BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046135
(315 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 102/188 (54%), Gaps = 4/188 (2%)
Query: 1 ILELQGKKLLGNIPLSIGNLKI-LIQLDLSDNFLEGNIQTSLGKCER--FVQIELSNNHL 57
+L+L + G +P S+ NL L+ LDLS N G I +L + + ++ L NN
Sbjct: 347 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGF 406
Query: 58 SGTIPPELIGLSSLLIALDLSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSC 117
+G IPP L S L ++L LS N+ SG++P+ +G+L L L + N+L GEIP+ L
Sbjct: 407 TGKIPPTLSNCSEL-VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV 465
Query: 118 VRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYND 177
LE L + N G IPS LS+ L + LS N L GEIP+++ L IL LS N
Sbjct: 466 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNS 525
Query: 178 LEGVVPIK 185
G +P +
Sbjct: 526 FSGNIPAE 533
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 91/194 (46%), Gaps = 35/194 (18%)
Query: 2 LELQGKKLLGNIPLSIGNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTI 61
L LQ G IP ++ N L+ L LS N+L G I +SLG + ++L N L G I
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 62 PPELIGLSSL-----------------------LIALDLSRNHFSGSLPTEVGNLKNLGI 98
P EL+ + +L L + LS N +G +P +G L+NL I
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 518
Query: 99 LNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEI 158
L +S N +G IP LG C L LD+ NLF+G IP+++ G +A +
Sbjct: 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN---------- 568
Query: 159 PEFLAGFRLLQILN 172
F+AG R + I N
Sbjct: 569 --FIAGKRYVYIKN 580
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 101/239 (42%), Gaps = 45/239 (18%)
Query: 2 LELQGKKLLGNIPLSIGNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTI 61
+ L +L G IP IG L+ L L LS+N GNI LG C + ++L+ N +GTI
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 62 PPELIGLSSLLIA---------------------------------------------LD 76
P + S + A +
Sbjct: 555 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN 614
Query: 77 LSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPS 136
++ + G N ++ L++S N+L+G IP+ +GS L L++ N G IP
Sbjct: 615 ITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 674
Query: 137 SLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDLEGVVPIKGLCGVIPELQ 195
+ LRGL LDLS N L G IP+ ++ +L ++LS N+L G +P G P +
Sbjct: 675 EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAK 733
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 23 LIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSLLIALDLSRNHF 82
L +L L +N G I +L C V + LS N+LSGTIP L LS L L L N
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLR-DLKLWLNML 454
Query: 83 SGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLR 142
G +P E+ +K L L + N L GEIP L +C L + + N G IP + L
Sbjct: 455 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLE 514
Query: 143 GLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDLEGVVP 183
L L LS N+ G IP L R L L+L+ N G +P
Sbjct: 515 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 2 LELQGKKLLGNIPLSI-GNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGT 60
L L K G IP + G L LDLS N G + G C + LS+N+ SG
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 61 IPPELIGLSSLLIALDLSRNHFSGSLPTEVGNLK-------------------------- 94
+P + + L LDLS N FSG LP + NL
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393
Query: 95 -NLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNN 153
L L + N G+IP +L +C L L + N G IPSSL SL L L L N
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453
Query: 154 LLGEIPEFLAGFRLLQILNLSYNDLEGVVP 183
L GEIP+ L + L+ L L +NDL G +P
Sbjct: 454 LEGEIPQELMYVKTLETLILDFNDLTGEIP 483
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 117/256 (45%), Gaps = 21/256 (8%)
Query: 1 ILELQGKKLLGNIPLSIGNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGT 60
L++ IP +G+ L LD+S N L G+ ++ C + +S+N G
Sbjct: 204 FLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP 262
Query: 61 IPPELIGLSSLLIALDLSRNHFSGSLPTEV-GNLKNLGILNVSKNLLAGEIPRSLGSCVR 119
IPP + L SL L L+ N F+G +P + G L L++S N G +P GSC
Sbjct: 263 IPP--LPLKSLQY-LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319
Query: 120 LEQLDMQGNLFHGHIP-SSLSSLRGLVALDLSQNNLLGEIPEFLAGFRL-LQILNLSYND 177
LE L + N F G +P +L +RGL LDLS N GE+PE L L L+LS N+
Sbjct: 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNN 379
Query: 178 LEGVVPIKGLCGVIPELQQPKCT------KNNSSNQKISKGLK-VIIISTVSFFFKIVHG 230
G + + LC Q PK T +NN KI L + ++ F + G
Sbjct: 380 FSGPI-LPNLC------QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 432
Query: 231 ASKSFIAECKALRNVR 246
S + LR+++
Sbjct: 433 TIPSSLGSLSKLRDLK 448
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 32/187 (17%)
Query: 23 LIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSLLIALDLSRNHF 82
L L +S N + G++ S +C +++S+N+ S IP +G S L LD+S N
Sbjct: 180 LKHLAISGNKISGDVDVS--RCVNLEFLDVSSNNFSTGIP--FLGDCSALQHLDISGNKL 235
Query: 83 SGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLS-SL 141
SG + L +LN+S N G IP L+ L + N F G IP LS +
Sbjct: 236 SGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGAC 293
Query: 142 RGLVALDLSQNNLLGEIPEF-------------------------LAGFRLLQILNLSYN 176
L LDLS N+ G +P F L R L++L+LS+N
Sbjct: 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN 353
Query: 177 DLEGVVP 183
+ G +P
Sbjct: 354 EFSGELP 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 93/205 (45%), Gaps = 38/205 (18%)
Query: 23 LIQLDLSDNFLEGNIQT--SLGKCERFVQIELSNNHLSGTIPPELIG---LSSLLIALDL 77
L LDLS N L G + T SLG C + +S+N L P ++ G L+SL + LDL
Sbjct: 102 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEV-LDL 158
Query: 78 SRNHFSGS------LPTEVGNLKNLGI-------------------LNVSKNLLAGEIPR 112
S N SG+ L G LK+L I L+VS N + IP
Sbjct: 159 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF 218
Query: 113 SLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILN 172
LG C L+ LD+ GN G ++S+ L L++S N +G IP + LQ L+
Sbjct: 219 -LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLS 275
Query: 173 LSYNDLEGVVP--IKGLCGVIPELQ 195
L+ N G +P + G C + L
Sbjct: 276 LAENKFTGEIPDFLSGACDTLTGLD 300
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 35/159 (22%)
Query: 52 LSNNHLSGTIPPELIGLSSLLIALDLSRNHFSGSLP--TEVGNLKNLGILNVSKNLL--A 107
LSN+H++G++ S+ L +LDLSRN SG + T +G+ L LNVS N L
Sbjct: 84 LSNSHINGSV--SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFP 141
Query: 108 GEIPRSL--------------------------GSCVRLEQLDMQGNLFHGHIPSSLSSL 141
G++ L C L+ L + GN G + +S
Sbjct: 142 GKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRC 199
Query: 142 RGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDLEG 180
L LD+S NN IP FL LQ L++S N L G
Sbjct: 200 VNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSG 237
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 102/188 (54%), Gaps = 4/188 (2%)
Query: 1 ILELQGKKLLGNIPLSIGNLKI-LIQLDLSDNFLEGNIQTSLGKCER--FVQIELSNNHL 57
+L+L + G +P S+ NL L+ LDLS N G I +L + + ++ L NN
Sbjct: 344 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGF 403
Query: 58 SGTIPPELIGLSSLLIALDLSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSC 117
+G IPP L S L ++L LS N+ SG++P+ +G+L L L + N+L GEIP+ L
Sbjct: 404 TGKIPPTLSNCSEL-VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV 462
Query: 118 VRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYND 177
LE L + N G IPS LS+ L + LS N L GEIP+++ L IL LS N
Sbjct: 463 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNS 522
Query: 178 LEGVVPIK 185
G +P +
Sbjct: 523 FSGNIPAE 530
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 91/194 (46%), Gaps = 35/194 (18%)
Query: 2 LELQGKKLLGNIPLSIGNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTI 61
L LQ G IP ++ N L+ L LS N+L G I +SLG + ++L N L G I
Sbjct: 396 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 455
Query: 62 PPELIGLSSL-----------------------LIALDLSRNHFSGSLPTEVGNLKNLGI 98
P EL+ + +L L + LS N +G +P +G L+NL I
Sbjct: 456 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 515
Query: 99 LNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEI 158
L +S N +G IP LG C L LD+ NLF+G IP+++ G +A +
Sbjct: 516 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN---------- 565
Query: 159 PEFLAGFRLLQILN 172
F+AG R + I N
Sbjct: 566 --FIAGKRYVYIKN 577
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 101/239 (42%), Gaps = 45/239 (18%)
Query: 2 LELQGKKLLGNIPLSIGNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTI 61
+ L +L G IP IG L+ L L LS+N GNI LG C + ++L+ N +GTI
Sbjct: 492 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 551
Query: 62 PPELIGLSSLLIA---------------------------------------------LD 76
P + S + A +
Sbjct: 552 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN 611
Query: 77 LSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPS 136
++ + G N ++ L++S N+L+G IP+ +GS L L++ N G IP
Sbjct: 612 ITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 671
Query: 137 SLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDLEGVVPIKGLCGVIPELQ 195
+ LRGL LDLS N L G IP+ ++ +L ++LS N+L G +P G P +
Sbjct: 672 EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAK 730
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 23 LIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSLLIALDLSRNHF 82
L +L L +N G I +L C V + LS N+LSGTIP L LS L L L N
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLR-DLKLWLNML 451
Query: 83 SGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLR 142
G +P E+ +K L L + N L GEIP L +C L + + N G IP + L
Sbjct: 452 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLE 511
Query: 143 GLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDLEGVVP 183
L L LS N+ G IP L R L L+L+ N G +P
Sbjct: 512 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 2 LELQGKKLLGNIPLSI-GNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGT 60
L L K G IP + G L LDLS N G + G C + LS+N+ SG
Sbjct: 271 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 61 IPPELIGLSSLLIALDLSRNHFSGSLPTEVGNLK-------------------------- 94
+P + + L LDLS N FSG LP + NL
Sbjct: 331 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 390
Query: 95 -NLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNN 153
L L + N G+IP +L +C L L + N G IPSSL SL L L L N
Sbjct: 391 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 450
Query: 154 LLGEIPEFLAGFRLLQILNLSYNDLEGVVP 183
L GEIP+ L + L+ L L +NDL G +P
Sbjct: 451 LEGEIPQELMYVKTLETLILDFNDLTGEIP 480
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 117/256 (45%), Gaps = 21/256 (8%)
Query: 1 ILELQGKKLLGNIPLSIGNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGT 60
L++ IP +G+ L LD+S N L G+ ++ C + +S+N G
Sbjct: 201 FLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP 259
Query: 61 IPPELIGLSSLLIALDLSRNHFSGSLPTEV-GNLKNLGILNVSKNLLAGEIPRSLGSCVR 119
IPP + L SL L L+ N F+G +P + G L L++S N G +P GSC
Sbjct: 260 IPP--LPLKSLQY-LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 316
Query: 120 LEQLDMQGNLFHGHIP-SSLSSLRGLVALDLSQNNLLGEIPEFLAGFRL-LQILNLSYND 177
LE L + N F G +P +L +RGL LDLS N GE+PE L L L+LS N+
Sbjct: 317 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNN 376
Query: 178 LEGVVPIKGLCGVIPELQQPKCT------KNNSSNQKISKGLK-VIIISTVSFFFKIVHG 230
G + + LC Q PK T +NN KI L + ++ F + G
Sbjct: 377 FSGPI-LPNLC------QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 429
Query: 231 ASKSFIAECKALRNVR 246
S + LR+++
Sbjct: 430 TIPSSLGSLSKLRDLK 445
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 23 LIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSLLIALDLSRNHF 82
L L +S N + G++ S +C +++S+N+ S IP +G S L LD+S N
Sbjct: 177 LKHLAISGNKISGDVDVS--RCVNLEFLDVSSNNFSTGIP--FLGDCSALQHLDISGNKL 232
Query: 83 SGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLS-SL 141
SG + L +LN+S N G IP L+ L + N F G IP LS +
Sbjct: 233 SGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGAC 290
Query: 142 RGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDLEGVVPIKGL 187
L LDLS N+ G +P F LL+ L LS N+ G +P+ L
Sbjct: 291 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTL 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 93/205 (45%), Gaps = 38/205 (18%)
Query: 23 LIQLDLSDNFLEGNIQT--SLGKCERFVQIELSNNHLSGTIPPELIG---LSSLLIALDL 77
L LDLS N L G + T SLG C + +S+N L P ++ G L+SL + LDL
Sbjct: 99 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEV-LDL 155
Query: 78 SRNHFSGS------LPTEVGNLKNLGI-------------------LNVSKNLLAGEIPR 112
S N SG+ L G LK+L I L+VS N + IP
Sbjct: 156 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF 215
Query: 113 SLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILN 172
LG C L+ LD+ GN G ++S+ L L++S N +G IP + LQ L+
Sbjct: 216 -LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLS 272
Query: 173 LSYNDLEGVVP--IKGLCGVIPELQ 195
L+ N G +P + G C + L
Sbjct: 273 LAENKFTGEIPDFLSGACDTLTGLD 297
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 35/159 (22%)
Query: 52 LSNNHLSGTIPPELIGLSSLLIALDLSRNHFSGSLP--TEVGNLKNLGILNVSKNLL--A 107
LSN+H++G++ S+ L +LDLSRN SG + T +G+ L LNVS N L
Sbjct: 81 LSNSHINGSV--SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFP 138
Query: 108 GEIPRSL--------------------------GSCVRLEQLDMQGNLFHGHIPSSLSSL 141
G++ L C L+ L + GN G + +S
Sbjct: 139 GKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRC 196
Query: 142 RGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDLEG 180
L LD+S NN IP FL LQ L++S N L G
Sbjct: 197 VNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSG 234
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
Query: 11 GNIPLSIGNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSS 70
G IP + +K L+ LD S N L G + S+ V I N +SG IP S
Sbjct: 115 GAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSK 174
Query: 71 LLIALDLSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLF 130
L ++ +SRN +G +P NL NL +++S+N+L G+ GS +++ + N
Sbjct: 175 LFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL 233
Query: 131 HGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDLEGVVPIKG 186
+ + + L LDL N + G +P+ L + L LN+S+N+L G +P G
Sbjct: 234 AFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Query: 13 IPLSIGNLKILIQLDLSD-NFLEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSL 71
IP S+ NL L L + N L G I ++ K + + +++ ++SG I P+ +
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAI-PDFLSQIKT 126
Query: 72 LIALDLSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRL-EQLDMQGNLF 130
L+ LD S N SG+LP + +L NL + N ++G IP S GS +L + + N
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 131 HGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDLE 179
G IP + ++L L +DLS+N L G+ + Q ++L+ N L
Sbjct: 187 TGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 66/156 (42%), Gaps = 10/156 (6%)
Query: 38 QTSLGK-CERFVQIELSNN-HLSG-------TIPPELIGLSSLLIALDLSRNHFSGSLPT 88
+T LG C+ Q NN LSG IP L L L N+ G +P
Sbjct: 36 RTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPP 95
