BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046151
(209 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3K3K|A Chain A, Crystal Structure Of Dimeric Abscisic Acid (Aba) Receptor
Pyrabactin Resistance 1 (Pyr1) With Aba-Bound Closed-Lid
And Aba-Free Open-Lid Subunits
pdb|3K3K|B Chain B, Crystal Structure Of Dimeric Abscisic Acid (Aba) Receptor
Pyrabactin Resistance 1 (Pyr1) With Aba-Bound Closed-Lid
And Aba-Free Open-Lid Subunits
Length = 211
Score = 273 bits (699), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 131/177 (74%), Positives = 150/177 (84%)
Query: 30 IPSGVTQDEFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKH 89
+PS +T +E ELK S+ EFHTYQL CSSL AQRI AP ++VWSIVRRFD+PQTYKH
Sbjct: 21 MPSELTPEERSELKNSIAEFHTYQLDPGSCSSLHAQRIHAPPELVWSIVRRFDKPQTYKH 80
Query: 90 FIKSCSVSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNY 149
FIKSCSV NF M VG TRDV VISGLPA TSTERLDILDD+R+VTGFSIIGGEHRL NY
Sbjct: 81 FIKSCSVEQNFEMRVGCTRDVIVISGLPANTSTERLDILDDERRVTGFSIIGGEHRLTNY 140
Query: 150 RSVTSVHGFNRDGAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAES 206
+SVT+VH F ++ I TVVLESYVVD+PEGN+E+DTR+FADTVVKLNLQKL +VAE+
Sbjct: 141 KSVTTVHRFEKENRIWTVVLESYVVDMPEGNSEDDTRMFADTVVKLNLQKLATVAEA 197
>pdb|3K90|A Chain A, The Abscisic Acid Receptor Pyr1 In Complex With Abscisic
Acid
pdb|3K90|B Chain B, The Abscisic Acid Receptor Pyr1 In Complex With Abscisic
Acid
pdb|3K90|C Chain C, The Abscisic Acid Receptor Pyr1 In Complex With Abscisic
Acid
pdb|3K90|D Chain D, The Abscisic Acid Receptor Pyr1 In Complex With Abscisic
Acid
pdb|3QN1|A Chain A, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
Length = 193
Score = 272 bits (695), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 150/178 (84%)
Query: 29 AIPSGVTQDEFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYK 88
A+ S +T +E ELK S+ EFHTYQL CSSL AQRI AP ++VWSIVRRFD+PQTYK
Sbjct: 2 AMASELTPEERSELKNSIAEFHTYQLDPGSCSSLHAQRIHAPPELVWSIVRRFDKPQTYK 61
Query: 89 HFIKSCSVSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRN 148
HFIKSCSV NF M VG TRDV VISGLPA TSTERLDILDD+R+VTGFSIIGGEHRL N
Sbjct: 62 HFIKSCSVEQNFEMRVGCTRDVIVISGLPANTSTERLDILDDERRVTGFSIIGGEHRLTN 121
Query: 149 YRSVTSVHGFNRDGAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAES 206
Y+SVT+VH F ++ I TVVLESYVVD+PEGN+E+DTR+FADTVVKLNLQKL +VAE+
Sbjct: 122 YKSVTTVHRFEKENRIWTVVLESYVVDMPEGNSEDDTRMFADTVVKLNLQKLATVAEA 179
>pdb|3NJO|A Chain A, X-Ray Crystal Structure Of The Pyr1-Pyrabactin A Complex
pdb|3NJO|B Chain B, X-Ray Crystal Structure Of The Pyr1-Pyrabactin A Complex
pdb|3NJO|C Chain C, X-Ray Crystal Structure Of The Pyr1-Pyrabactin A Complex
Length = 194
Score = 270 bits (691), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 130/177 (73%), Positives = 149/177 (84%)
Query: 30 IPSGVTQDEFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKH 89
+PS +T +E ELK S+ EFHTYQL CSSL AQRI AP ++VWSIVRRFD+PQTYKH
Sbjct: 4 MPSELTPEERSELKNSIAEFHTYQLDPGSCSSLHAQRIHAPPELVWSIVRRFDKPQTYKH 63
Query: 90 FIKSCSVSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNY 149
FIKSCSV NF M VG TRDV VISGL A TSTERLDILDD+R+VTGFSIIGGEHRL NY
Sbjct: 64 FIKSCSVEQNFEMRVGCTRDVIVISGLSANTSTERLDILDDERRVTGFSIIGGEHRLTNY 123
Query: 150 RSVTSVHGFNRDGAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAES 206
+SVT+VH F ++ I TVVLESYVVD+PEGN+E+DTR+FADTVVKLNLQKL +VAE+
Sbjct: 124 KSVTTVHRFEKENRIWTVVLESYVVDMPEGNSEDDTRMFADTVVKLNLQKLATVAEA 180
>pdb|3ZVU|A Chain A, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 193
Score = 268 bits (685), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/178 (73%), Positives = 149/178 (83%)
