BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046132
(361 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9S752|LOFG2_ARATH Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana
GN=LOG2 PE=1 SV=1
Length = 388
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 179/264 (67%), Positives = 211/264 (79%), Gaps = 18/264 (6%)
Query: 110 RYP-CGPMMAPPPPYVEHQKAVTIRNDVNLKKESLKLEADEENPGKLLVSFTFDATVAGR 168
RYP G MMA P PYVEHQKAVTIRNDVNLKKESL+LE D +NPG+ LVSFTFDATV+GR
Sbjct: 109 RYPYAGHMMAQPTPYVEHQKAVTIRNDVNLKKESLRLEPDPDNPGRFLVSFTFDATVSGR 168
Query: 169 RRRL---------QPGTNKENLFAPVTVQFQRGLGQKFRQPSGTGIDFSMFEETELLKEG 219
+ + KE++ P+T+ F++GLGQKF+Q SG+GIDFS+FE+ EL K
Sbjct: 169 ISVIFFAKESEDCKLTATKEDILPPITLDFEKGLGQKFKQSSGSGIDFSVFEDVELFKAA 228
Query: 220 -NMDVYPLAVKADASPVN-QNGSDGNSIPGPANSQITQAVFEKEKGEYQVRVVKQILWVN 277
+ ++YPLAVKA+A+P +N + S G N+QITQAV+EK+KGE ++RVVKQILWVN
Sbjct: 229 ADTEIYPLAVKAEAAPSGGENEEEERS--GSKNAQITQAVYEKDKGEIKIRVVKQILWVN 286
Query: 278 GMRYELQEIYGIGNSVDGDVDAND----PGKECVICLSEPRDTTVLPCRHMCMCSGCAKV 333
G RYELQEIYGIGN+V+GD D+ D PGKECVICLSEPRDTTVLPCRHMCMCSGCAKV
Sbjct: 287 GTRYELQEIYGIGNTVEGDDDSADDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKV 346
Query: 334 LRFQTNRCPICRQPVERLLEIKVN 357
LRFQTNRCPICRQPVERLLEIKV+
Sbjct: 347 LRFQTNRCPICRQPVERLLEIKVH 370
>sp|Q9LYW5|LUL1_ARATH Probable E3 ubiquitin-protein ligase LUL1 OS=Arabidopsis thaliana
GN=LUL1 PE=1 SV=1
Length = 337
Score = 325 bits (832), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 196/374 (52%), Positives = 231/374 (61%), Gaps = 53/374 (14%)
Query: 1 MGNISSSSGNGRRRHGSRRSHPPPPPPTPPQQEITANRYVFAAVTPYPTQYPNSNNPNNN 60
MGN+ S RR +RS+ PP T P E+ NR+VFAAV PY
Sbjct: 1 MGNLISLIFCCGRR---QRSNIPPAMETAPL-ELPPNRFVFAAVPPY------------- 43
Query: 61 NNNNNPPPQYYQYPPGGYYPPPPPAMPVPLPAPFDHHHRGGGGGEPGQWRYPCGPM---- 116
NP P Y PG PPP P+ LP F+H H P ++ P P+
Sbjct: 44 ---LNPNPNYVDQYPGNCLPPPVTEPPM-LPYNFNHLHHY----PPNSYQLP-HPLFHGG 94
Query: 117 ---MAPPPPYVEHQKAVTIRNDVNLKKESLKLEADEENPGKLLVSFTFDATVAGRRRRLQ 173
+ PPP YV HQKAVTIRNDVNLKK++L L D ENP +LLVSFTFDA++ GR +
Sbjct: 95 RYPILPPPTYV-HQKAVTIRNDVNLKKKTLTLIPDPENPNRLLVSFTFDASMPGRITVVF 153
Query: 174 PGT---------NKENLFAPVTVQFQRGLGQKFRQPSGTGIDFSMFEETELLKEGNMDVY 224
T KE+ P+T F GLGQKF Q SGTGID + F+++EL KE + DV+
Sbjct: 154 FATEDAECNLRATKEDTLPPITFDFGEGLGQKFIQSSGTGIDLTAFKDSELFKEVDTDVF 213
Query: 225 PLAVKADASPVNQNGSDGNSIPGPANSQITQAVFEKEKGEYQVRVVKQILWVNGMRYELQ 284
PLAVKA+A+P + S G N QITQ V+ KEKGE ++ VVKQILWVN RYEL
Sbjct: 214 PLAVKAEATPAEEGKS------GSTNVQITQVVYTKEKGEIKIEVVKQILWVNKRRYELL 267
Query: 285 EIYGIGNSVDGDVDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPIC 344
EIYGI N+VDG +D GKECV+CLSEPRDTTVLPCRHMCMCSGCAK LRFQTN CP+C
Sbjct: 268 EIYGIENTVDG----SDEGKECVVCLSEPRDTTVLPCRHMCMCSGCAKALRFQTNLCPVC 323
Query: 345 RQPVERLLEIKVNG 358
RQPVE LLEI NG
Sbjct: 324 RQPVEMLLEINKNG 337
>sp|Q9LFH6|LUL2_ARATH Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana
GN=LUL2 PE=2 SV=1
Length = 299
Score = 306 bits (783), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/259 (61%), Positives = 185/259 (71%), Gaps = 17/259 (6%)
Query: 110 RYPCGPMMAPPPPYVEHQKAVTIRNDVNLKKESLKLEADEENPGKLLVSFTFDATV---- 165
RYP G M A P YVEHQ+AVTIRND+NLKKE+L+LE DE+NPGK L+SFTFDA+V
Sbjct: 42 RYPYGEM-ASPVQYVEHQEAVTIRNDINLKKETLRLEPDEQNPGKFLLSFTFDASVPGSI 100
Query: 166 -----AGRRRRLQPGTNKENLFAPVTVQFQRGLGQKFRQPSGTGIDFSMFEETELLKEGN 220
A + KE+LF V F +GL Q+F+Q GTGIDFS E +L++
Sbjct: 101 TVMFFAKEGKDCNLIATKEDLFPSTQVSFAKGLEQRFKQACGTGIDFSDMSEADLVEANE 160