Query: 89 EVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALD 148
+ L L L ++ ++G IP L L LD N G +P S+SSL LV +
Sbjct: 96 AIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155
Query: 149 LSQNNLLGEIPEFLAGF-RLLQILNLSYNDLEGVVP 183
N + G IP+ F +L + +S N L G +P
Sbjct: 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP 191
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH C I+H D+K +N+LLD + A VGDFGLA
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 181
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH C I+H D+K +N+LLD + A VGDFGLA
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 189
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQ 311
DYLH + I+H DLK +N+ L DLT +GDFGLA S +Q
Sbjct: 146 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 190
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQ 311
DYLH + I+H DLK +N+ L DLT +GDFGLA S +Q
Sbjct: 145 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 189
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQ 311
DYLH + I+H DLK +N+ L DLT +GDFGLA S +Q
Sbjct: 120 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 164
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQ 311
DYLH + I+H DLK +N+ L DLT +GDFGLA S +Q
Sbjct: 123 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 167
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQ 311
DYLH + I+H DLK +N+ L DLT +GDFGLA S +Q
Sbjct: 123 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 167
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DYLH + I+H DLK +N+ L DLT +GDFGLA
Sbjct: 146 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DYLH + I+H DLK +N+ L DLT +GDFGLA
Sbjct: 138 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQ 311
DYLH + I+H DLK +N+ L DLT +GDFGLA S +Q
Sbjct: 118 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQ 311
DYLH + I+H DLK +N+ L DLT +GDFGLA S +Q
Sbjct: 118 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DYLH + I+H DLK +N+ L DLT +GDFGLA
Sbjct: 118 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 217 IISTVSFFFKIVHGASK----SFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQE 272
+IST + FF ++ S +I + + + + L + + S DY H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAV-----DYCH---RH 130
Query: 273 PILHCDLKPSNVLLDNDLTAYVGDFGLA 300
++H DLKP NVLLD + A + DFGL+
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLS 158
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 217 IISTVSFFFKIVHGASK----SFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQE 272
+IST + FF ++ S +I + + + + L + + S DY H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAV-----DYCH---RH 130
Query: 273 PILHCDLKPSNVLLDNDLTAYVGDFGLA 300
++H DLKP NVLLD + A + DFGL+
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLS 158
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQ 311
DYLH + I+H DLK +N+ L D T +GDFGLA S +Q
Sbjct: 122 DYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQ 166
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DYLH + I+H DLK +N+ L D T +GDFGLA
Sbjct: 134 DYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Query: 265 YLHHDC--------QEPILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
YLH D + I H D K NVLL +DLTA + DFGLA+
Sbjct: 127 YLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAV 171
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DYLH + I+H DLK +N+ L D T +GDFGLA
Sbjct: 134 DYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 7/44 (15%)
Query: 265 YLHHDC-------QEPILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
YLH D + I H D+K NVLL N+LTA + DFGLA+
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 250 LVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
++RV+T + + + D +LH DLKP+NV LD +GDFGLA
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 250 LVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
++RV+T + + + D +LH DLKP+NV LD +GDFGLA
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 15/203 (7%)
Query: 2 LELQGKKLLGNIPLSIGNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTI 61
L+L L G +P + L +L +L LS N + Q S + ++ G +
Sbjct: 280 LDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHL-----YIRGNV 333
Query: 62 PPELIGLSSL-----LIALDLSRNHFSGS--LPTEVGNLKNLGILNVSKNLLAGEIPRSL 114
+G+ L L LDLS N S ++ NL +L LN+S N G ++
Sbjct: 334 KKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAF 393
Query: 115 GSCVRLEQLDMQGNLFHGHIPSS-LSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNL 173
C +LE LD+ H + P S +L L L+L+ L LAG +L+ LNL
Sbjct: 394 KECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPVLRHLNL 453
Query: 174 SYNDLE-GVVPIKGLCGVIPELQ 195
N + G + L + L+
Sbjct: 454 KGNHFQDGTITKTNLLQTVGSLE 476
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 250 LVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
++RV+T + + + D +LH DLKP+NV LD +GDFGLA
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D+LH +C I+H DLKP N+L+ + T + DFGLA
Sbjct: 134 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 167
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D+LH +C I+H DLKP N+L+ + T + DFGLA
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DY H + ++H DLKP NVLLD + A + DFGL+
Sbjct: 130 DYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLS 163
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D+LH +C I+H DLKP N+L+ + T + DFGLA
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DYLH + I+H D+K +N+ L LT +GDFGLA
Sbjct: 146 DYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D+LH +C I+H DLKP N+L+ + T + DFGLA
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+YLH Q ILH DLKP+N+LLD + + DFGLA
Sbjct: 126 EYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLA 159
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 26 LDLSDNFLEGNIQTSLGKCERFVQI-----ELSNNHLSGTIPPELIGLSSLLIALDLSRN 80
L LS+N L +L R Q+ EL+ + GT+P +L LDLS N
Sbjct: 37 LHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLP--------VLGTLDLSHN 88
Query: 81 HFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSS 140
SLP L L +L+VS N L +L L++L ++GN P L+
Sbjct: 89 QLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTP 147
Query: 141 LRGLVALDLSQNNLLGEIPE-FLAGFRLLQILNLSYNDLEGVVPIKGLCG 189
L L L+ NN L E+P L G L L L N L + KG G
Sbjct: 148 TPKLEKLSLANNN-LTELPAGLLNGLENLDTLLLQENSLYTIP--KGFFG 194
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 26 LDLSDNFLEGNIQTSLGKCERFVQI-----ELSNNHLSGTIPPELIGLSSLLIALDLSRN 80
L LS+N L +L R Q+ EL+ + GT+P +L LDLS N
Sbjct: 36 LHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLP--------VLGTLDLSHN 87
Query: 81 HFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSS 140
SLP L L +L+VS N L +L L++L ++GN P L+
Sbjct: 88 QLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTP 146
Query: 141 LRGLVALDLSQNNLLGEIPE-FLAGFRLLQILNLSYNDLEGVVPIKGLCG 189
L L L+ NN L E+P L G L L L N L + KG G
Sbjct: 147 TPKLEKLSLANNN-LTELPAGLLNGLENLDTLLLQENSLYTIP--KGFFG 193
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 18 GNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSLLIALDL 77
NL++LI N +EG+ SLG E ++LS+NHLS ++ G S L L+L
Sbjct: 76 ANLQVLILKSSRINTIEGDAFYSLGSLE---HLDLSDNHLS-SLSSSWFGPLSSLKYLNL 131
Query: 78 SRNHFSG-SLPTEVGNLKNLGILNVSKNLLAGEIPR-SLGSCVRLEQLDMQGNLFHGHIP 135
N + + + NL NL L + EI R L +L+++ +
Sbjct: 132 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQS 191
Query: 136 SSLSSLRGL--VALDLSQNNLLGEI-PEFLAGFRLLQI 170
SL S+R + + L LS++ L EI + L+ R L++
Sbjct: 192 QSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLEL 229
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 48 VQIELSNNHLSGTIPPELIGLSSLLIALDLSRNHFSGS-LPTEVGNLKNLGILNVSKNLL 106
+ +++S+ H GLSSL + L ++ N F + LP L+NL L++S+ L
Sbjct: 129 IYLDISHTHTRVAFNGIFNGLSSLEV-LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187
Query: 107 AGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGF- 165
P + S L+ L+M N F L L LD S N+++ + L F
Sbjct: 188 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP 247
Query: 166 RLLQILNLSYNDLEGVVPIKGLCGVIPELQQ 196
L LNL+ ND + I + +Q
Sbjct: 248 SSLAFLNLTQNDFACTCEHQSFLQWIKDQRQ 278
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 24 IQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLS--GTIPPELIGLSSLLIALDLSRNH 81
+L+L N L+ K + ++ LS+N LS G G +SL LDLS N
Sbjct: 31 TRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY-LDLSFN- 88
Query: 82 FSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQ-GNLFHGHIPSSLSS 140
G++ +S N L E +LE LD Q NL S S
Sbjct: 89 ---------------GVITMSSNFLGLE---------QLEHLDFQHSNLKQMSEFSVFLS 124
Query: 141 LRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDL-EGVVP 183
LR L+ LD+S + G L++L ++ N E +P
Sbjct: 125 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP 168
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 266 LHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
L H Q I++ DLKP NVLLD+D + D GLA+
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA-IFCQGVSNLNQSNC 314
+Y H + I+H DLKP N+LLD++L + DFGL+ I G N +++C
Sbjct: 122 EYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG--NFLKTSC 168
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 18 GNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSLLIALDL 77
NL++LI N +EG+ SLG E ++LS+NHLS ++ G S L L+L
Sbjct: 50 ANLQVLILKSSRINTIEGDAFYSLGSLE---HLDLSDNHLS-SLSSSWFGPLSSLKYLNL 105
Query: 78 SRNHFSG-SLPTEVGNLKNLGILNVSKNLLAGEIPR-SLGSCVRLEQLDMQGNLFHGHIP 135
N + + + NL NL L + EI R L +L+++ +
Sbjct: 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQS 165
Query: 136 SSLSSLRGL--VALDLSQNNLLGEI-PEFLAGFRLLQI 170
SL S+R + + L LS++ L EI + L+ R L++
Sbjct: 166 QSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLEL 203
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 266 LHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
L H Q I++ DLKP NVLLD+D + D GLA+
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 92 NLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFH-GHIPSSLSSLRGLVALDLS 150
+L+NL L++S LE L M GN F +P + LR L LDLS
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478
Query: 151 QNNLLGEIPEFLAGFRLLQILNLSYNDLEGV 181
Q L P LQ+LN++ N L+ V
Sbjct: 479 QCQLEQLSPTAFNSLSSLQVLNMASNQLKSV 509
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 48 VQIELSNNHLSGTIPPELIGLSSLLIALDLSRNHFSGS-LPTEVGNLKNLGILNVSKNLL 106
+ +++S+ H GLSSL + L ++ N F + LP L+NL L++S+ L
Sbjct: 424 IYLDISHTHTRVAFNGIFNGLSSLEV-LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 482
Query: 107 AGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGF- 165
P + S L+ L+M N F L L LD S N+++ + L F
Sbjct: 483 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP 542
Query: 166 RLLQILNLSYNDLEGVVPIKGLCGVIPELQQ 196
L LNL+ ND + I + +Q
Sbjct: 543 SSLAFLNLTQNDFACTCEHQSFLQWIKDQRQ 573
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 21/121 (17%)
Query: 75 LDLSRNHFS----------GSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLD 124
LDLSRN S G+ + +L G++ +S N L E +LE LD
Sbjct: 352 LDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLE---------QLEHLD 402
Query: 125 MQ-GNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDL-EGVV 182
Q NL S SLR L+ LD+S + G L++L ++ N E +
Sbjct: 403 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL 462
Query: 183 P 183
P
Sbjct: 463 P 463
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 266 LHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
L H Q I++ DLKP NVLLD+D + D GLA+
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 48 VQIELSNNHLSGTIPPELIGLSSLLIALDLSRNHFSGS-LPTEVGNLKNLGILNVSKNLL 106
+ +++S+ H GLSSL + L ++ N F + LP L+NL L++S+ L
Sbjct: 448 IYLDISHTHTRVAFNGIFNGLSSLEV-LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 506
Query: 107 AGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGF- 165
P + S L+ L+M N F L L LD S N+++ + L F
Sbjct: 507 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP 566
Query: 166 RLLQILNLSYNDLEGVVPIKGLCGVIPELQQ 196
L LNL+ ND + I + +Q
Sbjct: 567 SSLAFLNLTQNDFACTCEHQSFLQWIKDQRQ 597
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 21/121 (17%)
Query: 75 LDLSRNHFS----------GSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLD 124
LDLSRN S G++ + +L G++ +S N L E +LE LD
Sbjct: 376 LDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLE---------QLEHLD 426
Query: 125 MQ-GNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDL-EGVV 182
Q NL S SLR L+ LD+S + G L++L ++ N E +
Sbjct: 427 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL 486
Query: 183 P 183
P
Sbjct: 487 P 487
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 266 LHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
L H Q I++ DLKP NVLLD+D + D GLA+
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 26 LDLSDNFLEGNIQTSLGKCERFVQI-----ELSNNHLSGTIPPELIGLSSLLIALDLSRN 80
L LS+N L +L R Q+ EL+ + GT+P +L LDLS N
Sbjct: 36 LHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLP--------VLGTLDLSHN 87
Query: 81 HFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSS 140
SLP L L +L+VS N L +L L++L ++GN P L+
Sbjct: 88 QLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTP 146
Query: 141 LRGLVALDLSQNNLLGEIPE-FLAGFRLLQILNLSYNDLEGVVPIKGLCG 189
L L L+ NN L E+P L G L L L N L + KG G
Sbjct: 147 TPKLEKLSLANNN-LTELPAGLLNGLENLDTLLLQENSLYTIP--KGFFG 193
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 26 LDLSDNFLEGNIQTSLGKCERFVQI-----ELSNNHLSGTIPPELIGLSSLLIALDLSRN 80
L LS+N L +L R Q+ EL+ + GT+P +L LDLS N
Sbjct: 36 LHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLP--------VLGTLDLSHN 87
Query: 81 HFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSS 140
SLP L L +L+VS N L +L L++L ++GN P L+
Sbjct: 88 QLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTP 146
Query: 141 LRGLVALDLSQNNLLGEIPE-FLAGFRLLQILNLSYNDLEGVVPIKGLCG 189
L L L+ NN L E+P L G L L L N L + KG G
Sbjct: 147 TPKLEKLSLANNN-LTELPAGLLNGLENLDTLLLQENSLYTIP--KGFFG 193
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 26 LDLSDNFLEGNIQTSLGKCERFVQI-----ELSNNHLSGTIPPELIGLSSLLIALDLSRN 80
L LS+N L +L R Q+ EL+ + GT+P +L LDLS N
Sbjct: 36 LHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLP--------VLGTLDLSHN 87
Query: 81 HFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSS 140
SLP L L +L+VS N L +L L++L ++GN P L+
Sbjct: 88 QLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTP 146
Query: 141 LRGLVALDLSQNNLLGEIPE-FLAGFRLLQILNLSYNDLEGVVPIKGLCG 189
L L L+ NN L E+P L G L L L N L + KG G
Sbjct: 147 TPKLEKLSLANNN-LTELPAGLLNGLENLDTLLLQENSLYTIP--KGFFG 193
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
Y+H + I+H DLKP N+ +D +GDFGLA
Sbjct: 131 YIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQ 304
I+H DLKP N+LLD+D+ + DFG + CQ
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFS--CQ 173
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQ 304
I+H DLKP N+LLD+D+ + DFG + CQ
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFS--CQ 173
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQ 304
