Your job contains 1 sequence.
>046158
MSSVNEFLAQNMLSDRESVLQFKKGMEEASKFLPTGNQLIIDLESYGFSTEQKEDTSRVV
VKVEKEERENSPEGSRGRKNHQREDVDLDEERSNKQSALYTEESELSDMFDKVLLLHVDS
NGKPTMCTKGQGEDSLLQKGQSNGSGEKSRSRKQGKRKDTVDLRTLLILCAQAVSSNDYR
TANELLKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKSFLMSLAPRKSAADMLK
AYKVYLSACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGP
PRLRITGIELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLKIN
PDEVLAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRF
REAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQA
RTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCWVPAP
EL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046158
(542 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 1601 1.6e-164 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 1358 4.4e-141 2
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 1259 5.4e-130 2
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 1189 7.4e-121 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 1150 1.0e-116 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 570 2.9e-55 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 543 2.1e-52 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 519 7.4e-50 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 506 1.8e-48 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 462 2.9e-46 2
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 474 4.4e-45 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 448 2.5e-42 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 438 2.8e-41 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 437 3.6e-41 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 439 3.8e-41 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 407 5.5e-38 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 264 3.1e-37 2
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 373 5.7e-33 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 365 2.4e-31 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 298 1.2e-29 2
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 346 1.8e-29 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 323 1.2e-28 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 314 1.2e-27 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 304 3.9e-24 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 268 1.7e-20 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 174 3.5e-19 2
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 232 2.4e-16 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 156 2.1e-10 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 150 2.6e-07 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 143 2.2e-06 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 140 4.9e-06 1
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 114 6.9e-06 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 122 0.00028 1
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 1601 (568.6 bits), Expect = 1.6e-164, P = 1.6e-164
Identities = 327/558 (58%), Positives = 410/558 (73%)
Query: 2 SSVNEFLAQNMLSDRESVLQFKKGMEEASKFLPTGNQLIIDLESY-GFSTEQKED----- 55
S + L NM D E +QFKKG+EEASKFLP +QL ID++SY ++ KE+
Sbjct: 217 SGFGDDLVSNMFKDDELAMQFKKGVEEASKFLPKSSQLFIDVDSYIPMNSGSKENGSEVF 276
Query: 56 --TSXXXXXXXXXXXXNSPEGSR--GRKNHQR-EDVDLDEERSNKQSALYTEESELSDMF 110
T +P +R G+K+H R ED D EERSNKQSA+Y EESELS+MF
Sbjct: 277 VKTEKKDETEHHHHHSYAPPPNRLTGKKSHWRDEDEDFVEERSNKQSAVYVEESELSEMF 336
Query: 111 DKVLLLHVDSNGKPTMCTKGQG---EDSLLQKGQSNGS---GEKSRSRKQGK--RKDTVD 162
DK+L V GKP +C Q E + + QSNG+ G+KS S +K+T D
Sbjct: 337 DKIL---VCGPGKP-VCILNQNFPTESAKVVTAQSNGAKIRGKKSTSTSHSNDSKKETAD 392
Query: 163 LRTLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGT 222
LRTLL+LCAQAVS +D RTANE+L+QIR+HSS G+GS+RLAH+FAN LEAR+AG+GT
Sbjct: 393 LRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQI 452
Query: 223 KSFLMSLAPRKSAADMLKAYKVYLSACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRY 282
+ L S + SAADMLKAY+ Y+S CPFKK AI+F +M+ + A+T+HI+DFGI Y
Sbjct: 453 YTALSS--KKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISY 510
Query: 283 GFQWPMLIQFLSM-RTGGPPRLRITGIELPQPGFRPAERIEETGRRLLKYCQRFNVPFEY 341
GFQWP LI LS+ R GG P+LRITGIELPQ GFRPAE ++ETG RL +YCQR NVPFEY
Sbjct: 511 GFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEY 570
Query: 342 NCIASQNWETIQIEDLKINPDEVLAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDI 401
N IA Q WETIQ+EDLK+ E + VNSLFRF+NLLDETV VN PR++VLKLIRKI P++
Sbjct: 571 NAIA-QKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNV 629
Query: 402 FVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVI 461
F+ +I++G+YNAPFFVTRFREA+FH+S++FDM D+ + RED RLM+E+E YGRE +NV+
Sbjct: 630 FIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVV 689
Query: 462 ACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWM 521
ACEG ERVERPETYKQWQAR IRAGF+QLPL +ELM+ L K++ Y K+F +DQ+ NW+
Sbjct: 690 ACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGNWL 749
Query: 522 LQGWKGRIVFASSCWVPA 539
LQGWKGRIV+ASS WVP+
Sbjct: 750 LQGWKGRIVYASSLWVPS 767
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 1358 (483.1 bits), Expect = 4.4e-141, Sum P(2) = 4.4e-141
Identities = 269/473 (56%), Positives = 350/473 (73%)
Query: 75 SRGRKNH---QREDVDLDE-ERSNKQSALYTEESELSDMFDKVLLLHVDSNGKPTMCTKG 130
S+ RKNH + E+ DL+E R +KQ A+ E+ +L++MFDKVLLL D P + G
Sbjct: 235 SKTRKNHHEREEEEDDLEEARRRSKQFAVNEEDGKLTEMFDKVLLL--DGECDPQIIEDG 292
Query: 131 QGEDSLLQKGQSNGSGEKSRSRKQGKRKDTVDLRTLLILCAQAVSSNDYRTANELLKQIR 190
+ G S +K R++K+ + VD RTLL LCAQ+VS+ D TA++LL+QIR
Sbjct: 293 EN-------GSSKALVKKGRAKKKSR---AVDFRTLLTLCAQSVSAGDKITADDLLRQIR 342
Query: 191 QHSSLTGDGSQRLAHWFANGLEARMAGS-GTGTKSFLMSLAPRK-SAADMLKAYKVYLSA 248
+ S GD SQRLAH+FAN LEAR+ GS GT +S+ S++ +K +AA +LK+Y V+LSA
Sbjct: 343 KQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDSISSKKRTAAQILKSYSVFLSA 402
Query: 249 CPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGPPRLRITGI 308
PF L F+ KMI+ ++ AS LHIVDFGI YGFQWPM IQ LS G +LRITGI
Sbjct: 403 SPFMTLIYFFSNKMILDAAKDASVLHIVDFGILYGFQWPMFIQHLSKSNPGLRKLRITGI 462
Query: 309 ELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLKINPDEVLAVN 368
E+PQ G RP ERI++TGRRL +YC+RF VPFEYN IAS+NWETI++E+ KI P+EVLAVN
Sbjct: 463 EIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVN 522
Query: 369 SLFRFKNLLDETV-DVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHF 427
++ RFKNL D + +CPR+ LKLIR + P++F++S VNGS+NAPFF TRF+EA+FH+
Sbjct: 523 AVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHY 582
Query: 428 SSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGF 487
S+LFD+F T+ +E+PER+ FE E YGRE MNVIACEG++RVERPETYKQWQ R IRAGF
Sbjct: 583 SALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGF 642
Query: 488 KQLPLNQELMEKLMGKLKAW-YHKDFVIDQDNNWMLQGWKGRIVFASSCWVPA 539
KQ P+ EL++ K+K W YHKDFV+D+D+NW LQGWKGRI+F+SSCWVP+
Sbjct: 643 KQKPVEAELVQLFREKMKKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCWVPS 695
Score = 197 (74.4 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 60/153 (39%), Positives = 85/153 (55%)
Query: 5 NEFLAQNMLSDRESVLQFKKGMEEASKFLPTGNQLIIDLESYGFSTEQKEDTSXXXXXXX 64