Query: 29 AIPSGVTQDEFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYK 88
A+ S +T +E ELK S+ EFHTYQL CSSL AQRI AP ++VWSIVRRFD+PQTYK
Sbjct: 2 AMASELTPEERSELKNSIAEFHTYQLDPGSCSSLHAQRIHAPPELVWSIVRRFDKPQTYK 61
Query: 89 HFIKSCSVSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRN 148
FIKSCSV NF M VG TRDV VISGLPA TSTERLDILDD+R+VTGFSIIGGEHRL N
Sbjct: 62 PFIKSCSVEQNFEMRVGCTRDVIVISGLPANTSTERLDILDDERRVTGFSIIGGEHRLTN 121
Query: 149 YRSVTSVHGFNRDGAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAES 206
Y+SVT+VH F ++ I TVVLESYVVD+PEGN+E+DTR+FADTVVKLNLQKL +VAE+
Sbjct: 122 YKSVTTVHRFEKENRIWTVVLESYVVDMPEGNSEDDTRMFADTVVKLNLQKLATVAEA 179
>pdb|3JRS|A Chain A, Crystal Structure Of (+)-Aba-Bound Pyl1
pdb|3JRS|B Chain B, Crystal Structure Of (+)-Aba-Bound Pyl1
pdb|3JRS|C Chain C, Crystal Structure Of (+)-Aba-Bound Pyl1
Length = 208
Score = 259 bits (661), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 134/186 (72%), Positives = 156/186 (83%), Gaps = 3/186 (1%)
Query: 24 TTHHLAIPSGVTQDEFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQ 83
T HH +PS +TQDEF +L QS+ EFHTYQL +CSSLLAQRI AP + VWS+VRRFD+
Sbjct: 19 TLHHQTMPSDLTQDEFTQLSQSIAEFHTYQLGNGRCSSLLAQRIHAPPETVWSVVRRFDR 78
Query: 84 PQTYKHFIKSCSVSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGE 143
PQ YKHFIKSC+VS++F M VG TRDVNVISGLPA TS ERLD+LDDDR+VTGFSI GGE
Sbjct: 79 PQIYKHFIKSCNVSEDFEMRVGCTRDVNVISGLPANTSRERLDLLDDDRRVTGFSITGGE 138
Query: 144 HRLRNYRSVTSVHGFNRDGA---ICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKL 200
HRLRNY+SVT+VH F ++ I TVVLESYVVDVPEGN+EEDTRLFADTV++LNLQKL
Sbjct: 139 HRLRNYKSVTTVHRFEKEEEEERIWTVVLESYVVDVPEGNSEEDTRLFADTVIRLNLQKL 198
Query: 201 VSVAES 206
S+ E+
Sbjct: 199 ASITEA 204
>pdb|3KDJ|A Chain A, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
pdb|3NEF|A Chain A, High-Resolution Pyrabactin-Bound Pyl1 Structure
pdb|3NEF|B Chain B, High-Resolution Pyrabactin-Bound Pyl1 Structure
pdb|3NEG|A Chain A, Pyrabactin-Bound Pyl1 Structure In The Open And Close
Forms
pdb|3NEG|B Chain B, Pyrabactin-Bound Pyl1 Structure In The Open And Close
Forms
Length = 202
Score = 258 bits (660), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/186 (72%), Positives = 156/186 (83%), Gaps = 3/186 (1%)
Query: 24 TTHHLAIPSGVTQDEFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQ 83
T HH +PS +TQDEF +L QS+ EFHTYQL +CSSLLAQRI AP + VWS+VRRFD+
Sbjct: 3 TLHHQTMPSDLTQDEFTQLSQSIAEFHTYQLGNGRCSSLLAQRIHAPPETVWSVVRRFDR 62
Query: 84 PQTYKHFIKSCSVSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGE 143
PQ YKHFIKSC+VS++F M VG TRDVNVISGLPA TS ERLD+LDDDR+VTGFSI GGE
Sbjct: 63 PQIYKHFIKSCNVSEDFEMRVGCTRDVNVISGLPANTSRERLDLLDDDRRVTGFSITGGE 122
Query: 144 HRLRNYRSVTSVHGFNRDGA---ICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKL 200
HRLRNY+SVT+VH F ++ I TVVLESYVVDVPEGN+EEDTRLFADTV++LNLQKL
Sbjct: 123 HRLRNYKSVTTVHRFEKEEEEERIWTVVLESYVVDVPEGNSEEDTRLFADTVIRLNLQKL 182
Query: 201 VSVAES 206
S+ E+
Sbjct: 183 ASITEA 188
>pdb|3JRQ|B Chain B, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 186
Score = 252 bits (643), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 153/180 (85%), Gaps = 3/180 (1%)
Query: 30 IPSGVTQDEFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKH 89
+PS +TQDEF +L QS+ EFHTYQL +CSSLLAQRI AP + VWS+VRRFD+PQ YKH
Sbjct: 4 MPSDLTQDEFTQLSQSIAEFHTYQLGNGRCSSLLAQRIHAPPETVWSVVRRFDRPQIYKH 63
Query: 90 FIKSCSVSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNY 149
FIKSC+VS++F M VG TRDVNVISGLPA TS ERLD+LDDDR+VTGFSI GGEHRLRNY
Sbjct: 64 FIKSCNVSEDFEMRVGCTRDVNVISGLPANTSRERLDLLDDDRRVTGFSITGGEHRLRNY 123
Query: 150 RSVTSVHGFNRDGA---ICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAES 206
