhhHHHHHhc-CCccccCchHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEhHH
Confidence            4 333321 1  1223456 67888899999999999999999999999999999999999998852    2 4789999


Q ss_pred             HHHHHHHHHHHHHhhcCCChHHHH--HHHHHHHHH-Hhcc--ccccc--cCCcchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046128          136 EMKKFSFDVGILSIFGNLDDSYRE--KLKQNYLIV-DKGY--NSFPS--NIPGTAYHKALLARKRLSQIVSEIICERKEK  208 (435)
Q Consensus       136 ~~~~~~~~~~~~~~fG~~~~~~~~--~~~~~~~~~-~~~~--~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~  208 (435)
                      .+..+++++++.++||.+......  .....+... ....  ..++.  ++|....++.....+.+.+++.+.++++++.
T Consensus       202 ~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~  281 (516)
T PLN02290        202 YMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLLMEIIQSRRDC  281 (516)
T ss_pred             HHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999986432111  111111111 1111  11111  2333323344556677888888888877653


Q ss_pred             c------ccccchHHHhhccccc---CCCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHH
Q 046128          209 R------LLEKDLLGCLLNSRDE---KGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVH  279 (435)
Q Consensus       209 ~------~~~~~~l~~ll~~~~~---~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~  279 (435)
                      .      ....|+++.+++..+.   ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+++++
T Consensus       282 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~  361 (516)
T PLN02290        282 VEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVC  361 (516)
T ss_pred             hhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence            1      1246899999875332   223488999999999999999999999999999999999999999999999997


Q ss_pred             hhcCCCCCCCCHHhhhcCchhHHHHHHhhccccCcccceeeeeccccccCEEecCCCEEeccccccccCCCCC-CCCCCC
Q 046128          280 ESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFF-SEPQKV  358 (435)
Q Consensus       280 ~~~~~~~~~~~~~~l~~~p~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F  358 (435)
                      +.     ..++++++++||||+|||+|+||++|+++.++|.+.+|++++||.|||||.|+++.+++||||++| +||++|
T Consensus       362 ~~-----~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F  436 (516)
T PLN02290        362 GG-----ETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEF  436 (516)
T ss_pred             CC-----CCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhc
Confidence            42     368999999999999999999999999998889999999999999999999999999999999999 899999


Q ss_pred             CCCCCCCC--CCCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCcc-CCcccCCccCCCCCCceEEEecC
Q 046128          359 DPSRFKVA--PRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQ-NGIQYGPFPVPEKGLPARFWRVP  434 (435)
Q Consensus       359 ~P~R~l~~--~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~r~  434 (435)
                      +||||++.  .....++|||.|+|.|+|++||++|++++++.|+++|++++.++. .......+..|+++++|++++|+
T Consensus       437 ~PeRfl~~~~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        437 NPDRFAGRPFAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRHAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             CccccCCCCCCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcccCccceeeecCCCCCeEEEEeCC
Confidence            99999964  234579999999999999999999999999999999999987653 22223567899999999999986


No 10 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1e-72  Score=538.76  Aligned_cols=427  Identities=25%  Similarity=0.362  Sum_probs=338.7

Q ss_pred             CCCCCCCccccccccccccCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCcc-ccccccc
Q 046128            1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPK-SKEKIIG   79 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~-~~~~~~g   79 (435)
                      +||||+++|++|+++.+ ...++.++.+|+++||++|++++++.++|+++||+++++|+.++...|+.+... ......+
T Consensus        37 ~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~  115 (516)
T PLN02183         37 YPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLTY  115 (516)
T ss_pred             CCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhcccc
Confidence            69999999999999876 355778899999999999999999999999999999999999877666665332 1222222


Q ss_pred             --CCccccccchHHHHHHHH-HHhcCCHHHHhhhhHHHHHHHHHHHHHhh--cCCccchHHHHHHHHHHHHHHHhhcCCC
Q 046128           80 --PSALFFHQADYHARLRKL-VQSSLSPERIKKLIPDIEAIAISALESCA--VGQVINTFKEMKKFSFDVGILSIFGNLD  154 (435)
Q Consensus        80 --~~~~~~~~g~~~~~~R~~-l~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~d~~~~~~~~~~~~~~~~~fG~~~  154 (435)
                        ..+++..+|+.|+++|++ +.+.|+...++.+.+.+ +.+.++++.+.  .++++|+.+.+..+++++++.++||...
T Consensus       116 ~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~fG~~~  194 (516)
T PLN02183        116 DRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYRAAFGSSS  194 (516)
T ss_pred             CCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHhHhhcCcc
Confidence              355777899999999998 57899999998888754 57788888884  3568999999999999999999999865


Q ss_pred             hHHHHHHHHHHHHHHhccc------cccc--cC-CcchHHHHHHHHHHHHHHHHHHHHHHHhh---c-------ccccch
Q 046128          155 DSYREKLKQNYLIVDKGYN------SFPS--NI-PGTAYHKALLARKRLSQIVSEIICERKEK---R-------LLEKDL  215 (435)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~------~~~~--~~-p~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~-------~~~~~~  215 (435)
                      +.....+.+.+..+...+.      .+|.  ++ +....++..++.+.+.+++.+.++++.+.   .       ....|+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~  274 (516)
T PLN02183        195 NEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSEEAETDM  274 (516)
T ss_pred             cchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccH
Confidence            4433334444433322111      1111  11 22223455666777777777777665432   1       123589


Q ss_pred             HHHhhccccc-----------CCCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCC
Q 046128          216 LGCLLNSRDE-----------KGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNG  284 (435)
Q Consensus       216 l~~ll~~~~~-----------~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~  284 (435)
                      ++.+++...+           ++..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++++++.   
T Consensus       275 l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~---  351 (516)
T PLN02183        275 VDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGL---  351 (516)
T ss_pred             HHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC---
Confidence            9999874322           12358999999999999999999999999999999999999999999999999742   


Q ss_pred             CCCCCCHHhhhcCchhHHHHHHhhccccCcccceeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCC
Q 046128          285 GQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFK  364 (435)
Q Consensus       285 ~~~~~~~~~l~~~p~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l  364 (435)
                       ...++++++.+||||+|||+|+||++|++|+..|++.+|++++||.|||||.|.++.+++||||++|+||++|+||||+
T Consensus       352 -~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl  430 (516)
T PLN02183        352 -NRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFL  430 (516)
T ss_pred             -CCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhC
Confidence             3468999999999999999999999999998889999999999999999999999999999999999999999999999


Q ss_pred             CCC------CCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccC--Ccc----cCCccCCCCCCceEEEe
Q 046128          365 VAP------RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQN--GIQ----YGPFPVPEKGLPARFWR  432 (435)
Q Consensus       365 ~~~------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~--~~~----~~~~~~~~~~~~v~~~~  432 (435)
                      ++.      ....++|||+|+|+|+|++||++|+++++|.|+++|++++.++..  ...    ++.+..+...+.+.+++
T Consensus       431 ~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (516)
T PLN02183        431 KPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTY  510 (516)
T ss_pred             CCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeec
Confidence            642      345799999999999999999999999999999999999877531  111    22333344456666666


Q ss_pred             c
Q 046128          433 V  433 (435)
Q Consensus       433 r  433 (435)
                      |
T Consensus       511 r  511 (516)
T PLN02183        511 R  511 (516)
T ss_pred             C
Confidence            5


No 11 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.4e-72  Score=528.66  Aligned_cols=426  Identities=31%  Similarity=0.621  Sum_probs=349.9

Q ss_pred             CCCCCCCccccccccccc----cCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCcccccc
Q 046128            1 LPPGSMGWPFIGETLQIY----SQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKSKEK   76 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~----~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~~~~~   76 (435)
                      +||||+++|++||++.+.    ..+++.++.+++++||++|++++++.++|+++||+.+++++.++...|..++......
T Consensus        31 lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~  110 (472)
T PLN02987         31 LPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGSISN  110 (472)
T ss_pred             CcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHHHHH
Confidence            699999999999998863    2468899999999999999999999999999999999999998877776554433445


Q ss_pred             cccCCccccccchHHHHHHHHHHhcCCHHHHhhhh-HHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcCCCh
Q 046128           77 IIGPSALFFHQADYHARLRKLVQSSLSPERIKKLI-PDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDD  155 (435)
Q Consensus        77 ~~g~~~~~~~~g~~~~~~R~~l~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~fG~~~~  155 (435)
                      ++|.+++++.+|+.|+++|+++.+.++...+..+. ..+.+.++..++.|.  +++++.+.+.+++++++++++||.+..
T Consensus       111 ~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~t~~vi~~~~fg~~~~  188 (472)
T PLN02987        111 LLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSWS--SRVLLMEEAKKITFELTVKQLMSFDPG  188 (472)
T ss_pred             HhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhhc--cceehHHHHHHHHHHHHHHHHcCCCCh
Confidence            56656788889999999999987655555555533 224455555566663  468999999999999999999998654


Q ss_pred             HHHHHHHHHHHHHHhccccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHhhc----ccccchHHHhhcccccCCCCCC
Q 046128          156 SYREKLKQNYLIVDKGYNSFPSNIPGTAYHKALLARKRLSQIVSEIICERKEKR----LLEKDLLGCLLNSRDEKGRTLT  231 (435)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~l~~ll~~~~~~~~~l~  231 (435)
                      ...+.+...+......+...+..+....+++..++++++.+++.+.++++++..    ...+|+++.+++..+    .++
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~----~~~  264 (472)
T PLN02987        189 EWTESLRKEYVLVIEGFFSVPLPLFSTTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKKKDMLAALLASDD----GFS  264 (472)
T ss_pred             HHHHHHHHHHHHHHhhhhcCCCcCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccHHHHHHhcCC----CCC
Confidence            433333333333332222222112223467788889999999999998887542    234799999997642    489


Q ss_pred             HHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHhhhcCchhHHHHHHhhccc
Q 046128          232 EDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMA  311 (435)
Q Consensus       232 ~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~l~~~p~l~a~i~E~lRl~  311 (435)
                      ++++..++..+++||+|||+++++|++++|++||++|+++++|++++.+... .+..++++++.+|||++|+|+|+||++
T Consensus       265 ~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~-~~~~~~~~~l~~lpyl~a~i~EtLRl~  343 (472)
T PLN02987        265 DEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKS-DSYSLEWSDYKSMPFTQCVVNETLRVA  343 (472)
T ss_pred             HHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccC-CCCCCCHHHHhcChHHHHHHHHHHHcc
Confidence            9999999999999999999999999999999999999999999999875321 235578999999999999999999999


Q ss_pred             cCcccceeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCCC----CCCCccccCCCccCCCChHH
Q 046128          312 SIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAP----RPNTFVPFGLGVHACPGNEL  387 (435)
Q Consensus       312 p~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~----~~~~~~~Fg~G~r~C~G~~l  387 (435)
                      |+++.+.|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||++..    ....++|||+|+|.|||+++
T Consensus       344 p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G~r~C~G~~l  423 (472)
T PLN02987        344 NIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYEL  423 (472)
T ss_pred             CCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCCCCcceECCCCCCcCCCcHHH
Confidence            99998889999999999999999999999999999999999999999999999742    24679999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCeeEEcCccCCcccCCccCCCCCCceEEEecC
Q 046128          388 AKLEMLILIHHLVTEFRWEVVGSQNGIQYGPFPVPEKGLPARFWRVP  434 (435)
Q Consensus       388 a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  434 (435)
                      |++|++++++.|+++|+|++.+++ +..+.++++|.+++++++++|.
T Consensus       424 A~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        424 ARVALSVFLHRLVTRFSWVPAEQD-KLVFFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             HHHHHHHHHHHHHhceEEEECCCC-ceeecccccCCCCceEEEEecc
Confidence            999999999999999999997665 4555678899999999999985


No 12 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.8e-74  Score=541.65  Aligned_cols=427  Identities=29%  Similarity=0.459  Sum_probs=347.1

Q ss_pred             CCCCCCCccccccccccccC--CchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhcccc--ccccCcccccc
Q 046128            1 LPPGSMGWPFIGETLQIYSQ--DPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHF--FKPTYPKSKEK   76 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~~~--~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~--~~~~~~~~~~~   76 (435)
                      +||||+++|++|+++++...  +...++.++..+||++|+.++|+.++|+++||+.+++|+.++...  +...+...+..
T Consensus        36 ~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~~~  115 (497)
T KOG0157|consen   36 LPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESLKP  115 (497)
T ss_pred             cCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHHHH
Confidence            58999999999999998544  566788999999999999999999999999999999999644332  33344468889


Q ss_pred             cccCCccccccchHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhh--cCCc-cchHHHHHHHHHHHHHHHhhcCC
Q 046128           77 IIGPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALESCA--VGQV-INTFKEMKKFSFDVGILSIFGNL  153 (435)
Q Consensus        77 ~~g~~~~~~~~g~~~~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~-~d~~~~~~~~~~~~~~~~~fG~~  153 (435)
                      ++| .++++++|+.|+++||++.+.|+.+.++.+...+.+....++..+.  ..+. +|+.+.+.++++++++.++||..
T Consensus       116 ~lG-~gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~~~G~~  194 (497)
T KOG0157|consen  116 WLG-DGLLFSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKTAMGPE  194 (497)
T ss_pred             Hhc-CccccCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHHhcCCc
Confidence            999 5888888999999999999999999999999888888777655543  2333 99999999999999999999932


Q ss_pred             C-hHHHH---HHHHHHHHHHhccccccccCC-c-------chHHHHHHHHHHHHHHHHHHHHHHHhhc--------cccc
Q 046128          154 D-DSYRE---KLKQNYLIVDKGYNSFPSNIP-G-------TAYHKALLARKRLSQIVSEIICERKEKR--------LLEK  213 (435)
Q Consensus       154 ~-~~~~~---~~~~~~~~~~~~~~~~~~~~p-~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~~~  213 (435)
                      . +....   ....++...... ...+...| +       ...++..++.+.+.+.++++|++++++.        ....
T Consensus       195 ~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~~~~~  273 (497)
T KOG0157|consen  195 SLDAEGPELFEYVQAFDDLTEL-ISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGEEKKRL  273 (497)
T ss_pred             cccccCCcccHHHHHHHHHHHH-HHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhh
Confidence            2 11111   122222211111 11111112 1       1345667789999999999999888641        2346


Q ss_pred             chHHHhhcccccCCCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHh
Q 046128          214 DLLGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQ  293 (435)
Q Consensus       214 ~~l~~ll~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~  293 (435)
                      |+++.+....+   ..++++++.+++.++++||+|||+++++|+++.|+.||++|+|+++|+.++.+...   ...+..+
T Consensus       274 d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~---~~~~~~~  347 (497)
T KOG0157|consen  274 DFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRD---DKWEVEK  347 (497)
T ss_pred             hHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCC---CCCChhh
Confidence            77775333222   46999999999999999999999999999999999999999999999999985422   1122233


Q ss_pred             hhcCchhHHHHHHhhccccCcccceeeeecccccc-CEEecCCCEEeccccccccCCCCCC-CCCCCCCCCCCCC-----
Q 046128          294 TKNMRCTYRFILESMRMASIISFTFREAVCDVEYK-GFLIPKGWKVMPLFRNIHHNSEFFS-EPQKVDPSRFKVA-----  366 (435)
Q Consensus       294 l~~~p~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~F~P~R~l~~-----  366 (435)
                      .++|+||++||+|||||+||+|...|.+.+|++++ ||.||||+.|+++.+++|||+++|+ ||++|+||||++.     
T Consensus       348 ~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~  427 (497)
T KOG0157|consen  348 LDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAK  427 (497)
T ss_pred             hhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCC
Confidence            33699999999999999999999999999999994 8999999999999999999999997 9999999999964     


