Query 046163
Match_columns 357
No_of_seqs 295 out of 2203
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 09:18:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046163.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046163hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF01657 Stress-antifung: Salt 99.9 2E-24 4.3E-29 174.4 9.3 103 30-136 1-106 (106)
2 PF01657 Stress-antifung: Salt 99.9 4.9E-23 1.1E-27 166.2 9.5 90 156-246 16-106 (106)
3 PF11883 DUF3403: Domain of un 97.4 0.00019 4.1E-09 48.9 4.0 44 313-357 3-48 (48)
4 KOG1187 Serine/threonine prote 92.0 0.12 2.6E-06 50.6 3.0 28 284-311 324-351 (361)
5 cd05038 PTKc_Jak_rpt2 Catalyti 75.9 2.2 4.7E-05 39.0 2.7 29 283-311 254-282 (284)
6 cd05116 PTKc_Syk Catalytic dom 73.8 2.7 5.9E-05 38.0 2.8 29 283-311 226-254 (257)
7 cd05068 PTKc_Frk_like Catalyti 73.8 2.9 6.2E-05 37.9 2.9 30 282-311 231-260 (261)
8 cd08528 STKc_Nek10 Catalytic d 71.4 3.7 8E-05 37.3 3.0 27 284-310 242-268 (269)
9 cd05051 PTKc_DDR Catalytic dom 70.5 3.5 7.7E-05 38.0 2.8 28 283-310 268-295 (296)
10 cd05097 PTKc_DDR_like Catalyti 70.5 3.5 7.5E-05 38.3 2.7 28 283-310 267-294 (295)
11 cd05063 PTKc_EphR_A2 Catalytic 69.9 3.9 8.6E-05 37.1 2.9 29 283-311 238-266 (268)
12 cd05095 PTKc_DDR2 Catalytic do 69.8 4 8.7E-05 37.9 3.0 28 283-310 268-295 (296)
13 cd05114 PTKc_Tec_Rlk Catalytic 69.3 3.8 8.2E-05 37.0 2.6 27 284-310 230-256 (256)
14 cd05148 PTKc_Srm_Brk Catalytic 68.5 4.2 9.1E-05 36.7 2.7 29 283-311 232-260 (261)
15 PLN00113 leucine-rich repeat r 67.9 3.7 8E-05 45.3 2.6 29 284-312 923-951 (968)
16 cd05096 PTKc_DDR1 Catalytic do 67.5 4.5 9.7E-05 37.7 2.8 28 283-310 276-303 (304)
17 cd05045 PTKc_RET Catalytic dom 67.0 4.8 0.0001 37.1 2.9 29 283-311 257-285 (290)
18 cd05052 PTKc_Abl Catalytic dom 66.7 5 0.00011 36.4 2.9 29 283-311 233-261 (263)
19 cd05033 PTKc_EphR Catalytic do 66.6 4.8 0.0001 36.5 2.8 29 283-311 236-264 (266)
20 cd05112 PTKc_Itk Catalytic dom 66.0 4.7 0.0001 36.2 2.5 28 283-310 229-256 (256)
21 cd05094 PTKc_TrkC Catalytic do 65.6 4.7 0.0001 37.3 2.5 28 284-311 254-281 (291)
22 cd05104 PTKc_Kit Catalytic dom 64.3 4.7 0.0001 39.2 2.3 28 284-311 346-373 (375)
23 cd05102 PTKc_VEGFR3 Catalytic 64.2 5.1 0.00011 38.0 2.5 29 283-311 305-333 (338)
24 cd05048 PTKc_Ror Catalytic Dom 63.9 5.7 0.00012 36.3 2.7 29 283-311 254-282 (283)
25 cd05062 PTKc_IGF-1R Catalytic 62.4 6.1 0.00013 36.1 2.6 27 284-310 250-276 (277)
26 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 62.2 6.4 0.00014 36.1 2.7 29 283-311 254-282 (284)