NE L ++M SD ESVLQFK+G+EEASKFLP +Q I +LE E +
Sbjct: 177 NEILVRSMFSDAESVLQFKRGLEEASKFLPNTDQWIFNLEP-----EMERVVPVKVEEGW 231
Query: 65 XXXXXNSPEGSRGRKNH---QREDVDLDE-ERSNKQSALYTEESELSDMFDKVLLLHVDS 120
S+ RKNH + E+ DL+E R +KQ A+ E+ +L++MFDKVLLL D
Sbjct: 232 SAI-------SKTRKNHHEREEEEDDLEEARRRSKQFAVNEEDGKLTEMFDKVLLL--DG 282
Query: 121 NGKPTMCTKGQGEDS--LLQKGQSNGSGEKSRS 151
P + G+ S L++KG++ +KSR+
Sbjct: 283 ECDPQIIEDGENGSSKALVKKGRAK---KKSRA 312
Score = 43 (20.2 bits), Expect = 4.4e-141, Sum P(2) = 4.4e-141
Identities = 13/68 (19%), Positives = 26/68 (38%)
Query: 4 VNEFLAQNMLSDRESVLQFKKGMEEASKFLPTGNQLIIDLESYGFSTEQKEDTSXXXXXX 63
VN+ L + L++++S+ + + + L Q+I D ++ TS
Sbjct: 73 VNQLLMEESLAEKQSIFYDSLALRQTEEML---QQVISDSQTQSSIPNNSITTSSSSNSG 129
Query: 64 XXXXXXNS 71
NS
Sbjct: 130 DYSNSSNS 137
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 1259 (448.2 bits), Expect = 5.4e-130, Sum P(2) = 5.4e-130
Identities = 254/478 (53%), Positives = 337/478 (70%)
Query: 75 SRGRKNHQREDVDLDEERSNKQSALYTEESELSDMFDKVLLLHVDSNG--KPTMCTKGQG 132
S+ RKN R+++ ++EERS+K A++ E+ SD+ DK+L+ HV K +
Sbjct: 243 SKARKNSSRDEICVEEERSSKLPAVFGEDILRSDVVDKILV-HVPGGESMKEFNALRDVL 301
Query: 133 EDSLLQKGQSNGSGEKSRSRKQGK------------RKDTVDLRTLLILCAQAVSSNDYR 180
+ + +K S+ G K R+R +G+ +K+ VDLR+LLI CAQAV+++D R
Sbjct: 302 KKGVEKKKASDAQGGKRRARGRGRGRGRGGGGGQNGKKEVVDLRSLLIHCAQAVAADDRR 361
Query: 181 TANELLKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKSFLMSLAPRKSAADMLK 240
A +LLKQIR HS+ GDG+QRLAH FANGLEAR+AG+G+ ++S PR SAA +LK
Sbjct: 362 CAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYKGIVS-KPR-SAAAVLK 419
Query: 241 AYKVYLSACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGP 300
A++++L+ CPF+KL+ T K I + + +H++DFGI YGFQWP LI SM G
Sbjct: 420 AHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSMY--GS 477
Query: 301 PRLRITGIELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLKIN 360
P++RITGIE PQPGFRPA+R+EETG+RL Y + F VPFEY IA + W+ IQ+EDL I+
Sbjct: 478 PKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKK-WDAIQLEDLDID 536
Query: 361 PDEVLAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRF 420
DE+ VN L+R +NL DE+V V R++VL LI KI PD+FV IVNG+YNAPFFVTRF
Sbjct: 537 RDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRF 596
Query: 421 REAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQA 480
REA+FHFSS+FDM +T +PRED ER+ E EV+GREA+NVIACEG ERVERPETYKQW
Sbjct: 597 REALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHV 656
Query: 481 RTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCWVP 538
R +R+G Q+P + +M+ + K+ +YHKDFVIDQDN W+LQGWKGR V A S W P
Sbjct: 657 RAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWKP 714
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 138/340 (40%), Positives = 203/340 (59%)
Query: 9 AQNMLSDRESVLQFKKGMEEASKFLPTGNQLIIDLESYGFSTEQKEDTSXXXXXXXXXXX 68
++N + +SV F++ +EEA++F P N+LI++ ++ ++++S
Sbjct: 202 SKNNRENHQSVWLFRREIEEANRFNPEENELIVNFREENCVSKARKNSSRDEICVEEERS 261
Query: 69 XNSPEGSRGRKNHQREDVDLDEERSNKQSALYTEE-SELSDMFDKVLLLHVDSNGKPTMC 127
P G ++ R DV +D+ + +E + L D+ K + +
Sbjct: 262 SKLP-AVFG-EDILRSDV-VDKILVHVPGGESMKEFNALRDVLKKGV--------EKKKA 310
Query: 128 TKGQGEDSLLQKGQSNGSGEKSRSRKQGKRKDTVDLRTLLILCAQAVSSNDYRTANELLK 187
+ QG +G+ G G + GK K+ VDLR+LLI CAQAV+++D R A +LLK
Sbjct: 311 SDAQG-GKRRARGRGRGRGRGGGGGQNGK-KEVVDLRSLLIHCAQAVAADDRRCAGQLLK 368
Query: 188 QIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKSFLMSLAPRKSAADMLKAYKVYLS 247
QIR HS+ GDG+QRLAH FANGLEAR+AG+G+ ++S PR SAA +LKA++++L+
Sbjct: 369 QIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYKGIVS-KPR-SAAAVLKAHQLFLA 426
Query: 248 ACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGPPRLRITG 307
CPF+KL+ T K I + + +H++DFGI YGFQWP LI SM G P++RITG
Sbjct: 427 CCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSMY--GSPKVRITG 484
Query: 308 IELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNCIASQ 347
IE PQPGFRPA+R+EETG+RL Y + F VPFEY IA +
Sbjct: 485 IEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKK 524
Score = 37 (18.1 bits), Expect = 5.4e-130, Sum P(2) = 5.4e-130
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 71 SPEGSRG-RKNHQREDVDLDEERSNKQSALYTEESELSDMFDKVLLL 116
+PE S R+ + ED D + S+ ++ DM DKV +L
Sbjct: 55 APENSVFIREEEEEEDPADDFDFSDAVLGYISQMLNEEDMDDKVCML 101
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 1189 (423.6 bits), Expect = 7.4e-121, P = 7.4e-121
Identities = 239/476 (50%), Positives = 327/476 (68%)
Query: 70 NSPEGSRGRKNHQREDVDLDEERSNKQSALYTEE-SELSDMFDKVLLL---HVDSNGKPT 125
+S E R ++ E+ DL+ R NKQ A++ E EL+ + VLL+ + + + T
Sbjct: 134 SSGESQRKYRHRNDEEDDLENNRRNKQPAIFVSEMEELAVKLEHVLLVCKTNQEEEEERT 193
Query: 126 MCTKGQGEDSLLQKGQSNGSGEKSRSRKQGKRKDTVDLRTLLILCAQAVSSNDYRTANEL 185
+ TK Q + + G++ GS KS++ K +TVDLR+LL CAQAV+S D R A +
Sbjct: 194 VITK-QSTPN--RAGRAKGSSNKSKTHKT----NTVDLRSLLTQCAQAVASFDQRRATDK 246
Query: 186 LKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKSFLMSLAPRKSAADMLKAYKVY 245
LK+IR HSS GDG+QRLA +FA LEAR+ G+ + S + S D+LKAYK++
Sbjct: 247 LKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPPVSNPFP-SSTTSMVDILKAYKLF 305
Query: 246 LSACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGPPRLRI 305
+ CP K I +++ KA+ LHIVDFG+ YGFQWP L++ LS R GGPP LR+
Sbjct: 306 VHTCPIYVTDYFAANKSIYELAMKATKLHIVDFGVLYGFQWPCLLRALSKRPGGPPMLRV 365
Query: 306 TGIELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLKINPDEVL 365
TGIELPQ GFRP++R+EETGRRL ++C +FNVPFE+N IA + WETI +++L INP E
Sbjct: 366 TGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFNFIAKK-WETITLDELMINPGETT 424
Query: 366 AVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIF 425
VN + R + DETV ++ PR++VLKL R I PD+FV + +NG YN+PFF+TRFREA+F
Sbjct: 425 VVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALF 484
Query: 426 HFSSLFDMFDTTMPREDP--ERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTI 483
H+SSLFDMFDTT+ ED R + ERE+ R+AM+VI+CEG ER RPETYKQW+ R +
Sbjct: 485 HYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRIL 544
Query: 484 RAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCWVPA 539
RAGFK +++++M++ ++ YH+DFVID DNNWMLQGWKGR+++A SCW PA
Sbjct: 545 RAGFKPATISKQIMKEAKEIVRKRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWKPA 600
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 1150 (409.9 bits), Expect = 1.0e-116, P = 1.0e-116
Identities = 240/472 (50%), Positives = 320/472 (67%)
Query: 71 SPEGSRGRKNHQREDVDLDEERSNKQSAL--YTEESELSDMFDKVLLLHVDSNGKPTMCT 128
S E +R R H+ +D D D+ S ++S L + EL++ F++VLL+ C
Sbjct: 129 SEESTR-RYRHRDDDED-DDLESGRKSKLPAISTVDELAEKFEEVLLV----------CQ 176
Query: 129 KG-QGEDSLLQKGQSNGSGEKSRSRKQGKRKDTVDLRTLLILCAQAVSSNDYRTANELLK 187
K QGE + +K + G +R ++Q K VD+R LL+ CAQAV+S D R A E LK
Sbjct: 177 KNDQGEAT--EKKTRHVKGSSNRYKQQ-KSDQPVDMRNLLMQCAQAVASFDQRRAFEKLK 233
Query: 188 QIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKSFLMSLAPRKSAADMLKAYKVYLS 247
+IR+HSS GD +QRL + FA LEAR+ G+ T S S R S D+LKAYK ++
Sbjct: 234 EIREHSSRHGDATQRLGYHFAEALEARITGTMTTPISATSS---RTSMVDILKAYKGFVQ 290
Query: 248 ACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGPPRLRITG 307
ACP + + I +++ KA+TLHI+DFGI YGFQWP LIQ LS R GPP LR+TG