Q ss_pred             CCCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCcc-CCcccCCccCCCCCCceEEEecCC
Q 046128          367 PRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQ-NGIQYGPFPVPEKGLPARFWRVPC  435 (435)
Q Consensus       367 ~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~r~~  435 (435)
                      .++.+|+|||+|+|.|+|++||++|+|+++++++++|+|++..+. .......+++|+.+++|++++|..
T Consensus       428 ~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  428 RHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELTLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             CCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEEEEecCCeEEEEEeCCC
Confidence            236799999999999999999999999999999999999999886 555668899999999999999963


No 13 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=4.1e-73  Score=538.89  Aligned_cols=424  Identities=19%  Similarity=0.296  Sum_probs=338.2

Q ss_pred             CCCCCCccccccccccccCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCc-c-ccccccc
Q 046128            2 PPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYP-K-SKEKIIG   79 (435)
Q Consensus         2 PPgp~~~p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~-~-~~~~~~g   79 (435)
                      +|||+++|++||++.+. .+++.++.+++++||++|++++|+.++|+++||+.+++++.++...|.++.. . .....+|
T Consensus        31 ~pgp~~~p~~G~~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~~~  109 (482)
T PTZ00404         31 LKGPIPIPILGNLHQLG-NLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKHGTFY  109 (482)
T ss_pred             CCCCCCCCeeccHhhhc-ccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeeeeccC
Confidence            79999999999998874 5899999999999999999999999999999999999999876554544322 1 1112234


Q ss_pred             CCccccccchHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhh----cCCccchHHHHHHHHHHHHHHHhhcCCCh
Q 046128           80 PSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALESCA----VGQVINTFKEMKKFSFDVGILSIFGNLDD  155 (435)
Q Consensus        80 ~~~~~~~~g~~~~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~d~~~~~~~~~~~~~~~~~fG~~~~  155 (435)
                       .+++..+|+.|+++|+++.+.|++..++.+.+.+.+.+.++++.+.    .++.+|+.+++..+++++++.++||.+.+
T Consensus       110 -~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~  188 (482)
T PTZ00404        110 -HGIVTSSGEYWKRNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYIFNEDIS  188 (482)
T ss_pred             -CceeccChHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhccccc
Confidence             6788889999999999999999999999999999999999998874    25569999999999999999999998543


Q ss_pred             HH-------HHHHHHHHHHHHhcccc------ccccCCc--chHHHHHHHHHHHHHHHHHHHHHHHhh--cccccchHHH
Q 046128          156 SY-------REKLKQNYLIVDKGYNS------FPSNIPG--TAYHKALLARKRLSQIVSEIICERKEK--RLLEKDLLGC  218 (435)
Q Consensus       156 ~~-------~~~~~~~~~~~~~~~~~------~~~~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~l~~  218 (435)
                      ..       ...+......+......      ++...+.  .......++.+.+.+++.+.+++++++  .....|+++.
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~dll~~  268 (482)
T PTZ00404        189 FDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDPEVPRDLLDL  268 (482)
T ss_pred             cccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCcccHHHH
Confidence            21       12233333222221111      1110110  011222345566777777777665543  2235689999


Q ss_pred             hhcccccCCCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHhhhcCc
Q 046128          219 LLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMR  298 (435)
Q Consensus       219 ll~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~l~~~p  298 (435)
                      +++...+. ...+.+++++++..+++||+|||+++++|++++|++||++|+|+++|++++++.    ...++++++.+||
T Consensus       269 ll~~~~~~-~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~----~~~~~~~~l~~L~  343 (482)
T PTZ00404        269 LIKEYGTN-TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNG----RNKVLLSDRQSTP  343 (482)
T ss_pred             HHHHhccC-CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcC----CCCCCccccccCh
Confidence            99764321 112234588999999999999999999999999999999999999999999753    3457899999999


Q ss_pred             hhHHHHHHhhccccCccc-ceeeeeccccc-cCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCccccC
Q 046128          299 CTYRFILESMRMASIISF-TFREAVCDVEY-KGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFG  376 (435)
Q Consensus       299 ~l~a~i~E~lRl~p~~~~-~~r~~~~d~~~-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~Fg  376 (435)
                      ||+|||+|+||++|+++. ++|.+.+|+++ +||.|||||.|+++.+++||||++||||++|+||||++......++|||
T Consensus       344 yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~~~~~~~pFg  423 (482)
T PTZ00404        344 YTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPDSNDAFMPFS  423 (482)
T ss_pred             HHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCCCCCceeccC
Confidence            999999999999999997 57999999999 9999999999999999999999999999999999999876778999999


Q ss_pred             CCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccCC-c--ccCCccCCCCCCceEEEec
Q 046128          377 LGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNG-I--QYGPFPVPEKGLPARFWRV  433 (435)
Q Consensus       377 ~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~-~--~~~~~~~~~~~~~v~~~~r  433 (435)
                      +|+|.|+|+++|++|++++++.|+++|++++.++... .  ..+.+.. +.+++|++++|
T Consensus       424 ~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        424 IGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence            9999999999999999999999999999998755321 1  2234445 56799999987


No 14 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.6e-72  Score=537.60  Aligned_cols=429  Identities=23%  Similarity=0.301  Sum_probs=348.3

Q ss_pred             CCCCCCCccccccccccccCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCcccccccc--
Q 046128            1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKSKEKII--   78 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~~~~~~~--   78 (435)
                      +||||+++|++||++.+ ..+++.++.+|+++||++|++++|+.++|+++||+++++++.++...|.++........+  
T Consensus        35 ~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~  113 (517)
T PLN02687         35 LPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAY  113 (517)
T ss_pred             CCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhcc
Confidence            59999999999999887 467999999999999999999999999999999999999998876667765432211112  


Q ss_pred             -cCCccccccchHHHHHHHHHH-hcCCHHHHhhhhHHHHHHHHHHHHHhh---cCCccchHHHHHHHHHHHHHHHhhcCC
Q 046128           79 -GPSALFFHQADYHARLRKLVQ-SSLSPERIKKLIPDIEAIAISALESCA---VGQVINTFKEMKKFSFDVGILSIFGNL  153 (435)
Q Consensus        79 -g~~~~~~~~g~~~~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~d~~~~~~~~~~~~~~~~~fG~~  153 (435)
                       +..+++..+|+.|+++|+++. +.|+.+.++.+.+.+.+.++++++.+.   .++++|+.+++..+++++++..+||..
T Consensus       114 ~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~  193 (517)
T PLN02687        114 NYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAMVGRR  193 (517)
T ss_pred             CCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhCcc
Confidence             234556678999999999998 799999999999999999999998885   346799999999999999999999975


Q ss_pred             Ch-----HHHHHHHHHHHHHHhccc------cccc--cCCc-chHHHHHHHHHHHHHHHHHHHHHHHhhc----ccccch
Q 046128          154 DD-----SYREKLKQNYLIVDKGYN------SFPS--NIPG-TAYHKALLARKRLSQIVSEIICERKEKR----LLEKDL  215 (435)
Q Consensus       154 ~~-----~~~~~~~~~~~~~~~~~~------~~~~--~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~  215 (435)
                      ..     .....+...+..+.....      .+|.  +++. ...++..++.+.+.+++.+.++++++..    ....|+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~  273 (517)
T PLN02687        194 VFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGSEEHKDL  273 (517)
T ss_pred             ccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccH
Confidence            32     122334443333322111      1121  1211 1234455667778888888888877542    234699


Q ss_pred             HHHhhccccc-----CCCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCC
Q 046128          216 LGCLLNSRDE-----KGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALT  290 (435)
Q Consensus       216 l~~ll~~~~~-----~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~  290 (435)
                      ++.+++..++     ++..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++++.+    .+..++
T Consensus       274 l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~----~~~~~~  349 (517)
T PLN02687        274 LSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVG----RDRLVS  349 (517)
T ss_pred             HHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC----CCCCCC
Confidence            9999976432     2346999999999999999999999999999999999999999999999999864    245689


Q ss_pred             HHhhhcCchhHHHHHHhhccccCccc-ceeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCCC--
Q 046128          291 WAQTKNMRCTYRFILESMRMASIISF-TFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAP--  367 (435)
Q Consensus       291 ~~~l~~~p~l~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~--  367 (435)
                      .+++.+||||+|||+|+||++|+++. +.|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||++..  
T Consensus       350 ~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~  429 (517)
T PLN02687        350 ESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEH  429 (517)
T ss_pred             HHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCc
Confidence            99999999999999999999999997 579999999999999999999999999999999999999999999999631  


Q ss_pred             -------CCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccC--Cc----ccCCccCCCCCCceEEEecC
Q 046128          368 -------RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQN--GI----QYGPFPVPEKGLPARFWRVP  434 (435)
Q Consensus       368 -------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~--~~----~~~~~~~~~~~~~v~~~~r~  434 (435)
                             ....++|||+|+|.|+|++||++|++++++.|+++|++++.++..  ..    ..+....+..++.+++++|.
T Consensus       430 ~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        430 AGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             cccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCC
Confidence                   234799999999999999999999999999999999999876531  22    22344456677888888874


No 15 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.3e-72  Score=536.76  Aligned_cols=431  Identities=23%  Similarity=0.333  Sum_probs=345.2

Q ss_pred             CCCCCCCccccccccccc--cCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCcccccccc
Q 046128            1 LPPGSMGWPFIGETLQIY--SQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKSKEKII   78 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~~~~~~~   78 (435)
                      +||||+++|++||++.+.  ..+++.++.+|+++||++|++++|+.++|+++||+++++++.++...|+.+.......++
T Consensus        36 lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~~~  115 (519)
T PLN00168         36 LPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASSRLL  115 (519)
T ss_pred             CCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccchhhh
Confidence            699999999999987653  135788999999999999999999999999999999999999887777765443333344


Q ss_pred             cC-Ccccc--ccchHHHHHHH-HHHhcCCHHHHhhhhHHHHHHHHHHHHHhhc----CCccchHHHHHHHHHHHHHHHhh
Q 046128           79 GP-SALFF--HQADYHARLRK-LVQSSLSPERIKKLIPDIEAIAISALESCAV----GQVINTFKEMKKFSFDVGILSIF  150 (435)
Q Consensus        79 g~-~~~~~--~~g~~~~~~R~-~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~d~~~~~~~~~~~~~~~~~f  150 (435)
                      |. .+++.  .+|+.|+++|| ++.+.|+.++++.+.+.+.+.++++++.+.+    ++.+|+.+.+..++.++++.++|
T Consensus       116 ~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~~~f  195 (519)
T PLN00168        116 GESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLVLMCF  195 (519)
T ss_pred             ccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHc
Confidence            52 23333  68999999986 7899999999999999999999999988853    24678999999999999999999


Q ss_pred             cCCChHHH-HHHHHHHHHHH---hcc----ccccccC---CcchHHHHHHHHHHHHHHHHHHHHHHHhhcc---------
Q 046128          151 GNLDDSYR-EKLKQNYLIVD---KGY----NSFPSNI---PGTAYHKALLARKRLSQIVSEIICERKEKRL---------  210 (435)
Q Consensus       151 G~~~~~~~-~~~~~~~~~~~---~~~----~~~~~~~---p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------  210 (435)
                      |.+.+... ..+......+.   ...    ..+|.+.   ....+.+..++.+++.+++.+.++++++...         
T Consensus       196 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  275 (519)
T PLN00168        196 GERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQGGEPP  275 (519)
T ss_pred             CCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccc
Confidence            98654321 22222222111   111    1122111   1112344556777888888888877654310         


Q ss_pred             -----cccchHHHhhcccc--cCCCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcC
Q 046128          211 -----LEKDLLGCLLNSRD--EKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNN  283 (435)
Q Consensus       211 -----~~~~~l~~ll~~~~--~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~  283 (435)
                           ...|+++.|++...  +++..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++++++.  
T Consensus       276 ~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~--  353 (519)
T PLN00168        276 KKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGD--  353 (519)
T ss_pred             cccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--
Confidence                 13589999987542  223459999999999999999999999999999999999999999999999999742  


Q ss_pred             CCCCCCCHHhhhcCchhHHHHHHhhccccCcccc-eeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCC
Q 046128          284 GGQRALTWAQTKNMRCTYRFILESMRMASIISFT-FREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSR  362 (435)
Q Consensus       284 ~~~~~~~~~~l~~~p~l~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R  362 (435)
                       ....++++++.+||||+|||+|+||++|+++.. +|.+.+|++++||.|||||.|.++.+++||||++|+||++|+|||
T Consensus       354 -~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeR  432 (519)
T PLN00168        354 -DQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPER  432 (519)
T ss_pred             -CCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCccc
Confidence             235689999999999999999999999999875 699999999999999999999999999999999999999999999


Q ss_pred             CCCCC----------CCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccC-Ccc--cCCccCCCCCCceE
Q 046128          363 FKVAP----------RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQN-GIQ--YGPFPVPEKGLPAR  429 (435)
Q Consensus       363 ~l~~~----------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~-~~~--~~~~~~~~~~~~v~  429 (435)
                      |++..          ....++|||.|+|+|+|++||++|++++++.|+++|+|++.++.. +..  ......++++++++
T Consensus       433 f~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (519)
T PLN00168        433 FLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTVMAKPLRAR  512 (519)
T ss_pred             CCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEeecCCcEEE
Confidence            98631          234799999999999999999999999999999999999976532 221  23466788899999


Q ss_pred             EEecC
Q 046128          430 FWRVP  434 (435)
Q Consensus       430 ~~~r~  434 (435)
                      +++|+
T Consensus       513 ~~~R~  517 (519)
T PLN00168        513 LVPRR  517 (519)
T ss_pred             EEecc
Confidence            99996


No 16 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.4e-72  Score=533.12  Aligned_cols=429  Identities=21%  Similarity=0.289  Sum_probs=345.8

Q ss_pred             CCCCCCCccccccccccccCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCccc--ccccc
Q 046128            1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKS--KEKII   78 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~~--~~~~~   78 (435)
                      +||||+++|++||++.+ ..+++.++.+++++||+||++++|+.++|+++||+.+++++.++...|.++....  .....
T Consensus        32 ~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~  110 (504)
T PLN00110         32 LPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHLAY  110 (504)
T ss_pred             CcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhhcc
Confidence            69999999999998776 4678999999999999999999999999999999999999988776676654321  11223


Q ss_pred             c-CCccccccchHHHHHHHHHHh-cCCHHHHhhhhHHHHHHHHHHHHHhh----cCCccchHHHHHHHHHHHHHHHhhcC
Q 046128           79 G-PSALFFHQADYHARLRKLVQS-SLSPERIKKLIPDIEAIAISALESCA----VGQVINTFKEMKKFSFDVGILSIFGN  152 (435)
Q Consensus        79 g-~~~~~~~~g~~~~~~R~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~d~~~~~~~~~~~~~~~~~fG~  152 (435)
                      | ..+++..+|+.|+++|+++.+ .|+...++.+.+.+.+.+.++++.+.    .++++|+.+++..+++++++..+||.
T Consensus       111 ~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~  190 (504)
T PLN00110        111 GAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVILSR  190 (504)
T ss_pred             CCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHHhCC
Confidence            3 346677889999999999985 79999999999988888777776653    35689999999999999999999998


Q ss_pred             CC----hHHHHHHHHHHHHHHhcc------ccccc--cCCcc-hHHHHHHHHHHHHHHHHHHHHHHHhhc---ccccchH
Q 046128          153 LD----DSYREKLKQNYLIVDKGY------NSFPS--NIPGT-AYHKALLARKRLSQIVSEIICERKEKR---LLEKDLL  216 (435)
Q Consensus       153 ~~----~~~~~~~~~~~~~~~~~~------~~~~~--~~p~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~l  216 (435)
                      +.    +.....+...+..+....      ..+|.  +++.. ..++..+..+.+.+++.+.++++++..   ....|++
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l  270 (504)
T PLN00110        191 RVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHERKGNPDFL  270 (504)
T ss_pred             cccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCChh
Confidence            53    112223333333322211      11111  11211 123344456777777778777766532   2246899