I+H DLKP N+LLD+D+ + DFG + CQ
Sbjct: 132 IVHRDLKPENILLDDDMNIKLTDFGFS--CQ 160
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
Y+H + I+H DLKP N+ +D +GDFGLA
Sbjct: 131 YIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSNCI 315
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSNCI 315
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 147 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSNCI 315
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 124 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 170
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA-IFCQGVSNLNQSNC 314
+Y H + I+H DLKP N+LLD L + DFGL+ I G N +++C
Sbjct: 127 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSC 173
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 123 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 169
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 235 FIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYV 294
++ E AL ++++R L S +LH + I+H DLKP N+LLD+++ +
Sbjct: 190 YLTEKVALSEKETRSIMRSLLEAVS-----FLHANN---IVHRDLKPENILLDDNMQIRL 241
Query: 295 GDFGLA 300
DFG +
Sbjct: 242 SDFGFS 247
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 26 LDLSDNFLEGNIQTSLGKCERFVQI-----ELSNNHLSGTIPPELIGLSSLLIALDLSRN 80
L LS+N L +L R Q+ EL+ + GT+P +L LDLS N
Sbjct: 36 LHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLP--------VLGTLDLSHN 87
Query: 81 HFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSS 140
SLP L L +L+VS N L +L L++L ++GN P L+
Sbjct: 88 QLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTP 146
Query: 141 LRGLVALDLSQNNLLGEIPE-FLAGFRLLQILNLSYNDLEGVVPIKGLCG 189
L L L+ NN L E+P L G L L L N L + KG G
Sbjct: 147 TPKLEKLSLA-NNDLTELPAGLLNGLENLDTLLLQENSLYTIP--KGFFG 193
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 268 HDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSNCI 315
HD + I+H D+KP N+L+D++ T + DFG+A S L Q+N +
Sbjct: 128 HDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS-LTQTNHV 172
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA-IFCQGVSNLNQSNC 314
+Y H + I+H DLKP N+LLD L + DFGL+ I G N +++C
Sbjct: 126 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSC 172
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 122 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 168
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 147 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 121 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 167
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA-IFCQGVSNLNQSNC 314
+Y H + I+H DLKP N+LLD L + DFGL+ I G N +++C
Sbjct: 117 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSC 163
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 149 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 195
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA-IFCQGVSNLNQSNC 314
+Y H + I+H DLKP N+LLD L + DFGL+ I G N +++C
Sbjct: 121 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSC 167
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH + I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 128 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 174
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH + +H DL NVLLDND +GDFGLA
Sbjct: 149 YLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLA 166
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSNCI 315
+YLH + I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 143 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH + I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 151 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 197
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSN 313
+YLH + I+H DLKP N+LL+ D+ + DFG A S ++N
Sbjct: 143 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 189
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLA 175
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+YLH+ PI+H DLK N+L+D T V DFGL+
Sbjct: 151 NYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
DY+H + ++H DLKPSN+ L + +GDFGL
Sbjct: 150 DYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGL 182
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLA 171
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 256 SCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+ + I+F HH +H D+K +N+LLD TA + DFGLA
Sbjct: 142 AANGINFLHENHH------IHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 256 SCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+ + I+F HH +H D+K +N+LLD TA + DFGLA
Sbjct: 142 AANGINFLHENHH------IHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
ILH DLKP+N L++ D + V DFGLA
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLA 178
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 266 LHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
L H ILH D+K N+ L D T +GDFG+A
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIA 172
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 256 SCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+ + I+F HH +H D+K +N+LLD TA + DFGLA
Sbjct: 136 AANGINFLHENHH------IHRDIKSANILLDEAFTAKISDFGLA 174
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLA 172
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLA 166
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLA 211
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 34.7 bits (78), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 34.7 bits (78), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 256 SCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+ + I+F HH +H D+K +N+LLD TA + DFGLA
Sbjct: 133 AANGINFLHENHH------IHRDIKSANILLDEAFTAKISDFGLA 171
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+++ +D T + DFGLA
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLA 211
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 34.7 bits (78), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 268 HDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
H Q ILH DLKP N+L+++D + DFGLA
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLA 166
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 34.7 bits (78), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKP+N LL+ D + V DFGLA
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 268 HDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
H Q ILH DLKP N+L+++D + DFGLA
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLA 166
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
Y+H + I+H +LKP N+ +D +GDFGLA
Sbjct: 131 YIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLA 163
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 18/78 (23%)
Query: 223 FFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPS 282
F + + HG K A K + +V + C Q+ I+H DLK
Sbjct: 99 FDYLVAHGRMKEKEARSK------FRQIVSAVQYCH------------QKRIVHRDLKAE 140
Query: 283 NVLLDNDLTAYVGDFGLA 300
N+LLD D+ + DFG +
Sbjct: 141 NLLLDADMNIKIADFGFS 158
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 18/78 (23%)
Query: 223 FFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPS 282
F + + HG K A K + +V + C Q+ I+H DLK
Sbjct: 102 FDYLVAHGRMKEKEARAK------FRQIVSAVQYCH------------QKYIVHRDLKAE 143
Query: 283 NVLLDNDLTAYVGDFGLA 300
N+LLD D+ + DFG +
Sbjct: 144 NLLLDGDMNIKIADFGFS 161
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSNC 314
YLH + ++H DLK N+ L+ DL +GDFGLA + ++ C
Sbjct: 132 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC 178
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 268 HDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
H Q ++H DLKPSN+L++ + +GDFG+A
Sbjct: 175 HSAQ--VIHRDLKPSNLLVNENCELKIGDFGMA 205
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH + ++H DLK N+ L+ DL +GDFGLA
Sbjct: 132 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKP+N LL+ D + + DFGLA
Sbjct: 152 IIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 271 QEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
Q+ I+H DLK N+LLD D+ + DFG +
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVS 307
+YLH + I++ DLKP N+LLD + + DFG A + V+
Sbjct: 120 EYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 160
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 268 HDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
H Q ++H DLKPSN+L++ + +GDFG+A
Sbjct: 176 HSAQ--VIHRDLKPSNLLVNENCELKIGDFGMA 206
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSNC 314
YLH + ++H DLK N+ L+ DL +GDFGLA + ++ C
Sbjct: 136 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC 182
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH + ++H DLK N+ L+ DL +GDFGLA
Sbjct: 156 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH + ++H DLK N+ L+ DL +GDFGLA
Sbjct: 154 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH + ++H DLK N+ L+ DL +GDFGLA
Sbjct: 130 YLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 50 IELSNNHLSGTIPPELIGLSSLLIALDLSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGE 109
+ L++N L +PP S L LD N S P L L +LN+ N L+
Sbjct: 30 LNLTHNQLR-RLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQI 88
Query: 110 IPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNL 154
++ C L +LD+ N H + + + L+ LDLS N L
Sbjct: 89 SDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGL 133
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 135 PSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDL 178
PS LR L LDLS NN+ + L G L+IL+ +N+L
Sbjct: 473 PSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNL 516
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGL 299
++H DLKPSN+ D VGDFGL
Sbjct: 139 LMHRDLKPSNIFFTMDDVVKVGDFGL 164
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGL 299
++H DLKPSN+ D VGDFGL
Sbjct: 185 LMHRDLKPSNIFFTMDDVVKVGDFGL 210
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 18/78 (23%)
Query: 223 FFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPS 282
F + + HG K E +A + + +V + C Q+ I+H DLK
Sbjct: 94 FDYLVAHGWMKE--KEARA----KFRQIVSAVQYCH------------QKFIVHRDLKAE 135
Query: 283 NVLLDNDLTAYVGDFGLA 300
N+LLD D+ + DFG +
Sbjct: 136 NLLLDADMNIKIADFGFS 153
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 41/135 (30%)
Query: 205 SNQKISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID 261
S+ + GLK+ + F I+H +K E + L++++H+N L+ V T +S++
Sbjct: 69 SSYDVKSGLKIAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPATSLE 126
Query: 262 -FQD-YL-HH----------DCQE-----------------------PILHCDLKPSNVL 285
F D YL H CQ+ I+H DLKPSN+
Sbjct: 127 EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 186
Query: 286 LDNDLTAYVGDFGLA 300
++ D + DFGLA
Sbjct: 187 VNEDCELKILDFGLA 201
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 243 RNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+NV K L C + DYL + + I+H D+KP N+LLD ++ DF +A
Sbjct: 108 QNVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIA 162
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 114 LGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNL 173
L + ++ +L++ GN S+++ L+ + LDL+ + P LAG LQ+L L
Sbjct: 81 LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYL 136
Query: 174 SYNDLEGVVPIKGLC 188
N + + P+ GL
Sbjct: 137 DLNQITNISPLAGLT 151
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH++ ++H DLK N+ L++D+ +GDFGLA
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH++ ++H DLK N+ L++D+ +GDFGLA
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 18/78 (23%)
Query: 223 FFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPS 282
F + + HG K A K + +V + C Q+ I+H DLK
Sbjct: 101 FDYLVAHGRMKEKEARAK------FRQIVSAVQYCH------------QKFIVHRDLKAE 142
Query: 283 NVLLDNDLTAYVGDFGLA 300
N+LLD D+ + DFG +
Sbjct: 143 NLLLDADMNIKIADFGFS 160
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 18/78 (23%)
Query: 223 FFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPS 282
F + + HG K A K + +V + C Q+ I+H DLK
Sbjct: 101 FDYLVAHGRMKEKEARAK------FRQIVSAVQYCH------------QKFIVHRDLKAE 142
Query: 283 NVLLDNDLTAYVGDFGLA 300
N+LLD D+ + DFG +
Sbjct: 143 NLLLDADMNIKIADFGFS 160
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH++ ++H DLK N+ L++D+ +GDFGLA
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 18/78 (23%)
Query: 223 FFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPS 282
F + + HG K A K + +V + C Q+ I+H DLK
Sbjct: 101 FDYLVAHGRMKEKEARAK------FRQIVSAVQYCH------------QKFIVHRDLKAE 142
Query: 283 NVLLDNDLTAYVGDFGLA 300
N+LLD D+ + DFG +
Sbjct: 143 NLLLDADMNIKIADFGFS 160
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIF 302
+YLH + Q +H D+K N+LL D + + DFG++ F
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAF 170
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 18/78 (23%)
Query: 223 FFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPS 282
F + + HG K A K + +V + C Q+ I+H DLK
Sbjct: 101 FDYLVAHGRMKEKEARAK------FRQIVSAVQYCH------------QKFIVHRDLKAE 142
Query: 283 NVLLDNDLTAYVGDFGLA 300
N+LLD D+ + DFG +
Sbjct: 143 NLLLDADMNIKIADFGFS 160
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH++ ++H DLK N+ L++D+ +GDFGLA
Sbjct: 141 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 18/78 (23%)
Query: 223 FFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPS 282
F + + HG K A K + +V + C Q+ I+H DLK
Sbjct: 101 FDYLVAHGRMKEKEARAK------FRQIVSAVQYCH------------QKFIVHRDLKAE 142
Query: 283 NVLLDNDLTAYVGDFGLA 300
N+LLD D+ + DFG +
Sbjct: 143 NLLLDADMNIKIADFGFS 160
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 31/191 (16%)
Query: 17 IGNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSLLIALD 76
+ NL L +L+LS N + ++L Q+ S+N ++ P L L++L LD
Sbjct: 125 LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLE-RLD 179
Query: 77 LSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPS 136
+S N S + + L NL L + N ++ P LG L++L + GN
Sbjct: 180 ISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--G 233
Query: 137 SLSSLRGLVALDLSQNNL--------LGEIPEF------------LAGFRLLQILNLSYN 176
+L+SL L LDL+ N + L ++ E LAG L L L+ N
Sbjct: 234 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 293
Query: 177 DLEGVVPIKGL 187
LE + PI L
Sbjct: 294 QLEDISPISNL 304
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIF 302
+YLH + Q +H D+K N+LL D + + DFG++ F
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAF 165
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 16/80 (20%)
Query: 225 FKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNV 284
F+IV A F+ +A+ + + ++ L C HD I+H D+KP NV
Sbjct: 115 FEIVKRADAGFVY-SEAVASHYMRQILEALRYC----------HDNN--IIHRDVKPENV 161
Query: 285 LL---DNDLTAYVGDFGLAI 301
LL +N +GDFG+AI
Sbjct: 162 LLASKENSAPVKLGDFGVAI 181
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 31/191 (16%)
Query: 17 IGNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSLLIALD 76
+ NL L +L+LS N + ++L Q+ S+N ++ P L L++L LD
Sbjct: 125 LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLE-RLD 179
Query: 77 LSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPS 136