Query: 221 MDVYPLAVKADASPVNQNGSDGNSIPGPANSQITQAVFEKE-KGEYQVRVVKQILWVNGM 279
DVY +AVKA+ D + G N QIT V EK+ KGEY+ RVVKQILWVNG
Sbjct: 161 TDVYHVAVKAEVV-----SEDDHPESGTPNRQITHVVLEKDHKGEYKARVVKQILWVNGN 215
Query: 280 RYELQEIYGIGNSVDGD-VDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQT 338
RY LQEIYGIGN+VD + DAN+ GKECVICLSEPRDTTVLPCRHMCMCSGCAK+LRFQT
Sbjct: 216 RYVLQEIYGIGNTVDDNGEDANERGKECVICLSEPRDTTVLPCRHMCMCSGCAKLLRFQT 275
Query: 339 NRCPICRQPVERLLEIKVN 357
N CPICRQPV+RLLEI VN
Sbjct: 276 NLCPICRQPVDRLLEITVN 294
>sp|Q8LA32|LUL4_ARATH Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana
GN=LUL4 PE=2 SV=1
Length = 359
Score = 231 bits (589), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 167/281 (59%), Gaps = 31/281 (11%)
Query: 104 GEPGQWRYPCGPMMAPP------------PPYVEHQKAVTIRNDVNLKKESLKLEADEEN 151
+P W GPMM P PY+E Q A +RNDVN+ +++++LE D+
Sbjct: 85 AQPNWW----GPMMRPAYYCPPQPQTQPPKPYLEQQNAKKVRNDVNVHRDTVRLEVDDLV 140
Query: 152 PGKLLVSFTFDATVAGRRRRLQPGTNKEN---------LFAPVTVQFQRGLGQKFRQPSG 202
PG LVSF FDA G + N +++P FQ+G GQKF QPSG
Sbjct: 141 PGHHLVSFVFDALFDGSFTITFFAKEEPNCTIIPQFPEVYSPTRFHFQKGPGQKFLQPSG 200
Query: 203 TGIDFSMFEETELLKEGNMDVYPLAVKADASPVNQNGSDGNSIPGPANSQITQAVFEKE- 261
TG D S F +L K DVYPL + A+ + S+ +S+ + Q+TQAV EK+
Sbjct: 201 TGTDLSFFVLDDLSKPLEEDVYPLVISAETIISPNSISEQSSV----HKQVTQAVLEKDN 256
Query: 262 KGEYQVRVVKQILWVNGMRYELQEIYG-IGNSVDGDVDANDPGKECVICLSEPRDTTVLP 320
G ++V+VVKQILW+ G+RYEL+E+YG +D + G ECVIC++E +DT VLP
Sbjct: 257 DGSFKVKVVKQILWIEGVRYELRELYGSTTQGAASGLDESGSGTECVICMTEAKDTAVLP 316
Query: 321 CRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVNGPEE 361
CRH+CMCS CAK LR Q+N+CPICRQP+E LLEIK+N +E
Sbjct: 317 CRHLCMCSDCAKELRLQSNKCPICRQPIEELLEIKMNSSDE 357
>sp|Q84ME1|LUL3_ARATH Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana
GN=LUL3 PE=1 SV=1
Length = 378
Score = 231 bits (588), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 147/353 (41%), Positives = 192/353 (54%), Gaps = 39/353 (11%)
Query: 35 TANRYVFAAVTPYPT-QYPNSNNPNNNNNNNNPPPQYYQYPPGG-------YYPPPPPAM 86
N Y ++ P T Q P +++ PPP Y P G YYP P
Sbjct: 37 PQNGYSYSHNYPVSTPQLSLPPPPAQPPSSSQPPPSQISYRPYGQNYHQNQYYPQQAP-- 94
Query: 87 PVPLPAPFDHHHRGGGGGEPGQWRYPCGP----MMAPPPPYVEHQKAVTIRNDVNLKKES 142
P +HH G P GP +M PP PYVEHQ A ++NDVN+ K +
Sbjct: 95 ----PYFTGYHHNGFN---PMMRPVYFGPTPVAVMEPPAPYVEHQTAKKVKNDVNVNKAT 147
Query: 143 LKLEADEENPGKLLVSFTFDATVAGRRRRLQPGTNKENL---------FAPVTVQFQRGL 193
++L AD+ NPG LVSF FDA G + G + F P+ V FQ+G
Sbjct: 148 VRLVADDLNPGHYLVSFVFDALFDGSFTIIFFGEEESKCTIVPHLPEAFPPIKVPFQKGA 207
Query: 194 GQKFRQPSGTGIDFSMFEETELLKEGNMDVYPLAVKADASPVNQNGSDGNSIPGPANSQI 253
GQKF Q GTGID F +L K +VYPL + A+ + S+ + + QI
Sbjct: 208 GQKFLQAPGTGIDLGFFSLDDLSKPSPEEVYPLVISAETVISPSSVSEEPLV----HKQI 263
Query: 254 TQAVFEKE-KGEYQVRVVKQILWVNGMRYELQEIYGIGNSVDGDVDA----NDPGKECVI 308
TQAV EK G ++V+V+KQILW+ G RYELQE+YGI NS+ A + GKECVI
Sbjct: 264 TQAVLEKTNDGSFKVKVMKQILWIEGERYELQELYGIDNSITQGTAASGLEDTGGKECVI 323
Query: 309 CLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVNGPEE 361
CL+EP+DT V+PCRH+C+CS CA+ LRFQTN+CPICRQP+ L++IKV +E
Sbjct: 324 CLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQPIHELVKIKVESSDE 376
>sp|O60291|MGRN1_HUMAN E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1
SV=2
Length = 552
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 149/282 (52%), Gaps = 45/282 (15%)
Query: 103 GGEPGQWRYPCGPMMAPPPPYVEHQKAVTIRNDVNLKKESLKL---EADEENPG------ 153
G P Q+ P + P P H+ T+R+ VN++K+SL+L + D ++P