Q ss_pred             HHhhccccc-CCCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHhhh
Q 046128          217 GCLLNSRDE-KGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTK  295 (435)
Q Consensus       217 ~~ll~~~~~-~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~l~  295 (435)
                      +.+++..+. ++..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++++.+.    ...+++++++
T Consensus       271 ~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~----~~~~~~~~~~  346 (504)
T PLN00110        271 DVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGR----NRRLVESDLP  346 (504)
T ss_pred             hHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC----CCCCCHHHhh
Confidence            999976432 34469999999999999999999999999999999999999999999999998742    4568999999


Q ss_pred             cCchhHHHHHHhhccccCccc-ceeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCCCC------
Q 046128          296 NMRCTYRFILESMRMASIISF-TFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPR------  368 (435)
Q Consensus       296 ~~p~l~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~------  368 (435)
                      +||||+|||+|+||++|+++. ++|.+.+|+.++||.|||||.|+++.+++||||++|+||++|+||||++...      
T Consensus       347 ~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~  426 (504)
T PLN00110        347 KLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPR  426 (504)
T ss_pred             cChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccC
Confidence            999999999999999999997 5799999999999999999999999999999999999999999999986411      


Q ss_pred             --CCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccC-C--cccCCccCCCCCCceEEEecC
Q 046128          369 --PNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQN-G--IQYGPFPVPEKGLPARFWRVP  434 (435)
Q Consensus       369 --~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~-~--~~~~~~~~~~~~~~v~~~~r~  434 (435)
                        ...++|||.|+|.|+|++||++|++++++.|+++|++++.++.. .  ...+.+..|+.++.+++++|.
T Consensus       427 ~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        427 GNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             CCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCceEeeccCC
Confidence              23799999999999999999999999999999999999877632 1  123556789999999999985


No 17 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=2.7e-72  Score=535.57  Aligned_cols=429  Identities=21%  Similarity=0.313  Sum_probs=343.0

Q ss_pred             CCCCCCCccccccccccccCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCcc-ccc--cc
Q 046128            1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPK-SKE--KI   77 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~-~~~--~~   77 (435)
                      +||||+++|++||+.++...+++.++.+++++||++|++++|+.++|+++||+++++|+.++...|..+... ...  ..
T Consensus        29 ~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~~~~  108 (499)
T PLN03234         29 LPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSY  108 (499)
T ss_pred             CCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhhhcc
Confidence            589999999999998875447889999999999999999999999999999999999999877667655321 111  11


Q ss_pred             ccCCccccccchHHHHHHHHH-HhcCCHHHHhhhhHHHHHHHHHHHHHhh----cCCccchHHHHHHHHHHHHHHHhhcC
Q 046128           78 IGPSALFFHQADYHARLRKLV-QSSLSPERIKKLIPDIEAIAISALESCA----VGQVINTFKEMKKFSFDVGILSIFGN  152 (435)
Q Consensus        78 ~g~~~~~~~~g~~~~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~d~~~~~~~~~~~~~~~~~fG~  152 (435)
                      .+....+...++.|+++|+.+ .+.|+++++..+.+.+.+.++++++.+.    .++++|+.+.+..+++++++..+||.
T Consensus       109 ~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~  188 (499)
T PLN03234        109 QGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQAFGK  188 (499)
T ss_pred             CCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHHHhCC
Confidence            221222345678999999985 6899999999999999999999999874    35689999999999999999999998


Q ss_pred             CChHHH---HHHHHHHHHHHhccc--cccccCCc--------chHHHHHHHHHHHHHHHHHHHHHHHhh---cccccchH
Q 046128          153 LDDSYR---EKLKQNYLIVDKGYN--SFPSNIPG--------TAYHKALLARKRLSQIVSEIICERKEK---RLLEKDLL  216 (435)
Q Consensus       153 ~~~~~~---~~~~~~~~~~~~~~~--~~~~~~p~--------~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~l  216 (435)
                      +.+...   ..+............  .+...+|.        ...++..++.+.+.+++.+.++++++.   .....|++
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l  268 (499)
T PLN03234        189 RYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPKQETESFI  268 (499)
T ss_pred             cccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCcccHH
Confidence            654322   222222222211111  11111111        113466778888899999998886543   12346889


Q ss_pred             HHhhcccccC--CCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHhh
Q 046128          217 GCLLNSRDEK--GRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQT  294 (435)
Q Consensus       217 ~~ll~~~~~~--~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~l  294 (435)
                      +.+++..+++  +..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++++.+    +...++++++
T Consensus       269 ~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~----~~~~~~~~~l  344 (499)
T PLN03234        269 DLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIG----DKGYVSEEDI  344 (499)
T ss_pred             HHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC----CCCCCCHHHH
Confidence            8888654322  235899999999999999999999999999999999999999999999999874    2456899999


Q ss_pred             hcCchhHHHHHHhhccccCcccc-eeeeeccccccCEEecCCCEEeccccccccCCCCC-CCCCCCCCCCCCCCC-----
Q 046128          295 KNMRCTYRFILESMRMASIISFT-FREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFF-SEPQKVDPSRFKVAP-----  367 (435)
Q Consensus       295 ~~~p~l~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~-----  367 (435)
                      .+|||++|||+|+||++|+++.. .|++.+|+.++||.|||||.|+++.+++||||++| +||++|+||||+++.     
T Consensus       345 ~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~  424 (499)
T PLN03234        345 PNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDF  424 (499)
T ss_pred             hcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCc
Confidence            99999999999999999999985 59999999999999999999999999999999999 899999999999742     


Q ss_pred             --CCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCcc--CCc----ccCCccCCCCCCceEEEec
Q 046128          368 --RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQ--NGI----QYGPFPVPEKGLPARFWRV  433 (435)
Q Consensus       368 --~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~--~~~----~~~~~~~~~~~~~v~~~~r  433 (435)
                        ....++|||+|+|.|+|+++|++|++++++.|+++|+|++.++.  ...    .++....|++.+.+.+++|
T Consensus       425 ~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        425 KGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence              24579999999999999999999999999999999999998752  111    2244556777777777665


No 18 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.4e-72  Score=537.07  Aligned_cols=424  Identities=30%  Similarity=0.501  Sum_probs=352.2

Q ss_pred             CCCCCCcccccccccccc-CCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCc-ccccc---
Q 046128            2 PPGSMGWPFIGETLQIYS-QDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYP-KSKEK---   76 (435)
Q Consensus         2 PPgp~~~p~lG~~~~~~~-~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~-~~~~~---   76 (435)
                      ||||+++|++||++++.. .+++.++.+++++||+||++++++.++++|+||+.+++|+..+...++.... .....   
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            999999999999999853 5788999999999999999999999999999999999999988766666432 12221   


Q ss_pred             cccCCccccccchHHHHHHHHHHhcCCHH-HHhhhhHHHHHHHHHHHHHhhc----CCccchHHHHHHHHHHHHHHHhhc
Q 046128           77 IIGPSALFFHQADYHARLRKLVQSSLSPE-RIKKLIPDIEAIAISALESCAV----GQVINTFKEMKKFSFDVGILSIFG  151 (435)
Q Consensus        77 ~~g~~~~~~~~g~~~~~~R~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~----~~~~d~~~~~~~~~~~~~~~~~fG  151 (435)
                      ..+..+++..+++.|+.+|+++.+.|+.. .+ .+.+.+.+.++++++.+..    ++.+|+.++++.+++++++.++||
T Consensus        81 ~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~fG  159 (463)
T PF00067_consen   81 PFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLFG  159 (463)
T ss_dssp             HHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccccc
Confidence            23347888899999999999999999988 66 8899999999999888754    236999999999999999999999


Q ss_pred             CCCh----HHHHHHHHHHHHHHhcc--------cccc--ccCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcc----ccc
Q 046128          152 NLDD----SYREKLKQNYLIVDKGY--------NSFP--SNIPGTAYHKALLARKRLSQIVSEIICERKEKRL----LEK  213 (435)
Q Consensus       152 ~~~~----~~~~~~~~~~~~~~~~~--------~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~  213 (435)
                      .+.+    .....+...+..+...+        ..+|  .+++....++..++.+.+.+++.+.++++++...    ...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (463)
T PF00067_consen  160 KDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDGDESRR  239 (463)
T ss_dssp             SHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSSSSCS
T ss_pred             ceeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            8633    11223333333332111        1122  2356566666777888999999999999887633    357


Q ss_pred             chHHHhhccc-ccCC-CCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCH
Q 046128          214 DLLGCLLNSR-DEKG-RTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTW  291 (435)
Q Consensus       214 ~~l~~ll~~~-~~~~-~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~  291 (435)
                      |+++.++... +.++ ..+++++++.++..+++||++||+++++|++++|++||++|+|+++|++++.+    .+..++.
T Consensus       240 d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~----~~~~~~~  315 (463)
T PF00067_consen  240 DLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLG----DGREITF  315 (463)
T ss_dssp             SHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTT----TSSSHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccccc
Confidence            9999999886 3433 37999999999999999999999999999999999999999999999999973    3447899


Q ss_pred             HhhhcCchhHHHHHHhhccccCcc-cceeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCCC---
Q 046128          292 AQTKNMRCTYRFILESMRMASIIS-FTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAP---  367 (435)
Q Consensus       292 ~~l~~~p~l~a~i~E~lRl~p~~~-~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~---  367 (435)
                      +++.+||||+|||+|+||++|+++ .+.|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||++..   
T Consensus       316 ~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~  395 (463)
T PF00067_consen  316 EDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGIS  395 (463)
T ss_dssp             HHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTB
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999999999 6779999999999999999999999999999999999999999999999863   


Q ss_pred             --CCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccC-Cccc--CCccCCCCCCceEE
Q 046128          368 --RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQN-GIQY--GPFPVPEKGLPARF  430 (435)
Q Consensus       368 --~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~-~~~~--~~~~~~~~~~~v~~  430 (435)
                        ....++|||.|+|.|||++||++|++++++.||++|++++.++.. ....  ..++.|+++++|.|
T Consensus       396 ~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  396 NRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             CSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEEEE
T ss_pred             ccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEEeC
Confidence              477899999999999999999999999999999999999976432 2222  25788888898876


No 19 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2.7e-71  Score=522.89  Aligned_cols=425  Identities=20%  Similarity=0.248  Sum_probs=333.6

Q ss_pred             CCCCCCccccccccccccCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCc-ccccccccC
Q 046128            2 PPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYP-KSKEKIIGP   80 (435)
Q Consensus         2 PPgp~~~p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~-~~~~~~~g~   80 (435)
                      ||||+++|++||++++...+++.++.+|+++||++|++++++.++|+|+||+.+++|+.++...|.++.. .....+.|.
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            8999999999999988645689999999999999999999999999999999999999988777766542 222333442


Q ss_pred             C-ccccc-cchHHHHHHHHHHh-cCCHHHHhhhhHHHHHHHHHHHHHhh------cCCccchHHHHHHHHHHHHHHHhhc
Q 046128           81 S-ALFFH-QADYHARLRKLVQS-SLSPERIKKLIPDIEAIAISALESCA------VGQVINTFKEMKKFSFDVGILSIFG  151 (435)
Q Consensus        81 ~-~~~~~-~g~~~~~~R~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~d~~~~~~~~~~~~~~~~~fG  151 (435)
                      . .++.. +|+.|+++|+++.+ .|+...++.+.+.+++.+..+++.+.      .++++|+.+.+..+++++++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            2 34444 48999999986654 57776777777776666665555542      2567999999999999999999999


Q ss_pred             CCChHHH-----------HHHHHHHHHHHhccc------ccc--ccCCcchHHHHH-HHHHHHHHHHHHHHHHHHhh---
Q 046128          152 NLDDSYR-----------EKLKQNYLIVDKGYN------SFP--SNIPGTAYHKAL-LARKRLSQIVSEIICERKEK---  208 (435)
Q Consensus       152 ~~~~~~~-----------~~~~~~~~~~~~~~~------~~~--~~~p~~~~~~~~-~~~~~~~~~~~~~i~~~~~~---  208 (435)
                      .+.+...           ..+...+..+.....      .+|  .+++...+.+.. +....+.+++.+.+++++++   
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR  240 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            8633211           111212222211111      112  123332222222 22333456666777665543   


Q ss_pred             cccccchHHHhhcccccCCCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCC
Q 046128          209 RLLEKDLLGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRA  288 (435)
Q Consensus       209 ~~~~~~~l~~ll~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~  288 (435)
                      .....|+++.+++...    .++++++..++.++++||+|||+++++|++++|++||++|+|+++|++.+.+.     ..
T Consensus       241 ~~~~~d~l~~ll~~~~----~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~-----~~  311 (466)
T PLN02655        241 GEERDCYLDFLLSEAT----HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGD-----ER  311 (466)
T ss_pred             CCCcccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC-----CC
Confidence            2234689999997642    48999999999999999999999999999999999999999999999999742     33


Q ss_pred             CCHHhhhcCchhHHHHHHhhccccCcccc-eeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCCC
Q 046128          289 LTWAQTKNMRCTYRFILESMRMASIISFT-FREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAP  367 (435)
Q Consensus       289 ~~~~~l~~~p~l~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~  367 (435)
                      +++++++++|||+|+|+|+||++|+++.. +|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++..
T Consensus       312 ~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~  391 (466)
T PLN02655        312 VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEK  391 (466)
T ss_pred             CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCC
Confidence            89999999999999999999999999986 59999999999999999999999999999999999999999999999752


Q ss_pred             ----CCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccCCc--ccCCccCCCCCCceEEEecCC
Q 046128          368 ----RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNGI--QYGPFPVPEKGLPARFWRVPC  435 (435)
Q Consensus       368 ----~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~r~~  435 (435)
                          ....++|||+|+|.|||++||+.+++++++.||++|+|++.++....  ..+.+.++++++.+++++|.+
T Consensus       392 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        392 YESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             cccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEeecCCcEEEEeecCC
Confidence                34689999999999999999999999999999999999997653211  224456799999999999864


No 20 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=2.9e-71  Score=527.52  Aligned_cols=408  Identities=23%  Similarity=0.372  Sum_probs=325.1

Q ss_pred             CCCCCCCccccccccccccCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCccccccc--c
Q 046128            1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKSKEKI--I   78 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~~~~~~--~   78 (435)
                      +||||+++|++||++++...+++.++.+|+++||++|++++++.++|+++||+.+++++.++...|.+.........  .
T Consensus        30 ~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~  109 (502)
T PLN02966         30 LPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISY  109 (502)
T ss_pred             CCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccceeecc
Confidence            69999999999999988545789999999999999999999999999999999999999887765655432211111  2


Q ss_pred             cCC-ccccccchHHHHHHHH-HHhcCCHHHHhhhhHHHHHHHHHHHHHhh----cCCccchHHHHHHHHHHHHHHHhhcC
Q 046128           79 GPS-ALFFHQADYHARLRKL-VQSSLSPERIKKLIPDIEAIAISALESCA----VGQVINTFKEMKKFSFDVGILSIFGN  152 (435)
Q Consensus        79 g~~-~~~~~~g~~~~~~R~~-l~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~d~~~~~~~~~~~~~~~~~fG~  152 (435)
                      |.. ..+..+|+.|+++|++ +.+.|++..+..+.+.+.+.+.++++.|.    .++.+|+.+++..+++++++.++||.
T Consensus       110 ~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~~fG~  189 (502)
T PLN02966        110 GRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGK  189 (502)
T ss_pred             CcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHHHhCC
Confidence            322 2244678999999999 78899999999999999999999998884    24579999999999999999999998