+S N S + + L NL L + N ++ P LG L++L + GN
Sbjct: 180 ISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--G 233
Query: 137 SLSSLRGLVALDLSQNNL--------LGEIPEF------------LAGFRLLQILNLSYN 176
+L+SL L LDL+ N + L ++ E LAG L L L+ N
Sbjct: 234 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 293
Query: 177 DLEGVVPIKGL 187
LE + PI L
Sbjct: 294 QLEDISPISNL 304
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH D+KPSN+LL+ + V DFGL+
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLS 156
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 31/191 (16%)
Query: 17 IGNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSLLIALD 76
+ NL L +L+LS N + ++L Q+ S+N ++ P L L++L LD
Sbjct: 125 LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLE-RLD 179
Query: 77 LSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPS 136
+S N S + + L NL L + N ++ P LG L++L + GN
Sbjct: 180 ISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--G 233
Query: 137 SLSSLRGLVALDLSQNNL--------LGEIPEF------------LAGFRLLQILNLSYN 176
+L+SL L LDL+ N + L ++ E LAG L L L+ N
Sbjct: 234 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 293
Query: 177 DLEGVVPIKGL 187
LE + PI L
Sbjct: 294 QLEDISPISNL 304
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH + +H +L NVLLDND +GDFGLA
Sbjct: 132 YLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 72 LIALDLSRNHFSGS--LPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNL 129
L LDLS + S ++ NL++L LN+S N G ++ C +LE LD+
Sbjct: 351 LQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTH 410
Query: 130 FHGHIPSS-LSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDLE 179
H P S +L L L+LS L LAG + L+ LNL N +
Sbjct: 411 LHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQ 461
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 75 LDLSRNHFSGSLP-TEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFH-G 132
LD++ H P + NL L +LN+S LL L L L++QGN F G
Sbjct: 404 LDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDG 463
Query: 133 HIPSS--LSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDLEG 180
I + L + L L LS NLL + G R + L+LS+N L G
Sbjct: 464 SISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTG 513
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 77/192 (40%), Gaps = 28/192 (14%)
Query: 15 LSIGNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSLLIA 74
L + NL+ L L+LS N G + +C + ++++ HL P LL
Sbjct: 369 LQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRV 428
Query: 75 LDLSRNHFSGSLPTEVGNLKNLGILNVSKNLLA-GEIPRS-------------LGSCVRL 120
L+LS S + L++L LN+ N G I ++ L SC L
Sbjct: 429 LNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLL 488
Query: 121 E-------------QLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRL 167
LD+ N G +LS L+GL L+++ NN+ P L
Sbjct: 489 SIDQQAFHGLRNVNHLDLSHNSLTGDSMDALSHLKGLY-LNMASNNIRIIPPHLLPALSQ 547
Query: 168 LQILNLSYNDLE 179
I+NLS+N L+
Sbjct: 548 QSIINLSHNPLD 559
Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 75 LDLSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHI 134
LDL+ H +G LP+ + + +L L ++ N + S L L ++GN+ +
Sbjct: 282 LDLTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRKLDL 340
Query: 135 PSS-LSSLRGLVALDLSQNNLLGEIPEF----LAGFRLLQILNLSYNDLEGV 181
+ L L L LDLS +++ E + L R LQ LNLSYN+ G+
Sbjct: 341 GTRCLEKLENLQKLDLSHSDI--EASDCCNLQLKNLRHLQYLNLSYNEPLGL 390
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 13/148 (8%)
Query: 41 LGKCERFVQIELSNNHLSG-TIPPELIGLSSLLIALDLSRNHFSGSLPTEVGNLKNLGIL 99
L ++++S+N +S ++ +L L SL+ + N S P +G L NL L
Sbjct: 168 LANLTTLERLDISSNKVSDISVLAKLTNLESLIA----TNNQISDITP--LGILTNLDEL 221
Query: 100 NVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIP 159
+++ N L +L S L LD+ N P LS L L L L N + P
Sbjct: 222 SLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 277
Query: 160 EFLAGFRLLQILNLSYNDLEGVVPIKGL 187
LAG L L L+ N LE + PI L
Sbjct: 278 --LAGLTALTNLELNENQLEDISPISNL 303
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 274 ILHCDLKPSNVLLDN-DLTAYVGDFGLA 300
+LH DLKP+N+ ++ DL +GDFGLA
Sbjct: 141 VLHRDLKPANLFINTEDLVLKIGDFGLA 168
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH + +H +L NVLLDND +GDFGLA
Sbjct: 132 YLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 114 LGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNL 173
L + ++ +L++ GN S+++ L+ + LDL+ + P LAG LQ+L L
Sbjct: 87 LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYL 142
Query: 174 SYNDLEGVVPIKGLC 188
N + + P+ GL
Sbjct: 143 DLNQITNISPLAGLT 157
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSNV ++ D + DFGLA
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSNV ++ D + DFGLA
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLA 170
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+YLH+ + I+H D+KPSN+L+ D + DFG++
Sbjct: 151 EYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSNV ++ D + DFGLA
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 13/148 (8%)
Query: 41 LGKCERFVQIELSNNHLSG-TIPPELIGLSSLLIALDLSRNHFSGSLPTEVGNLKNLGIL 99
L ++++S+N +S ++ +L L SL+ + N S P +G L NL L
Sbjct: 168 LANLTTLERLDISSNKVSDISVLAKLTNLESLIA----TNNQISDITP--LGILTNLDEL 221
Query: 100 NVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIP 159
+++ N L +L S L LD+ N P LS L L L L N + P
Sbjct: 222 SLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 277
Query: 160 EFLAGFRLLQILNLSYNDLEGVVPIKGL 187
LAG L L L+ N LE + PI L
Sbjct: 278 --LAGLTALTNLELNENQLEDISPISNL 303
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+YLH+ PI+H +LK N+L+D T V DFGL+
Sbjct: 151 NYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 270 CQE-PILHCDLKPSNVLLDNDLTAYVGDFGLA 300
C E ILH DLKP N+L++ +GDFGLA
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 241 ALRNVRHKNLVRVLTSCSSIDFQDY-------LHHDCQEPILHCDLKPSNVLLDNDLTAY 293
A+ + H++ + +L S S + ++Y L Q I+H D+KPSN L + L Y
Sbjct: 98 AMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKY 157
Query: 294 V-GDFGLA 300
DFGLA
Sbjct: 158 ALVDFGLA 165
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLA 171
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 13/148 (8%)
Query: 41 LGKCERFVQIELSNNHLSG-TIPPELIGLSSLLIALDLSRNHFSGSLPTEVGNLKNLGIL 99
L ++++S+N +S ++ +L L SL+ + N S P +G L NL L
Sbjct: 173 LANLTTLERLDISSNKVSDISVLAKLTNLESLIA----TNNQISDITP--LGILTNLDEL 226
Query: 100 NVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIP 159
+++ N L +L S L LD+ N P LS L L L L N + P
Sbjct: 227 SLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 282
Query: 160 EFLAGFRLLQILNLSYNDLEGVVPIKGL 187
LAG L L L+ N LE + PI L
Sbjct: 283 --LAGLTALTNLELNENQLEDISPISNL 308
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 41 LGKCERFVQIELSNNHLSG-TIPPELIGLSSLLIALDLSRNHFSGSLPTEVGNLKNLGIL 99
L ++++S+N +S ++ +L L SL+ + N S P +G L NL L
Sbjct: 172 LANLTTLERLDISSNKVSDISVLAKLTNLESLIA----TNNQISDITP--LGILTNLDEL 225
Query: 100 NVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIP 159
+++ N L +I +L S L LD+ N P LS L L L L N + P
Sbjct: 226 SLNGNQLK-DI-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 281
Query: 160 EFLAGFRLLQILNLSYNDLEGVVPIKGL 187
LAG L L L+ N LE + PI L
Sbjct: 282 --LAGLTALTNLELNENQLEDISPISNL 307
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH + +H L NVLLDND +GDFGLA
Sbjct: 127 YLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLA 159
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH + +H L NVLLDND +GDFGLA
Sbjct: 126 YLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLA 158
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 266 LHHDCQEPILHCDLKPSNVLLDND---LTAYVGDFGLAIFCQG 305
++H Q I+H DLKP N+LL + + DFGLAI QG
Sbjct: 143 VNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 185
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 18/78 (23%)
Query: 223 FFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPS 282
F + + HG K A K + +V + C Q+ I+H DLK
Sbjct: 101 FDYLVAHGRXKEKEARAK------FRQIVSAVQYCH------------QKFIVHRDLKAE 142
Query: 283 NVLLDNDLTAYVGDFGLA 300
N+LLD D + DFG +
Sbjct: 143 NLLLDADXNIKIADFGFS 160
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
DY+H + +++ DLKPSN+ L + +GDFGL
Sbjct: 136 DYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 268 HDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
HD + +LH DLKP N+L++ + + DFGLA
Sbjct: 117 HDRR--VLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 268 HDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
HD + +LH DLKP N+L++ + + DFGLA
Sbjct: 117 HDRR--VLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 268 HDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
HD + +LH DLKP N+L++ + + DFGLA
Sbjct: 117 HDRR--VLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLA 171
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLA 171
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLA 175
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLA 175
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 165 VLHRDLKPSNLLLNTTXDLKICDFGLA 191
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 8/45 (17%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLL-----DNDLT---AYVGDFGLA 300
+YLH + PI+H DLK SN+L+ + DL+ + DFGLA
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 58 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 115
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 116 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXEL 175
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 176 KILDFGLA 183
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 47/131 (35%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD--- 264
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 265 -----------------------------------YLHHDCQEPILHCDLKPSNVLLDND 289
Y+H I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNED 161
Query: 290 LTAYVGDFGLA 300
+ DFGLA
Sbjct: 162 XELKILDFGLA 172
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 52 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 109
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 110 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXEL 169
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 170 KILDFGLA 177
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 52 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 109
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 110 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXEL 169
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 170 KILDFGLA 177
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 276 HCDLKPSNVLLDNDLTAYVGDFGLA 300
H D+KP N+L+ D AY+ DFG+A
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIA 181
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDND---LTAYVGDFGLAIF 302
YLH + I+H D+KP N+LL+N L + DFGL+ F
Sbjct: 161 YLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF 198
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
Y+H + ILH D+K +NVL+ D + DFGLA
Sbjct: 140 YIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLA 176
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLA 176
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLA 177
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLA 168
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLA 169
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
++H DLKPSN+L++++ V DFGLA
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLA 171
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLA 191
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLA 169
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
++H DLKPSN+L++++ V DFGLA
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
++H DLKPSN+L++++ V DFGLA
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLA 173
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLA 173
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 271 QEPILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
+E I++ DLKP N+LLD+ + D GLA+
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAV 334
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLA 179
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLA 171
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 271 QEPILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
+E I++ DLKP N+LLD+ + D GLA+
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAV 334
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
Y+H + ILH D+K +NVL+ D + DFGLA
Sbjct: 140 YIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
Y+H + ILH D+K +NVL+ D + DFGLA
Sbjct: 139 YIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
Y+H + ILH D+K +NVL+ D + DFGLA
Sbjct: 140 YIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 268 HDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
H + PI+H DLK N+LL N T + DFG A
Sbjct: 153 HRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLL 286
DYLH C+ I+H D+KP N+LL
Sbjct: 144 DYLHTKCR--IIHTDIKPENILL 164
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLL 286
DYLH C+ I+H D+KP N+LL
Sbjct: 160 DYLHTKCR--IIHTDIKPENILL 180
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 265 YLHH-----DCQEP-ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
YLH D +P I H DL NVL+ ND T + DFGL++ G
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTG 172
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 31.2 bits (69), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 31.2 bits (69), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 59 GLRVAVKKLSKPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 116
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 117 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 176
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 177 KILDFGLA 184
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 31.2 bits (69), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLA 153
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.2 bits (69), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+LL+ + DFGLA
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLA 173
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLA 152
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLA 150
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 59 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 116
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 117 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 176
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 177 KILDFGLA 184
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 59 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 116
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 117 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 176
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 177 KILDFGLA 184
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|2VWB|A Chain A, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis.