27 cd05072 PTKc_Lyn Catalytic dom 61.4 7.1 0.00015 35.2 2.9 29 283-311 232-260 (261)
28 cd05080 PTKc_Tyk2_rpt2 Catalyt 61.4 6.7 0.00015 36.0 2.7 28 284-311 253-280 (283)
29 cd05050 PTKc_Musk Catalytic do 60.9 7.6 0.00016 35.7 3.0 28 283-310 260-287 (288)
30 cd05054 PTKc_VEGFR Catalytic d 60.1 6.7 0.00015 37.5 2.5 29 283-311 304-332 (337)
31 PF07714 Pkinase_Tyr: Protein 59.9 5.2 0.00011 36.4 1.6 26 284-309 234-259 (259)
32 cd08229 STKc_Nek7 Catalytic do 59.1 8.7 0.00019 34.7 3.0 27 284-310 237-263 (267)
33 cd05065 PTKc_EphR_B Catalytic 58.5 7.6 0.00016 35.2 2.5 28 284-311 240-267 (269)
34 PHA02988 hypothetical protein; 57.0 8.6 0.00019 35.6 2.6 27 284-310 251-277 (283)
35 cd05059 PTKc_Tec_like Catalyti 56.9 8.7 0.00019 34.6 2.6 27 283-309 229-255 (256)
36 cd05084 PTKc_Fes Catalytic dom 56.5 8.6 0.00019 34.4 2.5 27 284-310 225-251 (252)
37 cd05066 PTKc_EphR_A Catalytic 56.1 9.7 0.00021 34.5 2.8 29 283-311 237-265 (267)
38 cd08224 STKc_Nek6_Nek7 Catalyt 55.2 11 0.00024 33.9 3.0 29 283-311 236-264 (267)
39 cd05113 PTKc_Btk_Bmx Catalytic 54.8 10 0.00022 34.3 2.7 28 283-310 229-256 (256)
40 KOG1187 Serine/threonine prote 54.6 4.2 9.1E-05 39.8 0.1 39 317-355 70-108 (361)
41 cd05078 PTK_Jak2_Jak3_rpt1 Pse 54.6 9 0.0002 34.6 2.3 26 285-310 233-258 (258)
42 cd05060 PTKc_Syk_like Catalyti 54.3 9.3 0.0002 34.4 2.3 28 284-311 227-254 (257)
43 cd05075 PTKc_Axl Catalytic dom 54.0 11 0.00024 34.0 2.8 28 284-311 243-270 (272)
44 cd05053 PTKc_FGFR Catalytic do 53.5 11 0.00024 34.6 2.8 29 283-311 262-290 (293)
45 cd05091 PTKc_Ror2 Catalytic do 53.0 12 0.00027 34.1 3.0 27 284-310 255-281 (283)
46 cd05085 PTKc_Fer Catalytic dom 52.7 13 0.00027 33.2 2.9 28 283-310 222-249 (250)
47 cd05035 PTKc_Axl_like Catalyti 52.4 11 0.00024 34.0 2.5 29 283-311 243-271 (273)
48 cd05058 PTKc_Met_Ron Catalytic 52.3 12 0.00026 33.7 2.7 29 283-311 230-258 (262)
49 cd05070 PTKc_Fyn_Yrk Catalytic 52.0 13 0.00028 33.5 2.8 29 283-311 231-259 (260)
50 cd05083 PTKc_Chk Catalytic dom 51.7 12 0.00026 33.5 2.7 28 284-311 226-253 (254)
51 cd05043 PTK_Ryk Pseudokinase d 51.5 12 0.00026 34.2 2.6 28 284-311 248-275 (280)
52 cd05069 PTKc_Yes Catalytic dom 51.1 14 0.0003 33.4 2.9 28 284-311 232-259 (260)
53 cd05074 PTKc_Tyro3 Catalytic d 51.0 12 0.00026 33.9 2.5 29 283-311 243-271 (273)
54 cd05073 PTKc_Hck Catalytic dom 50.9 14 0.0003 33.4 2.9 28 284-311 232-259 (260)
55 cd05106 PTKc_CSF-1R Catalytic 50.3 12 0.00026 36.4 2.6 28 284-311 344-371 (374)
56 cd05040 PTKc_Ack_like Catalyti 50.3 14 0.00031 33.1 2.9 28 283-310 229-256 (257)