+SVT+VH F ++ I TVVLESYVVDVPEGN+EEDTRLFADTV++LNLQKL S+ E+
Sbjct: 124 KSVTTVHRFEKEEEEERIWTVVLESYVVDVPEGNSEEDTRLFADTVIRLNLQKLASITEA 183
>pdb|3KAY|A Chain A, Crystal Structure Of Abscisic Acid Receptor Pyl1
pdb|3KAY|B Chain B, Crystal Structure Of Abscisic Acid Receptor Pyl1
pdb|3NMN|A Chain A, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|C Chain C, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 178
Score = 241 bits (615), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 146/172 (84%), Gaps = 3/172 (1%)
Query: 38 EFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIKSCSVS 97
EF +L QS+ EFHTYQL +CSSLLAQRI AP + VWS+VRRFD+PQ YKHFIKSC+VS
Sbjct: 3 EFTQLSQSIAEFHTYQLGNGRCSSLLAQRIHAPPETVWSVVRRFDRPQIYKHFIKSCNVS 62
Query: 98 DNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNYRSVTSVHG 157
++F M VG TRDVNVISGLPA TS ERLD+LDDDR+VTGFSI GGEHRLRNY+SVT+VH
Sbjct: 63 EDFEMRVGCTRDVNVISGLPANTSRERLDLLDDDRRVTGFSITGGEHRLRNYKSVTTVHR 122
Query: 158 FNRDGA---ICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAES 206
F ++ I TVVLESYVVDVPEGN+EEDTRLFADTV++LNLQKL S+ E+
Sbjct: 123 FEKEEEEERIWTVVLESYVVDVPEGNSEEDTRLFADTVIRLNLQKLASITEA 174
>pdb|3NJ1|A Chain A, X-Ray Crystal Structure Of The Pyl2(V114i)-Pyrabactin A
Complex
Length = 193
Score = 201 bits (512), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 128/176 (72%), Gaps = 3/176 (1%)
Query: 33 GVTQDEFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIK 92
G+T +E L+ + +H ++ C+SL+ QRI AP VVW ++RRFD P+ YKHF+K
Sbjct: 12 GLTDEEQKTLEPVIKTYHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVK 71
Query: 93 SCSVSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNYRSV 152
C + VGS R+V VISGLPA+TSTERL+ +DDD +V F I+GGEHRL+NY+SV
Sbjct: 72 RCRLISG-DGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRIVGGEHRLKNYKSV 130
Query: 153 TSVHGF-NRD-GAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAES 206
TSV+ F N+D G + TVVLESY VD+PEGNTEEDT++F DTVVKLNLQKL A S
Sbjct: 131 TSVNEFLNQDSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATS 186
>pdb|3KDH|A Chain A, Structure Of Ligand-Free Pyl2
pdb|3KDH|B Chain B, Structure Of Ligand-Free Pyl2
pdb|3KDH|C Chain C, Structure Of Ligand-Free Pyl2
pdb|3KDI|A Chain A, Structure Of (+)-Aba Bound Pyl2
pdb|3NR4|A Chain A, Pyrabactin-Bound Pyl2
pdb|3NR4|B Chain B, Pyrabactin-Bound Pyl2
pdb|3NR4|C Chain C, Pyrabactin-Bound Pyl2
pdb|3NS2|A Chain A, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3NS2|B Chain B, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3NS2|C Chain C, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3KL1|A Chain A, Crystal Structure Of Abscisic Acid Receptor Pyl2 At 1.55 A
pdb|3KL1|B Chain B, Crystal Structure Of Abscisic Acid Receptor Pyl2 At 1.55 A
Length = 190
Score = 201 bits (510), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 128/176 (72%), Gaps = 3/176 (1%)
Query: 33 GVTQDEFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIK 92
G+T +E L+ + +H ++ C+SL+ QRI AP VVW ++RRFD P+ YKHF+K
Sbjct: 9 GLTDEEQKTLEPVIKTYHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVK 68
Query: 93 SCSVSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNYRSV 152
C + VGS R+V VISGLPA+TSTERL+ +DDD +V F ++GGEHRL+NY+SV
Sbjct: 69 RCRLISG-DGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSV 127
Query: 153 TSVHGF-NRD-GAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAES 206
TSV+ F N+D G + TVVLESY VD+PEGNTEEDT++F DTVVKLNLQKL A S
Sbjct: 128 TSVNEFLNQDSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATS 183
>pdb|3NJ0|A Chain A, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