pdb|2VWB|B Chain B, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis
Length = 535
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSNCI 315
++H DL SN + D DL Y+ DFGL +SNL++ +
Sbjct: 447 VIHNDLTTSNFIFDKDL--YIIDFGLG----KISNLDEDKAV 482
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 53 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 110
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 111 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSEL 170
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 171 KILDFGLA 178
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 54 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 111
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 112 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 171
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 172 KILDFGLA 179
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFG 298
Y+H+ ++ I H D+KPSN+L+D + + DFG
Sbjct: 166 YIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG 197
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+SKG +++ + + HG KS++ ++LR N R + + +
Sbjct: 88 VSKGQPTLVVMEL-----MAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + + +H DL N ++ +D T +GDFG+
Sbjct: 140 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 176
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 70 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 127
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 128 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 187
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 188 KILDFGLA 195
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 54 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 111
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 112 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 171
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 172 KILDFGLA 179
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+SKG +++ + + HG KS++ ++LR N R + + +
Sbjct: 89 VSKGQPTLVVMEL-----MAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + + +H DL N ++ +D T +GDFG+
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 58 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 115
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 116 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 175
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 176 KILDFGLA 183
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 165 KILDFGLA 172
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 165 KILDFGLA 172
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 274 ILHCDLKPSNVLLDND---LTAYVGDFGLAIFCQG 305
I+H DLKP N+LL + + DFGLAI QG
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG 158
>pdb|3ENH|A Chain A, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3ENH|B Chain B, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3EN9|A Chain A, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
pdb|3EN9|B Chain B, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
Length = 540
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQSNCI 315
++H DL SN + D DL Y+ DFGL +SNL++ +
Sbjct: 452 VIHNDLTTSNFIFDKDL--YIIDFGLG----KISNLDEDKAV 487
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 49 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 106
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 107 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSEL 166
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 167 KILDFGLA 174
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKPSN+L++ + DFGLA
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLA 191
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+SKG +++ + + HG KS++ ++LR N R + + +
Sbjct: 86 VSKGQPTLVVMEL-----MAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + + +H DL N ++ +D T +GDFG+
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 174
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+SKG +++ + + HG KS++ ++LR N R + + +
Sbjct: 89 VSKGQPTLVVMEL-----MAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + + +H DL N ++ +D T +GDFG+
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 70 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 127
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 128 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 187
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 188 KILDFGLA 195
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 49 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 106
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 107 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 166
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 167 KILDFGLA 174
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 53 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 110
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 111 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 170
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 171 KILDFGLA 178
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 49 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 106
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 107 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 166
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 167 KILDFGLA 174
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 54 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 111
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 112 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 171
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 172 KILDFGLA 179
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 165 KILDFGLA 172
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 165 KILDFGLA 172
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 165 KILDFGLA 172
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 67 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 124
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 125 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 184
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 185 KILDFGLA 192
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 268 HDCQEPILHCDLKPSNVLLDNDL---TAYVGDFGLAIFCQG 305
H Q ++H DLKP N+LL + L + DFGLAI +G
Sbjct: 136 HCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEG 176
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 47/131 (35%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD--- 264
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 265 -----------------------------------YLHHDCQEPILHCDLKPSNVLLDND 289
Y+H I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNED 161
Query: 290 LTAYVGDFGLA 300
+ DFGLA
Sbjct: 162 CELKILDFGLA 172
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 54 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 111
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 112 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 171
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 172 KILDFGLA 179
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 66 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 123
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 124 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 183
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 184 KILDFGLA 191
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 49 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 106
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 107 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 166
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 167 KILDFGLA 174
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 52 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 109
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 110 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 169
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 170 KILDFGLA 177
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 46 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 103
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 104 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 163
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 164 KILDFGLA 171
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 165 KILDFGLA 172
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 30.8 bits (68), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.8 bits (68), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 30.8 bits (68), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 266 LHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
LH+ I+H D+K N+LLD + + DFG++
Sbjct: 152 LHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 165 KILDFGLA 172
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DYLH E +H D+K +NVLL + DFG+A
Sbjct: 134 DYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+SKG +++ + + HG KS++ ++LR N R + + +
Sbjct: 89 VSKGQPTLVVMEL-----MAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + + +H DL N ++ +D T +GDFG+
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYV 294
DYLH C+ I+H D+KP N+L+ D AYV
Sbjct: 154 DYLHSKCK--IIHTDIKPENILMCVD-DAYV 181
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+SKG +++ + + HG KS++ ++LR N R + + +
Sbjct: 89 VSKGQPTLVVMEL-----MAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + + +H DL N ++ +D T +GDFG+
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLA 192
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLA 191
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLA 178
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLA 192
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 156 IIHRDLKPSNLAVNEDCELKILDFGLA 182
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 266 LHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
LH+ I+H D+K N+LLD + + DFG++
Sbjct: 152 LHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 30.8 bits (68), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 274 ILHCDLKPSNVLLDND---LTAYVGDFGLAIFCQG 305
I+H DLKP N+LL + + DFGLAI QG
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG 158
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 30.8 bits (68), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 30.8 bits (68), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 293 YVGDFGLA 300
+ DFGLA
Sbjct: 165 KILDFGLA 172
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.8 bits (68), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I H D+KP N+LLD + DFGLA
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 30.8 bits (68), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLA 178
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLA 177
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLA 168
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 30.8 bits (68), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 72/204 (35%), Gaps = 46/204 (22%)
Query: 19 NLKILIQLDLSDNFLEG-NIQTSLGKCERFVQIELSNNHLSGTIPPELIGLS-SLLIALD 76
NLK L +LDLS N + + S GK I+ S+N + EL L L
Sbjct: 121 NLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFS 180
Query: 77 LSRNHFSGSLPTEVGNLKN------LGILNVSKNLLAGEIPRSLGSCVRLEQL------- 123
L+ N + + G N L IL+VS N +I + + + Q
Sbjct: 181 LAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAH 240
Query: 124 -------------DMQGNLFHGHIPSS------------------LSSLRGLVALDLSQN 152
D N F G SS +L+ L L+L+ N
Sbjct: 241 HIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYN 300
Query: 153 NLLGEIPEFLAGFRLLQILNLSYN 176
+ E G LQ+LNLSYN
Sbjct: 301 KINKIADEAFYGLDNLQVLNLSYN 324
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 16/139 (11%)
Query: 72 LIALDLSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFH 131
L L+L+ N + L NL +LN+S NLL + ++ +D+Q N
Sbjct: 292 LKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIA 351
Query: 132 GHIPSSLSSLRGLVALDLSQNNL-----LGEIPE-FLAGFRLLQ---------ILNLSYN 176
+ L L LDL N L + IP+ FL+G +L+ +++LS N
Sbjct: 352 IIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSEN 411
Query: 177 DLEGVVPIKGLCGVIPELQ 195
LE + + L V P LQ
Sbjct: 412 RLENLDILYFLLRV-PHLQ 429
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 30.8 bits (68), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 144 IIHRDLKPSNLAVNEDCELKILDFGLA 170
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLA 168
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 30.8 bits (68), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 229 HGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN 288
HG ++FI RN H V+ L + + + + +H DL N +LD
Sbjct: 115 HGDLRNFI------RNETHNPTVKDLIGFG-LQVAKGMKYLASKKFVHRDLAARNCMLDE 167
Query: 289 DLTAYVGDFGLA 300
T V DFGLA
Sbjct: 168 KFTVKVADFGLA 179
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLA 168
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTA-YVGDFGLAIFCQGVSNLN 310
DY H + I+H D+KP NV++D++L + D+GLA F N
Sbjct: 160 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 204
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLA 168
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLA 169
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 270 CQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
++ +H DL N +LD T V DFGLA
Sbjct: 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLA 171
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DFGLA
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLA 169
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H D+ NVLL N A +GDFGLA
Sbjct: 186 IHRDVAARNVLLTNGHVAKIGDFGLA 211
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 229 HGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN 288
HG ++FI RN H V+ L + + + + +H DL N +LD
Sbjct: 135 HGDLRNFI------RNETHNPTVKDLIGFG-LQVAKGMKYLASKKFVHRDLAARNCMLDE 187
Query: 289 DLTAYVGDFGLA 300
T V DFGLA
Sbjct: 188 KFTVKVADFGLA 199
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 229 HGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN 288
HG ++FI RN H V+ L + + + + +H DL N +LD
Sbjct: 108 HGDLRNFI------RNETHNPTVKDLIGFG-LQVAKGMKYLASKKFVHRDLAARNCMLDE 160
Query: 289 DLTAYVGDFGLA 300
T V DFGLA
Sbjct: 161 KFTVKVADFGLA 172
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H D+ NVLL N A +GDFGLA
Sbjct: 186 IHRDVAARNVLLTNGHVAKIGDFGLA 211
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 16 SIGNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSLLIAL 75
+ L L L+L DN+L + + ++ L NN + +IP L+ L
Sbjct: 118 AFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRL 176
Query: 76 DLSR----NHFSGSLPTEVGNLK--NLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNL 129
DL + S + NLK NLG+ N+ ++P +L V LE+L+M GN
Sbjct: 177 DLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK------DMP-NLTPLVGLEELEMSGNH 229
Query: 130 FHGHIPSS---LSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDLEGV 181
F P S LSSL+ L ++ SQ +L+ G L LNL++N+L +
Sbjct: 230 FPEIRPGSFHGLSSLKKLWVMN-SQVSLIER--NAFDGLASLVELNLAHNNLSSL 281
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTA-YVGDFGLAIFCQGVSNLN 310
DY H + I+H D+KP NV++D++L + D+GLA F N
Sbjct: 139 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 183
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTA-YVGDFGLAIFCQGVSNLN 310
DY H + I+H D+KP NV++D++L + D+GLA F N
Sbjct: 140 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 184
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 229 HGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN 288
HG ++FI RN H V+ L + + + + +H DL N +LD
Sbjct: 116 HGDLRNFI------RNETHNPTVKDLIGFG-LQVAKGMKYLASKKFVHRDLAARNCMLDE 168
Query: 289 DLTAYVGDFGLA 300
T V DFGLA
Sbjct: 169 KFTVKVADFGLA 180
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 229 HGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN 288
HG ++FI RN H V+ L + + + + +H DL N +LD
Sbjct: 134 HGDLRNFI------RNETHNPTVKDLIGFG-LQVAKGMKYLASKKFVHRDLAARNCMLDE 186
Query: 289 DLTAYVGDFGLA 300
T V DFGLA
Sbjct: 187 KFTVKVADFGLA 198
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTA-YVGDFGLAIFCQGVSNLN 310