Sbjct: 64 GSRPVQF-----PYVTPAP----HEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKP 114
Query: 154 KLLVS--FTFDA----TVAGRRRRLQPGTNKENLFAPV-------TVQFQRGLGQKFRQP 200
++L S FTFDA + + + N +++P TV ++RG+ Q+F P
Sbjct: 115 RVLYSLEFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLP 174
Query: 201 SGTGIDFSMFEETELLKEGNMDVYPLAVKADASPVNQNGSDGNSIPGPANSQITQAVFEK 260
S IDFS +++ EL + + V+P+ ++A + G ++ + A FEK
Sbjct: 175 S-FKIDFSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTG-------HAHVLLAAFEK 226
Query: 261 E-KGEYQVRVVKQILWVNGMRYELQEIYGIGNSVD-----GDVDANDPGKECVICLSEPR 314
G + V+ +KQ V+ + Y LQEIYGI N + D + +D ECV+CLS+ R
Sbjct: 227 HMDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLR 286
Query: 315 DTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKV 356
DT +LPCRH+C+C+ CA LR+Q N CPICR P LL+I+
Sbjct: 287 DTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIRA 328
>sp|Q5XIQ4|MGRN1_RAT E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus GN=Mgrn1
PE=2 SV=1
Length = 533
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 145/281 (51%), Gaps = 45/281 (16%)
Query: 103 GGEPGQWRYPCGPMMAPPPPYVEHQKAVTIRNDVNLKKESLKL----------EADEENP 152
G P Q+ P + P P H+ T+R+ VN++K+SL+L D E P
Sbjct: 65 GSRPVQF-----PYVTPAP----HEPVKTLRSLVNIRKDSLRLVRYKDDTDSPTEDGEKP 115
Query: 153 GKLL-VSFTFDA----TVAGRRRRLQPGTNKENLFA-------PVTVQFQRGLGQKFRQP 200
L + FTFDA + + ++ N +++ TV ++RG+ Q+F P
Sbjct: 116 RVLYSLEFTFDADARVAITIYCQAVEEFVNGMTVYSCKNPSLQSETVHYKRGVSQQFSLP 175
Query: 201 SGTGIDFSMFEETELLKEGNMDVYPLAVKADASPVNQNGSDGNSIPGPANSQITQAVFEK 260
S IDFS +++ EL + + V+P+ ++A + G ++ + A FEK
Sbjct: 176 S-FKIDFSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTG-------HAHVLLAAFEK 227
Query: 261 E-KGEYQVRVVKQILWVNGMRYELQEIYGIGNSVD-----GDVDANDPGKECVICLSEPR 314
G + V+ +KQ V+ + Y LQEIYGI N + D + +D ECV+CLS+ R
Sbjct: 228 HVDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLR 287
Query: 315 DTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIK 355
DT +LPCRH+C+C+ CA LR+Q N CPICR P LL+I+
Sbjct: 288 DTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIR 328
>sp|Q3TEL6|RN157_MOUSE RING finger protein 157 OS=Mus musculus GN=Rnf157 PE=2 SV=2
Length = 685
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 141/271 (52%), Gaps = 43/271 (15%)
Query: 115 PMMAPPPPYVEHQKAVTIRNDVNLKKESLKL-------EADEENPGKLLV----SFTFD- 162
P APPP + T+R+ +N++K++L+L ++ E GK V FTFD
Sbjct: 71 PYAAPPP----QEPVKTLRSLINIRKDTLRLVKCAEEVKSHGEEAGKAKVHYNVEFTFDT 126
Query: 163 -ATVA-----GRRRRLQPGTN----KENLFAPVTVQFQRGLGQKFRQPSGTGIDFSMFEE 212
A VA Q G K+N TV ++RG+ Q+F PS T +D S + E
Sbjct: 127 DARVAITIYYQATEEFQNGIASYIPKDNSLQSETVHYKRGVFQQFCLPSHT-VDPSEWAE 185
Query: 213 TELLKEGNMDVYPLAVKADASPVNQNGSDGNSIPGPANSQITQAVFEKE-KGEYQVRVVK 271
EL + + +VYPL V A +G+ G + + FEK G + V+ +K
Sbjct: 186 EELGFDLDREVYPLVVHAVVD-------EGDEYFG--HCHVLLGTFEKHPDGTFCVKPLK 236
Query: 272 QILWVNGMRYELQEIYGIGNSVD------GDVDANDPGKECVICLSEPRDTTVLPCRHMC 325
Q V+G+ Y LQEIYGI N + + D +D ECV+CLS+ RDT +LPCRH+C
Sbjct: 237 QKQVVDGVSYLLQEIYGIENKYNTQDSKVAEDDVSDNSAECVVCLSDVRDTLILPCRHLC 296
Query: 326 MCSGCAKVLRFQTNRCPICRQPVERLLEIKV 356
+C+ CA LR+Q N CPICR P LL+I+
Sbjct: 297 LCNTCADTLRYQANNCPICRLPFRALLQIRA 327
>sp|Q96PX1|RN157_HUMAN RING finger protein 157 OS=Homo sapiens GN=RNF157 PE=1 SV=3
Length = 679
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 145/271 (53%), Gaps = 43/271 (15%)
Query: 115 PMMAPPPPYVEHQKAVTIRNDVNLKKESLKLE--ADE-ENPGKLL--------VSFTF-- 161
P APPP + T+R+ VN++K++L+L A+E ++PG+ V FTF