pdb|3NJ0|B Chain B, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
pdb|3NJ0|C Chain C, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
Length = 193
Score = 201 bits (510), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 128/176 (72%), Gaps = 3/176 (1%)
Query: 33 GVTQDEFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIK 92
G+T +E L+ + +H ++ C+SL+ QRI AP VVW ++RRFD P+ YKHF+K
Sbjct: 12 GLTDEEQKTLEPVIKTYHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVK 71
Query: 93 SCSVSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNYRSV 152
C + VGS R+V VISGLPA+TSTERL+ +DDD +V F ++GGEHRL+NY+SV
Sbjct: 72 RCRLISG-DGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSV 130
Query: 153 TSVHGF-NRD-GAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAES 206
TSV+ F N+D G + TVVLESY VD+PEGNTEEDT++F DTVVKLNLQKL A S
Sbjct: 131 TSVNEFLNQDSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATS 186
>pdb|3KAZ|A Chain A, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KAZ|B Chain B, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KAZ|C Chain C, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KB0|A Chain A, Crystal Structure Of Abscisic Acid-Bound Pyl2
pdb|3KB3|A Chain A, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 176
Score = 196 bits (498), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 123/167 (73%), Gaps = 3/167 (1%)
Query: 42 LKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIKSCSVSDNFT 101
L+ + +H ++ C+SL+ QRI AP VVW ++RRFD P+ YKHF+K C +
Sbjct: 6 LEPVIKTYHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISG-D 64
Query: 102 MAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNYRSVTSVHGF-NR 160
VGS R+V VISGLPA+TSTERL+ +DDD +V F ++GGEHRL+NY+SVTSV+ F N+
Sbjct: 65 GDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQ 124
Query: 161 D-GAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAES 206
D G + TVVLESY VD+PEGNTEEDT++F DTVVKLNLQKL A S
Sbjct: 125 DSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATS 171
>pdb|3UJL|A Chain A, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 177
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 123/167 (73%), Gaps = 3/167 (1%)
Query: 42 LKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIKSCSVSDNFT 101
L+ + +H ++ C+SL+ QRI AP VVW ++RRFD P+ YKHF+K C +
Sbjct: 7 LEPVIKTYHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISG-D 65
Query: 102 MAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNYRSVTSVHGF-NR 160
VGS R+V VISGLPA+TSTERL+ +DDD +V F ++GGEHRL+NY+SVTSV+ F N+
Sbjct: 66 GDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQ 125
Query: 161 D-GAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAES 206
D G + TVVLESY VD+PEGNTEEDT++F DTVVKLNLQKL A S
Sbjct: 126 DSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATS 172
>pdb|3NMH|A Chain A, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
pdb|3NMH|B Chain B, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
pdb|3NMH|C Chain C, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
Length = 178
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 123/167 (73%), Gaps = 3/167 (1%)
Query: 42 LKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIKSCSVSDNFT 101
L+ + +H ++ C+SL+ QRI AP VVW ++RRFD P+ YKHF+K C +
Sbjct: 7 LEPVIKTYHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISG-D 65
Query: 102 MAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNYRSVTSVHGF-NR 160
VGS R+V VISGLPA+TSTERL+ +DDD +V F ++GGEHRL+NY+SVTSV+ F N+
Sbjct: 66 GDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQ 125
Query: 161 D-GAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAES 206