Q ss_pred             CChHHHH---HHHHHHHHHHhcccc--ccccCCc-------chH-HHHHHHHHHHHHHHHHHHHHHHhh---cccccchH
Q 046128          153 LDDSYRE---KLKQNYLIVDKGYNS--FPSNIPG-------TAY-HKALLARKRLSQIVSEIICERKEK---RLLEKDLL  216 (435)
Q Consensus       153 ~~~~~~~---~~~~~~~~~~~~~~~--~~~~~p~-------~~~-~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~l  216 (435)
                      +.+....   .+...+.........  +..++|.       ..+ .....+.+.+.+.+.+.+++....   .....+++
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l  269 (502)
T PLN02966        190 KYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVKPETESMI  269 (502)
T ss_pred             ccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccHH
Confidence            6432222   222222221111110  0011111       111 112234455666666666654322   12246899


Q ss_pred             HHhhcccccC--CCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHhh
Q 046128          217 GCLLNSRDEK--GRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQT  294 (435)
Q Consensus       217 ~~ll~~~~~~--~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~l  294 (435)
                      +.+++..+++  +..++++++..++.++++||+|||+++++|++++|++||++|+|+++|+.++.+..  ++..++++++
T Consensus       270 ~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~--~~~~~~~~dl  347 (502)
T PLN02966        270 DLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEK--GSTFVTEDDV  347 (502)
T ss_pred             HHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccc--CCCcCCHhhc
Confidence            9998754432  34589999999999999999999999999999999999999999999999997531  2345799999


Q ss_pred             hcCchhHHHHHHhhccccCcccc-eeeeeccccccCEEecCCCEEeccccccccCCCCC-CCCCCCCCCCCCCCC-----
Q 046128          295 KNMRCTYRFILESMRMASIISFT-FREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFF-SEPQKVDPSRFKVAP-----  367 (435)
Q Consensus       295 ~~~p~l~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~-----  367 (435)
                      ++||||+|+|+|+||++|++++. .|.+.+|+.++||.|||||.|.++.+++||||++| |||++|+||||++..     
T Consensus       348 ~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~  427 (502)
T PLN02966        348 KNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKG  427 (502)
T ss_pred             cCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCCcCC
Confidence            99999999999999999999974 69999999999999999999999999999999999 999999999999742     


Q ss_pred             CCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCc
Q 046128          368 RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGS  410 (435)
Q Consensus       368 ~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~  410 (435)
                      ....++|||+|+|+|+|++||++|++++++.|+++|+|++.++
T Consensus       428 ~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~  470 (502)
T PLN02966        428 TDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNG  470 (502)
T ss_pred             CcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCC
Confidence            3558999999999999999999999999999999999998765


No 21 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=6.1e-71  Score=526.81  Aligned_cols=428  Identities=21%  Similarity=0.262  Sum_probs=329.6

Q ss_pred             CCCCCCCccccccccccccCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCc-cccccccc
Q 046128            1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYP-KSKEKIIG   79 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~-~~~~~~~g   79 (435)
                      +||||+++|++|+++.+....++..+.+|+++||+||++++|+.++|+++||+.+++++.++...|.++.. .....+.|
T Consensus        31 ~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~~g  110 (503)
T PLN02394         31 LPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTG  110 (503)
T ss_pred             CCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHhcc
Confidence            58999999999999887433357899999999999999999999999999999999999877665655432 22223333


Q ss_pred             --CCccccccchHHHHHHHHHH-hcCCHHHHhhhhHHHHHHHHHHHHHhhc-----CCccchHHHHHHHHHHHHHHHhhc
Q 046128           80 --PSALFFHQADYHARLRKLVQ-SSLSPERIKKLIPDIEAIAISALESCAV-----GQVINTFKEMKKFSFDVGILSIFG  151 (435)
Q Consensus        80 --~~~~~~~~g~~~~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~d~~~~~~~~~~~~~~~~~fG  151 (435)
                        ..+++..+|+.|+++|+.+. +.|+++.++.+.+.+++.++++++.+.+     ++.+|+.+.+..+++++++.++||
T Consensus       111 ~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~~~fG  190 (503)
T PLN02394        111 KGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYRMMFD  190 (503)
T ss_pred             CCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHHHHhC
Confidence              24467788999999999996 8899999999999999999999888753     335899999999999999999999


Q ss_pred             CCChHHH----HHHHHHHHHH---Hhcc-----ccccccCCc-chHHH-HHHHHHHHHH-HHHHHHHHHHhh-------c
Q 046128          152 NLDDSYR----EKLKQNYLIV---DKGY-----NSFPSNIPG-TAYHK-ALLARKRLSQ-IVSEIICERKEK-------R  209 (435)
Q Consensus       152 ~~~~~~~----~~~~~~~~~~---~~~~-----~~~~~~~p~-~~~~~-~~~~~~~~~~-~~~~~i~~~~~~-------~  209 (435)
                      .+.+...    ..+.......   ...+     ..++.+.+. ..+.+ .......... +....++++++.       .
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  270 (503)
T PLN02394        191 RRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKKLMSAKGMDK  270 (503)
T ss_pred             CCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCc
Confidence            8643211    1111111111   1110     011111111 01111 1111111122 223334444321       1


Q ss_pred             ccccchHHHhhcccccCCCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCC
Q 046128          210 LLEKDLLGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL  289 (435)
Q Consensus       210 ~~~~~~l~~ll~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~  289 (435)
                      ....|+++.+++..++  +.++++++..++..+++||+|||+++++|++++|++||++|+|+++|++++.+.    +..+
T Consensus       271 ~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~----~~~~  344 (503)
T PLN02394        271 EGLKCAIDHILEAQKK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGP----GNQV  344 (503)
T ss_pred             chhhhHHHHHHhcccc--CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC----CCCC
Confidence            2336899999986543  248999999999999999999999999999999999999999999999999752    3457


Q ss_pred             CHHhhhcCchhHHHHHHhhccccCcccc-eeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCCC-
Q 046128          290 TWAQTKNMRCTYRFILESMRMASIISFT-FREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAP-  367 (435)
Q Consensus       290 ~~~~l~~~p~l~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~-  367 (435)
                      +++++.+||||+|||+|+||++|+++.. .|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++.. 
T Consensus       345 ~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~  424 (503)
T PLN02394        345 TEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEA  424 (503)
T ss_pred             CHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCC
Confidence            8999999999999999999999999986 48889999999999999999999999999999999999999999998642 


Q ss_pred             ------CCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccC--Ccc--cC-CccCCCCCCceEEEecC
Q 046128          368 ------RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQN--GIQ--YG-PFPVPEKGLPARFWRVP  434 (435)
Q Consensus       368 ------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~--~~~--~~-~~~~~~~~~~v~~~~r~  434 (435)
                            ...+++|||+|+|+|+|+++|++|++++++.|+++|++++.++..  +..  ++ .....++++.+++.||+
T Consensus       425 ~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        425 KVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             cccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecCC
Confidence                  245799999999999999999999999999999999999876542  222  22 23446668999999996


No 22 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.1e-70  Score=525.96  Aligned_cols=429  Identities=20%  Similarity=0.289  Sum_probs=344.0

Q ss_pred             CCCCCCCccccccccccccCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCccc--ccccc
Q 046128            1 LPPGSMGWPFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKS--KEKII   78 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~~--~~~~~   78 (435)
                      +||||+++|++||++++ ..+++.++.+++++||++|++++++.++++++||+.+++++.++...|+++....  ....+
T Consensus        33 ~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~  111 (514)
T PLN03112         33 LPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAY  111 (514)
T ss_pred             CccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccceeecc
Confidence            58999999999999887 4678999999999999999999999999999999999999988776676653321  22234


Q ss_pred             cC-CccccccchHHHHHHHHHH-hcCCHHHHhhhhHHHHHHHHHHHHHhh----cCCccchHHHHHHHHHHHHHHHhhcC
Q 046128           79 GP-SALFFHQADYHARLRKLVQ-SSLSPERIKKLIPDIEAIAISALESCA----VGQVINTFKEMKKFSFDVGILSIFGN  152 (435)
Q Consensus        79 g~-~~~~~~~g~~~~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~d~~~~~~~~~~~~~~~~~fG~  152 (435)
                      |. .+++..+|+.|+++|+++. +.|+.++++.+.+.+.+.++++++.+.    .++++|+.+.+..+++++++.++||.
T Consensus       112 g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~  191 (514)
T PLN03112        112 GCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRMLLGK  191 (514)
T ss_pred             CCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHHHcCC
Confidence            42 3445678999999999964 689999999999999999998887642    35679999999999999999999998


Q ss_pred             CCh-------HHHHHHHHHHHHHHhccc------cccc--cC-CcchHHHHHHHHHHHHHHHHHHHHHHHhhc------c
Q 046128          153 LDD-------SYREKLKQNYLIVDKGYN------SFPS--NI-PGTAYHKALLARKRLSQIVSEIICERKEKR------L  210 (435)
Q Consensus       153 ~~~-------~~~~~~~~~~~~~~~~~~------~~~~--~~-p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~  210 (435)
                      +..       .....+......+.....      .+|.  ++ +....++..++.+.+.+++.+.++++++..      .
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  271 (514)
T PLN03112        192 QYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLPGG  271 (514)
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCC
Confidence            631       112233333333222111      1121  11 222234455667777778888887665431      2


Q ss_pred             cccchHHHhhcccccCC-CCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCC
Q 046128          211 LEKDLLGCLLNSRDEKG-RTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRAL  289 (435)
Q Consensus       211 ~~~~~l~~ll~~~~~~~-~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~  289 (435)
                      ...|+++.+++..++++ ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++.+.    ++.+
T Consensus       272 ~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~----~~~~  347 (514)
T PLN03112        272 KDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGR----NRMV  347 (514)
T ss_pred             ccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCC----CCcC
Confidence            23589999998644332 248999999999999999999999999999999999999999999999998742    3568


Q ss_pred             CHHhhhcCchhHHHHHHhhccccCccc-ceeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCCC-
Q 046128          290 TWAQTKNMRCTYRFILESMRMASIISF-TFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAP-  367 (435)
Q Consensus       290 ~~~~l~~~p~l~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~-  367 (435)
                      +++++++|||++|+|+|++|++|+++. +.|.+.+|+.++|+.|||||.|.++.+++||||++|+||++|+||||+... 
T Consensus       348 t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~  427 (514)
T PLN03112        348 QESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEG  427 (514)
T ss_pred             ChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCC
Confidence            999999999999999999999999997 469999999999999999999999999999999999999999999986521 


Q ss_pred             --------CCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCcc--CCcc----cCCccCCCCCCceEEEec
Q 046128          368 --------RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQ--NGIQ----YGPFPVPEKGLPARFWRV  433 (435)
Q Consensus       368 --------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~--~~~~----~~~~~~~~~~~~v~~~~r  433 (435)
                              ....++|||.|+|.|+|++||++|++++++.|+++|+|++.++.  +...    ++....+++++.++++||
T Consensus       428 ~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  507 (514)
T PLN03112        428 SRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPR  507 (514)
T ss_pred             CccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecC
Confidence                    23579999999999999999999999999999999999987542  1222    234556788999999998


Q ss_pred             C
Q 046128          434 P  434 (435)
Q Consensus       434 ~  434 (435)
                      .
T Consensus       508 ~  508 (514)
T PLN03112        508 L  508 (514)
T ss_pred             C
Confidence            5


No 23 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.1e-71  Score=489.67  Aligned_cols=425  Identities=22%  Similarity=0.348  Sum_probs=358.1

Q ss_pred             CCCCCccccccccccc---cCCchHHHHHHHHHhCCceEee-ecCccEEEEeChHHHHHHHhhcccc-ccc-cCc--ccc
Q 046128            3 PGSMGWPFIGETLQIY---SQDPNVFFATKQKRYGEIFKTH-ILGCPCVMLASPEAAKFVLATHAHF-FKP-TYP--KSK   74 (435)
Q Consensus         3 Pgp~~~p~lG~~~~~~---~~~~~~~~~~~~~~yG~v~~~~-~~~~~~vvi~~~~~v~~i~~~~~~~-~~~-~~~--~~~   74 (435)
                      |||+++|++|.++.+.   ..+-|+....++++||+||+.. +|+...|.+.||++++.++++++.. +.. .+.  ...
T Consensus        53 P~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~P~Rp~~~~~w~~~  132 (519)
T KOG0159|consen   53 PGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGKYPFRPLLIEPWVAY  132 (519)
T ss_pred             CCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCCCCCcccccchhhhh
Confidence            8899999999987421   2467888999999999999999 8889999999999999999988753 221 111  223


Q ss_pred             ccccc-CCccccccchHHHHHHHHHHhc-CCHHHHhhhhHHHHHHHHHHHHHhhc-------CCccchHHHHHHHHHHHH
Q 046128           75 EKIIG-PSALFFHQADYHARLRKLVQSS-LSPERIKKLIPDIEAIAISALESCAV-------GQVINTFKEMKKFSFDVG  145 (435)
Q Consensus        75 ~~~~g-~~~~~~~~g~~~~~~R~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~d~~~~~~~~~~~~~  145 (435)
                      ++.++ ..|+++.+|+.|.+.|..+++. +.++.++.|.+.+++.++++++.+..       ..+.|+.+.+.+.+++.+
T Consensus       133 rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wslEsi  212 (519)
T KOG0159|consen  133 RDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSLESI  212 (519)
T ss_pred             HHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHH
Confidence            34454 5789999999999999999986 78999999999999999999887642       236799999999999999


Q ss_pred             HHHhhcCCC-------hHHHHHHHHHHHHHHhccc------cccccCCcchHHHHHHHHHHHHHHHHHHHHHHHhh----
Q 046128          146 ILSIFGNLD-------DSYREKLKQNYLIVDKGYN------SFPSNIPGTAYHKALLARKRLSQIVSEIICERKEK----  208 (435)
Q Consensus       146 ~~~~fG~~~-------~~~~~~~~~~~~~~~~~~~------~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~----  208 (435)
                      |.++||.+.       ++....+..+...+.....      .+..+++...|++..++.+.+.+.....|++..+.    
T Consensus       213 ~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l~~l~~~  292 (519)
T KOG0159|consen  213 CLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNALEELEKQ  292 (519)
T ss_pred             HHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999853       2444455555544443211      12234788889999999999999999888877654    


Q ss_pred             cc---cccchHHHhhcccccCCCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCC
Q 046128          209 RL---LEKDLLGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGG  285 (435)
Q Consensus       209 ~~---~~~~~l~~ll~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~  285 (435)
                      ..   .....+..++..+     .++.+++..+++.+++||.|||+.++.|+||+|++||++|++|++|+.++...   .
T Consensus       293 ~~~~~~~~~~l~~~L~~~-----~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~---~  364 (519)
T KOG0159|consen  293 DSAGSEYTGSLLELLLRK-----ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPS---G  364 (519)
T ss_pred             cccccchhHHHHHHHHHc-----cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCC---c
Confidence            11   1123444444332     38999999999999999999999999999999999999999999999998753   3


Q ss_pred             CCCCCHHhhhcCchhHHHHHHhhccccCcccceeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCC
Q 046128          286 QRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKV  365 (435)
Q Consensus       286 ~~~~~~~~l~~~p~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  365 (435)
                      +..++.+++.+||||.|||||++||||.+++..|+..+|..++||.|||||.|.++.+.+.+||++|++|++|+|||||+
T Consensus       365 ~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~  444 (519)
T KOG0159|consen  365 NSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLK  444 (519)
T ss_pred             ccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhcc
Confidence            56788999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             C----CCCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcC-ccCCcccCCccCCCCCCceEEEecCC
Q 046128          366 A----PRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVG-SQNGIQYGPFPVPEKGLPARFWRVPC  435 (435)
Q Consensus       366 ~----~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~r~~  435 (435)
                      .    .++..++|||.|+|+|+|+++|++||.++|+.|+++|+++..+ .+.+..+..++.|..++.++|++|.+
T Consensus       445 ~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~~~~~il~P~~~l~f~f~~r~~  519 (519)
T KOG0159|consen  445 PSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEYVYRFILVPNRPLRFKFRPRNE  519 (519)
T ss_pred             cccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccceeEEEEcCCCCcceeeeeCCC
Confidence            6    4688999999999999999999999999999999999999987 46677778899999999999999975