57 cd05044 PTKc_c-ros Catalytic d 50.2 15 0.00033 33.1 3.1 27 284-310 242-268 (269)
58 cd05064 PTKc_EphR_A10 Catalyti 49.9 14 0.0003 33.6 2.7 28 284-311 237-264 (266)
59 cd05103 PTKc_VEGFR2 Catalytic 49.6 12 0.00026 35.7 2.4 29 283-311 310-338 (343)
60 cd05071 PTKc_Src Catalytic dom 49.4 16 0.00034 33.1 3.0 29 283-311 231-259 (262)
61 cd05067 PTKc_Lck_Blk Catalytic 48.7 15 0.00032 33.1 2.7 29 283-311 231-259 (260)
62 cd05036 PTKc_ALK_LTK Catalytic 48.4 15 0.00033 33.5 2.8 28 283-310 249-276 (277)
63 cd08228 STKc_Nek6 Catalytic do 48.1 15 0.00032 33.1 2.6 28 284-311 237-264 (267)
64 cd05089 PTKc_Tie1 Catalytic do 47.6 15 0.00032 34.1 2.5 28 283-310 246-273 (297)
65 cd05041 PTKc_Fes_like Catalyti 47.4 16 0.00035 32.5 2.7 28 283-310 223-250 (251)
66 cd05082 PTKc_Csk Catalytic dom 46.9 16 0.00034 32.8 2.6 28 283-310 227-254 (256)
67 cd05093 PTKc_TrkB Catalytic do 46.8 15 0.00033 33.8 2.5 28 284-311 251-278 (288)
68 cd05076 PTK_Tyk2_rpt1 Pseudoki 46.4 15 0.00033 33.6 2.4 27 284-310 248-274 (274)
69 cd00192 PTKc Catalytic domain 46.3 17 0.00036 32.3 2.6 28 283-310 235-262 (262)
70 cd05032 PTKc_InsR_like Catalyt 46.0 17 0.00038 32.9 2.8 27 284-310 250-276 (277)
71 cd05039 PTKc_Csk_like Catalyti 45.5 18 0.00039 32.4 2.8 29 283-311 227-255 (256)
72 cd05111 PTK_HER3 Pseudokinase 45.2 19 0.00041 33.0 2.9 28 284-311 240-267 (279)
73 cd05092 PTKc_TrkA Catalytic do 45.2 18 0.00038 33.2 2.7 27 284-310 253-279 (280)
74 cd05105 PTKc_PDGFR_alpha Catal 44.7 14 0.00031 36.4 2.1 28 284-311 369-396 (400)
75 cd05049 PTKc_Trk Catalytic dom 44.2 20 0.00043 32.6 2.8 27 284-310 253-279 (280)
76 cd05090 PTKc_Ror1 Catalytic do 43.1 21 0.00046 32.6 2.9 27 284-310 255-281 (283)
77 cd05088 PTKc_Tie2 Catalytic do 43.0 18 0.0004 33.6 2.5 27 284-310 252-278 (303)
78 cd05061 PTKc_InsR Catalytic do 43.0 18 0.00039 33.3 2.4 30 283-312 249-278 (288)
79 cd05101 PTKc_FGFR2 Catalytic d 42.9 20 0.00043 33.3 2.7 28 284-311 268-295 (304)
80 cd05047 PTKc_Tie Catalytic dom 42.6 19 0.00042 32.7 2.5 28 284-311 240-267 (270)
81 cd05098 PTKc_FGFR1 Catalytic d 41.8 21 0.00046 33.2 2.7 29 283-311 270-298 (307)
82 cd08217 STKc_Nek2 Catalytic do 41.6 18 0.00039 32.3 2.1 25 284-308 238-262 (265)
83 cd05079 PTKc_Jak1_rpt2 Catalyt 41.5 23 0.00049 32.5 2.8 30 282-311 253-282 (284)
84 cd05110 PTKc_HER4 Catalytic do 41.1 22 0.00047 33.1 2.6 27 284-310 240-266 (303)
85 cd08529 STKc_FA2-like Catalyti 41.0 20 0.00043 31.9 2.3 25 283-307 228-252 (256)
86 cd05108 PTKc_EGFR Catalytic do 40.0 22 0.00048 33.2 2.5 27 284-310 240-266 (316)