Sbjct: 291 ACPTLIMCYFTANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTG 350
Query: 308 IELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLKINPDEVLAV 367
IELPQ GFRP+ER+EETGRRL ++C +FNVPFEY+ IA +NWE I ++DL IN E V
Sbjct: 351 IELPQSGFRPSERVEETGRRLKRFCDKFNVPFEYSFIA-KNWENITLDDLVINSGETTVV 409
Query: 368 NSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHF 427
N + R + DETV +N PR++ LKL R I PD+FV + +NG+YN+PFF+TRFREA+FH
Sbjct: 410 NCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHC 469
Query: 428 SSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGF 487
SSLFDM++TT+ +D R + ERE+ R+AM+VIACEG ER RPETYKQWQ R +RAGF
Sbjct: 470 SSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGF 529
Query: 488 KQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCWVPA 539
+ L++++++ +K YHKDFVID DN+WM QGWKGR+++A SCW PA
Sbjct: 530 RPAKLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWKPA 581
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 130/432 (30%), Positives = 223/432 (51%)
Query: 105 ELSDMFDKVLLLHVDSNGKPTMCTKGQGEDSLLQKGQSNGSGEKSRSRKQGKRKDTVDLR 164
EL+D K+ + G ++ DS +G +S +R DLR
Sbjct: 65 ELNDFKHKIREIETVMMGPDSLDLLVDCTDSFDSTASQEINGWRSTLEAISRR----DLR 120
Query: 165 TLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKS 224
L+ CA+A+S ND A+ +++++RQ S++G+ QRL + GL A++A SG+
Sbjct: 121 ADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYK 180
Query: 225 FLMSLAPRKSAADMLKAYKVYLSACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGF 284
L + P ++ ++L + CP+ K M I + ++ + +HI+DF I G
Sbjct: 181 AL-NRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGS 239
Query: 285 QWPMLIQFLSMRTGGPPRLRITGIELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNCI 344
QW LIQ + R GGPPR+RITGI+ + + G RL K ++FNVPFE+N +
Sbjct: 240 QWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSV 299
Query: 345 ASQNWETIQIEDLKINPDEVLAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDIFVN 404
S + ++ ++L + P E LAVN F ++ DE+V R+ +L++++ + P +
Sbjct: 300 -SVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTL 358
Query: 405 SIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACE 464
+ N F RF E + +++++F+ D T+PR+ +R+ E+ R+ +N+IACE
Sbjct: 359 VEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACE 418
Query: 465 GLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQG 524
G +RVER E +W++R AGF PL+ L+ + L Y + +++ + + G
Sbjct: 419 GADRVERHELLGKWRSRFGMAGFTPYPLSP-LVNSTIKSLLRNYSDKYRLEERDGALYLG 477
Query: 525 WKGRIVFASSCW 536
W R + AS W
Sbjct: 478 WMHRDLVASCAW 489
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 146/472 (30%), Positives = 233/472 (49%)
Query: 71 SPEGSRGRKNHQREDVDLDEERSNK----QSALYTEESELSDMFDKVLLLHVDSNGKPTM 126
SP N R + EE +N SA T E+ELS M + ++ P +
Sbjct: 139 SPISQANNNNLSRFNNHSPEENNNSPLSGSSATNTNETELSLMLKDLETAMME----PDV 194
Query: 127 CTKGQGEDSLLQKGQSNG--SGEKSRSRKQGKRKDTVDLRTLLILCAQAVSSNDYRTANE 184
+ GQ +G S RS + R D L+ +L CA+AV + D +
Sbjct: 195 DNSYNNQGGF---GQQHGVVSSAMYRSMEMISRGD---LKGVLYECAKAVENYDLEMTDW 248
Query: 185 LLKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKSFLMSLAPRKSAADMLKAYKV 244
L+ Q++Q S++G+ QRL + GL AR+A SG+ L P + ++L +
Sbjct: 249 LISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALRCKDP--TGPELLTYMHI 306
Query: 245 YLSACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGPPRLR 304
ACP+ K I + + S +HI+DF I G QW LI+ L R GGPP +R
Sbjct: 307 LYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVR 366
Query: 305 ITGIELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLKINPDEV 364
ITGI+ P+ F +E G+RL K + VPFE++ A E ++IE L + E
Sbjct: 367 ITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTE-VEIEKLGVRNGEA 425
Query: 365 LAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAI 424
LAVN ++ DE+V V R+ +L+L++ + P++ + N F+ RF E +
Sbjct: 426 LAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETM 485
Query: 425 FHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIR 484
H+ ++F+ D + R+ ER+ E+ RE +N+IACEG+ER ER E +W++R
Sbjct: 486 NHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHM 545
Query: 485 AGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 536
AGFK PL+ + + G L++ Y + + +++ + + GWK + + S W
Sbjct: 546 AGFKPYPLSSYVNATIKGLLES-YSEKYTLEERDGALYLGWKNQPLITSCAW 596
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 115/375 (30%), Positives = 196/375 (52%)
Query: 162 DLRTLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTG 221
DL+ +L+ CA+AVS N+ A + ++R S++G+ QRL + GL AR+A SG+
Sbjct: 49 DLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSS 108
Query: 222 TKSFLMSLAPRKSAADMLKAYKVYLSACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIR 281
L S P + + L V CP+ K M I + + +HI+DF I
Sbjct: 109 IYKSLQSREPE--SYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIG 166
Query: 282 YGFQWPMLIQFLSMRTGGPPRLRITGIELPQPGFRPAERIEETGRRLLKYCQRFNVPFEY 341
G QW LIQ + R GG P +RITG+ G + +RL K ++F+VPF +
Sbjct: 167 QGSQWIALIQAFAARPGGAPNIRITGV-----G--DGSVLVTVKKRLEKLAKKFDVPFRF 219
Query: 342 NCIASQNWETIQIEDLKINPDEVLAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDI 401
N ++ + E +++E+L + E L VN + +L DE+V + R+ +L++++ + P +
Sbjct: 220 NAVSRPSCE-VEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKV 278
Query: 402 FVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVI 461
+ N F+ RF E + +++++F+ D +PR ER+ E+ R+ +N+I
Sbjct: 279 VTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNII 338
Query: 462 ACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWM 521
ACEG ER+ER E +W++R AGF+ PL+ + + L+ Y + I++ + +
Sbjct: 339 ACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRD-YSNGYAIEERDGAL 397
Query: 522 LQGWKGRIVFASSCW 536
GW RI+ +S W
Sbjct: 398 YLGWMDRILVSSCAW 412
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 138/460 (30%), Positives = 233/460 (50%)
Query: 84 EDVDLDEERSNKQSALYTEESELSDMFDKVL----LLHVDSNGKPTMCTKGQGEDSLLQK 139
E+ D DE+ +K L E + L D DK++ L+ +DS ++ Q +DS K
Sbjct: 147 EEFD-DEQMRSKIQEL--ERALLGDEDDKMVGIDNLMEIDSEWSYQNESE-QHQDS--PK 200
Query: 140 GQSNGSGEKSRSRKQGKRKDTVDLRTLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDG 199
S+ S K+ + T + +LI CA+A+S A ++ ++RQ S+ GD
Sbjct: 201 ESSSADSNSHVSSKEVVSQATP--KQILISCARALSEGKLEEALSMVNELRQIVSIQGDP 258
Query: 200 SQRLAHWFANGLEARMAGSGTGTKSFLMSLAPRKSAAD-MLKAYKVYLSACPFKKLAIMF 258
SQR+A + GL ARMA SG K +L ++ +D L A +V CP K +
Sbjct: 259 SQRIAAYMVEGLAARMAASG---KFIYRALKCKEPPSDERLAAMQVLFEVCPCFKFGFLA 315
Query: 259 TIKMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGPPRLRITGIELPQPGFRPA 318
I++ + +HI+DF I G Q+ LI+ ++ G PRLR+TGI+ P+ R
Sbjct: 316 ANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTGIDDPESVQRSI 375
Query: 319 ERIEETGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLKINPDEVLAVNSLFRFKNLLD 378
+ G RL + + V F++ + S+ + L P E L VN F+ ++ D
Sbjct: 376 GGLRIIGLRLEQLAEDNGVSFKFKAMPSKT-SIVSPSTLGCKPGETLIVNFAFQLHHMPD 434
Query: 379 ETVDVNCPRNSVLKLIRKIKPDIF--VNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDT 436
E+V R+ +L +++ + P + V VN + +PFF RF EA ++S++F+ D
Sbjct: 435 ESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTN-TSPFF-PRFIEAYEYYSAVFESLDM 492
Query: 437 TMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQEL 496