No 24 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=5.9e-71  Score=522.61  Aligned_cols=420  Identities=17%  Similarity=0.249  Sum_probs=325.9

Q ss_pred             CCCCCccccccccccccCCc--hHHHHHHHHHhCCceE---eeecCccEEEEeChHHHHHHHhhccccccccCc-ccccc
Q 046128            3 PGSMGWPFIGETLQIYSQDP--NVFFATKQKRYGEIFK---THILGCPCVMLASPEAAKFVLATHAHFFKPTYP-KSKEK   76 (435)
Q Consensus         3 Pgp~~~p~lG~~~~~~~~~~--~~~~~~~~~~yG~v~~---~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~-~~~~~   76 (435)
                      |||+++|++||+..+.....  .+++.+..++||..++   .++|+.++++++||+.+++|+.++...|.++.. .....
T Consensus        34 p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~~  113 (500)
T PLN02169         34 PILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKIFD  113 (500)
T ss_pred             CCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHHHH
Confidence            78999999999987653322  2333444445887666   577899999999999999999887665655432 22334


Q ss_pred             cccCCccccccchHHHHHHHHHHhcCCHHHHhhh--hHHHHHHHHHHHHHhh----cCCccchHHHHHHHHHHHHHHHhh
Q 046128           77 IIGPSALFFHQADYHARLRKLVQSSLSPERIKKL--IPDIEAIAISALESCA----VGQVINTFKEMKKFSFDVGILSIF  150 (435)
Q Consensus        77 ~~g~~~~~~~~g~~~~~~R~~l~~~~~~~~~~~~--~~~~~~~~~~~l~~~~----~~~~~d~~~~~~~~~~~~~~~~~f  150 (435)
                      ++| .++++++|+.|+++||++++.|+...+..+  .+.+.+.++.+++.+.    .+..+|+.+.+.++++++++.++|
T Consensus       114 ~~g-~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~f  192 (500)
T PLN02169        114 VLG-EGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSILMT  192 (500)
T ss_pred             hhc-CcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhhee
Confidence            556 789999999999999999999998877542  2445555555555443    346799999999999999999999


Q ss_pred             cCCChHH-----HHHHHHHHHHHHhcc---cccc-------ccCCcchHHHHHHHHHHHHHHHHHHHHHHHhhc------
Q 046128          151 GNLDDSY-----REKLKQNYLIVDKGY---NSFP-------SNIPGTAYHKALLARKRLSQIVSEIICERKEKR------  209 (435)
Q Consensus       151 G~~~~~~-----~~~~~~~~~~~~~~~---~~~~-------~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------  209 (435)
                      |.+.+..     ...+...+.......   ...|       .+++....++..++.+.+.+++.+.|+++++..      
T Consensus       193 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~~  272 (500)
T PLN02169        193 GYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRAET  272 (500)
T ss_pred             CCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            9854321     112222222111100   0111       122223345567788888999999998876531      


Q ss_pred             -ccccchHHHhhcccccC---CCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCC
Q 046128          210 -LLEKDLLGCLLNSRDEK---GRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGG  285 (435)
Q Consensus       210 -~~~~~~l~~ll~~~~~~---~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~  285 (435)
                       ...+|+++.+++....+   +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++       
T Consensus       273 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v-------  345 (500)
T PLN02169        273 EPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTK-------  345 (500)
T ss_pred             cCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh-------
Confidence             11368999998753221   2247899999999999999999999999999999999999999999999876       


Q ss_pred             CCCCCHHhhhcCchhHHHHHHhhccccCcccceeeeeccccc-cCEEecCCCEEeccccccccCCCCC-CCCCCCCCCCC
Q 046128          286 QRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEY-KGFLIPKGWKVMPLFRNIHHNSEFF-SEPQKVDPSRF  363 (435)
Q Consensus       286 ~~~~~~~~l~~~p~l~a~i~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~  363 (435)
                         ++.+++.+||||+|||+|+||++|++|...|.+.+|..+ +|+.|||||.|+++.+++||||++| +||++|+||||
T Consensus       346 ---~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRf  422 (500)
T PLN02169        346 ---FDNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERW  422 (500)
T ss_pred             ---CCHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCcccc
Confidence               467999999999999999999999999988888777665 9999999999999999999999999 89999999999


Q ss_pred             CCCC------CCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCcc-CCcccCCccCCCCCCceEEEec
Q 046128          364 KVAP------RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQ-NGIQYGPFPVPEKGLPARFWRV  433 (435)
Q Consensus       364 l~~~------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~r  433 (435)
                      +++.      ++..|+|||+|+|+|+|++||++|++++++.|+++|++++.++. .......+++|++++.|++++|
T Consensus       423 l~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        423 ISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIEAIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             CCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCcccccceEEecCCCEEEEEEeC
Confidence            9641      25689999999999999999999999999999999999997653 2223456779999999999987


No 25 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=7.8e-70  Score=516.68  Aligned_cols=430  Identities=18%  Similarity=0.276  Sum_probs=328.0

Q ss_pred             CCCCCCCccccccccccccCCch-HHHHHHHHHh-CCceEeeecCccEEEEeChHHHHHHHhhccccccccCcccccccc
Q 046128            1 LPPGSMGWPFIGETLQIYSQDPN-VFFATKQKRY-GEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYPKSKEKII   78 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~~~~~~-~~~~~~~~~y-G~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~~~~~~~~   78 (435)
                      +||||+++|++||++++...++. .++..+.++| |+||++++|+.++|+++||+.+++++.++...|+++........+
T Consensus        41 ~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l  120 (534)
T PLN03018         41 LPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMETI  120 (534)
T ss_pred             CCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhh
Confidence            69999999999999987533443 4566667766 799999999999999999999999999877767776532222223


Q ss_pred             cC--Cccccc-cchHHHHHHHHHHhcCCHHHHhh-hhHHHHHHHHHHHHHhh----cCCccchHHHHHHHHHHHHHHHhh
Q 046128           79 GP--SALFFH-QADYHARLRKLVQSSLSPERIKK-LIPDIEAIAISALESCA----VGQVINTFKEMKKFSFDVGILSIF  150 (435)
Q Consensus        79 g~--~~~~~~-~g~~~~~~R~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~~----~~~~~d~~~~~~~~~~~~~~~~~f  150 (435)
                      +.  .++++. +|+.|+++|+++++.|....... +.+.....++++++.+.    .++++|+.+.+..+++++++.++|
T Consensus       121 ~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~f  200 (534)
T PLN03018        121 GDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRMLF  200 (534)
T ss_pred             ccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHHHh
Confidence            42  245554 59999999999999865444433 44455555666766654    245799999999999999999999


Q ss_pred             cCCChH----------HHHHHHHHHHHHHhcccc---------ccccCC----cchHHHHHHHHHHHHHHHHHHHHHHHh
Q 046128          151 GNLDDS----------YREKLKQNYLIVDKGYNS---------FPSNIP----GTAYHKALLARKRLSQIVSEIICERKE  207 (435)
Q Consensus       151 G~~~~~----------~~~~~~~~~~~~~~~~~~---------~~~~~p----~~~~~~~~~~~~~~~~~~~~~i~~~~~  207 (435)
                      |.+...          ....+......+...+..         ++.++.    .....+.......+.+++.+.++++++
T Consensus       201 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  280 (534)
T PLN03018        201 GRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDERVE  280 (534)
T ss_pred             CCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            986321          001111111111111111         111111    011223334455667777777777654


Q ss_pred             h----cc--cccchHHHhhcccccCCC-CCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHh
Q 046128          208 K----RL--LEKDLLGCLLNSRDEKGR-TLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHE  280 (435)
Q Consensus       208 ~----~~--~~~~~l~~ll~~~~~~~~-~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~  280 (435)
                      .    ..  ...|+++.+++..++++. .+++++++.++.++++||+|||+++++|++++|+.||++|+|+++|++++++
T Consensus       281 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~  360 (534)
T PLN03018        281 LWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVG  360 (534)
T ss_pred             HhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC
Confidence            2    11  236899999976544332 4899999999999999999999999999999999999999999999999974


Q ss_pred             hcCCCCCCCCHHhhhcCchhHHHHHHhhccccCcccc-eeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCC
Q 046128          281 SNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFT-FREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVD  359 (435)
Q Consensus       281 ~~~~~~~~~~~~~l~~~p~l~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~  359 (435)
                      .    ...++.+++.+||||+|||+|+||++|+++.. .|++.+|+.++||.|||||.|+++.+++||||++|+||++|+
T Consensus       361 ~----~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~  436 (534)
T PLN03018        361 K----DRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYE  436 (534)
T ss_pred             C----CCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccC
Confidence            2    45689999999999999999999999999986 499999999999999999999999999999999999999999


Q ss_pred             CCCCCCCC----------CCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccCCccc---CCccCCCCCC
Q 046128          360 PSRFKVAP----------RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNGIQY---GPFPVPEKGL  426 (435)
Q Consensus       360 P~R~l~~~----------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~---~~~~~~~~~~  426 (435)
                      ||||++..          ....++|||.|+|.|+|+++|.+|+++++++|+++|++++.++......   ..++..++++
T Consensus       437 PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~  516 (534)
T PLN03018        437 PERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLLMAKPL  516 (534)
T ss_pred             CccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCccccccceecCCCe
Confidence            99999642          2357999999999999999999999999999999999998765322211   1334456789


Q ss_pred             ceEEEecC
Q 046128          427 PARFWRVP  434 (435)
Q Consensus       427 ~v~~~~r~  434 (435)
                      .|++++|.
T Consensus       517 ~v~~~~R~  524 (534)
T PLN03018        517 LLSVEPRL  524 (534)
T ss_pred             EEEEEecc
Confidence            99999984


No 26 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.9e-70  Score=524.11  Aligned_cols=430  Identities=16%  Similarity=0.231  Sum_probs=332.8

Q ss_pred             CCCCCCccccccccccccCCchHHHHHHHHHh---CCceEeeecCccEEEEeChHHHHHHHhhccccccccCc--ccccc
Q 046128            2 PPGSMGWPFIGETLQIYSQDPNVFFATKQKRY---GEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYP--KSKEK   76 (435)
Q Consensus         2 PPgp~~~p~lG~~~~~~~~~~~~~~~~~~~~y---G~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~--~~~~~   76 (435)
                      ||||+++|++||+++++ .+ +..+.+|.++|   |++|++++++.++++++||+.+++|+.++...|.+...  .....
T Consensus        32 ~pgp~~~p~~G~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~  109 (516)
T PLN03195         32 RKGPKSWPIIGAALEQL-KN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEV  109 (516)
T ss_pred             cCCCCCCCeecchHHHH-hc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHH
Confidence            69999999999988764 33 44566777777   89999999999999999999999999865443443311  12223


Q ss_pred             cccCCccccccchHHHHHHHHHHhcCCHHHHhhhhHHH-HHHHHHHHHHhh----cCCccchHHHHHHHHHHHHHHHhhc
Q 046128           77 IIGPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDI-EAIAISALESCA----VGQVINTFKEMKKFSFDVGILSIFG  151 (435)
Q Consensus        77 ~~g~~~~~~~~g~~~~~~R~~l~~~~~~~~~~~~~~~~-~~~~~~~l~~~~----~~~~~d~~~~~~~~~~~~~~~~~fG  151 (435)
                      ++| .+++..+|+.|+++||++++.|+..+++.+.+.+ .+.++.+++.+.    .++.+|+.+++..+++++++.++||
T Consensus       110 ~~g-~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG  188 (516)
T PLN03195        110 LLG-DGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGFG  188 (516)
T ss_pred             Hhc-CeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHhC
Confidence            445 5678889999999999999999999999988865 554555544432    3567999999999999999999999


Q ss_pred             CCChHHH-----HHHHHHHHHHHhcc--ccc-cc-----cCCcchHHHHHHHHHHHHHHHHHHHHHHHhhc--------c
Q 046128          152 NLDDSYR-----EKLKQNYLIVDKGY--NSF-PS-----NIPGTAYHKALLARKRLSQIVSEIICERKEKR--------L  210 (435)
Q Consensus       152 ~~~~~~~-----~~~~~~~~~~~~~~--~~~-~~-----~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~  210 (435)
                      .+.+...     ..+...+.......  ..+ +.     +++....++..++...+.+++.+.+++++++.        .
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  268 (516)
T PLN03195        189 VEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKSGKK  268 (516)
T ss_pred             CCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            8643211     12222222211100  000 11     11111123334566777778888887765431        1


Q ss_pred             cccchHHHhhcccccCCCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhc--------
Q 046128          211 LEKDLLGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESN--------  282 (435)
Q Consensus       211 ~~~~~l~~ll~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~--------  282 (435)
                      ...|+++.+++..++++..+++++++.++.++++||+|||+++++|++++|++||++|+|+++|++++....        
T Consensus       269 ~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~  348 (516)
T PLN03195        269 VKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPED  348 (516)
T ss_pred             ccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccc
Confidence            246899999976544344699999999999999999999999999999999999999999999999886431        


Q ss_pred             --------CCCCCCCCHHhhhcCchhHHHHHHhhccccCcccceeeeeccccc-cCEEecCCCEEeccccccccCCCCC-
Q 046128          283 --------NGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEY-KGFLIPKGWKVMPLFRNIHHNSEFF-  352 (435)
Q Consensus       283 --------~~~~~~~~~~~l~~~p~l~a~i~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~g~~v~~~~~~~~~d~~~~-  352 (435)
                              .+.+..++++++.+||||+|||+|+||++|+++...|.+.+|..+ +|+.|||||.|.++.+++||||++| 
T Consensus       349 ~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g  428 (516)
T PLN03195        349 SQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWG  428 (516)
T ss_pred             cchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhc
Confidence                    001345899999999999999999999999999888878887666 9999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCCC-----CCCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCcc-CCcccCCccCCCCCC
Q 046128          353 SEPQKVDPSRFKVA-----PRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQ-NGIQYGPFPVPEKGL  426 (435)
Q Consensus       353 ~~p~~F~P~R~l~~-----~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~  426 (435)
                      +||++|+||||++.     ..+..++|||+|+|+|+|++||++|++++++.|+++|++++.++. .......+..|+.++
T Consensus       429 ~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  508 (516)
T PLN03195        429 PDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKYRMMTILSMANGL  508 (516)
T ss_pred             cChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcceeeeeeEEecCCCE
Confidence            99999999999963     234579999999999999999999999999999999999987543 222233457899999


Q ss_pred             ceEEEecC
Q 046128          427 PARFWRVP  434 (435)
Q Consensus       427 ~v~~~~r~  434 (435)
                      +|++++|+
T Consensus       509 ~v~~~~r~  516 (516)
T PLN03195        509 KVTVSRRS  516 (516)
T ss_pred             EEEEEeCC
Confidence            99999985


No 27 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=7.9e-70  Score=521.99  Aligned_cols=415  Identities=19%  Similarity=0.293  Sum_probs=326.9

Q ss_pred             cccccccccCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCc-ccccccccCCccccccch
Q 046128           11 IGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYP-KSKEKIIGPSALFFHQAD   89 (435)
Q Consensus        11 lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~   89 (435)
                      +||+..+.+...+..+.+|+++|||||++++|+.++++|+||+.+++|+.++...|.+... .......| .+++..+|+
T Consensus       142 ~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g-~~l~~~dge  220 (633)
T PLN02738        142 KGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMG-KGLIPADGE  220 (633)
T ss_pred             cCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccC-CceecCCcH
Confidence            4554444334566889999999999999999988899999999999999877665655432 12222344 677788999