DY H + I+H D+KP NV++D++L + D+GLA F N
Sbjct: 141 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 185
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H D+ NVLL N A +GDFGLA
Sbjct: 188 IHRDVAARNVLLTNGHVAKIGDFGLA 213
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTA-YVGDFGLAIFCQGVSNLN 310
DY H + I+H D+KP NV++D++L + D+GLA F N
Sbjct: 140 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 184
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVS 307
+YLH +++ DLKP N+L+D V DFG A +G +
Sbjct: 176 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT 216
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 261 DFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
+ D LH+ + ++H D+KP N+L+ + DFG ++
Sbjct: 123 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV 163
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 261 DFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
+ D LH+ + ++H D+KP N+L+ + DFG ++
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV 162
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 229 HGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN 288
HG ++FI RN H V+ L + + + + +H DL N +LD
Sbjct: 113 HGDLRNFI------RNETHNPTVKDLIGFG-LQVAKGMKYLASKKFVHRDLAARNCMLDE 165
Query: 289 DLTAYVGDFGLA 300
T V DFGLA
Sbjct: 166 KFTVKVADFGLA 177
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTA-YVGDFGLAIFCQGVSNLN 310
DY H + I+H D+KP NV++D++L + D+GLA F N
Sbjct: 139 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 183
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DYLH + + +H D+K +NVLL + DFG+A
Sbjct: 118 DYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 261 DFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
+ D LH+ + ++H D+KP N+L+ + DFG ++
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV 162
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTA-YVGDFGLAIFCQGVSNLN 310
DY H + I+H D+KP NV++D++L + D+GLA F N
Sbjct: 139 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 183
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 1 ILELQGKKLLGNIPLSIGN-LKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSG 59
IL+L K L+ I + N L L L+L DN L + + ++ L NN +
Sbjct: 63 ILQL-SKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE- 120
Query: 60 TIPPELIGLSSLLIALDLSR----NHFSGSLPTEVGNLK--NLGILNVSKNLLAGEIPRS 113
+IP L LDL + S + + NL+ NLG+ N+ +IP +
Sbjct: 121 SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLK------DIP-N 173
Query: 114 LGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNL 173
L + VRLE+L++ GN P S L L L L + + L+ LNL
Sbjct: 174 LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNL 233
Query: 174 SYNDL 178
S+N+L
Sbjct: 234 SHNNL 238
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H D+ NVLL N A +GDFGLA
Sbjct: 182 IHRDVAARNVLLTNGHVAKIGDFGLA 207
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H D+ NVLL N A +GDFGLA
Sbjct: 174 IHRDVAARNVLLTNGHVAKIGDFGLA 199
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTA-YVGDFGLAIFCQGVSNLN 310
DY H + I+H D+KP NV++D++L + D+GLA F N
Sbjct: 139 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 183
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTA-YVGDFGLAIFCQGVSNLN 310
DY H + I+H D+KP NV++D++L + D+GLA F N
Sbjct: 139 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 183
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H D+ NVLL N A +GDFGLA
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLA 205
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DYLH + + +H D+K +NVLL + DFG+A
Sbjct: 118 DYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTA-YVGDFGLAIFCQGVSNLN 310
DY H + I+H D+KP NV++D++L + D+GLA F N
Sbjct: 139 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 183
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 229 HGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN 288
HG ++FI RN H V+ L + + + + +H DL N +LD
Sbjct: 114 HGDLRNFI------RNETHNPTVKDLIGFG-LQVAKGMKYLASKKFVHRDLAARNCMLDE 166
Query: 289 DLTAYVGDFGLA 300
T V DFGLA
Sbjct: 167 KFTVKVADFGLA 178
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DYLH + + +H D+K +NVLL + DFG+A
Sbjct: 130 DYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Query: 50 IELSNNHLSGTIPPELIGLSSLLIALDLSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGE 109
+ L++N L +P S L +LD+ N S P L L +LN+ N L+
Sbjct: 30 LNLTHNQLR-RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQL 88
Query: 110 IPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNL 154
++ C L +L + N + + L+ LDLS N L
Sbjct: 89 SDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGL 133
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 135 PSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDL 178
PS LR L LDLS NN+ + L G L+IL+L +N+L
Sbjct: 473 PSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNL 516
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 194
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 229 HGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN 288
HG ++FI RN H V+ L + + + + +H DL N +LD
Sbjct: 116 HGDLRNFI------RNETHNPTVKDLIGFG-LQVAKGMKYLASKKFVHRDLAARNCMLDE 168
Query: 289 DLTAYVGDFGLA 300
T V DFGLA
Sbjct: 169 KFTVKVADFGLA 180
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 36/106 (33%), Gaps = 43/106 (40%)
Query: 233 KSFIAECKALRNVRHKNLVRVLTSCSS--------------------------------- 259
K+F E A R RH+N+V + +C S
Sbjct: 74 KAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR 133
Query: 260 ------IDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
+ YLH + ILH DLK NV DN + DFGL
Sbjct: 134 QIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNG-KVVITDFGL 175
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 229 HGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN 288
HG ++FI RN H V+ L + + + + +H DL N +LD
Sbjct: 115 HGDLRNFI------RNETHNPTVKDLIGFG-LQVAKGMKYLASKKFVHRDLAARNCMLDE 167
Query: 289 DLTAYVGDFGLA 300
T V DFGLA
Sbjct: 168 KFTVKVADFGLA 179
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I++ DLKP N+LLD + + DFGL+
Sbjct: 148 IIYRDLKPENILLDEEGHIKLTDFGLS 174
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I++ DLKP N+LLD + + DFGL+
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DYLH E +H D+K +NVLL + DFG+A
Sbjct: 133 DYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DYLH + + +H D+K +NVLL + DFG+A
Sbjct: 138 DYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 1 ILELQGKKLLGNIPLSIGN-LKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSG 59
IL+L K L+ I + N L L L+L DN L + + ++ L NN +
Sbjct: 63 ILQL-SKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE- 120
Query: 60 TIPPELIGLSSLLIALDLSR----NHFSGSLPTEVGNLK--NLGILNVSKNLLAGEIPRS 113
+IP L LDL + S + + NL+ NLG+ N+ +IP +
Sbjct: 121 SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLK------DIP-N 173
Query: 114 LGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNL 173
L + VRLE+L++ GN P S L L L L + + L+ LNL
Sbjct: 174 LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNL 233
Query: 174 SYNDL 178
S+N+L
Sbjct: 234 SHNNL 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Query: 50 IELSNNHLSGTIPPELIGLSSLLIALDLSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGE 109
+ L++N L +P S L +LD+ N S P L L +LN+ N L+
Sbjct: 35 LNLTHNQLR-RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQL 93
Query: 110 IPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNL 154
++ C L +L + N + + L+ LDLS N L
Sbjct: 94 SDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGL 138
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 135 PSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDL 178
PS LR L LDLS NN+ + L G L+IL+L +N+L
Sbjct: 478 PSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNL 521
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H D+KPSN+LLD + DFG++
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I++ DLKP N+LLD + + DFGL+
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 11/45 (24%)
Query: 272 EPILHC--------DLKPSNVLLDND---LTAYVGDFGLAIFCQG 305
E +LHC DLKP N+LL + + DFGLAI QG
Sbjct: 114 EAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 158
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Query: 50 IELSNNHLSGTIPPELIGLSSLLIALDLSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGE 109
+ L++N L +P S L +LD+ N S P L L +LN+ N L+
Sbjct: 40 LNLTHNQLR-RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQL 98
Query: 110 IPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNL 154
++ C L +L + N + + L+ LDLS N L
Sbjct: 99 SDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGL 143
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 135 PSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDL 178
PS LR L LDLS NN+ + L G L+IL+L +N+L
Sbjct: 483 PSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNL 526
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 229 HGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN 288
HG ++FI RN H V+ L + + + + +H DL N +LD
Sbjct: 111 HGDLRNFI------RNETHNPTVKDLIGFG-LQVAKGMKYLASKKFVHRDLAARNCMLDE 163
Query: 289 DLTAYVGDFGLA 300
T V DFGLA
Sbjct: 164 KFTVKVADFGLA 175
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+++D V DFGLA +G
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG 193
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D+LH ++H DLKP N+L+ + + DFGLA
Sbjct: 134 DFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+++D V DFGLA +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG 193
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D+LH ++H DLKP N+L+ + + DFGLA
Sbjct: 134 DFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
DYLH ++ +++ DLK N++LD D + DFGL
Sbjct: 265 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGL 298
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
DYLH ++ +++ DLK N++LD D + DFGL
Sbjct: 262 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGL 295
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 66/163 (40%), Gaps = 4/163 (2%)
Query: 16 SIGNLKILIQLDLSDNF-LEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSLLIA 74
+ L +L QLDLSDN L + R + L L P GL++L
Sbjct: 75 AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQY- 133
Query: 75 LDLSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDM-QGNLFHGH 133
L L N +L NL L + N ++ R+ L++L + Q + H H
Sbjct: 134 LYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVH 193
Query: 134 IPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYN 176
P + L L+ L L NNL E LA R LQ L L+ N
Sbjct: 194 -PHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 66/163 (40%), Gaps = 4/163 (2%)
Query: 16 SIGNLKILIQLDLSDNF-LEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSLLIA 74
+ L +L QLDLSDN L + R + L L P GL++L
Sbjct: 74 AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQY- 132
Query: 75 LDLSRNHFSGSLPTEVGNLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDM-QGNLFHGH 133
L L N +L NL L + N ++ R+ L++L + Q + H H
Sbjct: 133 LYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVH 192
Query: 134 IPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYN 176
P + L L+ L L NNL E LA R LQ L L+ N
Sbjct: 193 -PHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLD 287
DY+H C I+H D+KP NVL++
Sbjct: 145 DYMHRRCG--IIHTDIKPENVLME 166
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 36/154 (23%)
Query: 63 PELIGLSSLLIALDLSRNH------------FSG--SLPTEVGNLKNLGILNVSKNLLAG 108
PEL L L + D S H ++G SLP + NL+NL L + + L+
Sbjct: 161 PELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA 220
Query: 109 EIPRSLGSCVRLEQLDMQG--------NLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPE 160
P ++ +LE+LD++G +F G P L+ L+ D S NLL +P
Sbjct: 221 LGP-AIHHLPKLEELDLRGCTALRNYPPIFGGRAP-----LKRLILKDCS--NLL-TLP- 270
Query: 161 FLAGFRLLQILNLSYNDLEGVVPIKGLCGVIPEL 194
L RL Q+ L DL G V + L +I +L
Sbjct: 271 -LDIHRLTQLEKL---DLRGCVNLSRLPSLIAQL 300
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D+LH ++H DLKP N+L+ + + DFGLA
Sbjct: 134 DFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLD 287
DY+H C I+H D+KP NVL++
Sbjct: 145 DYMHRRCG--IIHTDIKPENVLME 166
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 271 QEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
++ +LH DLKP N+L++ + DFGLA
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGLA 147
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ + L+ + DFGLA
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLA 162
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ + L+ + DFGLA
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLA 157
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ + L+ + DFGLA
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLA 161
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
YLH ILH DL SN+LL ++ + DFGLA
Sbjct: 127 YLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ + L+ + DFGLA
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ + L+ + DFGLA
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLA 164
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
LH DL N +L +D+T V DFGL+
Sbjct: 168 FLHRDLAARNCMLRDDMTVCVADFGLS 194
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ + L+ + DFGLA
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ + L+ + DFGLA
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ + L+ + DFGLA
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLA 162
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ + L+ + DFGLA
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLA 158
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ + L+ + DFGLA
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 293 YVGDFGLA 300
+ D+GLA
Sbjct: 165 KILDYGLA 172
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ + L+ + DFGLA
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLA 165
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I++ DLKP N+LLD + + DFGL+
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLS 177
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ + L+ + DFGLA
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLA 151
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ + L+ + DFGLA
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLA 166
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 17/82 (20%)
Query: 232 SKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN--- 288
S+ +E A R +R +VL+ + Y+H + I+H DLKP N+LL++
Sbjct: 143 SRKRFSEVDAARIIR-----QVLSGIT------YMH---KNKIVHRDLKPENLLLESKSK 188
Query: 289 DLTAYVGDFGLAIFCQGVSNLN 310
D + DFGL+ + +
Sbjct: 189 DANIRIIDFGLSTHFEASKKMK 210
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N +LD T V DFGLA
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 17/82 (20%)
Query: 232 SKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN--- 288
S+ +E A R +R +VL+ + Y+H + I+H DLKP N+LL++
Sbjct: 142 SRKRFSEVDAARIIR-----QVLSGIT------YMH---KNKIVHRDLKPENLLLESKSK 187
Query: 289 DLTAYVGDFGLAIFCQGVSNLN 310
D + DFGL+ + +
Sbjct: 188 DANIRIIDFGLSTHFEASKKMK 209
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N +LD T V DFGLA
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N +LD T V DFGLA
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N +LD T V DFGLA
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N +LD T V DFGLA
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 17/82 (20%)
Query: 232 SKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN--- 288
S+ +E A R +R +VL+ + Y+H + I+H DLKP N+LL++
Sbjct: 119 SRKRFSEVDAARIIR-----QVLSGIT------YMH---KNKIVHRDLKPENLLLESKSK 164
Query: 289 DLTAYVGDFGLAIFCQGVSNLN 310
D + DFGL+ + +
Sbjct: 165 DANIRIIDFGLSTHFEASKKMK 186
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 156 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N +LD T V DFGLA
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLA 185
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N +LD T V DFGLA
Sbjct: 213 FVHRDLAARNCMLDEKFTVKVADFGLA 239
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 176 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 156 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 14/67 (20%)