T+PRE ER+ ER+ R+ +N++ACEG ER+ER E +W+AR + AGF P++ ++
Sbjct: 493 TLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKV 552
Query: 497 MEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 536
+ +K Y + + ++ + W+ + + +S W
Sbjct: 553 TNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAW 592
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 462 (167.7 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 117/372 (31%), Positives = 194/372 (52%)
Query: 167 LILCAQAVSSNDYRTANELLKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKSFL 226
L+ CA+AV N+ + A+ L+K + +S +++A +FA GL R+ + +
Sbjct: 156 LLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIY------RIYP 209
Query: 227 MSLAPRKSAADMLKAYKVYLSACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGFQW 286
S +D L+ + + +CP+ K A + I++V A +H++D G+ +G QW
Sbjct: 210 RDDVALSSFSDTLQIH--FYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQW 267
Query: 287 PMLIQFLSMRTGGPPRLRITGIELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNCIAS 346
P LIQ L++R GPP R+TGI G+ + I+E G +L + V FE+ IA
Sbjct: 268 PALIQALALRPNGPPDFRLTGI-----GYSLTD-IQEVGWKLGQLASTIGVNFEFKSIAL 321
Query: 347 QNWETIQIEDLKINPD-EVLAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDIFVNS 405
N ++ E L I P E +AVNS+F LL ++ L I+ I+PDI
Sbjct: 322 NNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSID----KFLSTIKSIRPDIMTVV 377
Query: 406 IVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEG 465
++N F+ RF E++ ++SSLFD + P +D R+M E + GR+ +N++ACEG
Sbjct: 378 EQEANHNGTVFLDRFTESLHYYSSLFDSLEGP-PSQD--RVMSELFL-GRQILNLVACEG 433
Query: 466 LERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQG 524
+RVER ET QW+ R GFK + + ++ L + D + ++++ +L G
Sbjct: 434 EDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLG 493
Query: 525 WKGRIVFASSCW 536
W+ R + A+S W
Sbjct: 494 WQTRPLIATSAW 505
Score = 40 (19.1 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 78 RKNHQREDVDLDEERSNKQSALYTEESELSDMFDKVLLLHVDSNGKPTMCTKGQGEDSLL 137
++ H + E S+ + + EE+ D VL V S+ + K + + +L
Sbjct: 2 KREHNHRESSAGEGGSSSMTTVIKEEAAGVDELLVVLGYKVRSSDMADVAHKLEQLEMVL 61
Query: 138 QKGQSNGSGE 147
G SN S E
Sbjct: 62 GDGISNLSDE 71
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 115/396 (29%), Positives = 204/396 (51%)
Query: 145 SGEKSRSRKQGKRKDT-VDLRTLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGSQRL 203
S E +RS ++T V L L+ CA+A+ + A+ L+K++ + ++
Sbjct: 161 SDESTRSVVLVDSQETGVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKV 220
Query: 204 AHWFANGLEARMAGSGTGTKSFLMSLAPRKSAADMLKAYKVYLSACPFKKLAIMFTIKMI 263
A +FA L R+ T ++ P S ++L+ + + +CP+ K A + I
Sbjct: 221 ATYFAQALARRIYRDYTAETDVCAAVNP--SFEEVLEMH--FYESCPYLKFAHFTANQAI 276
Query: 264 MKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGPPRLRITGIELPQPGFRPAERIEE 323
++ A +H++D G+ G QWP L+Q L++R GGPP R+TGI PQ ++ +++
Sbjct: 277 LEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQT--ENSDSLQQ 334
Query: 324 TGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLKINPD-EVLAVNSLFRFKNLLDETVD 382
G +L ++ Q V FE+ +A+++ ++ E + P+ E L VNS+F LL +
Sbjct: 335 LGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGS 394
Query: 383 VNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPRED 442
+ +L ++ IKP I ++N F+ RF EA+ ++SSLFD + +
Sbjct: 395 IE----KLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPS 450
Query: 443 PERLMFEREVY-GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLM 501
+R+M EVY GR+ +NV+A EG +RVER ET QW+ R AGF + L ++
Sbjct: 451 QDRVM--SEVYLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQAS 508
Query: 502 GKLKAWYHKD-FVIDQDNNWMLQGWKGRIVFASSCW 536
L + D + +++++ ++ GW+ R + +S W
Sbjct: 509 MLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAW 544
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 111/374 (29%), Positives = 192/374 (51%)
Query: 170 CAQAVSSNDYRTANELLKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKSFLMSL 229
CA+ +S +D A++ L QIR+ S GD ++R+A +F L R++ + T S
Sbjct: 224 CAR-ISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPNSPATSS----- 277
Query: 230 APRKSAADMLKAYKVYLSACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGFQWPML 289
S D++ +YK ACP+ K A + + I++ +EK++ +HIVDFGI G QWP L
Sbjct: 278 -SSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGIQWPAL 336
Query: 290 IQFLSMRTGGPP-RLRITGIELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNCIASQN 348
+Q L+ RT G P ++R++GI P G P + TG RL + + ++ F++ I +
Sbjct: 337 LQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFIPILTPI 396
Query: 349 WETIQIEDLKINPDEVLAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDIFVNSIVN 408
+ +++PDEVLAVN + + LLDET + ++ L+L + + P +
Sbjct: 397 -HLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIV---DTALRLAKSLNPRVVTLGEYE 452
Query: 409 GSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACE--GL 466
S N F R + A+ +S++F+ + + R+ ER+ ERE++GR +I E G+
Sbjct: 453 VSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKTGI 512
Query: 467 ERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAW---YHKDF-VIDQDNNWML 522
R ER E +QW+ AGF+ + L+ + + K+ W Y + +++ ++
Sbjct: 513 HR-ERMEEKEQWRVLMENAGFESVKLSNYAVSQ--AKILLWNYNYSNLYSIVESKPGFIS 569
Query: 523 QGWKGRIVFASSCW 536
W + S W
Sbjct: 570 LAWNDLPLLTLSSW 583
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 114/400 (28%), Positives = 196/400 (49%)
Query: 142 SNGSGEKSRSR-KQGKRKDTVDLRTLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGS 200
+ +GE +RS +++ V L L+ CA+A+ N+ A L+KQI +
Sbjct: 199 TTAAGESTRSVILVDSQENGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAM 258
Query: 201 QRLAHWFANGLEARMAGSGTGTKSFLMSLAPRKSAADMLKAYKVYLSACPFKKLAIMFTI 260
+++A +FA L R+ L+ D L+ + + CP+ K A
Sbjct: 259 RKVATYFAEALARRIYRLSPPQNQIDHCLS------DTLQMH--FYETCPYLKFAHFTAN 310
Query: 261 KMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGPPRLRITGIELPQPGFRPAER 320
+ I++ E +H++DF + G QWP L+Q L++R GGPP R+TGI P P ++
Sbjct: 311 QAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPD--NSDH 368
Query: 321 IEETGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLKINPD--EVLAVNSLFRFKNLLD 378
+ E G +L + + +V FEY + + + L++ P E +AVNS+F LL
Sbjct: 369 LHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLG 428
Query: 379 ETVDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTM 438
+ VL ++++IKP IF ++N P F+ RF E++ ++S+LFD +
Sbjct: 429 RPGGIE----KVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVP 484
Query: 439 PREDPERLMFEREVY-GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELM 497
+D ++M EVY G++ N++ACEG +RVER ET QW R +G L
Sbjct: 485 NSQD--KVM--SEVYLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAF 540
Query: 498 EKLMGKLKAWYH-KDFVIDQDNNWMLQGWKGRIVFASSCW 536
++ L + + + +++ N ++ GW R + +S W
Sbjct: 541 KQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAW 580
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 115/386 (29%), Positives = 196/386 (50%)
Query: 157 RKDTVDLRTLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGSQR-LAHWFANGLEARM 215
+++ V L L+ CA+AV + A L+KQI +++ G+ R +A +FA L R+
Sbjct: 163 QENGVRLVHALLACAEAVQKENLTVAEALVKQIG-FLAVSQIGAMRKVATYFAEALARRI 221