Q ss_pred             HHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhhc----CCccchHHHHHHHHHHHHHHHhhcCCChH------HHH
Q 046128           90 YHARLRKLVQSSLSPERIKKLIPDIEAIAISALESCAV----GQVINTFKEMKKFSFDVGILSIFGNLDDS------YRE  159 (435)
Q Consensus        90 ~~~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~d~~~~~~~~~~~~~~~~~fG~~~~~------~~~  159 (435)
                      .|+.+|+.+.+.|+...+..+.+.+.+.++++++.+..    ++.+|+.+.+..+++++++..+||.+.+.      ...
T Consensus       221 ~wr~rRr~l~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~  300 (633)
T PLN02738        221 IWRVRRRAIVPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVE  300 (633)
T ss_pred             HHHHHHHhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHH
Confidence            99999999999999999999999999999999888742    56899999999999999999999986442      111


Q ss_pred             HHHHHHHHHHh-cccccccc-CCc-----chHHHHHHHHHHHHHHHHHHHHHHHhh-------------cccccchHHHh
Q 046128          160 KLKQNYLIVDK-GYNSFPSN-IPG-----TAYHKALLARKRLSQIVSEIICERKEK-------------RLLEKDLLGCL  219 (435)
Q Consensus       160 ~~~~~~~~~~~-~~~~~~~~-~p~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~-------------~~~~~~~l~~l  219 (435)
                      .+...+..+.. ....++.| +|.     ...++..++.+.+...+.+.++..++.             .....++++.|
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~L  380 (633)
T PLN02738        301 AVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFL  380 (633)
T ss_pred             HHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHH
Confidence            12222221111 11111111 111     011233334444444455444432210             11235788888


Q ss_pred             hcccccCCCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHhhhcCch
Q 046128          220 LNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRC  299 (435)
Q Consensus       220 l~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~l~~~p~  299 (435)
                      ++..    ..++++++.+++..+++||+|||+++++|++++|++||++|+|||+|++++++     +..++++++++|||
T Consensus       381 l~~~----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-----~~~~t~edL~kLPY  451 (633)
T PLN02738        381 LASG----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-----DRFPTIEDMKKLKY  451 (633)
T ss_pred             HHcC----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-----CCCCCHHHHccCHH
Confidence            8753    24899999999999999999999999999999999999999999999999974     35679999999999


Q ss_pred             hHHHHHHhhccccCcccceeeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCC-------CCCCCc
Q 046128          300 TYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVA-------PRPNTF  372 (435)
Q Consensus       300 l~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~-------~~~~~~  372 (435)
                      |+|||+|+|||+|+++.+.|++.+|+.++||.|||||.|.++.+.+||||++||||++|+||||+..       .....+
T Consensus       452 L~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~  531 (633)
T PLN02738        452 TTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSY  531 (633)
T ss_pred             HHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCce
Confidence            9999999999999999988999999999999999999999999999999999999999999999842       134579


Q ss_pred             cccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccCCcc--cCCccCCCCCCceEEEecCC
Q 046128          373 VPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNGIQ--YGPFPVPEKGLPARFWRVPC  435 (435)
Q Consensus       373 ~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~r~~  435 (435)
                      +|||.|+|.|+|++||++|++++++.|+++|+|++.++.....  ...+..|++++++++++|.+
T Consensus       532 vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        532 LPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             eCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEECCC
Confidence            9999999999999999999999999999999999987643233  24577899999999999963


No 28 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8.2e-70  Score=469.46  Aligned_cols=429  Identities=28%  Similarity=0.475  Sum_probs=361.7

Q ss_pred             CCCCCCc-cccccccccccCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccc--cccccCcccccccc
Q 046128            2 PPGSMGW-PFIGETLQIYSQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAH--FFKPTYPKSKEKII   78 (435)
Q Consensus         2 PPgp~~~-p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~--~~~~~~~~~~~~~~   78 (435)
                      ||--++| |++|++..| +++|.+++++.++|||+||++.++|+.+.++.+|+....+++.+..  ++...+.......+
T Consensus        33 PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~vF  111 (486)
T KOG0684|consen   33 PPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPVF  111 (486)
T ss_pred             CcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhhc
Confidence            6766665 999999998 7999999999999999999999999999999999999999988733  34444446778888


Q ss_pred             cCCccccccchHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHH-hhcCCccchHHHHHHH-HHHHHHHHhhcCCChH
Q 046128           79 GPSALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALES-CAVGQVINTFKEMKKF-SFDVGILSIFGNLDDS  156 (435)
Q Consensus        79 g~~~~~~~~g~~~~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~d~~~~~~~~-~~~~~~~~~fG~~~~~  156 (435)
                      |+......++....++.+++...+....++++.+.+.+.+.+.++. |.+++..|....+.+. .+.+.-..++|+....
T Consensus       112 g~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~s~~~d~l~~~~~~ii~tAs~~ll~~e~r~~  191 (486)
T KOG0684|consen  112 GKGVVYDVPNHVMMEQKKFFKSALGGVALKSLVELMLEELHAYFETSLGESGETDGLYTFCRLIIFTASRLLLGGEVRDQ  191 (486)
T ss_pred             CCCccccCCCchHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhcccccccchhHhhhhhHHHhhhhHHHhhhhhhhhh
Confidence            8555666788899999999999999999999999999999998887 6555556655444444 4444444455554344


Q ss_pred             HHHHHHHHHHHHHhcccc----ccccCCcchHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccchHHHhhcccccCCCCCC
Q 046128          157 YREKLKQNYLIVDKGYNS----FPSNIPGTAYHKALLARKRLSQIVSEIICERKEKR-LLEKDLLGCLLNSRDEKGRTLT  231 (435)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~l~~ll~~~~~~~~~l~  231 (435)
                      ...+....+.++...+..    +|.++|....++..++++.+.+.+...+.++++.. ...+|++..+++ ...++...+
T Consensus       192 ~d~~~a~l~~dLd~~F~~~d~~FP~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~~~~dmlq~l~~-~y~dg~~~t  270 (486)
T KOG0684|consen  192 LDADVAKLYHDLDQGFQPFDFLFPYNLPIPLLRRRDRARKKISKIFSKIILDRRASISKWDNDMLQSLME-KYKDGRPTT  270 (486)
T ss_pred             hcchHHHHHHHHhccccchHhhcccCCCcchhhhHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHH-HhhcCCcCc
Confidence            344455556666665544    44467777788888999999999999999998875 455699999988 455667799


Q ss_pred             HHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHhhhcCchhHHHHHHhhccc
Q 046128          232 EDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMA  311 (435)
Q Consensus       232 ~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~l~~~p~l~a~i~E~lRl~  311 (435)
                      ++|++..++.+++||..|++.+.+|++++|++|||+++++++|+.++++.   ...+++.+++++||.|++||+|||||+
T Consensus       271 e~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~---~~~~l~~d~L~~lplL~~~IkEtLRL~  347 (486)
T KOG0684|consen  271 EEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGE---KKEKLTYDQLKDLPLLDSCIKETLRLH  347 (486)
T ss_pred             HHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc---cCCCCCHHHHhcchHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999965   234599999999999999999999999


Q ss_pred             cCcccceeeeeccccccC----EEecCCCEEeccccccccCCCCCCCCCCCCCCCCCCCCC---------CCCccccCCC
Q 046128          312 SIISFTFREAVCDVEYKG----FLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPR---------PNTFVPFGLG  378 (435)
Q Consensus       312 p~~~~~~r~~~~d~~~~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~---------~~~~~~Fg~G  378 (435)
                      ||.+.+.|.+.+|.++.+    |.||+|..|.++.+.+||||++|+||+.|+||||+++..         ...+||||+|
T Consensus       348 ~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaG  427 (486)
T KOG0684|consen  348 PPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAG  427 (486)
T ss_pred             CchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCC
Confidence            999989999999999966    999999999999999999999999999999999997522         1246999999


Q ss_pred             ccCCCChHHHHHHHHHHHHHHHhcCeeEEcCc-cCCccc-CCccCCCCCCceEEEecCC
Q 046128          379 VHACPGNELAKLEMLILIHHLVTEFRWEVVGS-QNGIQY-GPFPVPEKGLPARFWRVPC  435 (435)
Q Consensus       379 ~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~~~~r~~  435 (435)
                      .|.|||+.||.+|+++++..+|++||+++.++ .....+ ..+..|..++++++++|+.
T Consensus       428 r~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~~P~g~v~irYK~R~~  486 (486)
T KOG0684|consen  428 RHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVMQPEGDVRIRYKRRPL  486 (486)
T ss_pred             cCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhcCCCCCceEEEeecCC
Confidence            99999999999999999999999999999984 344444 4588999999999999973


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=3.3e-68  Score=503.96  Aligned_cols=421  Identities=23%  Similarity=0.312  Sum_probs=333.8

Q ss_pred             CCCCccccccccccc----cCCchHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhccccccccCc-ccccccc
Q 046128            4 GSMGWPFIGETLQIY----SQDPNVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYP-KSKEKII   78 (435)
Q Consensus         4 gp~~~p~lG~~~~~~----~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~-~~~~~~~   78 (435)
                      |..|||++|+.+++.    +..++..+.+|+++||++|++++|+.++++++||+++++|+.+....|.+... .....++
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~~   95 (489)
T PLN02936         16 DDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFLF   95 (489)
T ss_pred             CCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHHh
Confidence            567899999988753    35678899999999999999999999999999999999999876555655432 2222345


Q ss_pred             cCCccccccchHHHHHHHHHHhcCCHHHHhhhhH-HHHHHHHHHHHHhh----cCCccchHHHHHHHHHHHHHHHhhcCC
Q 046128           79 GPSALFFHQADYHARLRKLVQSSLSPERIKKLIP-DIEAIAISALESCA----VGQVINTFKEMKKFSFDVGILSIFGNL  153 (435)
Q Consensus        79 g~~~~~~~~g~~~~~~R~~l~~~~~~~~~~~~~~-~~~~~~~~~l~~~~----~~~~~d~~~~~~~~~~~~~~~~~fG~~  153 (435)
                      | .++++.+|+.|+++|+++++.|+...+..+.+ .+.+.++++++.+.    .++++|+.+++..+++++++.++||.+
T Consensus        96 ~-~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~fG~~  174 (489)
T PLN02936         96 G-SGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVFNYN  174 (489)
T ss_pred             c-CccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHcCCC
Confidence            5 67788999999999999999999988887755 66777777777653    256899999999999999999999987


Q ss_pred             ChHH------HHHHHHHHHHHHh-cccccccc-CC-----cchHHHHHHHHHHHHHHHHHHHHHHHhh----c-------
Q 046128          154 DDSY------REKLKQNYLIVDK-GYNSFPSN-IP-----GTAYHKALLARKRLSQIVSEIICERKEK----R-------  209 (435)
Q Consensus       154 ~~~~------~~~~~~~~~~~~~-~~~~~~~~-~p-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~-------  209 (435)
                      .+..      ...+...+..... ....+|.+ .+     ....++..++.+.+.+.+.+.++++++.    .       
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~  254 (489)
T PLN02936        175 FDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGEE  254 (489)
T ss_pred             ccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence            5421      1111111111110 11111211 00     1123456667777788888877765532    0       


Q ss_pred             ---ccccchHHHhhcccccCCCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCC
Q 046128          210 ---LLEKDLLGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQ  286 (435)
Q Consensus       210 ---~~~~~~l~~ll~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~  286 (435)
                         ....++++.|++..+    .++++++..++..+++||+|||+++++|++++|++||++|+++++|++.+++     .
T Consensus       255 ~~~~~~~d~l~~ll~~~~----~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~-----~  325 (489)
T PLN02936        255 YVNDSDPSVLRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQ-----G  325 (489)
T ss_pred             ccccCchHHHHHHHhccc----cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhc-----C
Confidence               123578888887543    3899999999999999999999999999999999999999999999999874     2


Q ss_pred             CCCCHHhhhcCchhHHHHHHhhccccCcccce-eeeeccccccCEEecCCCEEeccccccccCCCCCCCCCCCCCCCCCC
Q 046128          287 RALTWAQTKNMRCTYRFILESMRMASIISFTF-REAVCDVEYKGFLIPKGWKVMPLFRNIHHNSEFFSEPQKVDPSRFKV  365 (435)
Q Consensus       287 ~~~~~~~l~~~p~l~a~i~E~lRl~p~~~~~~-r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  365 (435)
                      ..++++++.+||||+|||+|+||++|+++... |.+.+|+.++|+.||||+.|+++.+++||||++|+||++|+||||+.
T Consensus       326 ~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~  405 (489)
T PLN02936        326 RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDL  405 (489)
T ss_pred             CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCC
Confidence            34789999999999999999999999998766 54566777899999999999999999999999999999999999995


Q ss_pred             CC-------CCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccC-CcccCCccCCCCCCceEEEecC
Q 046128          366 AP-------RPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQN-GIQYGPFPVPEKGLPARFWRVP  434 (435)
Q Consensus       366 ~~-------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~r~  434 (435)
                      ..       ....++|||.|+|.|+|++||++|++++++.|+++|++++.++.+ ......+.+|+++++|++++|.
T Consensus       406 ~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~  482 (489)
T PLN02936        406 DGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVMTTGATIHTTNGLYMTVSRRR  482 (489)
T ss_pred             CCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccceecceEEeeCCCeEEEEEeee
Confidence            32       134899999999999999999999999999999999999987643 2222456778999999999984


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=4.4e-65  Score=481.75  Aligned_cols=414  Identities=22%  Similarity=0.292  Sum_probs=326.5

Q ss_pred             ccccccccccccCCchHHHHHHHHHhC-CceEeeecCccEEEEeChHHHHHHHhhccccccccCc--ccccccccCCccc
Q 046128            8 WPFIGETLQIYSQDPNVFFATKQKRYG-EIFKTHILGCPCVMLASPEAAKFVLATHAHFFKPTYP--KSKEKIIGPSALF   84 (435)
Q Consensus         8 ~p~lG~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvi~~~~~v~~i~~~~~~~~~~~~~--~~~~~~~g~~~~~   84 (435)
                      .++.|+....+ .+.+.++..+.++++ .+++++..+.  ++++||+.+++|+..+...|.+...  ..+..++| .+++
T Consensus        49 ~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g-~gi~  124 (502)
T PLN02426         49 AYLTASWAKDF-DNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG-RGIF  124 (502)
T ss_pred             CCccHHHHHhc-ccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC-Ccee
Confidence            46788876653 456778877888887 5788876554  8999999999999876555654322  23445567 6888


Q ss_pred             cccchHHHHHHHHHHhcCCHHHHhhhh--HHHHHHHHHHHHHhhc------CCccchHHHHHHHHHHHHHHHhhcCCChH
Q 046128           85 FHQADYHARLRKLVQSSLSPERIKKLI--PDIEAIAISALESCAV------GQVINTFKEMKKFSFDVGILSIFGNLDDS  156 (435)
Q Consensus        85 ~~~g~~~~~~R~~l~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~------~~~~d~~~~~~~~~~~~~~~~~fG~~~~~  156 (435)
                      +.+|+.|+++||++++.|+...+..+.  +.+.+..+.+++.+.+      ++++|+.++++.+++++++.+.||.+.+.
T Consensus       125 ~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~  204 (502)
T PLN02426        125 NVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGC  204 (502)
T ss_pred             ecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCcc
Confidence            999999999999999999998888764  4555655556554421      35799999999999999999999986432