Sbjct: 71 PYAAPPP----QEPVKTLRSLVNIRKDTLRLVKCAEEVKSPGEEASKAKVHYNVEFTFDT 126
Query: 162 DATVA-----GRRRRLQPGTN----KENLFAPVTVQFQRGLGQKFRQPSGTGIDFSMFEE 212
DA VA Q G K+N TVQ++RG+ Q+F PS T +D S + E
Sbjct: 127 DARVAITIYYQATEEFQNGIASYIPKDNSLQSETVQYKRGVCQQFCLPSHT-VDPSEWAE 185
Query: 213 TELLKEGNMDVYPLAVKADASPVNQNGSDGNSIPGPANSQITQAVFEKE-KGEYQVRVVK 271
EL + + +VYPL V A +G+ G + + FEK G + V+ +K
Sbjct: 186 EELGFDLDREVYPLVVHAVV-------DEGDEYFG--HCHVLLGTFEKHTDGTFCVKPLK 236
Query: 272 QILWVNGMRYELQEIYGIGNSVD------GDVDANDPGKECVICLSEPRDTTVLPCRHMC 325
Q V+G+ Y LQEIYGI N + + + +D ECV+CLS+ RDT +LPCRH+C
Sbjct: 237 QKQVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRHLC 296
Query: 326 MCSGCAKVLRFQTNRCPICRQPVERLLEIKV 356
+C+ CA LR+Q N CPICR P LL+I+
Sbjct: 297 LCNTCADTLRYQANNCPICRLPFRALLQIRA 327
>sp|Q9D074|MGRN1_MOUSE E3 ubiquitin-protein ligase MGRN1 OS=Mus musculus GN=Mgrn1 PE=1
SV=2
Length = 532
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 145/281 (51%), Gaps = 45/281 (16%)
Query: 103 GGEPGQWRYPCGPMMAPPPPYVEHQKAVTIRNDVNLKKESLKL----------EADEENP 152
G P Q+ P + P P H+ T+R+ VN++K+SL+L D E P
Sbjct: 64 GSRPVQF-----PYVTPAP----HEPVKTLRSLVNIRKDSLRLVRYKEDADSPTEDGEKP 114
Query: 153 GKLL-VSFTFDA----TVAGRRRRLQPGTNKENLFA-------PVTVQFQRGLGQKFRQP 200
L + FTFDA + + ++ N +++ TV ++RG+ Q+F P
Sbjct: 115 RVLYSLEFTFDADARVAITIYCQAVEELVNGVAVYSCKNPSLQSETVHYKRGVSQQFSLP 174
Query: 201 SGTGIDFSMFEETELLKEGNMDVYPLAVKADASPVNQNGSDGNSIPGPANSQITQAVFEK 260
S IDFS +++ EL + + V+P+ ++A + G ++ + A FEK
Sbjct: 175 S-FKIDFSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTG-------HAHVLLAAFEK 226
Query: 261 E-KGEYQVRVVKQILWVNGMRYELQEIYGIGNSVD-----GDVDANDPGKECVICLSEPR 314
G + V+ +KQ V+ + Y LQEIYGI N + D + +D ECV+CLS+ R
Sbjct: 227 HVDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLR 286
Query: 315 DTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIK 355
DT +LPCRH+C+C+ CA LR+Q N CPICR P LL+I+
Sbjct: 287 DTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIR 327
>sp|Q7ZUL9|MGRN1_DANRE Probable E3 ubiquitin-protein ligase MGRN1 OS=Danio rerio GN=mgrn1
PE=2 SV=1
Length = 529
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 144/266 (54%), Gaps = 41/266 (15%)
Query: 122 PYV---EHQKAVTIRNDVNLKKESLKL-------EADEENPG--KLLVSFTF----DATV 165
PYV H+ T+R+ VN++K+SL+L ++ E+ G ++L S F DA V
Sbjct: 71 PYVTPAAHEPVKTLRSLVNIRKDSLRLVRYKDDSDSTPEDTGDPRVLYSVEFCFDTDARV 130
Query: 166 AGRR--RRLQPGTNKENLFAPV-------TVQFQRGLGQKFRQPSGTGIDFSMFEETELL 216
A + + N +++ TV ++RG+ Q+F PS IDF+ ++ EL
Sbjct: 131 AITLYCQAFEEFANGMAIYSAKSPSMVSETVHYKRGINQQFSLPS-FKIDFTKWKPEELN 189
Query: 217 KEGNMDVYPLAVKADASPVNQNGSDGNSIPGPANSQITQAVFEKE-KGEYQVRVVKQILW 275
+ + V+PL V+A DG+ + G A+ + A FE+ G + V+ +KQ
Sbjct: 190 FDLDKGVFPLVVQAIVD-------DGDDVTGHAH--VLLAAFERHVDGSFSVKPLKQKQI 240
Query: 276 VNGMRYELQEIYGIGNSVDGDVDA-----NDPGKECVICLSEPRDTTVLPCRHMCMCSGC 330
V+ + Y LQEIYGI N + + + +D ECV+CLS+ RDT +LPCRH+C+C+ C
Sbjct: 241 VDRVSYLLQEIYGIENRNNQETKSTEDENSDNSSECVVCLSDLRDTLILPCRHLCLCNAC 300
Query: 331 AKVLRFQTNRCPICRQPVERLLEIKV 356
A LR+Q N CPICR P LL+I+
Sbjct: 301 ADTLRYQANNCPICRLPFRALLQIRA 326
>sp|Q6INH1|RN157_XENLA RING finger protein 157 OS=Xenopus laevis GN=rnf157 PE=2 SV=1
Length = 674
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 140/271 (51%), Gaps = 43/271 (15%)
Query: 115 PMMAPPPPYVEHQKAVTIRNDVNLKKESLKL-EADEENPGKLL----------VSFTFD- 162
P AP P + T+R+ +N++K++L+L EE + V FTFD
Sbjct: 71 PYTAPSP----QEPVKTLRSLINIRKDTLRLVRCTEELKTTGVEGSRPKVHYNVEFTFDT 126