D G + TVVLESY VD+PEGNTEEDT++F DTVVKLNLQKL A S
Sbjct: 126 DSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATS 172
>pdb|3NMP|A Chain A, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMP|B Chain B, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMP|C Chain C, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMT|A Chain A, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
pdb|3NMV|A Chain A, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
Length = 178
Score = 193 bits (490), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 122/167 (73%), Gaps = 3/167 (1%)
Query: 42 LKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIKSCSVSDNFT 101
L+ + +H ++ C+SL+ QRI AP VVW ++RRFD P+ YKHF+K C +
Sbjct: 7 LEPVIKTYHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISG-D 65
Query: 102 MAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNYRSVTSVHGF-NR 160
VGS R+V VISGLP +TSTERL+ +DDD +V F ++GGEHRL+NY+SVTSV+ F N+
Sbjct: 66 GDVGSVREVTVISGLPFSTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQ 125
Query: 161 D-GAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAES 206
D G + TVVLESY VD+PEGNTEEDT++F DTVVKLNLQKL A S
Sbjct: 126 DSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATS 172
>pdb|3OJI|A Chain A, X-Ray Crystal Structure Of The Py13 -Pyrabactin Complex
pdb|3OJI|B Chain B, X-Ray Crystal Structure Of The Py13 -Pyrabactin Complex
Length = 189
Score = 192 bits (487), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 127/183 (69%), Gaps = 9/183 (4%)
Query: 31 PSGVTQDEFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHF 90
P G+T+DEF L + HT+ S N C+SL+A R+ AP +W VR F P YKHF
Sbjct: 2 PYGLTKDEFSTLDSIIRTHHTFPRSPNTCTSLIAHRVDAPAHAIWRFVRDFANPNKYKHF 61
Query: 91 IKSCSVSDNFT----MAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRL 146
IKSC++ N + VG+ R+V+V+SGLPA+TS E L++LD+++++ F ++GGEHRL
Sbjct: 62 IKSCTIRVNGNGIKEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRL 121
Query: 147 RNYRSVTSVHGF-----NRDGAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLV 201
NYRSVTSV+ F ++ + +VVLESY+VD+P+GNTEEDTR+F DTVVK NLQ L
Sbjct: 122 NNYRSVTSVNEFVVLEKDKKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKSNLQNLA 181
Query: 202 SVA 204
++
Sbjct: 182 VIS 184
>pdb|3KLX|A Chain A, Crystal Structure Of Native Abscisic Acid Receptor Pyl3
pdb|3KLX|B Chain B, Crystal Structure Of Native Abscisic Acid Receptor Pyl3
pdb|4DS8|A Chain A, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 209
Score = 192 bits (487), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 127/183 (69%), Gaps = 9/183 (4%)
Query: 31 PSGVTQDEFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHF 90
P G+T+DEF L + HT+ S N C+SL+A R+ AP +W VR F P YKHF
Sbjct: 22 PYGLTKDEFSTLDSIIRTHHTFPRSPNTCTSLIAHRVDAPAHAIWRFVRDFANPNKYKHF 81
Query: 91 IKSCSVSDNFT----MAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRL 146
IKSC++ N + VG+ R+V+V+SGLPA+TS E L++LD+++++ F ++GGEHRL
Sbjct: 82 IKSCTIRVNGNGIKEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRL 141
Query: 147 RNYRSVTSVHGF-----NRDGAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLV 201
NYRSVTSV+ F ++ + +VVLESY+VD+P+GNTEEDTR+F DTVVK NLQ L
Sbjct: 142 NNYRSVTSVNEFVVLEKDKKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKSNLQNLA 201
Query: 202 SVA 204
++
Sbjct: 202 VIS 204
>pdb|4DSB|A Chain A, Complex Structure Of Abscisic Acid Receptor Pyl3 With
(+)-Aba In Spacegroup Of I 212121 At 2.70a
pdb|4DSB|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3 With
(+)-Aba In Spacegroup Of I 212121 At 2.70a
Length = 186
Score = 189 bits (480), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 126/181 (69%), Gaps = 9/181 (4%)