Query: 216 AGSGTGTKSFLMSLAPRKSAADMLKAYKVYLSACPFKKLAIMFTIKMIMKVSEKASTLHI 275
SL+ D L+ + + CP+ K A + I++ + +H+
Sbjct: 222 YRLSPSQSPIDHSLS------DTLQMH--FYETCPYLKFAHFTANQAILEAFQGKKRVHV 273
Query: 276 VDFGIRYGFQWPMLIQFLSMRTGGPPRLRITGIELPQPGFRPAERIEETGRRLLKYCQRF 335
+DF + G QWP L+Q L++R GGPP R+TGI P P + + E G +L +
Sbjct: 274 IDFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPD--NFDYLHEVGCKLAHLAEAI 331
Query: 336 NVPFEYNCIASQNWETIQIEDLKINPDEV--LAVNSLFRFKNLLDETVDVNCPRNSVLKL 393
+V FEY + + L++ P E+ +AVNS+F LL ++ VL +
Sbjct: 332 HVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAID----KVLGV 387
Query: 394 IRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVY 453
+ +IKP+IF ++N+P F+ RF E++ ++S+LFD + +D ++M EVY
Sbjct: 388 VNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGVPSGQD--KVM--SEVY 443
Query: 454 -GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYH--K 510
G++ NV+AC+G +RVER ET QW+ R AGF + K L A ++ +
Sbjct: 444 LGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAF-KQASMLLALFNGGE 502
Query: 511 DFVIDQDNNWMLQGWKGRIVFASSCW 536
+ +++ + ++ GW R + A+S W
Sbjct: 503 GYRVEESDGCLMLGWHTRPLIATSAW 528
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 439 (159.6 bits), Expect = 3.8e-41, P = 3.8e-41
Identities = 114/393 (29%), Positives = 198/393 (50%)
Query: 148 KSRSRKQGKRKDTVDLRTLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGSQRLAHWF 207
K ++Q + ++ + L TLL+ CA+AVS+++ AN+LL +I Q S+ G +QR+A +F
Sbjct: 275 KEEIKRQKQDEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYF 334
Query: 208 ANGLEARMAGSGTGTKSFLMSL-APRKSAADMLKAYKVYLSACPFKKLAIMFTIKMIMKV 266
+ + AR+ S G + L S P+ + M+ A++V+ P K + + I +
Sbjct: 335 SEAMSARLLNSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEA 394
Query: 267 SEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGPPRLRITGIELPQPGFRPAERIEETGR 326
EK ++HI+D I G QWP L L+ R GGPP +R+TG+ E ++ TG+
Sbjct: 395 FEKEDSVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSM------EALQATGK 448
Query: 327 RLLKYCQRFNVPFEYNCIASQNWETIQIEDLKINPDEVLAVNSLFRFKNLLDET-VDVNC 385
RL + + +PFE+ C ++ + E L + E +AV+ L +L D T D +
Sbjct: 449 RLSDFADKLGLPFEF-CPLAEKVGNLDTERLNVRKREAVAVHWLQH--SLYDVTGSDAH- 504
Query: 386 PRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPER 445
L L++++ P + V + +A F+ RF EAI ++S+LFD + E ER
Sbjct: 505 ----TLWLLQRLAPKV-VTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEER 559
Query: 446 LMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLK 505
+ E+++ +E NV+A G R + ++ W+ + + GFK + L + L
Sbjct: 560 HVVEQQLLSKEIRNVLAVGGPSRSGEVK-FESWREKMQQCGFKGISLAGNAATQATLLLG 618
Query: 506 AWYHKDFVIDQDNNWMLQGWKGRIVFASSCWVP 538
+ + + DN + GWK + +S W P
Sbjct: 619 MFPSDGYTLVDDNGTLKLGWKDLSLLTASAWTP 651
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 110/420 (26%), Positives = 206/420 (49%)
Query: 127 CTKGQGEDSLLQKGQSNGSGEKSRSRKQGKRKDT-VDLRTLLILCAQAVSSNDYRTANEL 185
C+ + ++ G S +R ++T V L L+ CA+AV + A+ L
Sbjct: 120 CSSNSNSNKRIRLGPWCDSVTSESTRSVVLIEETGVRLVQALVACAEAVQLENLSLADAL 179
Query: 186 LKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKSFLMSLAPRKSAADMLKAYKVY 245
+K++ ++ ++A +FA L R+ + + P S ++L+ +
Sbjct: 180 VKRVGLLAASQAGAMGKVATYFAEALARRIYRIHPSAAA----IDP--SFEEILQMN--F 231
Query: 246 LSACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGPPRLRI 305
+CP+ K A + I++ + +H++D G+ G QWP L+Q L++R GGPP R+
Sbjct: 232 YDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPSFRL 291
Query: 306 TGIELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLKINPD-EV 364
TG+ P R E I+E G +L + Q V F++N + ++ ++ + + + E
Sbjct: 292 TGVG--NPSNR--EGIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESET 347
Query: 365 LAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAI 424
L VNS+F +L + + +L ++ +KP + ++N F+ RF EA+
Sbjct: 348 LVVNSVFELHPVLSQPGSIE----KLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEAL 403
Query: 425 FHFSSLFDMFDTTMPREDPERLMFEREVY-GREAMNVIACEGLERVERPETYKQWQARTI 483
++SSLFD + + +R+M EVY GR+ +N++A EG +R+ER ET QW+ R
Sbjct: 404 HYYSSLFDSLEDGVVIPSQDRVM--SEVYLGRQILNLVATEGSDRIERHETLAQWRKRMG 461
Query: 484 RAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQGWKGRIVFASSCWVPAPEL 542
AGF + L + ++ L D + +++++ ++ W+ + + A+S W A EL
Sbjct: 462 SAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAWKLAAEL 521
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 264 (98.0 bits), Expect = 3.1e-37, Sum P(2) = 3.1e-37
Identities = 62/224 (27%), Positives = 113/224 (50%)
Query: 166 LLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKSF 225
LL+ CA V+S + AN L+Q+ +S GD QR+A +F L R+ S G
Sbjct: 57 LLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKA 116
Query: 226 LMSLAPR-KSAADMLKAYKVYLSACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGF 284
L + R + ++ + +++ P K++ + T + I++ E +H++D
Sbjct: 117 LNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPA 176
Query: 285 QWPMLIQFLSMRTGGPPRLRITGIELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNCI 344
QW L+Q + R GPP LRITG+ E +E+ RL++ ++ ++PF++N +
Sbjct: 177 QWLALLQAFNSRPEGPPHLRITGVH------HQKEVLEQMAHRLIEEAEKLDIPFQFNPV 230
Query: 345 ASQNWETIQIEDLKINPDEVLAVNSLFRFKNLL---DETVDVNC 385
S+ + + +E L++ E LAV+S+ + L D+ + NC
Sbjct: 231 VSR-LDCLNVEQLRVKTGEALAVSSVLQLHTFLASDDDLMRKNC 273
Score = 205 (77.2 bits), Expect = 3.1e-37, Sum P(2) = 3.1e-37
Identities = 42/149 (28%), Positives = 79/149 (53%)
Query: 388 NSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLM 447
+S L I + P + V + + +N + R E+++ +++LFD +T +PR +R+
Sbjct: 330 DSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIK 389
Query: 448 FEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAW 507
E+ ++G E N+I+CEG ER ER E ++W R AGF +PL+ M + L+
Sbjct: 390 VEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGC 449
Query: 508 YHKDFVIDQDNNWMLQGWKGRIVFASSCW 536
+ I +++ + W+ R +++ S W
Sbjct: 450 GFDGYRIKEESGCAVICWQDRPLYSVSAW 478
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 373 (136.4 bits), Expect = 5.7e-33, P = 5.7e-33
Identities = 101/367 (27%), Positives = 176/367 (47%)
Query: 181 TANELLKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKSFLMSLAPRKSAADMLK 240
T + L +I++ S +GD QR+ ++FA L + S + + S S D +
Sbjct: 190 TKPDTLIRIKESVSESGDPIQRVGYYFAEALSHKETESPSSSSS--------SSLEDFIL 241
Query: 241 AYKVYLSACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGP 300
+YK ACP+ K A + + I++ + +++ +HIVDFGI G QW L+Q L+ R+ G
Sbjct: 242 SYKTLNDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGK 301
Query: 301 P-RLRITGIELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLKI 359
P R+RI+GI P G P + TG RL + ++ FE+ + + + + ++
Sbjct: 302 PTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPI-QLLNGSSFRV 360
Query: 360 NPDEVLAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTR 419
+PDEVL VN + LLDET + L+L R + P I S N F R
Sbjct: 361 DPDEVLVVNFMLELYKLLDETATTV---GTALRLARSLNPRIVTLGEYEVSLNRVEFANR 417
Query: 420 FREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLE-----RVERPET 474
+ ++ +S++F+ + + R+ ERL ER ++GR M+++ + R E
Sbjct: 418 VKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEE 477
Query: 475 YKQWQARTIRAGFKQL-PLNQELMEKLMGKLKAW-YHKDFV---IDQDNNWMLQGWKGRI 529