Query: 163 -ATVA-----GRRRRLQPGTN----KENLFAPVTVQFQRGLGQKFRQPSGTGIDFSMFEE 212
A VA Q G K + TV F+RG+ Q+F PS T +D S + E
Sbjct: 127 DARVAITMYYQATEEFQGGIPSYLPKSSNLQSDTVHFKRGVSQQFCFPSHT-VDPSEWRE 185
Query: 213 TELLKEGNMDVYPLAVKADASPVNQNGSDGNSIPGPANSQITQAVFEKE-KGEYQVRVVK 271
EL + + +VYP+ V A V + G + +S + A FEK G + V+ +K
Sbjct: 186 EELTFDLDREVYPMVVHA----VVEEGEEH-----LGHSHVLMATFEKHADGSFCVKPLK 236
Query: 272 QILWVNGMRYELQEIYGIGN---SVDGDV---DANDPGKECVICLSEPRDTTVLPCRHMC 325
Q V+G+ Y LQEIYGI N S D V + +D ECV+CLS+ RDT +LPCRH+C
Sbjct: 237 QKQVVDGVSYLLQEIYGIENKYNSQDSKVAEDELSDNSAECVVCLSDVRDTLILPCRHLC 296
Query: 326 MCSGCAKVLRFQTNRCPICRQPVERLLEIKV 356
+C+ CA LR+Q + CPICR P LL+I+
Sbjct: 297 LCNACADTLRYQASNCPICRLPFRALLQIRA 327
>sp|Q0MW30|NEU1B_MOUSE E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus GN=Neurl1b PE=1
SV=1
Length = 546
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 305 ECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNR-CPICRQPVERLLEI 354
EC +C DT + C HMC+C GC LR Q CPICR+P++ +++I
Sbjct: 493 ECTVCFDSEVDTVIYTCGHMCLCHGCGLRLRRQARACCPICRRPIKDVIKI 543
>sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2
Length = 943
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 270 VKQILWVNGMRYELQEIYGIGNSVDGDVDANDPGKECVICLSEPRDTTVLPCRHMCMCSG 329
+KQI + RY L + + D D N CVIC S P + +LPCRH +CS
Sbjct: 866 LKQIGSIKDQRY-LNRLVSLEKEKDQLKDQNS----CVICASNPPNIVLLPCRHSSLCSD 920
Query: 330 CAKVLRFQTNRCPICRQPVERLLEI 354
C L +CPICR +E + I
Sbjct: 921 CCSKL----TKCPICRSHIENKISI 941
>sp|O10296|IAP1_NPVOP Apoptosis inhibitor 1 OS=Orgyia pseudotsugata multicapsid
polyhedrosis virus GN=IAP1 PE=4 SV=1
Length = 275
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 299 ANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVN 357
A EC +CL RD +LPCRH C+C C L +CP CRQ V ++I V
Sbjct: 220 AGSEALECKVCLERQRDAVLLPCRHFCVCMQCYFAL---DGKCPTCRQDVADFIKIFVT 275
>sp|Q6R7I2|IAP1_OSHVF Putative apoptosis inhibitor ORF42 OS=Ostreid herpesvirus 1
(isolate France) GN=ORF42 PE=4 SV=1
Length = 364
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Query: 295 GDVDANDPG----KECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVER 350
DV +D G +ECVICL DT + PC H +C GC+ Q +CP+CR+ +E+
Sbjct: 300 ADVKWSDVGFSNDEECVICLGAKADTILKPCLHYSLCYGCST----QVQKCPLCRKKIEK 355
Query: 351 LLE 353
++
Sbjct: 356 RVQ 358
>sp|A8MQ27|NEU1B_HUMAN E3 ubiquitin-protein ligase NEURL1B OS=Homo sapiens GN=NEURL1B PE=1
SV=1
Length = 555
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 305 ECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNR-CPICRQPVERLLEI 354
EC +C DT + C HMC+C C L+ Q CPICR+P++ +++I
Sbjct: 502 ECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKI 552
>sp|Q8CJC5|NEUL3_MOUSE E3 ubiquitin-protein ligase NEURL3 OS=Mus musculus GN=Neurl3 PE=2
SV=1
Length = 254
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 303 GKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVNGPEE 361
G+ECVIC +T ++PC H C CA + T RCPICR +E + + EE
Sbjct: 194 GEECVICFHNTANTRLMPCGHSHFCGSCAWHIFKDTARCPICRWQIEEVAVVSSLKAEE 252
>sp|Q8BUH7|RNF26_MOUSE Ring finger protein 26 OS=Mus musculus GN=Rnf26 PE=2 SV=1
Length = 424
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 304 KECVICLSEPRDTTVLPCRHMCMCSGCAKVLR----FQTNRCPICRQPVERLLEI 354
K+CVIC + + +LPCRH+C+C C ++L + N CP+CR+ + + L +
Sbjct: 369 KKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRN-CPLCRRSILQTLNV 422
>sp|Q7XI08|XB34_ORYSJ Probable E3 ubiquitin-protein ligase XBOS34 OS=Oryza sativa subsp.