Query: 33 GVTQDEFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIK 92
G+T+DEF L + HT+ S N C+SL+A R+ AP +W VR F P YKHFIK
Sbjct: 1 GLTKDEFSTLDSIIRTHHTFPRSPNTCTSLIAHRVDAPAHAIWRFVRDFANPNKYKHFIK 60
Query: 93 SCSVSDNFT----MAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRN 148
SC++ N + VG+ R+V+V+SGLPA+TS E L++LD+++++ F ++GGEHRL N
Sbjct: 61 SCTIRVNGNGIKEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRLNN 120
Query: 149 YRSVTSVHGF-----NRDGAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSV 203
YRSVTSV+ F ++ + +VVLESY+VD+P+GNTEEDTR+F DTVVK NLQ L +
Sbjct: 121 YRSVTSVNEFVVLEKDKKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKSNLQNLAVI 180
Query: 204 A 204
+
Sbjct: 181 S 181
>pdb|4DSC|A Chain A, Complex Structure Of Abscisic Acid Receptor Pyl3 With
(+)-Aba In Spacegroup Of H32 At 1.95a
pdb|4DSC|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3 With
(+)-Aba In Spacegroup Of H32 At 1.95a
Length = 188
Score = 187 bits (474), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 125/180 (69%), Gaps = 9/180 (5%)
Query: 34 VTQDEFDELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIKS 93
+T+DEF L + HT+ S N C+SL+A R+ AP +W VR F P YKHFIKS
Sbjct: 4 LTKDEFSTLDSIIRTHHTFPRSPNTCTSLIAHRVDAPAHAIWRFVRDFANPNKYKHFIKS 63
Query: 94 CSVSDNFT----MAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNY 149
C++ N + VG+ R+V+V+SGLPA+TS E L++LD+++++ F ++GGEHRL NY
Sbjct: 64 CTIRVNGNGIKEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRLNNY 123
Query: 150 RSVTSVHGF-----NRDGAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVA 204
RSVTSV+ F ++ + +VVLESY+VD+P+GNTEEDTR+F DTVVK NLQ L ++
Sbjct: 124 RSVTSVNEFVVLEKDKKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKSNLQNLAVIS 183
>pdb|3QRZ|A Chain A, Crystal Structure Of Native Abscisic Acid Receptor Pyl5 At
2.6 Angstrom
pdb|3QRZ|B Chain B, Crystal Structure Of Native Abscisic Acid Receptor Pyl5 At
2.6 Angstrom
pdb|3QRZ|C Chain C, Crystal Structure Of Native Abscisic Acid Receptor Pyl5 At
2.6 Angstrom
Length = 223
Score = 177 bits (449), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 115/160 (71%), Gaps = 3/160 (1%)
Query: 41 ELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIKSCSVSDNF 100
+ + V HT+ + +QC S + Q I AP + VW++VRRFD P+ YK+FI+ C +
Sbjct: 60 HVPEHVAMHHTHDVGPDQCCSSVVQMIHAPPESVWALVRRFDNPKVYKNFIRQCRIVQGD 119
Query: 101 TMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNYRSVTSVHGFNR 160
+ VG R+V V+SGLPA +STERL+ILD++R V FS++GG+HRL+NYRSVT++H +
Sbjct: 120 GLHVGDLREVMVVSGLPAVSSTERLEILDEERHVISFSVVGGDHRLKNYRSVTTLHASDD 179
Query: 161 DGAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKL 200
+G TVV+ESY+VDVP GNTEE+T F DT+V+ NLQ L
Sbjct: 180 EG---TVVVESYIVDVPPGNTEEETLSFVDTIVRCNLQSL 216
>pdb|3OQU|A Chain A, Crystal Structure Of Native Abscisic Acid Receptor Pyl9
With Aba
pdb|3OQU|B Chain B, Crystal Structure Of Native Abscisic Acid Receptor Pyl9
With Aba
Length = 205
Score = 169 bits (428), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 115/165 (69%), Gaps = 2/165 (1%)
Query: 41 ELKQSVVEFHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIKSCSVSDNF 100
E Q V H + +NQC+S L + I+AP +VWS+VRRFDQPQ YK F+ C+V +
Sbjct: 34 ETVQYVRTHHQHLCRENQCTSALVKHIKAPLHLVWSLVRRFDQPQKYKPFVSRCTVIGD- 92
Query: 101 TMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNYRSVTSVHGFNR 160
+GS R+VNV SGLPA TSTERL++LDD+ + G IIGG+HRL+NY S+ +VH
Sbjct: 93 -PEIGSLREVNVKSGLPATTSTERLELLDDEEHILGIKIIGGDHRLKNYSSILTVHPEII 151
Query: 161 DGAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAE 205
+G T+V+ES+VVDVP+GNT+++T F + +++ NL+ L V+E