87 cd06642 STKc_STK25-YSK1 Cataly 39.6 23 0.0005 32.2 2.5 25 284-308 229-253 (277)
88 cd05037 PTK_Jak_rpt1 Pseudokin 39.4 23 0.00049 31.6 2.4 27 284-310 233-259 (259)
89 cd05034 PTKc_Src_like Catalyti 38.0 29 0.00063 31.0 2.9 28 284-311 233-260 (261)
90 cd05077 PTK_Jak1_rpt1 Pseudoki 37.7 23 0.00049 32.1 2.1 25 285-309 237-261 (262)
91 cd05086 PTKc_Aatyk2 Catalytic 37.4 28 0.00061 31.6 2.7 24 286-310 244-267 (268)
92 smart00220 S_TKc Serine/Threon 36.8 25 0.00055 30.5 2.3 26 282-307 215-240 (244)
93 cd07841 STKc_CDK7 Catalytic do 36.4 37 0.0008 31.2 3.4 27 282-308 256-282 (298)
94 smart00750 KIND kinase non-cat 36.1 32 0.0007 28.8 2.7 27 284-310 141-167 (176)
95 cd05055 PTKc_PDGFR Catalytic d 35.6 31 0.00067 32.1 2.7 27 284-310 273-299 (302)
96 KOG0196 Tyrosine kinase, EPH ( 35.2 24 0.00052 38.0 2.0 27 284-310 863-889 (996)
97 cd05107 PTKc_PDGFR_beta Cataly 34.4 28 0.0006 34.4 2.3 28 284-311 371-398 (401)
98 cd06621 PKc_MAPKK_Pek1_like Ca 33.9 31 0.00068 31.6 2.4 24 284-307 242-265 (287)
99 cd08218 STKc_Nek1 Catalytic do 33.9 28 0.0006 31.1 2.1 24 284-307 229-252 (256)
100 KOG0192 Tyrosine kinase specif 33.5 38 0.00082 33.2 3.0 27 284-310 275-301 (362)
101 smart00219 TyrKc Tyrosine kina 33.5 29 0.00063 30.7 2.1 26 284-309 233-258 (258)
102 cd07846 STKc_CDKL2_3 Catalytic 33.3 28 0.00062 31.6 2.1 26 281-306 256-281 (286)
103 cd05046 PTK_CCK4 Pseudokinase 33.1 37 0.00079 30.7 2.7 28 283-310 247-274 (275)
104 cd05100 PTKc_FGFR3 Catalytic d 32.9 36 0.00077 32.2 2.7 28 284-311 265-292 (334)
105 cd05087 PTKc_Aatyk1_Aatyk3 Cat 32.6 36 0.00078 30.7 2.6 24 286-310 245-268 (269)
106 cd05115 PTKc_Zap-70 Catalytic 30.9 39 0.00085 30.4 2.5 28 284-311 227-254 (257)
107 PF08105 Antimicrobial10: Metc 30.5 56 0.0012 22.2 2.5 26 1-26 1-26 (52)
108 cd06612 STKc_MST1_2 Catalytic 30.5 33 0.00071 30.5 1.9 24 284-307 229-252 (256)
109 cd05056 PTKc_FAK Catalytic dom 30.0 42 0.00092 30.2 2.6 29 283-311 236-264 (270)
110 cd05042 PTKc_Aatyk Catalytic d 29.7 45 0.00097 30.1 2.7 23 287-310 246-268 (269)
111 cd08220 STKc_Nek8 Catalytic do 29.7 35 0.00076 30.3 2.0 24 284-307 229-252 (256)
112 cd06620 PKc_MAPKK_Byr1_like Ca 29.5 32 0.00069 31.5 1.7 26 284-309 242-267 (284)
113 cd05099 PTKc_FGFR4 Catalytic d 29.5 46 0.001 31.0 2.8 28 284-311 265-292 (314)
114 cd07830 STKc_MAK_like Catalyti 28.3 44 0.00094 30.3 2.4 25 283-307 255-279 (283)
115 cd05109 PTKc_HER2 Catalytic do 28.3 46 0.001 30.2 2.6 28 284-311 240-267 (279)
116 cd08223 STKc_Nek4 Catalytic do 28.2 43 0.00093 29.8 2.3 24 284-307 230-253 (257)