Q ss_pred             H-----HHHHHHHHHHHHh----c-ccccc------ccCCcchHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccchHHHh
Q 046128          157 Y-----REKLKQNYLIVDK----G-YNSFP------SNIPGTAYHKALLARKRLSQIVSEIICERKEKR-LLEKDLLGCL  219 (435)
Q Consensus       157 ~-----~~~~~~~~~~~~~----~-~~~~~------~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~l~~l  219 (435)
                      .     ...+...+..+..    . +..++      .+++....++..++.+.+.+++.+.|+++++.. ....|+++.+
T Consensus       205 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~dll~~l  284 (502)
T PLN02426        205 LELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGFSASKDLLSRF  284 (502)
T ss_pred             cCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcccCCcchHHHHH
Confidence            1     1122222222111    0 11111      112222345566778888899999998877542 2347999999


Q ss_pred             hcccccCCCCCCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHhhhcCch
Q 046128          220 LNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRC  299 (435)
Q Consensus       220 l~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~l~~~p~  299 (435)
                      ++..      .+++++..++.++++||+|||+++++|++++|++||++|+|+++|++++.+.   ....++++++++|||
T Consensus       285 l~~~------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~---~~~~~t~~~l~~LpY  355 (502)
T PLN02426        285 MASI------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGP---NQEAASFEEMKEMHY  355 (502)
T ss_pred             HhcC------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCC---CCCCCCHHHHhcChH
Confidence            9763      3788999999999999999999999999999999999999999999988643   234689999999999


Q ss_pred             hHHHHHHhhccccCcccceeeeeccccc-cCEEecCCCEEeccccccccCCCCC-CCCCCCCCCCCCCC-----CCCCCc
Q 046128          300 TYRFILESMRMASIISFTFREAVCDVEY-KGFLIPKGWKVMPLFRNIHHNSEFF-SEPQKVDPSRFKVA-----PRPNTF  372 (435)
Q Consensus       300 l~a~i~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~-----~~~~~~  372 (435)
                      |+|||+|+||++||++...|++.+|+.+ +|+.|||||.|.++.+++||||++| +||++|+||||++.     ..+..+
T Consensus       356 l~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~  435 (502)
T PLN02426        356 LHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKY  435 (502)
T ss_pred             HHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCccc
Confidence            9999999999999999888999998887 8999999999999999999999999 99999999999973     234579


Q ss_pred             cccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccC---CcccCCccCCCCCCceEEEecC
Q 046128          373 VPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQN---GIQYGPFPVPEKGLPARFWRVP  434 (435)
Q Consensus       373 ~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~r~  434 (435)
                      +|||+|+|.|+|+++|++|++++++.|+++|++++.++..   ....+.+.+|+++++|++++|.
T Consensus       436 ~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        436 PVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence            9999999999999999999999999999999999865422   2223456799999999999985


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.5e-63  Score=464.01  Aligned_cols=390  Identities=17%  Similarity=0.301  Sum_probs=300.4

Q ss_pred             CCCCCCCccccccccccc----cCCchHHHHHHHHHhCC-ceEeeecCccE-------EEEeChHHHHHHHhh----ccc
Q 046128            1 LPPGSMGWPFIGETLQIY----SQDPNVFFATKQKRYGE-IFKTHILGCPC-------VMLASPEAAKFVLAT----HAH   64 (435)
Q Consensus         1 lPPgp~~~p~lG~~~~~~----~~~~~~~~~~~~~~yG~-v~~~~~~~~~~-------vvi~~~~~v~~i~~~----~~~   64 (435)
                      +|||+.|+|++|++++++    ..+|..|+.+.++|||+ ||+++++|.++       |+++|++.++.+|.+    +..
T Consensus        18 ~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~~   97 (480)
T PLN02648         18 EIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKRD   97 (480)
T ss_pred             CCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccccc
Confidence            499999999999998643    34668999999999999 99999988655       999999999999975    554


Q ss_pred             cccccCcccccccccCC---ccccccchHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhh----cCCccchHHHH
Q 046128           65 FFKPTYPKSKEKIIGPS---ALFFHQADYHARLRKLVQSSLSPERIKKLIPDIEAIAISALESCA----VGQVINTFKEM  137 (435)
Q Consensus        65 ~~~~~~~~~~~~~~g~~---~~~~~~g~~~~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~d~~~~~  137 (435)
                      .+...++.... ++|..   +++..+|+.|+++|+++.+.|+ ..++.+.+.+.+.+.++++.|.    .++++|+.+.+
T Consensus        98 ~~~~~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vdv~~~~  175 (480)
T PLN02648         98 VFTGTYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKAEFNDPL  175 (480)
T ss_pred             cceeeeccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccccchH
Confidence            46666666665 88855   7778899999999999999999 4778899999999999999994    34579999999


Q ss_pred             HHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcccc---ccc---cCCcchHHH------------HHHHHHHHHHHHH
Q 046128          138 KKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNS---FPS---NIPGTAYHK------------ALLARKRLSQIVS  199 (435)
Q Consensus       138 ~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~p~~~~~~------------~~~~~~~~~~~~~  199 (435)
                      ..++++++++++||.+.+.  ..+...+..+...+..   ++.   .++.. ..+            ..+..+.+.+.++
T Consensus       176 ~~lt~~vi~~~lfG~~~~~--~~l~~~~~~~~~~~~~~~~~p~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~  252 (480)
T PLN02648        176 DQMAFNFLCKALTGKDPSE--TALGSDGPALIQKWLALQLAPLASTGLPHV-LEELLLHTFPLPFFLVKSDYDKLYDFFR  252 (480)
T ss_pred             HHHHHHHHHHHHcCCCcch--hhhccchhHHHHHHHHHHhhHHHHcCchHH-HHHHhhcccCCchhhhhccHHHHHHHHH
Confidence            9999999999999986544  1122222111111100   000   00100 000            0001111111111


Q ss_pred             HHHHHHHhhcccccchHHHhhcccccCCCCCCHHHHHHHHHH-HHHhhhhccHHHHHHHHHHHhhChH-HHHHHHHHHHH
Q 046128          200 EIICERKEKRLLEKDLLGCLLNSRDEKGRTLTEDQIADNIIG-VLFAAQDTTASVLTWILKYLHDNPK-LLEAVKAEQKV  277 (435)
Q Consensus       200 ~~i~~~~~~~~~~~~~l~~ll~~~~~~~~~l~~~~l~~~~~~-~~~ag~~tt~~~l~~~l~~l~~~p~-~~~~lr~E~~~  277 (435)
                      +              .+..+++..++  .+++++++.++++. +.+++++|++++++|++++|++||+ +++++++|++.
T Consensus       253 ~--------------~~~~ll~~~~~--~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~  316 (480)
T PLN02648        253 A--------------SATEALDLAEK--FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRS  316 (480)
T ss_pred             H--------------HHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            1              12233332222  23999999998875 4466777778899999999999995 99999999999


Q ss_pred             HHhhcCCCCCCCCHHhhhcCchhHHHHHHhhccccCcccceeeeecccccc----CEEecCCCEEeccccccccCCCCCC
Q 046128          278 VHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYK----GFLIPKGWKVMPLFRNIHHNSEFFS  353 (435)
Q Consensus       278 ~~~~~~~~~~~~~~~~l~~~p~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~----g~~ip~g~~v~~~~~~~~~d~~~~~  353 (435)
                      +.+.   .+..++++++++||||+++|+|+||++|++++..|.+.+|++++    ||.||||+.|+++.+.+||||++|+
T Consensus       317 ~~~~---~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~  393 (480)
T PLN02648        317 AVKA---GGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFD  393 (480)
T ss_pred             Hhcc---CCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCC
Confidence            8742   23468999999999999999999999999998889999999996    7999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCC--CCCCcccc---------CCCccCCCChHHHHHHHHHHHHHHHhcCe-eEEcCccCCc
Q 046128          354 EPQKVDPSRFKVAP--RPNTFVPF---------GLGVHACPGNELAKLEMLILIHHLVTEFR-WEVVGSQNGI  414 (435)
Q Consensus       354 ~p~~F~P~R~l~~~--~~~~~~~F---------g~G~r~C~G~~la~~~~~~~l~~ll~~~~-~~~~~~~~~~  414 (435)
                      ||++|+|+||+++.  ....+++|         |+|+|.|+|++||++|++++++.|+++|+ |++.++....
T Consensus       394 dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~~~~  466 (480)
T PLN02648        394 RPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDTSGL  466 (480)
T ss_pred             CcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCcccc
Confidence            99999999998642  22355555         56679999999999999999999999998 9987665433


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=5.7e-60  Score=435.20  Aligned_cols=380  Identities=26%  Similarity=0.438  Sum_probs=316.3

Q ss_pred             chHHHHHHHHHhCCceEeeecCcc--EEEEeChHHHHHHHhhccccccccCc-----ccccccccCCccccccchHHHHH
Q 046128           22 PNVFFATKQKRYGEIFKTHILGCP--CVMLASPEAAKFVLATHAHFFKPTYP-----KSKEKIIGPSALFFHQADYHARL   94 (435)
Q Consensus        22 ~~~~~~~~~~~yG~v~~~~~~~~~--~vvi~~~~~v~~i~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~g~~~~~~   94 (435)
                      +..+...+.+.||.+++++..++.  .+++++++++++++.++.. +++...     ......+|..+++..||+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPRF-FSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCccc-ccccccccccccchhhhccccceeecCCHHHHHH
Confidence            455667788899999999887665  7999999999999988752 222221     11346666555888999999999


Q ss_pred             HHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcccc
Q 046128           95 RKLVQSSLSPERIKKLIPDIEAIAISALESCAVGQVINTFKEMKKFSFDVGILSIFGNLDDSYREKLKQNYLIVDKGYNS  174 (435)
Q Consensus        95 R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  174 (435)
                      ||+++++|+++.++++.+.+.+.+.++++.+..++.+++.+....+++++++ .+||....+...........+.. .. 
T Consensus       103 Rkl~~~~F~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~~~~~~~~~~~-~~-  179 (411)
T COG2124         103 RKLLAPAFTPRALRGYRPLIREIADRLLDDLWQGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQLLRWSDALLLR-LD-  179 (411)
T ss_pred             HHHhccccCHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHhc-cC-
Confidence            9999999999999999999999999999998323477788999999999999 99998655544433332222222 11 


Q ss_pred             ccccCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHhhcccccCCCCCCHHHHHHHHHHHHHhhhhccHHHH
Q 046128          175 FPSNIPGTAYHKALLARKRLSQIVSEIICERKEKRLLEKDLLGCLLNSRDEKGRTLTEDQIADNIIGVLFAAQDTTASVL  254 (435)
Q Consensus       175 ~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ll~~~~~~~~~l~~~~l~~~~~~~~~ag~~tt~~~l  254 (435)
                       +...+...+.+..++..++.+++.++|++++.++  .+|+++.|+...++++..+|++|+.++++++++||+|||++++
T Consensus       180 -~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~~~--~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l  256 (411)
T COG2124         180 -PDLGPEEPWRRARAARRELDAYLRALIAERRAAP--RDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANAL  256 (411)
T ss_pred             -cccCCcccHHHHHHHHHHHHHHHHHHHHHhccCC--cccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHHH
Confidence             3333444578888999999999999999998444  4899999998876655579999999999999999999999999


Q ss_pred             HHHHHHHhhChHHHHHHHHHHHHHHhhcCCCCCCCCHHhhhcCchhHHHHHHhhccccCcccceeeeeccccccCEEecC
Q 046128          255 TWILKYLHDNPKLLEAVKAEQKVVHESNNGGQRALTWAQTKNMRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPK  334 (435)
Q Consensus       255 ~~~l~~l~~~p~~~~~lr~E~~~~~~~~~~~~~~~~~~~l~~~p~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~  334 (435)
                      +|+++.|++||++++++++|.+.                    ||++++|+|+||++||++...|++.+|++++|+.|||
T Consensus       257 ~~a~~~L~~~P~~~~~l~~e~~~--------------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~  316 (411)
T COG2124         257 AWALYALLRHPDQLAKLRAEPDR--------------------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPA  316 (411)
T ss_pred             HHHHHHHHHCchHHHHHHhCcch--------------------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCC
Confidence            99999999999999999988643                    6789999999999999999779999999999999999


Q ss_pred             CCEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCccccCCCccCCCChHHHHHHHHHHHHHHHhcCeeEEcCccCCc
Q 046128          335 GWKVMPLFRNIHHNSEFFSEPQKVDPSRFKVAPRPNTFVPFGLGVHACPGNELAKLEMLILIHHLVTEFRWEVVGSQNGI  414 (435)
Q Consensus       335 g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~  414 (435)
                      |+.|+++++++||||++|++|++|+|+||.     ..|+|||+|+|.|+|++||++|++++++.++++|++....+....
T Consensus       317 G~~V~~~~~~anrDp~~f~~P~~F~p~R~~-----~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~~~~~  391 (411)
T COG2124         317 GTVVLLSIGAANRDPEVFPDPDEFDPERFN-----NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAEPPPL  391 (411)
T ss_pred             CCEEEecHhhhcCChhhCCChhhcCCCCCC-----CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCCCCCc
Confidence            999999999999999999999999999986     889999999999999999999999999999999997766553223


Q ss_pred             ccCCccCCCCCCceEEEec
Q 046128          415 QYGPFPVPEKGLPARFWRV  433 (435)
Q Consensus       415 ~~~~~~~~~~~~~v~~~~r  433 (435)
                      .......+..+..+.++.|
T Consensus       392 ~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         392 VRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             cccccccCCCcceeeeecC
Confidence            3456677777777777665


No 33 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=67.23  E-value=2.5  Score=34.65  Aligned_cols=43  Identities=16%  Similarity=0.138  Sum_probs=31.6

Q ss_pred             CchhHHHHHHhhccccCcccceeeeeccccccCEEecCCCEEec
Q 046128          297 MRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMP  340 (435)
Q Consensus       297 ~p~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~g~~v~~  340 (435)
                      -....|||.|+.-...... +-=+..+|+.++|..|||||.+..
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~-vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSR-VRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCE-EEEEEcCceEECCEEeCCCCEEEE
Confidence            4456799999987654432 233445899999999999998875


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=64.88  E-value=5.8  Score=25.12  Aligned_cols=14  Identities=21%  Similarity=0.442  Sum_probs=7.9

Q ss_pred             CCCCCCCCCCCCCc
Q 046128          359 DPSRFKVAPRPNTF  372 (435)
Q Consensus       359 ~P~R~l~~~~~~~~  372 (435)
                      ||||||.-.....|
T Consensus        44 DPERWLP~~dRS~y   57 (59)
T PF08492_consen   44 DPERWLPKRDRSYY   57 (59)
T ss_pred             CccccCchhhhccc
Confidence            67788764333333


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=51.16  E-value=15  Score=22.99  Aligned_cols=19  Identities=42%  Similarity=0.681  Sum_probs=15.9

Q ss_pred             HHHHHHhhChHHHHHHHHH
Q 046128          256 WILKYLHDNPKLLEAVKAE  274 (435)
Q Consensus       256 ~~l~~l~~~p~~~~~lr~E  274 (435)
                      -++.+|.+||++.+++.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHHChHHHHHHHcC
Confidence            3577899999999999764


No 36 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=47.47  E-value=17  Score=27.40  Aligned_cols=24  Identities=25%  Similarity=0.508  Sum_probs=17.4

Q ss_pred             cCCCChHHHHHHHHHHHHHHHhcC
Q 046128          380 HACPGNELAKLEMLILIHHLVTEF  403 (435)
Q Consensus       380 r~C~G~~la~~~~~~~l~~ll~~~  403 (435)
                      .+|.|++||+.++-.++.+|+..-
T Consensus        18 yN~~gKKFsE~QiN~FIs~lItsP   41 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITSP   41 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS-
T ss_pred             ecccchHHHHHHHHHHHHHHhcCC
Confidence            589999999999999999998754