Query: 242 LRNVRH-------KNLVRVLT-SCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAY 293
LR++ H K + V+ +C +++F Q I+H D+KP+N+++
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFSH------QNGIIHRDVKPANIMISATNAVK 156
Query: 294 VGDFGLA 300
V DFG+A
Sbjct: 157 VMDFGIA 163
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 14/67 (20%)
Query: 242 LRNVRH-------KNLVRVLT-SCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAY 293
LR++ H K + V+ +C +++F Q I+H D+KP+N+L+
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFSH------QNGIIHRDVKPANILISATNAVK 156
Query: 294 VGDFGLA 300
V DFG+A
Sbjct: 157 VVDFGIA 163
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 188
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 142 EYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG 180
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 14/67 (20%)
Query: 242 LRNVRH-------KNLVRVLT-SCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAY 293
LR++ H K + V+ +C +++F Q I+H D+KP+N+++
Sbjct: 120 LRDIVHTEGPMTPKRAIEVIADACQALNFSH------QNGIIHRDVKPANIMISATNAVK 173
Query: 294 VGDFGLA 300
V DFG+A
Sbjct: 174 VMDFGIA 180
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1AIN|A Chain A, Crystal Structure Of Human Annexin I At 2.5 Angstroms
Resolution
Length = 314
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 11/59 (18%)
Query: 209 ISKGLKVII---ISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQD 264
I K L I+ S +FF + +H A K RHK L+R++ S S ID D
Sbjct: 228 IEKCLTAIVKCATSKPAFFAEKLHQAMKGV--------GTRHKALIRIMVSRSEIDMND 278
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 186
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 186
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 17/82 (20%)
Query: 232 SKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN--- 288
S+ +E A R +R +VL+ + Y+H + I+H DLKP N+LL++
Sbjct: 125 SRKRFSEVDAARIIR-----QVLSGIT------YMHKN---KIVHRDLKPENLLLESKSK 170
Query: 289 DLTAYVGDFGLAIFCQGVSNLN 310
D + DFGL+ + +
Sbjct: 171 DANIRIIDFGLSTHFEASKKMK 192
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+L+D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
DYLH ++ +++ DLK N++LD D + DFGL
Sbjct: 122 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGL 155
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLA 158
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ N L + DFGLA
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLA 152
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLA 158
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
DYLH ++ +++ DLK N++LD D + DFGL
Sbjct: 123 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGL 156
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+L+D V DFG A +G
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 179
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+LH DLKP N+L++ + + DFGLA
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 14/67 (20%)
Query: 242 LRNVRH-------KNLVRVLT-SCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAY 293
LR++ H K + V+ +C +++F Q I+H D+KP+N+++
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFSH------QNGIIHRDVKPANIMISATNAVK 156
Query: 294 VGDFGLA 300
V DFG+A
Sbjct: 157 VMDFGIA 163
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 94 KNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHI-PSSLSSLRGLVALDLSQN 152
+NL IL + N LAG + LEQLD+ N + P++ L L L L +
Sbjct: 55 RNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRC 114
Query: 153 NLLGEIPEFLAGFRLLQILNLSYNDLEGV 181
L P G LQ L L N+L+ +
Sbjct: 115 GLQELGPGLFRGLAALQYLYLQDNNLQAL 143
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
++H D+KPSN+LLD + DFG++
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLA 151
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLA 161
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 274 ILHCDLKPSNVL---LDNDLTAYVGDFGLA 300
I+H DLKP N+L LD D + DFGL+
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLA 150
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
DYLH ++ +++ DLK N++LD D + DFGL
Sbjct: 124 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGL 157
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLA 154
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVG--DFGLAIFCQ 304
I+HCDLKP N+LL N + + DFG + CQ
Sbjct: 161 IIHCDLKPENILLCNPKRSAIKIVDFGSS--CQ 191
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL NVL+D++L V DFGL+
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLS 198
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLA 161
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLA 327
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLA 327
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 14/67 (20%)
Query: 242 LRNVRH-------KNLVRVLT-SCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAY 293
LR++ H K + V+ +C +++F Q I+H D+KP+N+++
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFSH------QNGIIHRDVKPANIMISATNAVK 156
Query: 294 VGDFGLA 300
V DFG+A
Sbjct: 157 VMDFGIA 163
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL NVL+D++L V DFGL+
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLS 198
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLA 161
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLA 327
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+++ DLKP+N+LLD + D GLA
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLA 161
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 274 ILHCDLKPSNVL---LDNDLTAYVGDFGLA 300
I+H DLKP N+L LD D + DFGL+
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVG--DFGLAIFCQ 304
I+HCDLKP N+LL N + + DFG + CQ
Sbjct: 180 IIHCDLKPENILLCNPKRSAIKIVDFGSS--CQ 210
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+++ DLKP+N+LLD + D GLA
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 14/67 (20%)
Query: 242 LRNVRH-------KNLVRVLT-SCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAY 293
LR++ H K + V+ +C +++F Q I+H D+KP+N+++
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFS------HQNGIIHRDVKPANIMISATNAVK 156
Query: 294 VGDFGLA 300
V DFG+A
Sbjct: 157 VMDFGIA 163
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+++ DLKP+N+LLD + D GLA
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|1HM6|A Chain A, X-Ray Structure Of Full-Length Annexin 1
pdb|1HM6|B Chain B, X-Ray Structure Of Full-Length Annexin 1
pdb|1MCX|A Chain A, Structure Of Full-Length Annexin A1 In The Presence Of
Calcium
Length = 346
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 8/42 (19%)
Query: 223 FFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQD 264
FF + +H A K RHK L+R++ S S ID D
Sbjct: 277 FFAEKLHQAMKGI--------GTRHKTLIRIMVSRSEIDMND 310
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+++ DLKP+N+LLD + D GLA
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 257 CSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
C ID +YLH + I+H D+KP N+LL T + G+A
Sbjct: 116 CQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVA 156
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLA 152
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 47/130 (36%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD--- 264
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 265 -----------------------------------YLHHDCQEPILHCDLKPSNVLLDND 289
Y+H I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNED 161
Query: 290 LTAYVGDFGL 299
+ DFGL
Sbjct: 162 SELKILDFGL 171
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 274 ILHCDLKPSNVL---LDNDLTAYVGDFGLA 300
I+H DLKP N+L LD D + DFGL+
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +NVL+ L + DFGLA
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLA 156
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGLA
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLA 410
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKP N+ ++ D + DFGLA
Sbjct: 149 IIHRDLKPGNLAVNEDCELKILDFGLA 175
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 80/208 (38%), Gaps = 41/208 (19%)
Query: 15 LSIGNLKILIQLDLSDNFLEGNIQTSLGK---------------CERFVQIELSNNHLSG 59
SI N+K+ QLD D G +L E F + + N +SG
Sbjct: 252 FSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSG 311
Query: 60 TIPPELIGLSSL--LIALDLSRNHFSGSLPTEVGNLKNLGILNVSKNLLA--GEIPRSLG 115
T ++ S + + LD S N + ++ G+L L L + N L +I
Sbjct: 312 TRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTT 371
Query: 116 SCVRLEQLDM-QGNLFHGHIPSSLSSLRGLVALDLSQN---------------------N 153
L+QLD+ Q ++ + S + L++L++S N N
Sbjct: 372 QMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSN 431
Query: 154 LLGEIPEFLAGFRLLQILNLSYNDLEGV 181
+ IP+ + LQ LN++ N L+ V
Sbjct: 432 KIKSIPKQVVKLEALQELNVASNQLKSV 459
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+++D V DFG A +G
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG 193
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTA-YVGDFGLAIFCQGVSNLN 310
DY H + I+H D+KP NV++D+ + D+GLA F N
Sbjct: 146 DYCH---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYN 190
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+++D V DFG A +G
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 274 ILHCDLKPSNVL---LDNDLTAYVGDFGLA 300
I+H DLKP N+L LD D + DFGL+
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+++D V DFG A +G
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+++D V DFG A +G
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +NVL+ L + DFGLA
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLA 157
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIF 302
+H DL N L+D DL V DFG+ +
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRY 153
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+++D V DFG A +G
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTA-YVGDFGLAIFCQGVSNLN 310
DY H + I+H D+KP NV++D+ + D+GLA F N
Sbjct: 151 DYCH---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYN 195
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+++D V DFG A +G
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+++ DLKP N+++D V DFG A +G
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 7/42 (16%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDN---DLTAYVGDFGL-AIF 302
YLH + I+H DLKP N+LL++ D + DFGL A+F
Sbjct: 151 YLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+S+G ++I + + G KS++ ++LR N V S S + +
Sbjct: 97 VSQGQPTLVIMEL-----MTRGDLKSYL---RSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + +H DL N ++ D T +GDFG+
Sbjct: 149 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 185
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+S+G ++I + + G KS++ ++LR N V S S + +
Sbjct: 82 VSQGQPTLVIMEL-----MTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + +H DL N ++ D T +GDFG+
Sbjct: 134 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 170
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 25/107 (23%)
Query: 26 LDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGTIPPELIGLSSLLIALDLSRNHFSG- 84
LDLS N NI ++ K + ++ L+ N L+ +P E+ LS+L + LDLS N +
Sbjct: 229 LDLS-NLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRV-LDLSHNRLTSL 285
Query: 85 ---------------------SLPTEVGNLKNLGILNVSKNLLAGEI 110
+LP E GNL NL L V N L +
Sbjct: 286 PAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQF 332
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 92 NLKNLGILNVSKNLLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQ 151
+L NL I N+S N+ + L +L + GN +P+ + +L L LDLS
Sbjct: 230 DLSNLQIFNISANIFKYDF---------LTRLYLNGNSL-TELPAEIKNLSNLRVLDLSH 279
Query: 152 NNLLGEIPEFLAGFRL 167
N L E + F+L
Sbjct: 280 NRLTSLPAELGSCFQL 295
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 271 QEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
Q +H DL+ +N+L+ L + DFGLA
Sbjct: 129 QRNYIHRDLRAANILVSASLVCKIADFGLA 158
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 268 HDCQEPILHCDLKPSNVLLDNDL---TAYVGDFGLAIFCQG 305
H Q ++H +LKP N+LL + L + DFGLAI +G
Sbjct: 125 HCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query: 265 YLHHDCQEPILHCDLKPSNVLL---DNDLTAYVGDFG 298
YLH + I+H DLKP NVLL + D + DFG
Sbjct: 128 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 161
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+S+G ++I + + G KS++ ++LR N V S S + +
Sbjct: 84 VSQGQPTLVIMEL-----MTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + +H DL N ++ D T +GDFG+
Sbjct: 136 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 172
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query: 265 YLHHDCQEPILHCDLKPSNVLL---DNDLTAYVGDFG 298
YLH + I+H DLKP NVLL + D + DFG
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 242 LRNVRHK-NLVRVLTSCSSI-DFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
LR +RH+ ++L C + + +YL + LH DL N L+++ V DFGL
Sbjct: 110 LREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 166
Query: 300 AIF 302
+ +
Sbjct: 167 SRY 169
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query: 265 YLHHDCQEPILHCDLKPSNVLL---DNDLTAYVGDFG 298
YLH + I+H DLKP NVLL + D + DFG
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query: 265 YLHHDCQEPILHCDLKPSNVLL---DNDLTAYVGDFG 298
YLH + I+H DLKP NVLL + D + DFG
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 162
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+S+G ++I + + G KS++ ++LR N V S S + +
Sbjct: 91 VSQGQPTLVIMEL-----MTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + +H DL N ++ D T +GDFG+
Sbjct: 143 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 179
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 271 QEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
Q +H DL+ +N+L+ L + DFGLA
Sbjct: 302 QRNYIHRDLRAANILVSASLVCKIADFGLA 331
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQG 305
+YLH +++ DLKP N+++D V DFG A +G
Sbjct: 155 EYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG 193
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+S+G ++I + + G KS++ ++LR N V S S + +
Sbjct: 87 VSQGQPTLVIMEL-----MTRGDLKSYL---RSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + +H DL N ++ D T +GDFG+
Sbjct: 139 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 175
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 266 LHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
L H Q+ I++ DLKP N++L++ + DFGL
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 266 LHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
L H Q+ I++ DLKP N++L++ + DFGL
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
++H DLKP N+ ++ D + DFGLA
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLA 191
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLAIFCQ 304
+H DL N+L++++L V DFGL+ F +
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLE 169
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query: 265 YLHHDCQEPILHCDLKPSNVLL---DNDLTAYVGDFG 298
YLH + I+H DLKP NVLL + D + DFG
Sbjct: 135 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 168
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLT-AYVGDFGLAIFCQ 304
+YLH ILH D+K NVLL +D + A + DFG A+ Q
Sbjct: 199 EYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQ 237
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLAIFCQ 304
+H DL N+L++++L V DFGL+ F +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLE 167
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 242 LRNVRHK-NLVRVLTSCSSI-DFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
LR +RH+ ++L C + + +YL + LH DL N L+++ V DFGL
Sbjct: 101 LREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 157
Query: 300 AIF 302
+ +
Sbjct: 158 SRY 160
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+S+G ++I + + G KS++ ++LR N V S S + +
Sbjct: 97 VSQGQPTLVIMEL-----MTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + +H DL N ++ D T +GDFG+
Sbjct: 149 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 185
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 242 LRNVRHK-NLVRVLTSCSSI-DFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
LR +RH+ ++L C + + +YL + LH DL N L+++ V DFGL
Sbjct: 110 LREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 166
Query: 300 AIF 302