+QW+ +AGF+ + P N + + KL W Y+ + ++ + ++ W
Sbjct: 478 KEQWRVLMEKAGFEPVKPSNYAVSQ---AKLLLWNYNYSTLYSLVESEPGFISLAWNNVP 534
Query: 530 VFASSCW 536
+ S W
Sbjct: 535 LLTVSSW 541
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 365 (133.5 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 118/471 (25%), Positives = 220/471 (46%)
Query: 81 HQREDVDLDEERSNKQSALYTEESELSDMFDKVLLLHVDSNGKPTMCTKGQGEDSLLQKG 140
H+ E++ L+ R ++ L ++ D D ++ + +S+ + T + +L
Sbjct: 187 HESENM-LNSLRELEKQLLDDDDESGGDD-DVSVITNSNSDWIQNLVTPNPNPNPVLSFS 244
Query: 141 QSNGSGEKSRSRKQGKRKDTVDLRTLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGS 200
S+ S S S +V R ++ A A++ A E+L ++ Q +L +
Sbjct: 245 PSSSSSSSSPST--ASTTTSVCSRQTVMEIATAIAEGKTEIATEILARVSQTPNLERNSE 302
Query: 201 QRLAHWFANGLEARMAGSGTGT--KSFLMSLAPRKSAADMLKAYKVYLSACPFKKLAIMF 258
++L + L +R+A T K L+S + ++ +K+ A LAI+
Sbjct: 303 EKLVDFMVAALRSRIASPVTELYGKEHLIST---QLLYELSPCFKLGFEAA---NLAILD 356
Query: 259 TIKMIMKVSEKASTL-HIVDFGIRYGFQWPMLIQFLSMRTGGP------PRLRITGIELP 311
++ + H++DF I G Q+ L++ LS R G P ++IT +
Sbjct: 357 AADN----NDGGMMIPHVIDFDIGEGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANN 412
Query: 312 QPGFRP----AERIEETGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLKINPDEVLAV 367
G ER++ G L + R + +N + S + E L +PDE LAV
Sbjct: 413 VYGCLVDDGGEERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAV 472
Query: 368 NSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDI--FVNSIVNGSYNAPFFVTRFREAIF 425
N F+ + DE+V PR+ +L+ ++ +KP + V +N S APF + R E+
Sbjct: 473 NLAFKLYRVPDESVCTENPRDELLRRVKGLKPRVVTLVEQEMN-SNTAPF-LGRVSESCA 530
Query: 426 HFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRA 485
+ +L + ++T+P + +R E + GR+ +N +ACEG++R+ER E + +W+ R A
Sbjct: 531 CYGALLESVESTVPSTNSDRAKVEEGI-GRKLVNAVACEGIDRIERCEVFGKWRMRMSMA 589
Query: 486 GFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 536
GF+ +PL++++ E + + H F + +DN + GW GR + +S W
Sbjct: 590 GFELMPLSEKIAESMKSRGNR-VHPGFTVKEDNGGVCFGWMGRALTVASAW 639
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 298 (110.0 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 90/354 (25%), Positives = 161/354 (45%)
Query: 200 SQRLAHWFANGLEARMAGSGTGTKSFLMS---LAPRKSAADMLKAYKVYLSAC-PFKKLA 255
++ +A W N E M+ S T S + + +D Y ++L+ PF +
Sbjct: 102 AETVATWTTN--EMTMSNSTVFTSSVCKEQFLFRTKNNNSDFESCYYLWLNQLTPFIRFG 159
Query: 256 IMFTIKMIMKVSEKAST--LHIVDFGIRYGFQWPMLIQFLSMRTGGP----PRLRITGIE 309
+ + I+ +E LHI+D I G QWP L+Q L+ R+ P P LRITG
Sbjct: 160 HLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGC- 218
Query: 310 LPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNCIASQNWET----IQIEDLKINP--DE 363
G R + TG RL ++ + F+++ + + +QI L ++ E
Sbjct: 219 ----G-RDVTGLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGE 273
Query: 364 VLAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREA 423
+AVN + + ++ D+ L I+ + I + ++ F+ RF EA
Sbjct: 274 TIAVNCVHFLHKIFNDDGDMI---GHFLSAIKSLNSRIVTMAEREANHGDHSFLNRFSEA 330
Query: 424 IFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTI 483
+ H+ ++FD + T+P ERL E+ +G+E ++V+A E ER +R ++ W+
Sbjct: 331 VDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWEEMMK 390
Query: 484 RAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQGWKGRIVFASSCW 536
R GF +P+ + + L+ Y + + + NN + GW+ R +F+ S W
Sbjct: 391 RFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPLFSVSSW 444
Score = 87 (35.7 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 163 LRTLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGSQRLAHWFANGLEARM 215
LR LL A VS +++ A LL + +SS GD ++RL H F L R+
Sbjct: 41 LRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRI 93
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 346 (126.9 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 101/391 (25%), Positives = 180/391 (46%)
Query: 165 TLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKS 224
++L+ A+A S D A ++L + + SS GD Q+LA +F L RM GSG
Sbjct: 145 SVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYR 204
Query: 225 FLMSLAPRKSAADMLKAYKVYLS---ACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIR 281
+++ A + K L P+ + I++ + + +HIVD
Sbjct: 205 TMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISST 264
Query: 282 YGFQWPMLIQFLSMRTGGPPRLRITGIELPQPGFRP---AERI-EETGRRLLKYCQRFNV 337
+ QWP L++ L+ R+ P LR+T + + + R+ +E G R+ K+ + V
Sbjct: 265 FCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGV 324
Query: 338 PFEYNCIASQ-NWETIQIEDLKINPDEVLAVNSLFRFKNLLDETVDVNCPRNSVLKLIRK 396
PF++N I + + +L + PDEVLA+N + + PR++V+ R+
Sbjct: 325 PFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASR----GSPRDAVISSFRR 380
Query: 397 IKPDIFV----NSIVNGSYNAPF---FVTRFREAIFHFSSLFDMFDTTMPREDPERLMFE 449
++P I + + G F F+ F E + F F+ ++ + PR ERLM E
Sbjct: 381 LRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLE 440
Query: 450 REVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYH 509
R GR ++++ACE + ER ET ++W R +GF + + E+ + + L+ +
Sbjct: 441 RAA-GRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKE 499
Query: 510 KDFVIDQ--DNNWMLQGWKGRIVFASSCWVP 538
+ + Q D + W+ + V +S W P
Sbjct: 500 GVWSMVQCPDAAGIFLCWRDQPVVWASAWRP 530
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 323 (118.8 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 102/385 (26%), Positives = 173/385 (44%)
Query: 161 VDLRTLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGT 220
+ L +LL+ CA+ V+++ R A+ LL +I + S G +R+ +FA L+ R+ S
Sbjct: 38 IKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYL 97
Query: 221 GTKSFLMSLAPRK--SAADMLKAYKVYLSACPFKKLAIMFTIKMIMKVSEKASTLHIVDF 278
+S P + + A + Y S P K + + I + + ++HI+D
Sbjct: 98 SGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDL 157
Query: 279 GIRYGFQWPMLIQFLSMRTGGPPRLRITGIELPQPGFRPAERIEETGRRLLKYCQRFNVP 338
+ G QWP L L+ R +RITG G ++ + TGRRL + N+P
Sbjct: 158 DVMQGLQWPALFHILASRPRKLRSIRITGF-----G-SSSDLLASTGRRLADFASSLNLP 211
Query: 339 FEYNCIASQNWETIQIEDLKINPDEVLAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIK 398
FE++ I I L E + V+ + L D T + N L+++R++K
Sbjct: 212 FEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQH--RLYDVTGN-NL---ETLEILRRLK 265
Query: 399 PDIFVNSIVNGSYN-APFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREA 457
P++ SY+ F+ RF EA+ ++S+LFD + E ER E+ V G E
Sbjct: 266 PNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEI 325
Query: 458 MNVIACEGLERVERPETYKQWQARTIRAGFKQLPL--NQELMEKLMGKLKAWYHKDFVID 515
N++A G R +R +W+ R GF+ + L N L+ + W + +
Sbjct: 326 RNIVAHGGGRR-KR----MKWKEELSRVGFRPVSLRGNPATQAGLLLGMLPW--NGYTLV 378
Query: 516 QDNNWMLQGWKGRIVFASSCWVPAP 540
++N + GWK + +S W P
Sbjct: 379 EENGTLRLGWKDLSLLTASAWKSQP 403
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 314 (115.6 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 111/394 (28%), Positives = 175/394 (44%)
Query: 163 LRTLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGT 222
+ LL+ CA A+ SND +++L + + GD +QRL F L +R A S T T
Sbjct: 27 MEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSR-AVSKTPT 85
Query: 223 KSFLMSLAPRKSAADMLKAYKV-----YLSACPFKKLAIMFTIKMIMKVSEKASTLHIVD 277
S +S P+ AD L + V ++ P+ + + I+ E ST+HIVD
Sbjct: 86 LSSTISFLPQ---ADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVD 142