117 cd07833 STKc_CDKL Catalytic do 27.1 34 0.00074 31.0 1.5 25 283-307 260-284 (288)
118 cd06606 STKc_MAPKKK Catalytic 26.3 48 0.001 29.1 2.2 25 283-307 232-256 (260)
119 cd06615 PKc_MEK Catalytic doma 25.7 43 0.00092 31.2 1.9 25 284-308 263-287 (308)
120 cd07835 STKc_CDK1_like Catalyt 25.2 45 0.00097 30.3 1.9 25 283-307 255-279 (283)
121 cd05118 STKc_CMGC Catalytic do 24.7 56 0.0012 29.5 2.4 24 284-307 256-279 (283)
122 cd06632 STKc_MEKK1_plant Catal 24.5 50 0.0011 29.3 2.0 24 284-307 231-254 (258)
123 cd06626 STKc_MEKK4 Catalytic d 24.3 53 0.0012 29.2 2.2 23 284-306 237-259 (264)
124 cd06641 STKc_MST3 Catalytic do 24.2 54 0.0012 29.7 2.2 26 283-308 228-253 (277)
125 cd06640 STKc_MST4 Catalytic do 24.1 57 0.0012 29.6 2.3 25 283-307 228-252 (277)
126 cd07840 STKc_CDK9_like Catalyt 24.1 53 0.0012 29.6 2.1 26 282-307 258-283 (287)
127 cd08216 PK_STRAD Pseudokinase 23.8 56 0.0012 30.2 2.3 24 284-307 271-294 (314)
128 cd06624 STKc_ASK Catalytic dom 23.8 58 0.0013 29.3 2.3 24 284-307 241-264 (268)
129 cd06639 STKc_myosinIIIB Cataly 23.3 53 0.0011 30.0 2.0 24 284-307 263-286 (291)
130 cd06638 STKc_myosinIIIA Cataly 23.1 64 0.0014 29.3 2.5 24 284-307 259-282 (286)
131 cd08219 STKc_Nek3 Catalytic do 22.9 65 0.0014 28.7 2.4 24 284-307 228-251 (255)
132 cd08221 STKc_Nek9 Catalytic do 22.9 55 0.0012 29.1 1.9 25 284-308 229-253 (256)
133 cd08225 STKc_Nek5 Catalytic do 22.9 56 0.0012 29.0 2.0 25 283-307 229-253 (257)
134 cd07847 STKc_CDKL1_4 Catalytic 22.7 59 0.0013 29.4 2.1 27 281-307 256-282 (286)
135 cd06637 STKc_TNIK Catalytic do 22.5 59 0.0013 29.2 2.1 24 284-307 245-268 (272)
136 cd06608 STKc_myosinIII_like Ca 22.4 58 0.0012 29.1 2.0 24 284-307 248-271 (275)
137 KOG0194 Protein tyrosine kinas 22.1 54 0.0012 33.4 1.8 25 286-310 394-418 (474)
138 cd06651 STKc_MEKK3 Catalytic d 22.1 54 0.0012 29.5 1.8 19 288-306 241-259 (266)
139 cd06610 STKc_OSR1_SPAK Catalyt 21.8 62 0.0013 28.8 2.1 25 283-307 239-263 (267)
140 cd07842 STKc_CDK8_like Catalyt 21.1 64 0.0014 29.7 2.1 25 283-307 288-312 (316)
141 cd06613 STKc_MAP4K3_like Catal 20.8 51 0.0011 29.3 1.3 24 284-307 236-259 (262)
142 cd06649 PKc_MEK2 Catalytic dom 20.8 69 0.0015 30.2 2.2 25 284-308 277-301 (331)
143 cd06629 STKc_MAPKKK_Bck1_like 20.5 71 0.0015 28.7 2.2 25 283-307 244-268 (272)
144 cd07860 STKc_CDK2_3 Catalytic 20.4 63 0.0014 29.3 1.8 22 285-306 258-279 (284)
145 PF12273 RCR: Chitin synthesis 20.2 59 0.0013 26.7 1.4 6 4-9 2-7 (130)
No 1
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function. The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.