japonica GN=XBOS34 PE=2 SV=1
Length = 513
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 300 NDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEI 354
N P CVICL P + +PC HM C C K + + CPICR + +++ +
Sbjct: 456 NTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRL 510
>sp|Q6ZQM0|RFFL_MOUSE E3 ubiquitin-protein ligase rififylin OS=Mus musculus GN=Rffl PE=1
SV=1
Length = 377
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 62/137 (45%), Gaps = 27/137 (19%)
Query: 240 SDGNSIPGPANSQITQAVFEKEKGEYQVRVVKQILWVNGMRY-------ELQE----IY- 287
S+ + +PG S E +G VR +K+IL N + Y EL E +Y
Sbjct: 243 SEDSFVPGRRASLSDLTHLEDIEG-LTVRQLKEILARNFVNYKGCCEKWELMERVTRLYK 301
Query: 288 ---GIGNSVDGDVDAND----PGKE---CVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQ 337
G+ + V G+ D N G E C IC+ P D +L C HM C+ C K +
Sbjct: 302 DQKGLQHLVSGNEDQNGGAVPSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGK----R 357
Query: 338 TNRCPICRQPVERLLEI 354
N CPICRQ V R + +
Sbjct: 358 MNECPICRQYVIRAVHV 374
>sp|Q99675|CGRF1_HUMAN Cell growth regulator with RING finger domain protein 1 OS=Homo
sapiens GN=CGRRF1 PE=1 SV=1
Length = 332
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 304 KECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVE 349
K+CV+C + + +LPCRH C+C GC K + +CP+CRQ V+
Sbjct: 272 KDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQ----QCPMCRQFVQ 313
>sp|Q8CIN9|RFFL_RAT E3 ubiquitin-protein ligase rififylin OS=Rattus norvegicus GN=Rffl
PE=1 SV=1
Length = 362
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 62/137 (45%), Gaps = 27/137 (19%)
Query: 240 SDGNSIPGPANSQITQAVFEKEKGEYQVRVVKQILWVNGMRY-------ELQE----IY- 287
S+ + +PG S E +G VR +K+IL N + Y EL E +Y
Sbjct: 228 SEDSFVPGRRASLSDLTHLEDIEG-LTVRQLKEILARNFVNYKGCCEKWELMERVTRLYK 286
Query: 288 ---GIGNSVDGDVDAND----PGKE---CVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQ 337
G+ + V G+ D N G E C IC+ P D +L C HM C+ C K +
Sbjct: 287 DQKGLQHLVSGNEDQNGGAVPSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGK----R 342
Query: 338 TNRCPICRQPVERLLEI 354
N CPICRQ V R + +
Sbjct: 343 MNECPICRQYVIRAVHV 359
>sp|P41435|IAP1_NPVAC Apoptosis inhibitor 1 OS=Autographa californica nuclear
polyhedrosis virus GN=IAP1 PE=4 SV=1
Length = 286
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 291 NSVDGDVDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVER 350
++++ + D + EC +CL RD ++PCRH C+C C L +CP CRQ V
Sbjct: 223 DNLNENADDIEEKYECKVCLERQRDAVLMPCRHFCVCVQCYFGL---DQKCPTCRQDVTD 279
Query: 351 LLEIKV 356
++I V
Sbjct: 280 FIKIFV 285
>sp|Q9BY78|RNF26_HUMAN RING finger protein 26 OS=Homo sapiens GN=RNF26 PE=2 SV=1
Length = 433
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 304 KECVICLSEPRDTTVLPCRHMCMCSGCAKVLR----FQTNRCPICRQPVERLLEI 354
K+CVIC + + +LPCRH+C+C C ++L + N CP+CR+ + + L +
Sbjct: 378 KKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRN-CPLCRRGILQTLNV 431
>sp|Q8WZ73|RFFL_HUMAN E3 ubiquitin-protein ligase rififylin OS=Homo sapiens GN=RFFL PE=1
SV=1
Length = 363
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 61/137 (44%), Gaps = 27/137 (19%)
Query: 240 SDGNSIPGPANSQITQAVFEKEKGEYQVRVVKQILWVNGMRY-------ELQE----IY- 287
S+ + +PG S E +G VR +K+IL N + Y EL E +Y
Sbjct: 229 SEDSFVPGRRASLSDLTDLEDIEG-LTVRQLKEILARNFVNYKGCCEKWELMERVTRLYK 287
Query: 288 ---GIGNSVDGDVDAND----PGKE---CVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQ 337
G+ + V G D N G E C IC+ P D +L C HM C+ C K +
Sbjct: 288 DQKGLQHLVSGAEDQNGGAVPSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGK----R 343
Query: 338 TNRCPICRQPVERLLEI 354
N CPICRQ V R + +
Sbjct: 344 MNECPICRQYVIRAVHV 360
>sp|O76050|NEU1A_HUMAN Neuralized-like protein 1A OS=Homo sapiens GN=NEURL PE=2 SV=1
Length = 574
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 305 ECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNR-CPICRQPVERLLE 353
EC IC DT + C HMC+C C L+ + CPICR+P++ +++
Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHACCPICRRPIKDIIK 569
>sp|Q5M870|NEUL3_RAT E3 ubiquitin-protein ligase NEURL3 OS=Rattus norvegicus GN=Neurl3
PE=2 SV=1
Length = 254
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 303 GKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERL 351
G+ECVIC +T ++PC H C CA + T RCP+CR +E +
Sbjct: 194 GEECVICFHNTANTRLMPCGHSQFCGSCAWHIFKDTARCPMCRWQIEEV 242