Sbjct: 152 EGRAGTMVIESFVVDVPQGNTKDETCYFVEALIRCNLKSLADVSE 196
>pdb|3UQH|A Chain A, Crystal Strcuture Of Aba Receptor Pyl10 (Apo)
pdb|3UQH|B Chain B, Crystal Strcuture Of Aba Receptor Pyl10 (Apo)
pdb|3R6P|A Chain A, Crystal Structure Of Abscisic Acid-Bound Pyl10
Length = 191
Score = 169 bits (428), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 113/170 (66%), Gaps = 5/170 (2%)
Query: 40 DELKQSVVEF----HTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIKSCS 95
DE K+ E+ H ++L ++QCSS L + I+AP +VWSIVRRFD+PQ YK FI C
Sbjct: 4 DETKKVESEYIKKHHRHELVESQCSSTLVKHIKAPLHLVWSIVRRFDEPQKYKPFISRCV 63
Query: 96 VSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNYRSVTSV 155
V + VGS R+V++ SGLPA STE L+ILDD+ + G I+GG+HRL+NY S S+
Sbjct: 64 VQGK-KLEVGSVREVDLKSGLPATKSTEVLEILDDNEHILGIRIVGGDHRLKNYSSTISL 122
Query: 156 HGFNRDGAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAE 205
H DG T+ +ES+VVDVPEGNT+E+T F + +++ NL L V E
Sbjct: 123 HSETIDGKTGTLAIESFVVDVPEGNTKEETCFFVEALIQCNLNSLADVTE 172
>pdb|3RT2|A Chain A, Crystal Structure Of Apo-Pyl10
Length = 183
Score = 169 bits (428), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 113/170 (66%), Gaps = 5/170 (2%)
Query: 40 DELKQSVVEF----HTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIKSCS 95
DE K+ E+ H ++L ++QCSS L + I+AP +VWSIVRRFD+PQ YK FI C
Sbjct: 4 DETKKVESEYIKKHHRHELVESQCSSTLVKHIKAPLHLVWSIVRRFDEPQKYKPFISRCV 63
Query: 96 VSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNYRSVTSV 155
V + VGS R+V++ SGLPA STE L+ILDD+ + G I+GG+HRL+NY S S+
Sbjct: 64 VQGK-KLEVGSVREVDLKSGLPATKSTEVLEILDDNEHILGIRIVGGDHRLKNYSSTISL 122
Query: 156 HGFNRDGAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAE 205
H DG T+ +ES+VVDVPEGNT+E+T F + +++ NL L V E
Sbjct: 123 HSETIDGKTGTLAIESFVVDVPEGNTKEETCFFVEALIQCNLNSLADVTE 172
>pdb|3RT0|C Chain C, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|D Chain D, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 183
Score = 169 bits (427), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 113/170 (66%), Gaps = 5/170 (2%)
Query: 40 DELKQSVVEF----HTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFDQPQTYKHFIKSCS 95
DE K+ E+ H ++L ++QCSS L + I+AP +VWSIVRRFD+PQ YK FI C
Sbjct: 4 DETKKVESEYIKKHHRHELVESQCSSTLVKHIKAPLHLVWSIVRRFDEPQKYKPFISRCV 63
Query: 96 VSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNYRSVTSV 155
V + VGS R+V++ SGLPA STE L+ILDD+ + G I+GG+HRL+NY S S+
Sbjct: 64 VQGK-KLEVGSVREVDLKSGLPATKSTEVLEILDDNEHILGIRIVGGDHRLKNYSSTISL 122
Query: 156 HGFNRDGAICTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLVSVAE 205
H DG T+ +ES+VVDVPEGNT+E+T F + +++ NL L V E
Sbjct: 123 HSETIDGKTGTLAIESFVVDVPEGNTKEETCFFVEALIQSNLNSLADVTE 172
>pdb|2G40|A Chain A, Crystal Structure Of A Duf162 Family Protein (Dr_1909)
From Deinococcus Radiodurans At 1.70 A Resolution
Length = 224
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 79 RRFDQPQTYKHFIKSCSVSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDD 131
R D Y H + + + A+G+ R V V +G+PA T +D+L D+
Sbjct: 63 RILDYGAAYTH-VSAAELPGAIAKALGNARRVIVPAGIPAPWLTVGMDVLRDE 114
>pdb|2I9Y|A Chain A, Solution Structure Of Arabidopsis Thaliana Protein
At1g70830, A Member Of The Major Latex Protein Family
Length = 166
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 91 IKSCSVSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFSIIGGEHRLRNYR 150
I+ C + + VGS N + A + ER++ ++ D+ + F +I G+ ++ Y+
Sbjct: 51 IQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNLITFRVIEGD-LMKEYK 109
Query: 151 S 151
S
Sbjct: 110 S 110
>pdb|3VA6|A Chain A, Crystal Structure Of The Extracellular Domain Of The
Putative Hybrid Two Component System Bt4673 From B.