Query: 278 FGIRYGFQWPMLIQFLSMRTGGPPRLRITGIELPQPGFRPAERI--EETGRRLLKYCQRF 335
+ + Q P LI ++ R PP L + F P I EE G +L+ +
Sbjct: 143 LSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTR 202
Query: 336 NVPFEYNCIASQNWETIQ--IEDLKINP---DEVLAVNSLFRFKNLLDE--TVDVNCPRN 388
N+ E+ + S + ++ L+I P +E L VN + + +E T + R
Sbjct: 203 NITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRT 262
Query: 389 SVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMF 448
LK +R + P I + + V R + A +F FD DT M + R +
Sbjct: 263 VFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFMSEQ---RRWY 319
Query: 449 EREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLK--- 505
E E+ + NV+A EG ERVER ET ++W R A F + + ++ + + L+
Sbjct: 320 EAEISWK-IENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHA 378
Query: 506 -AWYHKDFVIDQDNNWMLQGWKGRIVFASSCWVP 538
W K D D + +L WKG V ++ WVP
Sbjct: 379 VGWGMKKE--DDDESLVLT-WKGHSVVFATVWVP 409
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 304 (112.1 bits), Expect = 3.9e-24, P = 3.9e-24
Identities = 96/366 (26%), Positives = 165/366 (45%)
Query: 145 SGEKSRSRKQGKRKDTVDLRTLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGSQ-RL 203
+G + + + + +L LL C A+ S + N + + +S G RL
Sbjct: 256 TGNINNNNNRNDLQRDFELVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRL 315
Query: 204 AHWFANGLEARMAGSGTGTKSFLMSLAP-----RKSAADMLKAYKVYLSACPFKKLAIMF 258
++ L R+A + +AP R + A + P K I F
Sbjct: 316 IAYYIEALALRVARMWP----HIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKF-IHF 370
Query: 259 TI-KMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGPPRLRITGIELPQPGFRP 317
T +M+++ E +HI+DF I+ G QWP Q L+ R P +RITGI G
Sbjct: 371 TANEMLLRAFEGKERVHIIDFDIKQGLQWPSFFQSLASRINPPHHVRITGI-----GESK 425
Query: 318 AERIEETGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLKINPDEVLAVNSLFRF-KNL 376
E + ETG RL + + N+ FE++ + + E +++ L + E +AVN + + K L
Sbjct: 426 LE-LNETGDRLHGFAEAMNLQFEFHPVVDR-LEDVRLWMLHVKEGESVAVNCVMQMHKTL 483
Query: 377 LDETVDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDT 436
D T L LIR P V + +N+ TR ++ ++S++FD T
Sbjct: 484 YDGT---GAAIRDFLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHT 540
Query: 437 TMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQ-E 495
+ + R+ E ++GRE N++ACEG R ER ++ W+ + GF+ L +++ E
Sbjct: 541 NLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSERE 600
Query: 496 LMEKLM 501
+++ M
Sbjct: 601 VLQSKM 606
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 268 (99.4 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 107/445 (24%), Positives = 178/445 (40%)
Query: 107 SDMFDKVLLLHVDSNGKPTMCTKGQGEDSLLQKGQSNGSGEKSRSRKQGKRKDTVDLRTL 166
S M D+ ++ +S P + ++ L + S S + K ++ LR +
Sbjct: 50 SIMGDEGAMMEPESEAVPML----HDQEGLCNSASTGLSVADGVSFGEPKTDESKGLRLV 105
Query: 167 LILCAQAVSSNDYRTANELLKQIRQH-SSLTGDGS----QRLAHWFANGLEARMAGSGTG 221
+L A A +S + EL + I L G +RLA F NGL +
Sbjct: 106 HLLVAAADASTGANKSRELTRVILARLKDLVSPGDRTNMERLAAHFTNGLSKLLERD--- 162
Query: 222 TKSFLMSLAPRKSA---ADMLKAYKVYLSACPFKKLAIMFTIKMIMKVSEKASTLHIVDF 278
S L R AD++ A+++ + P+ + + I++ + +HIVD+
Sbjct: 163 --SVLCPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVKYERRIHIVDY 220
Query: 279 GIRYGFQWPMLIQFLSMRTGGPP--RLRITGIELPQPGFRPAERIEETGRRLLKYCQRFN 336
I G QW L+Q L R GP LRIT + G + ++ETGRRL +
Sbjct: 221 DINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTAFADSIG 280
Query: 337 VPFEY-NCIASQNWETIQIEDLKINPDEVLAVNSLFRFKNLLDETVDVNCPRNSVLKLIR 395
PF Y +C N LK+ E + +N + +T S L +
Sbjct: 281 QPFSYQHCKLDTN--AFSTSSLKLVRGEAVVINCMLHLPRFSHQTPSSVI---SFLSEAK 335
Query: 396 KIKPDI--FVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVY 453
+ P + V+ V G F+ RF + + FS++FD + + +P R ER
Sbjct: 336 TLNPKLVTLVHEEV-GLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVERVFI 394
Query: 454 GREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLK-AWYHKDF 512
G N + E E++ W GFK PL + KL + ++ F
Sbjct: 395 GPWVANWLTRITANDAE-VESFASWPQWLETNGFK--PLEVSFTNRCQAKLLLSLFNDGF 451
Query: 513 VIDQ-DNNWMLQGWKGRIVFASSCW 536
+++ N ++ GWK R + ++S W
Sbjct: 452 RVEELGQNGLVLGWKSRRLVSASFW 476
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 174 (66.3 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 57/213 (26%), Positives = 97/213 (45%)
Query: 139 KGQSNGSGEKSRSRKQGKRKDTV-----DLRTLLILCAQAVSSNDYRTANELLKQI-RQH 192
K G GE + + + G + V R LL+ CA + D A + +
Sbjct: 21 KNNGGGGGEAAAAVEGGGDQRAVAAAAPSTRDLLLACADLLQRGDLPAARRAAEIVLAAA 80
Query: 193 SSLTGDGSQRLAHWFANGLEARM-AGSGTGTKSFLMSLAPRKSAADMLKAYKVYLSACPF 251
+S GD + RLA+ FA L R+ A +G G + A R +++ AY + PF
Sbjct: 81 ASPRGDAADRLAYHFARALALRVDAKAGHG-HVVVGGGAARPASSG---AYLAFNQIAPF 136
Query: 252 KKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTG---GPPRLRITGI 308
+ A + + I++ + A +HI+D +G QWP L+Q ++ R GPP +R+TG
Sbjct: 137 LRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWPPLLQAIAERADPALGPPEVRVTGA 196
Query: 309 ELPQPGFRPAERIEETGRRLLKYCQRFNVPFEY 341
+ + + TG RL + + ++PF +
Sbjct: 197 GADR------DTLLRTGNRLRAFARSIHLPFHF 223
Score = 131 (51.2 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 49/192 (25%), Positives = 82/192 (42%)
Query: 357 LKINPDEVLAVNSLFRFKNLL--DETVDVNCPRNSVLKLIRKIKPDIFV------NSIVN 408
L+ +PDE LAVN + NL DE + LK ++ + P +
Sbjct: 258 LEFHPDETLAVNCVMFLHNLAGHDELA-------AFLKWVKAMSPAVVTIAEREAGGGGG 310
Query: 409 GSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLER 468
G + R A+ H+S++F+ + T+P ERL E+EV GRE + G R
Sbjct: 311 GGDHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSG-GR 369
Query: 469 VERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKD-FVIDQDNNWMLQGWKG 527
R ++W AGF PL+ + + L+ Y + +++ + GW+
Sbjct: 370 WWRG--IERWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQT 427
Query: 528 RIVFASSCWVPA 539
R + + S W P+
Sbjct: 428 RPLLSVSAWQPS 439
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 232 (86.7 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 104/417 (24%), Positives = 181/417 (43%)
Query: 131 QGEDSLLQKGQSNGSGEKSRSRKQGKRKDTVDLRTLLILCAQAVSSNDYRTANELLKQIR 190
Q + S K ++ S EKS K G ++ LL CA A+++++ L +
Sbjct: 116 QVKKSARSKRKAIKSSEKSS--KDGNKEGRW-AEKLLNPCALAITASNSSRVQHYLCVLS 172
Query: 191 QHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKS---FLMSLAPRKS-AADMLKAYKVY- 245
+ +S +GD ++RLA + L+ ++ S + F + A K +LK Y+V
Sbjct: 173 ELASSSGDANRRLAAFGLRALQHHLSSSSVSSSFWPVFTFASAEVKMFQKTLLKFYEVSP 232
Query: 246 LSACPFKKLAIMFTIKMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGPP-RLR 304
A P +A ++++ + + LHI+D G+ +G QWP L++ LS R GPP R+R
Sbjct: 233 WFALP-NNMANSAILQILAQDPKDKKDLHIIDIGVSHGMQWPTLLEALSCRLEGPPPRVR 291
Query: 305 ITGI-ELPQP-GFRPAERIEETGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLKINPD 362
IT I +L F G +LL + + + + + + + +Q+ D +P
Sbjct: 292 ITVISDLTADIPFSVGPPGYNYGSQLLGFARSLKINLQISVL-----DKLQLIDT--SPH 344
Query: 363 EVLAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPF-FVTRFR 421
E L V + FR +L +N R LK +R ++P V NG ++ F F
Sbjct: 345 ENLIVCAQFRLHHLKHS---INDERGETLKAVRSLRPKGVVLCENNGECSSSADFAAGFS 401
Query: 422 EAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQAR 481
+ + + D + E+ E ER++ EA V+ G + E ++W R