>sp|Q923S6|NEU1A_MOUSE Neuralized-like protein 1A OS=Mus musculus GN=Neurl PE=1 SV=1
Length = 574
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 305 ECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNR-CPICRQPVERLLE 353
EC IC DT + C HMC+C C L+ + CPICR+P++ +++
Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYSCGLRLKKALHACCPICRRPIKDIIK 569
>sp|Q0WPJ7|RF298_ARATH Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana
GN=RF298 PE=2 SV=1
Length = 814
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 304 KECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQT-NRCPICRQPVERLLEIK 355
+ECV+CLSE LPC H +CS C ++ + CP CR ++R ++ +
Sbjct: 758 RECVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKIQRRIQAR 810
>sp|P29503|NEUR_DROME Protein neuralized OS=Drosophila melanogaster GN=neur PE=1 SV=2
Length = 754
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 296 DVDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCA--KVLRFQTNRCPICRQPVERLL 352
D + D EC IC P D+ + C HMCMC CA + +CP+CR + ++
Sbjct: 691 DQQSTDSSAECTICYENPIDSVLYMCGHMCMCYDCAIEQWRGVGGGQCPLCRAVIRDVI 749
>sp|Q4R7G8|MUL1_MACFA Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Macaca
fascicularis GN=MUL1 PE=2 SV=1
Length = 352
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 298 DANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL 352
D CV+CLS + L C H+C C+ C + L + +CPICRQ + R++
Sbjct: 294 DRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALP-EPKKCPICRQAITRVI 347
>sp|Q24746|NEUR_DROVI Protein neuralized OS=Drosophila virilis GN=neur PE=4 SV=1
Length = 747
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 296 DVDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCA--KVLRFQTNRCPICRQPVERLL 352
D + D EC IC P D+ + C HMCMC CA + +CP+CR + ++
Sbjct: 684 DQQSTDSSAECTICYENPIDSVLYMCGHMCMCYDCAIEQWRGVGGGQCPLCRAVIRDVI 742
>sp|Q969V5|MUL1_HUMAN Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Homo sapiens
GN=MUL1 PE=1 SV=1
Length = 352
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 298 DANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL 352
D CV+CLS + L C H+C C+ C + L + +CPICRQ + R++
Sbjct: 294 DRESLKSACVVCLSSFKSCVFLECGHVCSCTECYRALP-EPKKCPICRQAITRVI 347
>sp|Q8BMJ7|CGRF1_MOUSE Cell growth regulator with RING finger domain protein 1 OS=Mus
musculus GN=Cgrrf1 PE=2 SV=1
Length = 332
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 294 DGDVDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVE 349
DGD + ++CV+C + + +LPCRH C+C C + + +CP+CRQ V+
Sbjct: 263 DGD-PVEESSRDCVVCQNGGVNWVLLPCRHACLCDSCVRYFK----QCPMCRQFVQ 313
>sp|Q4FE47|XB35_ARATH Putative E3 ubiquitin-protein ligase XBAT35 OS=Arabidopsis thaliana
GN=XBAT35 PE=2 SV=1
Length = 462
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 292 SVDGDVDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERL 351
S +G+ + C ICL P + +PC H+ C C K ++ + CP+CR ++++
Sbjct: 397 STEGERKEDGNTGTCAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQV 456
Query: 352 LEI 354
+++
Sbjct: 457 IKL 459
>sp|Q5M7X9|MUL1A_DANRE Mitochondrial ubiquitin ligase activator of nfkb 1-A OS=Danio rerio
GN=mul1a PE=2 SV=1
Length = 341
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 300 NDPGKE--CVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL 352
D G E CVICLS PR +L C H+C C C + L CPICRQ ++R++
Sbjct: 284 EDNGVENACVICLSNPRGCVLLDCGHVCCCFRCYQAL--PQPFCPICRQHIKRVV 336
>sp|P97587|CGRF1_RAT Cell growth regulator with RING finger domain protein 1 OS=Rattus
norvegicus GN=Cgrrf1 PE=2 SV=1
Length = 332
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 295 GDVD-ANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVE 349
+VD + K+CV+C + + +LPCRH C+C C + +CP+CRQ V+
Sbjct: 262 AEVDPVEESSKDCVVCQNGGVNWVLLPCRHACLCDSCVCYFK----QCPMCRQFVQ 313
>sp|Q96EH8|NEUL3_HUMAN E3 ubiquitin-protein ligase NEURL3 OS=Homo sapiens GN=NEURL3 PE=2
SV=2
Length = 262
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 302 PGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVE 349
PG+EC IC +T ++PC H C CA + T +CP+CR +E
Sbjct: 198 PGEECAICFYHAANTRLVPCGHTYFCRYCAWRVFSDTAKCPVCRWQIE 245
>sp|C0HBT3|RN146_SALSA E3 ubiquitin-protein ligase rnf146 OS=Salmo salar GN=rnf146 PE=2
SV=1
Length = 349
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 305 ECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPV-ERLLE 353