No 37 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=46.54  E-value=65  Score=19.47  Aligned_cols=42  Identities=24%  Similarity=0.162  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHH
Q 046128          234 QIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQ  275 (435)
Q Consensus       234 ~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~  275 (435)
                      +++..+..++-.|.|..+-.++-.+.+..-||+...++-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455566666666777777777777777777888887776664


No 38 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=43.82  E-value=9.1  Score=35.28  Aligned_cols=44  Identities=11%  Similarity=0.067  Sum_probs=31.6

Q ss_pred             CchhHHHHHHhhccccCcccceeeeeccccccCEEecCCCEEecc
Q 046128          297 MRCTYRFILESMRMASIISFTFREAVCDVEYKGFLIPKGWKVMPL  341 (435)
Q Consensus       297 ~p~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~g~~v~~~  341 (435)
                      -..+.|||.|+.-+.-... +-=+..+|+.++|..|||||.|+..
T Consensus       255 ~n~I~A~V~~~qtv~~G~~-vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSA-VKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecCCE-EEEEEcCceeeCCEEecCCCEEEEE
Confidence            4556788888887654332 2234458999999999999988654


No 39 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=40.91  E-value=12  Score=22.89  Aligned_cols=10  Identities=40%  Similarity=0.976  Sum_probs=8.6

Q ss_pred             ccCCCccCCC
Q 046128          374 PFGLGVHACP  383 (435)
Q Consensus       374 ~Fg~G~r~C~  383 (435)
                      +||-|.|.|-
T Consensus        13 kfg~GsrsC~   22 (56)
T KOG3506|consen   13 KFGQGSRSCR   22 (56)
T ss_pred             ccCCCCccee
Confidence            6999999983


No 40 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=34.20  E-value=27  Score=28.89  Aligned_cols=22  Identities=14%  Similarity=0.368  Sum_probs=18.9

Q ss_pred             cccccccCCCCCCCCCCCCCCC
Q 046128          341 LFRNIHHNSEFFSEPQKVDPSR  362 (435)
Q Consensus       341 ~~~~~~~d~~~~~~p~~F~P~R  362 (435)
                      ..+..|-|+.+|.|.+.|+|-|
T Consensus       190 GW~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  190 GWWPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCCCcccccCccccCCCC
Confidence            3455699999999999999988


No 41 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=31.83  E-value=37  Score=23.37  Aligned_cols=22  Identities=9%  Similarity=0.335  Sum_probs=18.5

Q ss_pred             HHHHHHHHHHHhcCeeEEcCcc
Q 046128          390 LEMLILIHHLVTEFRWEVVGSQ  411 (435)
Q Consensus       390 ~~~~~~l~~ll~~~~~~~~~~~  411 (435)
                      .-|+-++..+|+-|||.|++-+
T Consensus        60 ~~IrdAVsqVLkGYDWtLVPmP   81 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVPMP   81 (84)
T ss_pred             HHHHHHHHHHhccCCceeeecc
Confidence            4578899999999999998643


No 42 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=31.71  E-value=75  Score=18.07  Aligned_cols=12  Identities=8%  Similarity=0.553  Sum_probs=9.4

Q ss_pred             hhChHHHHHHHH
Q 046128          262 HDNPKLLEAVKA  273 (435)
Q Consensus       262 ~~~p~~~~~lr~  273 (435)
                      .+||++++.++.
T Consensus        24 ~~HPei~~~i~~   35 (38)
T PF14483_consen   24 ERHPEIQQEIRS   35 (38)
T ss_dssp             HHSTHHHHHHHT
T ss_pred             HhChhHHHHHHh
Confidence            379999988764


No 43 
>PF13993 YccJ:  YccJ-like protein
Probab=31.01  E-value=85  Score=19.87  Aligned_cols=31  Identities=23%  Similarity=0.225  Sum_probs=23.4

Q ss_pred             HhhhhccHHHHHHHHHHHhhChHHH-HHHHHH
Q 046128          244 FAAQDTTASVLTWILKYLHDNPKLL-EAVKAE  274 (435)
Q Consensus       244 ~ag~~tt~~~l~~~l~~l~~~p~~~-~~lr~E  274 (435)
                      +|..-.|+.-++-++++|+.+.+.. +++.+|
T Consensus         8 WA~~ReTS~EIAeAIFElA~~dE~lAekIWee   39 (69)
T PF13993_consen    8 WANVRETSIEIAEAIFELANNDEVLAEKIWEE   39 (69)
T ss_pred             HHHHhcCCHHHHHHHHHHhcccHHHHHHHHHc
Confidence            5667788888999999999987654 455544


No 44 
>KOG3262 consensus H/ACA small nucleolar RNP component GAR1 [Translation, ribosomal structure and biogenesis]
Probab=30.90  E-value=28  Score=27.73  Aligned_cols=35  Identities=26%  Similarity=0.319  Sum_probs=26.5

Q ss_pred             EEecCCCEEeccccccccCCCCCCCCCCCCC-CCCCCC
Q 046128          330 FLIPKGWKVMPLFRNIHHNSEFFSEPQKVDP-SRFKVA  366 (435)
Q Consensus       330 ~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P-~R~l~~  366 (435)
                      +.|+..+-|.++++.  -..++|-||+++.| +|||.+
T Consensus       106 fsIK~~dgv~assfk--~g~k~fi~p~KllPl~RFLP~  141 (215)
T KOG3262|consen  106 FSIKPSDGVQASSFK--PGDKLFIDPDKLLPLDRFLPQ  141 (215)
T ss_pred             EEEecCCCceeeccc--CCCeEEecccccCcHhhcCCC
Confidence            567777767766653  34677889999999 999985


No 45 
>PHA03162 hypothetical protein; Provisional
Probab=30.23  E-value=33  Score=25.63  Aligned_cols=24  Identities=21%  Similarity=0.333  Sum_probs=20.7

Q ss_pred             CCCccCCCChHHHHHHHHHHHHHH
Q 046128          376 GLGVHACPGNELAKLEMLILIHHL  399 (435)
Q Consensus       376 g~G~r~C~G~~la~~~~~~~l~~l  399 (435)
                      +.|.+.|||+...+-+|..=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999999999988877766


No 46 
>PRK06789 flagellar motor switch protein; Validated
Probab=28.61  E-value=52  Score=22.07  Aligned_cols=40  Identities=8%  Similarity=-0.056  Sum_probs=29.8

Q ss_pred             HHHHhhccccCcccce-eeeecc--ccccCEEecCCCEEeccc
Q 046128          303 FILESMRMASIISFTF-REAVCD--VEYKGFLIPKGWKVMPLF  342 (435)
Q Consensus       303 ~i~E~lRl~p~~~~~~-r~~~~d--~~~~g~~ip~g~~v~~~~  342 (435)
                      -++|.+.+.+....-. |.+.++  +.++|..|.+|..|.++-
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            4788888888766433 666654  566899999999998753


No 47 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=27.31  E-value=57  Score=17.57  Aligned_cols=16  Identities=31%  Similarity=0.576  Sum_probs=13.3

Q ss_pred             CCCCccccCCCccCCC
Q 046128          368 RPNTFVPFGLGVHACP  383 (435)
Q Consensus       368 ~~~~~~~Fg~G~r~C~  383 (435)
                      ....|+++.+..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            3578999998899994


No 48 
>PF02663 FmdE:  FmdE, Molybdenum formylmethanofuran dehydrogenase operon ;  InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase [].  This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=26.98  E-value=47  Score=25.23  Aligned_cols=23  Identities=26%  Similarity=0.312  Sum_probs=18.3

Q ss_pred             ccCCCChHHHHHHHHHHHHHHHh
Q 046128          379 VHACPGNELAKLEMLILIHHLVT  401 (435)
Q Consensus       379 ~r~C~G~~la~~~~~~~l~~ll~  401 (435)
                      -|.|||..++..+...++..|-.
T Consensus         4 GH~Cpgl~~G~r~~~~a~~~l~~   26 (131)
T PF02663_consen    4 GHLCPGLALGYRMAKYALEELGI   26 (131)
T ss_dssp             SS--HHHHHHHHHHHHHHHHHTS
T ss_pred             CCcCccHHHHHHHHHHHHHHcCC
Confidence            38999999999999999988844


No 49 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=25.86  E-value=2.3e+02  Score=19.60  Aligned_cols=50  Identities=12%  Similarity=0.072  Sum_probs=42.3

Q ss_pred             CCHHHHHHHHHHHHHhhhhccHHHHHHHHHHHhhChHHHHHHHHHHHHHH
Q 046128          230 LTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNPKLLEAVKAEQKVVH  279 (435)
Q Consensus       230 l~~~~l~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~E~~~~~  279 (435)
                      .+.+.........++.=++.++..+...+.+-++||+..+++.+.+..-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            45556666777888899999999999999999999999999999887654


No 50 
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.27  E-value=2e+02  Score=20.03  Aligned_cols=36  Identities=8%  Similarity=0.213  Sum_probs=27.4

Q ss_pred             HHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhc
Q 046128           27 ATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATH   62 (435)
Q Consensus        27 ~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~   62 (435)
                      .+..++||+|.-..--.+-.+.-++-+++.++..+=
T Consensus        19 aRqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~kl   54 (90)
T COG4471          19 ARQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEKL   54 (90)
T ss_pred             hHHHHhcCCEEEEecceeEEEEEECHHHHHHHHHHH
Confidence            456688999988865556667778999999998653


No 51 
>PRK10174 hypothetical protein; Provisional
Probab=25.26  E-value=1.3e+02  Score=19.43  Aligned_cols=31  Identities=16%  Similarity=0.125  Sum_probs=23.4

Q ss_pred             HhhhhccHHHHHHHHHHHhhChHHH-HHHHHH
Q 046128          244 FAAQDTTASVLTWILKYLHDNPKLL-EAVKAE  274 (435)
Q Consensus       244 ~ag~~tt~~~l~~~l~~l~~~p~~~-~~lr~E  274 (435)
                      +|..-.|+.-++-++++++.+.++. +++.+|
T Consensus        14 WA~vR~TS~EIAeAIFE~A~~dE~lAe~IWee   45 (75)
T PRK10174         14 WASLRNTSPEIAEAIFEVAGYDEKLAEKIWEE   45 (75)
T ss_pred             HHHHhhCCHHHHHHHHHHhcccHHHHHHHHHh
Confidence            5677788899999999999986654 444443


No 52 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=24.90  E-value=73  Score=19.74  Aligned_cols=18  Identities=11%  Similarity=0.157  Sum_probs=15.6

Q ss_pred             hCCceEeeecCccEEEEe
Q 046128           33 YGEIFKTHILGCPCVMLA   50 (435)
Q Consensus        33 yG~v~~~~~~~~~~vvi~   50 (435)
                      -|+++++.-||+.++|..
T Consensus         3 ~GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCCEEEEccCCCCeEEEE
Confidence            389999999999998874


No 53 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=23.95  E-value=1.6e+02  Score=22.15  Aligned_cols=39  Identities=21%  Similarity=0.225  Sum_probs=29.0

Q ss_pred             hHHHHHHHHHhCCceEeeecCccEEEEeChHHHHHHHhhcc
Q 046128           23 NVFFATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLATHA   63 (435)
Q Consensus        23 ~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~~~   63 (435)
                      ...+.+|.++||.+--..  +...+...|++.++++.+++.
T Consensus        77 ~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~~  115 (129)
T PF13625_consen   77 EQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADPE  115 (129)
T ss_pred             HHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhChh
Confidence            467889999999754421  455667889999999987654


No 54 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=23.36  E-value=23  Score=28.03  Aligned_cols=31  Identities=19%  Similarity=0.373  Sum_probs=24.7

Q ss_pred             CCCCCCCCC-----CCCCCCccccCCCccCCCChHH
Q 046128          357 KVDPSRFKV-----APRPNTFVPFGLGVHACPGNEL  387 (435)
Q Consensus       357 ~F~P~R~l~-----~~~~~~~~~Fg~G~r~C~G~~l  387 (435)
                      +++|++|=.     +.+..+.+-|..|+-.|-|.+=
T Consensus        36 eYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaKs   71 (185)
T COG2101          36 EYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAKS   71 (185)
T ss_pred             ccCHhHCCeeEEEecCCcceEEEEecCcEEEeccCc
Confidence            688888844     2556788999999999999763


No 55 
>PRK02302 hypothetical protein; Provisional
Probab=22.64  E-value=2.4e+02  Score=19.79  Aligned_cols=35  Identities=23%  Similarity=0.243  Sum_probs=26.0

Q ss_pred             HHHHHHhCCceEeeecCccEEEEeChHHHHHHHhh
Q 046128           27 ATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLAT   61 (435)
Q Consensus        27 ~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~   61 (435)
                      .+-.++||+|.-+.--.+-+++-.|-+.+.++..+
T Consensus        20 ~r~LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         20 ARKLSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             HHHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            34567899998886555666777799999888755


No 56 
>COG1965 CyaY Protein implicated in iron transport, frataxin homolog [Inorganic ion transport and metabolism]
Probab=21.72  E-value=1.3e+02  Score=21.86  Aligned_cols=29  Identities=7%  Similarity=0.163  Sum_probs=26.3

Q ss_pred             CCceEeeecCccEEEEeChHHHHHHHhhc
Q 046128           34 GEIFKTHILGCPCVMLASPEAAKFVLATH   62 (435)
Q Consensus        34 G~v~~~~~~~~~~vvi~~~~~v~~i~~~~   62 (435)
                      |.|+.+.+.+...+||+..+-.++|+...
T Consensus        36 g~VlTl~f~ngs~iiINkQ~P~~qiWlAs   64 (106)
T COG1965          36 GGVLTLTFDNGSQIIINKQEPLQQIWLAS   64 (106)
T ss_pred             CCEEEEEECCCcEEEEeCCChHHHHHhhc
Confidence            78999999999999999999999998654


No 57 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=20.76  E-value=1.2e+02  Score=17.64  Aligned_cols=19  Identities=11%  Similarity=0.078  Sum_probs=14.5

Q ss_pred             HHHHHHHhhChHHHHHHHH
Q 046128          255 TWILKYLHDNPKLLEAVKA  273 (435)
Q Consensus       255 ~~~l~~l~~~p~~~~~lr~  273 (435)
                      .|-+..++++||+|.-+.-
T Consensus        13 l~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             HHHHHHHHcCHHHHHHHHH
Confidence            4567778899999987753


No 58 
>PRK02886 hypothetical protein; Provisional
Probab=20.53  E-value=2.8e+02  Score=19.33  Aligned_cols=35  Identities=11%  Similarity=0.170  Sum_probs=25.9

Q ss_pred             HHHHHHhCCceEeeecCccEEEEeChHHHHHHHhh
Q 046128           27 ATKQKRYGEIFKTHILGCPCVMLASPEAAKFVLAT   61 (435)
Q Consensus        27 ~~~~~~yG~v~~~~~~~~~~vvi~~~~~v~~i~~~   61 (435)
                      .+-.++||+|.-+.--.+-+++-.|-+.+.++..+
T Consensus        18 ~r~LrkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k   52 (87)
T PRK02886         18 AKQLRKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK   52 (87)
T ss_pred             HHHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            34557899998886555566777799998888754


No 59 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=20.22  E-value=2.2e+02  Score=17.26  Aligned_cols=34  Identities=26%  Similarity=0.285  Sum_probs=22.9

Q ss_pred             HHHHHHhCCceEeeecCc----cEEEEeChHHHHHHHh
Q 046128           27 ATKQKRYGEIFKTHILGC----PCVMLASPEAAKFVLA   60 (435)
Q Consensus        27 ~~~~~~yG~v~~~~~~~~----~~vvi~~~~~v~~i~~   60 (435)
                      .++..+||+|-++.+...    -+|-..+.++++....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            456788999988877432    3444558888877764


Done!