Sbjct: 402 KKLEYVWKFLDSTSSGFKEENSE----ERKLMEGEATKVLMNAG----DMNEGKEKWYER 453
Query: 482 TIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQG--WKGRIVFASSCW 536
AGF ++ ++ L+ Y ++ I ++ G WKG V S W
Sbjct: 454 MREAGFFVEAFEEDAVDGAKSLLRK-YDNNWEIRMEDGDTFAGLMWKGEAVSFCSLW 509
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 156 (60.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 56/201 (27%), Positives = 97/201 (48%)
Query: 285 QWPMLIQFLS--MRTGGPPRLRITGIELPQPGFRPAERI----EETGRRLLKYCQRFNVP 338
Q P LI ++ + PP L++T I F P + EE G +L+ + NV
Sbjct: 2 QIPTLIDSMANKLHKKPPPLLKLTVIA-SDAEFHPPPLLGISYEELGSKLVNFATTRNVA 60
Query: 339 FEYNCIASQNWETIQ--IEDLKINP---DEVLAVNSLFRFKNLLDETVDVNCPRNSVLKL 393
E+ I+S + + IE L+I+P +E L VN + DE + N R+ LK
Sbjct: 61 MEFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDEILTSNL-RSVFLKE 119
Query: 394 IRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSL-FDMFDTTMPREDPERLMFEREV 452
+R + P I + + + F++R R +++++ + +D + + R +R +E ++
Sbjct: 120 LRDLNPTIVTLIDEDSDFTSTNFISRLR-SLYNYMWIPYDTAEMFLTRGSEQRQWYEADI 178
Query: 453 YGREAMNVIACEGLERVERPE 473
+ NV+A EG ERVER E
Sbjct: 179 SWK-IDNVVAKEGAERVERLE 198
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 150 (57.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 91/462 (19%), Positives = 185/462 (40%)
Query: 84 EDVDLDEERS-NKQSALYTEESELSDMFDKVLLLHVDSN--GKPTMCTKGQGEDSL-LQK 139
++++LD++ + N +T + S + L VDSN G P E S +
Sbjct: 43 KELELDDDSAPNSLKTGFTTTTTDSTILP---LYAVDSNLPGFPDQIQPSDFESSSDVYP 99
Query: 140 GQSNGSGEKSRSRKQGKRKDTVDLRTLLILCAQAVSSNDYRTANELLKQIRQH-SSLTGD 198
GQ+ +G S D LI V S++ + A +L ++ Q S G
Sbjct: 100 GQNQTTGYGFNSL-DSVDNGGFDFIEDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGR 158
Query: 199 GSQRLAHWFANGLEARMAGSGTGTKSFLMSLAPRKSAADMLKAYKVYLSACPFKKLAIMF 258
QR A +F L + + GS + L+ ++A K Y P +
Sbjct: 159 PLQRAAFYFKEALGSFLTGSNRNP----IRLSSWSEIVQRIRAIKEYSGISPIPLFSHFT 214
Query: 259 TIKMIM-KVSEKAST--LHIVDFGIRYGFQWPMLIQFLSMRTGGPPRLRITGIELPQPGF 315
+ I+ +S ++S+ +H+VDF I +G Q+ L++ ++ ++ LR+T + +
Sbjct: 215 ANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREITEKSVSGGFLRVTAVVAEECAV 274
Query: 316 RPAERIEETGRRLLKYCQRFNVPFEYNCIASQNWETIQIEDLK-INPDEVLAVNSLFRFK 374
++E L ++ + F+ + + +E + + ++ + + + + S F+
Sbjct: 275 E-TRLVKEN---LTQFAAEMKIRFQIEFVLMKTFEMLSFKAIRFVEGERTVVLISPAIFR 330
Query: 375 NLLDETVDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMF 434
L T VN R K++ + + + +GS+ F A+ ++ + +
Sbjct: 331 RLSGITDFVNNLRRVSPKVVVFVDSEGWTEIAGSGSFRREFV-----SALEFYTMVLESL 385
Query: 435 DTTMPREDPERLMFEREVYGREAMNVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQ 494
D P D + + E V R ++ +R E W+ AG + + L+Q
Sbjct: 386 DAAAPPGDLVKKIVEAFVL-RPKISAAVETAADRRHTGEM--TWREAFCAAGMRPIQLSQ 442
Query: 495 ELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 536
+ L+ + F + + ++ W GR + A+S W
Sbjct: 443 FADFQAECLLEKAQVRGFHVAKRQGELVLCWHGRALVATSAW 484
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 64/223 (28%), Positives = 99/223 (44%)
Query: 228 SLAPRKSAADMLKAYKVYLSACPFKKLAIMFTIKM-IMKVSEKASTLHIVDFGIRYGFQW 286
SL+P ++ + AY+ + PF + + FT I++ E +HIVDF I YG QW
Sbjct: 316 SLSPPQNLIFRIAAYRAFSETSPFLQF-VNFTANQTILESFEGFDRIHIVDFDIGYGGQW 374
Query: 287 PMLIQFLS---MRTGGPPRLRITGIELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYNC 343
LIQ L+ R+ P L+IT P E + T L + V FE
Sbjct: 375 ASLIQELAGKRNRSSSAPSLKITAFASPSTVSDEFE-LRFTEENLRSFAGETGVSFEI-- 431
Query: 344 IASQNWETIQIEDLKINPDEVLAVNSLFRFKNLLDETVDVNCPRNS--------VLKLIR 395
E + +E L +NP SLFR E + VN P +S +L+ ++
Sbjct: 432 ------ELLNMEIL-LNP--TYWPLSLFRSSE--KEAIAVNLPISSMVSGYLPLILRFLK 480
Query: 396 KIKPDIFVNSIVNGSYN--APFFVTRFREAIFHFSSLFDMFDT 436
+I P++ V S + N APF A+ +++SL + D+
Sbjct: 481 QISPNVVVCSDRSCDRNNDAPF-PNGVINALQYYTSLLESLDS 522
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 140 (54.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 73/315 (23%), Positives = 132/315 (41%)
Query: 239 LKAYKVYLSACPFKKLAIMFTIKM-IMKVSEKAS--TLHIVDFGIRYGFQWPMLIQFLSM 295
+ AY+ + PF + + FT I++ ++ +HI+DF + YG QW L+Q L+
Sbjct: 347 IAAYRSFSETSPFLQF-VNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLMQELAS 405
Query: 296 RTGGPPRLRITGIEL----PQPGFRPAE-RIEETGRRLLKYCQRFNVPFEYNCIASQNWE 350
GG R R + ++L P P E + T L + +PFE E
Sbjct: 406 GVGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEI--------E 457
Query: 351 TIQIEDLKINPDEVLAVNSLFRFKNLLDETVDVNCPRNSV--------LKLIRKIKPDIF 402
+ +E L +NP A L ++ E + VN P NSV L+ ++++ P+I
Sbjct: 458 LLSVE-LLLNP----AYWPL-SLRSSEKEAIAVNLPVNSVASGYLPLILRFLKQLSPNIV 511
Query: 403 VNSIVNGSYN-APFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMNVI 461
V S N APF +H +SL + D ++D ER + + ++ +
Sbjct: 512 VCSDRGCDRNDAPFPNAVIHSLQYH-TSLLESLDANQNQDDSS---IER-FWVQPSIEKL 566
Query: 462 ACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWM 521
+ +ER W+ + GF L+Q + L+ + F +++ + +
Sbjct: 567 LMKRHRWIERSPP---WRILFTQCGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSL 623
Query: 522 LQGWKGRIVFASSCW 536
+ W+ + + S W
Sbjct: 624 VMCWQRKELVTVSAW 638
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 114 (45.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 466 LERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGW 525
+ERVER E +W+ R AGF Q PL+ + ++ L Y + + + + + ML GW
Sbjct: 1 MERVERHELLGKWKLRFTMAGFHQYPLSS-YVNSVIKSLMRCYSEHYTLVEKDGAMLLGW 59
Query: 526 KGRIVFASSCW 536
K R + ++S W
Sbjct: 60 KKRNLISASAW 70
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 72/377 (19%), Positives = 155/377 (41%)
Query: 167 LILCAQAVSSNDYRTANELLKQIRQH-SSLTGDGSQRLAHWFANGLEARMAGSGTGTKSF 225
LI + S++ A+ +L Q+ Q + G QR A +F L + + G+ ++
Sbjct: 103 LIRVVDCIESDELHLAHVVLSQLNQRLQTSAGRPLQRAAFYFKEALGSLLTGTN---RNQ 159
Query: 226 LMSLAPRKSAADMLKAYKVYLSACPFKKLAIMFTIKMIM-KVSEKAST--LHIVDFGIRY 282
L S + ++A K + P + + I+ +S ++S+ +H+VDF I +
Sbjct: 160 LFSWS---DIVQKIRAIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGF 216
Query: 283 GFQWPMLIQFLSMRTGGPPRLRITGIELPQPGFRPAERIEETGRRLLKYCQRFNVPFEYN 342
G Q+ L++ ++ ++ LR+T + ++E L ++ + F+
Sbjct: 217 GGQYASLMREIAEKSANGGFLRVTAVVAEDCAVE-TRLVKEN---LTQFAAEMKIRFQIE 272
Query: 343 CIASQNWETIQIEDLKINPDE---VLAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKP 399
+ + +E + + ++ E VL ++FR + E V+ N R S ++ +
Sbjct: 273 FVLMKTFEILSFKAIRFVDGERTVVLISPAIFRRVIGIAEFVN-NLGRVSP-NVVVFVDS 330
Query: 400 DIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTMPREDPERLMFEREVYGREAMN 459
+ + +GS+ F V+ F ++ + + D P D + + E + R ++
Sbjct: 331 EGCTETAGSGSFRREF-VSAFE----FYTMVLESLDAAAPPGDLVKKIVETFLL-RPKIS 384
Query: 460 VIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNN 519
R R W+ AG + + L+Q + L+ + F + +
Sbjct: 385 AAVETAANR--RSAGQMTWREMLCAAGMRPVQLSQFADFQAECLLEKAQVRGFHVAKRQG 442
Query: 520 WMLQGWKGRIVFASSCW 536
++ W GR + A+S W
Sbjct: 443 ELVLCWHGRALVATSAW 459
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 542 530 0.00092 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 612 (65 KB)
Total size of DFA: 308 KB (2158 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.06u 0.10s 46.16t Elapsed: 00:00:02
Total cpu time: 46.07u 0.10s 46.17t Elapsed: 00:00:02
Start: Fri May 10 23:12:19 2013 End: Fri May 10 23:12:21 2013