EC ICL LPCRH+ C C K +Q+ RC +CRQ V E LE
Sbjct: 40 ECAICLQSCVHPVQLPCRHV-FCFLCVKGASWQSKRCALCRQEVPEDFLE 88
>sp|Q8VCM5|MUL1_MOUSE Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Mus musculus
GN=Mul1 PE=2 SV=2
Length = 352
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 298 DANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL 352
D CV+CLS + L C H+C C C L + RCPICR+ + R++
Sbjct: 294 DRESLKSACVVCLSNFKSCVFLECGHVCSCRQCYLALP-EPKRCPICRREITRVI 347
>sp|Q9FPH0|XB34_ARATH Putative E3 ubiquitin-protein ligase XBAT34 OS=Arabidopsis thaliana
GN=XBAT34 PE=2 SV=1
Length = 376
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 299 ANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEI 354
AN CVIC+ P + +PC H+ C C K + + CP+CR +++++++
Sbjct: 318 ANKEDGLCVICVDAPSEAVCVPCGHVAGCISCLKEIENKKMGCPVCRANIDQVIKL 373
>sp|O42354|MDM2_DANRE E3 ubiquitin-protein ligase Mdm2 OS=Danio rerio GN=mdm2 PE=2 SV=1
Length = 445
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 306 CVICLSEPRDTTVLPCR--HMCMCSGCAKVLRFQTNRCPICRQPVERLL 352
CVIC S P++ ++ R H+ C CAK L+ + CP+CR+P++ ++
Sbjct: 392 CVICQSRPKNGCIVHGRTGHLMACYTCAKKLKNRNKLCPVCREPIQSVV 440
>sp|Q6NTT6|MUL1_XENLA Mitochondrial ubiquitin ligase activator of nfkb 1 OS=Xenopus
laevis GN=mul1 PE=2 SV=1
Length = 353
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 306 CVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL 352
C ICLS + L C H+C C C + L +CPICR ++R++
Sbjct: 303 CSICLSTEKSCVFLECGHVCSCISCYQALP-SPKKCPICRNFIDRIV 348
>sp|P56951|MDM2_HORSE E3 ubiquitin-protein ligase Mdm2 OS=Equus caballus GN=MDM2 PE=2
SV=1
Length = 491
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 250 NSQITQAVFEKEKGEY-QVRVVKQILWV---NGMRYELQEIYGIGNSVDGD--VDANDPG 303
+ +ITQA +E +Y Q I++ + +E +E S++ ++A +P
Sbjct: 379 DDKITQASLSQESEDYSQPSTSNSIIYSSQEDVKEFEREETQDKEESMESSFPLNAIEP- 437
Query: 304 KECVICLSEPRDTTVLPCR--HMCMCSGCAKVLRFQTNRCPICRQPVERLL 352
CVIC P++ ++ + H+ C CAK L+ + CP+CRQP++ ++
Sbjct: 438 --CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 486
>sp|Q6TEM9|MYLIA_DANRE E3 ubiquitin-protein ligase MYLIP-A OS=Danio rerio GN=mylipa PE=1
SV=2
Length = 472
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 306 CVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERL 351
C++C E D PC HM C CA Q CP+CR VE +
Sbjct: 384 CMLCCEEEIDAAFCPCGHMVCCQNCAA----QLQSCPVCRSEVEHV 425
>sp|P56273|MDM2_XENLA E3 ubiquitin-protein ligase Mdm2 OS=Xenopus laevis GN=mdm2 PE=1
SV=2
Length = 473
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 306 CVICLSEPRDTTVLPCR--HMCMCSGCAKVLRFQTNRCPICRQPVERLL 352
CVIC + P++ ++ R H+ C CAK L+ + CP+CR+P++ ++
Sbjct: 420 CVICQTRPKNGCIVHGRTGHLMACYTCAKKLKKRNKPCPVCREPIQMIV 468
>sp|P56950|MDM2_CANFA E3 ubiquitin-protein ligase Mdm2 OS=Canis familiaris GN=MDM2 PE=2
SV=1
Length = 487
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 306 CVICLSEPRDTTVLPCR--HMCMCSGCAKVLRFQTNRCPICRQPVERLL 352
CVIC P++ ++ + H+ C CAK L+ + CP+CRQP++ ++
Sbjct: 434 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 482
>sp|P23804|MDM2_MOUSE E3 ubiquitin-protein ligase Mdm2 OS=Mus musculus GN=Mdm2 PE=1 SV=3
Length = 489
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 306 CVICLSEPRDTTVLPCR--HMCMCSGCAKVLRFQTNRCPICRQPVERLL 352
CVIC P++ ++ + H+ C CAK L+ + CP+CRQP++ ++
Sbjct: 436 CVICQGRPKNGCIVHGKTGHLMSCFTCAKKLKKRNKPCPVCRQPIQMIV 484
>sp|Q7YRZ8|MDM2_FELCA E3 ubiquitin-protein ligase Mdm2 OS=Felis catus GN=MDM2 PE=2 SV=1
Length = 491
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 306 CVICLSEPRDTTVLPCR--HMCMCSGCAKVLRFQTNRCPICRQPVERLL 352
CVIC P++ ++ + H+ C CAK L+ + CP+CRQP++ ++
Sbjct: 438 CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 486
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.136 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169,744,612
Number of Sequences: 539616
Number of extensions: 9034955
Number of successful extensions: 120300
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 1431
Number of HSP's that attempted gapping in prelim test: 66668
Number of HSP's gapped (non-prelim): 39799
length of query: 361
length of database: 191,569,459
effective HSP length: 119
effective length of query: 242
effective length of database: 127,355,155
effective search space: 30819947510
effective search space used: 30819947510
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)