Thetaiotaomicron
pdb|3VA6|B Chain B, Crystal Structure Of The Extracellular Domain Of The
Putative Hybrid Two Component System Bt4673 From B.
Thetaiotaomicron
Length = 758
Score = 28.9 bits (63), Expect = 1.9, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 49 FHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFD 82
+TYQL + +S +R PN+ ++SI+R D
Sbjct: 123 LYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKD 156
>pdb|3OTT|A Chain A, Crystal Structure Of The Extracellular Domain Of The
Putative One Component System Bt4673 From B.
Thetaiotaomicron
pdb|3OTT|B Chain B, Crystal Structure Of The Extracellular Domain Of The
Putative One Component System Bt4673 From B.
Thetaiotaomicron
Length = 758
Score = 28.9 bits (63), Expect = 1.9, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 49 FHTYQLSQNQCSSLLAQRIRAPNDVVWSIVRRFD 82
+TYQL + +S +R PN+ ++SI+R D
Sbjct: 123 LYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKD 156
>pdb|3I2T|A Chain A, Crystal Structure Of The Unliganded Drosophila Epidermal
Growth Factor Receptor Ectodomain
Length = 551
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 123 ERLDILDDDRQVTGFSIIGGEH-RLRN---YRSVTSVHG 157
ERL++ +++TG+ I G H + RN +R++ ++HG
Sbjct: 363 ERLEVFSTVKEITGYLNIEGTHPQFRNLSYFRNLETIHG 401
>pdb|3LTF|A Chain A, Crystal Structure Of The Drosophila Epidermal Growth
Factor Receptor Ectodomain In Complex With Spitz
pdb|3LTF|C Chain C, Crystal Structure Of The Drosophila Epidermal Growth
Factor Receptor Ectodomain In Complex With Spitz
pdb|3LTG|A Chain A, Crystal Structure Of The Drosophila Epidermal Growth
Factor Receptor Ectodomain Complexed With A Low Affinity
Spitz Mutant
pdb|3LTG|C Chain C, Crystal Structure Of The Drosophila Epidermal Growth
Factor Receptor Ectodomain Complexed With A Low Affinity
Spitz Mutant
Length = 601
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 123 ERLDILDDDRQVTGFSIIGGEH-RLRN---YRSVTSVHG 157
ERL++ +++TG+ I G H + RN +R++ ++HG
Sbjct: 363 ERLEVFSTVKEITGYLNIEGTHPQFRNLSYFRNLETIHG 401
>pdb|3DO6|A Chain A, Crystal Structure Of Putative Formyltetrahydrofolate
Synthetase (Tm1766) From Thermotoga Maritima At 1.85 A
Resolution
pdb|3DO6|B Chain B, Crystal Structure Of Putative Formyltetrahydrofolate
Synthetase (Tm1766) From Thermotoga Maritima At 1.85 A
Resolution
Length = 543
Score = 27.3 bits (59), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 84 PQTYKHFIKSCSVSDNFTMAVGSTRDVNVISGLPAATSTERLDILDDDRQVTGFS 138
P+ Y + VS V + D+N+ GLP + D+ DD + G S
Sbjct: 490 PEGYTFVVSDLFVSAGAGFVVALSGDINLXPGLPKKPNALNXDV-DDSGNIVGVS 543
>pdb|1NHR|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 11/70 (15%)
Query: 90 FIKSCSVSDNFTMAVGSTRDVNVIS----------GLPAATSTERLDILDDDRQVTGFSI 139
FI CS + G +DVN + G+ ++TE I + QVT +
Sbjct: 36 FISFCSCGMQLYLE-GKVKDVNSVRYMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDL 94
Query: 140 IGGEHRLRNY 149
+ GE R+ NY
Sbjct: 95 VSGEERVENY 104
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.129 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,144,388
Number of Sequences: 62578
Number of extensions: 237374
Number of successful extensions: 647
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 586
Number of HSP's gapped (non-prelim): 36
length of query: 209
length of database: 14,973,337
effective HSP length: 94
effective length of query: 115
effective length of database: 9,091,005
effective search space: 1045465575
effective search space used: 1045465575
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)