+ +
Sbjct: 167 SRY 169
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLT-AYVGDFGLAIFCQ 304
+YLH ILH D+K NVLL +D + A + DFG A+ Q
Sbjct: 180 EYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQ 218
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
++H DLKP N+ ++ D + DFGLA
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLA 173
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 6/39 (15%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDN---DLTAYVGDFGLA 300
Y+H + I+H DLKP N+LL++ D + DFGL+
Sbjct: 136 YMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 271 QEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
Q +H DL+ +N+L+ L + DFGLA
Sbjct: 296 QRNYIHRDLRAANILVSASLVCKIADFGLA 325
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+S+G ++I + + G KS++ ++LR N V S S + +
Sbjct: 90 VSQGQPTLVIMEL-----MTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + +H DL N ++ D T +GDFG+
Sbjct: 142 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 178
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVG--DFGLAIFCQ 304
I+HCDLKP N+LL N + DFG + CQ
Sbjct: 180 IIHCDLKPENILLCNPKRXAIKIVDFGSS--CQ 210
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 266 LHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
L H + ++H D+KP+N+ L +GDFGL +
Sbjct: 170 LAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLV 205
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 242 LRNVRHK-NLVRVLTSCSSI-DFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
LR +RH+ ++L C + + +YL + LH DL N L+++ V DFGL
Sbjct: 95 LREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 151
Query: 300 AIF 302
+ +
Sbjct: 152 SRY 154
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N +L D+T V DFGL+
Sbjct: 158 FIHRDLAARNCMLAEDMTVCVADFGLS 184
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+S+G ++I + + G KS++ ++LR N V S S + +
Sbjct: 91 VSQGQPTLVIMEL-----MTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + +H DL N ++ D T +GDFG+
Sbjct: 143 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 179
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 242 LRNVRHK-NLVRVLTSCSSI-DFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
LR +RH+ ++L C + + +YL + LH DL N L+++ V DFGL
Sbjct: 94 LREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 150
Query: 300 AIF 302
+ +
Sbjct: 151 SRY 153
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 242 LRNVRHK-NLVRVLTSCSSI-DFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
LR +RH+ ++L C + + +YL + LH DL N L+++ V DFGL
Sbjct: 95 LREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 151
Query: 300 AIF 302
+ +
Sbjct: 152 SRY 154
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+S+G ++I + + G KS++ ++LR N V S S + +
Sbjct: 88 VSQGQPTLVIMEL-----MTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + +H DL N ++ D T +GDFG+
Sbjct: 140 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 176
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLT 179
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
++H D+KP N+LL ++ + DFG ++
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSV 160
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+S+G ++I + + G KS++ ++LR N V S S + +
Sbjct: 90 VSQGQPTLVIMEL-----MTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + +H DL N ++ D T +GDFG+
Sbjct: 142 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 178
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLT 179
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DYL Q+ +H DL N+L+ + A + DFGL+
Sbjct: 156 DYL---SQKQFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLT-AYVGDFGLAIFCQ 304
+YLH ILH D+K NVLL +D + A + DFG A+ Q
Sbjct: 178 EYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 216
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 222 SFFFKIVH--GASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDL 279
S+ F I+ G+ I E A R R K ++++ S +D +Y+H + +H D+
Sbjct: 125 SYRFMIMDRFGSDLQKIYEANAKRFSR-KTVLQL--SLRILDILEYIH---EHEYVHGDI 178
Query: 280 KPSNVLLD--NDLTAYVGDFGLAI-FC-QGV 306
K SN+LL+ N Y+ D+GLA +C +GV
Sbjct: 179 KASNLLLNYKNPDQVYLVDYGLAYRYCPEGV 209
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLT-AYVGDFGLAIFCQ 304
+YLH ILH D+K NVLL +D + A + DFG A+ Q
Sbjct: 164 EYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 209 ISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRVLTSCSSI-----DFQ 263
+S+G ++I + + G KS++ ++LR N V S S + +
Sbjct: 119 VSQGQPTLVIMEL-----MTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
D + + +H DL N ++ D T +GDFG+
Sbjct: 171 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 207
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLT-AYVGDFGLAIFCQ 304
+YLH ILH D+K NVLL +D + A + DFG A+ Q
Sbjct: 180 EYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 218
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
++H D+KP N+LL ++ + DFG ++
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSV 160
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 242 LRNVRHK-NLVRVLTSCSSI-DFQDYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGL 299
LR +RH+ ++L C + + +YL + LH DL N L+++ V DFGL
Sbjct: 90 LREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 146
Query: 300 AIF 302
+ +
Sbjct: 147 SRY 149
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 134 IHRDLATRNILVENENRVKIGDFGLT 159
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLT 192
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 135 IHRDLATRNILVENENRVKIGDFGLT 160
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 68 LSSLLIALDLSRNHFSGSLPTEVGNLKNLGILNVSKNLL-AGEIPRSLGSCVRLEQLDMQ 126
L +L++ + +N F +L T+ N+ +L L+VS N L + R+ + L++
Sbjct: 379 LQTLILQRNGLKNFFKVALMTK--NMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436
Query: 127 GNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAGFRLLQILNLSYNDLEGV 181
N+ G + L + LDL NN + IP+ + + LQ LN++ N L+ V
Sbjct: 437 SNMLTGSVFRCLPP--KVKVLDL-HNNRIMSIPKDVTHLQALQELNVASNQLKSV 488
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 222 SFFFKIVH--GASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDL 279
S+ F I+ G+ I E A R R K ++++ S +D +Y+H + +H D+
Sbjct: 125 SYRFMIMDRFGSDLQKIYEANAKRFSR-KTVLQL--SLRILDILEYIH---EHEYVHGDI 178
Query: 280 KPSNVLLD--NDLTAYVGDFGLAI-FC-QGV 306
K SN+LL+ N Y+ D+GLA +C +GV
Sbjct: 179 KASNLLLNYKNPDQVYLVDYGLAYRYCPEGV 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
DYL Q+ +H DL N+L+ + A + DFGL+
Sbjct: 146 DYL---SQKQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 141 IHRDLATRNILVENENRVKIGDFGLT 166
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLT 164
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLT 168
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 274 ILHCDLKPSNVLLDNDLTA--YVGDFGLAIF 302
I+HCDLKP N+LL + V DFG + +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 274 ILHCDLKPSNVLLDNDLTA--YVGDFGLAIF 302
I+HCDLKP N+LL + V DFG + +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 140 IHRDLATRNILVENENRVKIGDFGLT 165
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 142 IHRDLATRNILVENENRVKIGDFGLT 167
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGL 299
I++ DLKP N+LLD+ + DFGL
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGL 185
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++N+ +GDFGL
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLT 164
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 6/39 (15%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDN---DLTAYVGDFGLA 300
Y+H + I+H DLKP N+LL++ D + DFGL+
Sbjct: 136 YMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 266 LHHDCQEPILHCDLKPSNVLLDNDLTAYVG--DFGLA 300
+ H Q ILH DLKP N+L N + DFGLA
Sbjct: 200 IRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLA 236
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 274 ILHCDLKPSNVLLDNDLTA--YVGDFGLAIF 302
I+HCDLKP N+LL + V DFG + +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 222 SFFFKIVH--GASKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDL 279
S+ F I+ G+ I E A R R K ++++ S +D +Y+H + +H D+
Sbjct: 125 SYRFMIMDRFGSDLQKIYEANAKRFSR-KTVLQL--SLRILDILEYIH---EHEYVHGDI 178
Query: 280 KPSNVLLD--NDLTAYVGDFGLAI-FC-QGV 306
K SN+LL+ N Y+ D+GLA +C +GV
Sbjct: 179 KASNLLLNYKNPDQVYLVDYGLAYRYCPEGV 209
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 264 DYLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLA 300
+YLH + +H D+K N+LL+ + A + DFG+A
Sbjct: 139 EYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 266 LHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIF 302
L H ++H D+KP+NV + +GD GL F
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRF 185
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 6/39 (15%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDN---DLTAYVGDFGLA 300
Y+H + I+H DLKP N+LL++ D + DFGL+
Sbjct: 136 YMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 6/39 (15%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDN---DLTAYVGDFGLA 300
YLH + I+H DLKP N+LL++ D + DFGL+
Sbjct: 119 YLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query: 265 YLHHDCQEPILHCDLKPSNVLL---DNDLTAYVGDFG 298
YLH + I+H DLKP NVLL + D + DFG
Sbjct: 254 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 287
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 6/39 (15%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDN---DLTAYVGDFGLA 300
YLH + I+H DLKP N+LL++ D + DFGL+
Sbjct: 136 YLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIF-CQGVSNLNQSN 313
I H D K NVL+ ++L + D GLA+ QG L+ N
Sbjct: 134 IAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGN 174
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query: 265 YLHHDCQEPILHCDLKPSNVLL---DNDLTAYVGDFG 298
YLH + I+H DLKP NVLL + D + DFG
Sbjct: 268 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 301
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 105 LLAGEIPRSLGSCVRLEQLDMQGNLFHGHIPSSLSSLRGLVALDLSQNNLLGEIPEFLAG 164
+L IPR + +L + GN F +P LS+ + L +DLS N + + +
Sbjct: 24 VLPKGIPRDV------TELYLDGNQF-TLVPKELSNYKHLTLIDLSNNRISTLSNQSFSN 76
Query: 165 FRLLQILNLSYNDLEGVVP 183
L L LSYN L + P
Sbjct: 77 MTQLLTLILSYNRLRCIPP 95
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLAIFCQ 304
+H DL N+L++++L V DFGL+ F +
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLE 186
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL +N+L+ +L V DFGLA
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLA 161
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQ 304
I+H D+K N+++ D T + DFG A + +
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLE 181
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL N+L++++L V DFGLA
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLA 194
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 13/109 (11%)
Query: 194 LQQPKCTKNNSSNQKISKGLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKNLVRV 253
LQ P + S + KG K I++ T G K+++ K + ++V
Sbjct: 82 LQHPNIVRFYDSWESTVKGKKCIVLVTEL----XTSGTLKTYLKRFKVXK-------IKV 130
Query: 254 LTS-CSSIDFQDYLHHDCQEPILHCDLKPSNVLLDNDL-TAYVGDFGLA 300
L S C I H PI+H DLK N+ + + +GD GLA
Sbjct: 131 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 1 ILELQGKKLLGNIPLSIGNLKILIQLDLSDNFLEGNIQTSLGKCERFVQIELSNNHLSGT 60
IL+LQ L L N L+++DLS N LE + K +R ++ +SNN L
Sbjct: 230 ILKLQHNNLTDTAWL--LNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL--- 284
Query: 61 IPPELIGLS-SLLIALDLSRNH 81
+ L G L LDLS NH
Sbjct: 285 VALNLYGQPIPTLKVLDLSHNH 306
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 266 LHHDCQEPILHCDLKPSNVLLDNDLTAYVG--DFGLA 300
L H + I+H D+KP N++ + + V DFGLA
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 17/72 (23%)
Query: 232 SKSFIAECKALRNVRHKNLVRVLTSCSSIDFQDYLHHDCQEPILHCDLKPSNVLLDN--- 288
S+ +E A R +R +VL+ + Y H + I+H DLKP N+LL++
Sbjct: 119 SRKRFSEVDAARIIR-----QVLSGIT------YXH---KNKIVHRDLKPENLLLESKSK 164
Query: 289 DLTAYVGDFGLA 300
D + DFGL+
Sbjct: 165 DANIRIIDFGLS 176
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 27.7 bits (60), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLA 300
I+H DLKPSN+ ++ D + DF LA
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFYLA 172
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 27.7 bits (60), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H +L+ +N+L+ + L+ + DFGLA
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLA 152
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 293 YVGDFGLA 300
+ FGLA
Sbjct: 165 KILGFGLA 172
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 268 HDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSN 308
H+C +H D+KP N+L+ + DFG A G S+
Sbjct: 121 HNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 293 YVGDFGLA 300
+ D GLA
Sbjct: 165 KILDAGLA 172
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
I H DLK N+L+ + T + D GLA+
Sbjct: 135 IAHRDLKSKNILVKKNGTCCIADLGLAV 162
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 13/74 (17%)
Query: 230 GASKSFIAECKALRNVRHKNLVRVLTSCSSIDF---QDYLHHDCQEPILHCDLKPSNVLL 286
G+ K ++ + K N++ + L + C +D+ + Y+H D L NVL+
Sbjct: 110 GSLKEYLPKNKNKINLKQQ-LKYAVQICKGMDYLGSRQYVHRD---------LAARNVLV 159
Query: 287 DNDLTAYVGDFGLA 300
+++ +GDFGL
Sbjct: 160 ESEHQVKIGDFGLT 173
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Query: 265 YLHHDCQEPILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSN 308
YLH+ + ++H D+K ++LL +D + DFG FC VS
Sbjct: 156 YLHN---QGVIHRDIKSDSILLTSDGRIKLSDFG---FCAQVSK 193
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 13/74 (17%)
Query: 230 GASKSFIAECKALRNVRHKNLVRVLTSCSSIDF---QDYLHHDCQEPILHCDLKPSNVLL 286
G+ K ++ + K N++ + L + C +D+ + Y+H D L NVL+
Sbjct: 98 GSLKEYLPKNKNKINLKQQ-LKYAVQICKGMDYLGSRQYVHRD---------LAARNVLV 147
Query: 287 DNDLTAYVGDFGLA 300
+++ +GDFGL
Sbjct: 148 ESEHQVKIGDFGLT 161
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 27.7 bits (60), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 265 YLHHDCQEPILHCDLKPSNVLL---DNDLTAYVGDFGLAIFCQGVSNLNQSNC 314
YLH + I+H DLKP N+L D + + DFGL+ +G ++ + C
Sbjct: 135 YLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM-EGKGDVMSTAC 183
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
I H DLK N+L+ + T + D GLA+
Sbjct: 129 IAHRDLKSKNILVKKNGTCCIADLGLAV 156
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 275 LHCDLKPSNVLLDNDLTAYVGDFGLA 300
+H DL+ +N+L+ +L V DFGL
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLG 328
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAIFCQGVSNLNQ 311
I H DLK N+L+ + T + D GLA+ + +S+ N+
Sbjct: 163 IAHRDLKSKNILVKKNGTCCIADLGLAV--KFISDTNE 198
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
I H DLK N+L+ + T + D GLA+
Sbjct: 132 IAHRDLKSKNILVKKNGTCCIADLGLAV 159
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 41/128 (32%)
Query: 212 GLKVIIISTVSFFFKIVHGASKSFIAECKALRNVRHKN---LVRVLTSCSSID-FQD-YL 266
GL+V + F I+H +K E + L++++H+N L+ V T S++ F D YL
Sbjct: 47 GLRVAVKKLSRPFQSIIH--AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 267 -HH----------DCQE-----------------------PILHCDLKPSNVLLDNDLTA 292
H CQ+ I+H DLKPSN+ ++ D
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 293 YVGDFGLA 300
+ D GLA
Sbjct: 165 KILDRGLA 172
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 27.7 bits (60), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 274 ILHCDLKPSNVLLDNDLTAYVGDFGLAI 301
I H DLK N+L+ + T + D GLA+
Sbjct: 130 IAHRDLKSKNILVKKNGTCCIADLGLAV 157
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.140 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,889,917
Number of Sequences: 62578
Number of extensions: 350878
Number of successful extensions: 2245
Number of sequences better than 100.0: 722
Number of HSP's better than 100.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 190
Number of HSP's that attempted gapping in prelim test: 1371
Number of HSP's gapped (non-prelim): 931
length of query: 315
length of database: 14,973,337
effective HSP length: 99
effective length of query: 216
effective length of database: 8,778,115
effective search space: 1896072840
effective search space used: 1896072840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)