Probab=99.91 E-value=2e-24 Score=174.37 Aligned_cols=103 Identities=44% Similarity=0.877 Sum_probs=77.9
Q ss_pred cccCC-C-Cccc-CCCcHHHHHHHHHHHHHHHhccCCCCCCCCCCeeeeecCCCCCeEEEEEecCCCCChhhHHHHHHHH
Q 046163 30 GYYCS-D-GMNF-TSNSTYQSNLKLLLSTLRSSATHGSSDKFSDGFYNATAGQDPDKVYGLFLCRGDVSRETCQDCVNFA 106 (357)
Q Consensus 30 ~~~C~-~-~~~~-~~~s~f~~nl~~ll~~L~~~a~~~~~~~~~~~f~~~~~g~~~~~vYgl~qC~~Dls~~~C~~Cl~~a 106 (357)
++.|+ + .++| +.+++|+++|+.||..|..+++... + .+|+++..|.++++||||+||++|+++.+|..||+.+
T Consensus 1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~--~--~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a 76 (106)
T PF01657_consen 1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSS--S--KGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADA 76 (106)
T ss_dssp ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-----TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHH
T ss_pred CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhcc--c--cCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHH
Confidence 35788 3 4567 5677799999999999999987542 1 5799998887889999999999999999999999999
Q ss_pred HHHHhhhCCCCcceEEEcceeEEEEecccc
Q 046163 107 ISELSKFCPVQKIAVIWYQECLLHYSNYSF 136 (357)
Q Consensus 107 ~~~~~~~C~~~~~a~i~~~~C~lRYs~~~F 136 (357)
+..++.+|+.++||+||+++|+||||+++|
T Consensus 77 ~~~~~~~C~~~~g~~v~~~~C~lRY~~~~F 106 (106)
T PF01657_consen 77 VANISSCCPGSRGGRVWYDSCFLRYENYPF 106 (106)
T ss_dssp HCCHHHHTTSBSSEEEEESSEEEEEESS--
T ss_pred HHHHHHhCCCCceEEEECCCEEEEEECCCC
Confidence 999999999999999999999999999998
No 2
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function. The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.
Probab=99.89 E-value=4.9e-23 Score=166.21 Aligned_cols=90 Identities=40% Similarity=0.820 Sum_probs=74.7
Q ss_pred CchhhhHHHHHHHHHHHHhhcC-CCceeeeeccCCCCCceEEEEeecCCCChhhHHHHHHHHHHHhhccCCCCcceEEEc
Q 046163 156 NRSFDGGVSNLMNEALSRALRT-PKMFGTAKKDYSDSPTLYGLAQCTQDLSPDQCRSCLGEAISKLAGCCSIRQGGQVLY 234 (357)
Q Consensus 156 ~~~f~~~~~~ll~~l~~~a~~~-~~~fa~~~~~~~~~~~vYglaQC~~DLs~~dC~~CL~~a~~~~~~~c~~~~gg~i~~ 234 (357)
...|++++.+||..|...++.+ +.+|++++... +.++||||+||++||++.||+.||+.++..++++|+.++||+|++
T Consensus 16 ~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~-~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~~~g~~v~~ 94 (106)
T PF01657_consen 16 NSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGS-GPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPGSRGGRVWY 94 (106)
T ss_dssp T-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--S-T---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTSBSSEEEEE
T ss_pred CchHHHHHHHHHHHHHHHHhhccccCcEEeecCC-CCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCCCceEEEEC
Confidence 5569999999999999998765 47999998633 678999999999999999999999999999999999999999999
Q ss_pred CCeeEEEecccc
Q 046163 235 PSCITRYELSQF 246 (357)
Q Consensus 235 ~~C~lRye~~~F 246 (357)
++|+||||+|+|
T Consensus 95 ~~C~lRY~~~~F 106 (106)
T PF01657_consen 95 DSCFLRYENYPF 106 (106)
T ss_dssp SSEEEEEESS--
T ss_pred CCEEEEEECCCC
Confidence 999999999998
No 3
>PF11883 DUF3403: Domain of unknown function (DUF3403); InterPro: IPR021820 This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins. ; GO: 0004674 protein serine/threonine kinase activity
Probab=97.45 E-value=0.00019 Score=48.92 Aligned_cols=44 Identities=50% Similarity=0.757 Sum_probs=34.8
Q ss_pred CCCCCCCCCCCcccccccccCCCCCCCCC--ccccccceEEeeeccC
Q 046163 313 TVPLPQPSQPAFSAGRSIARSGQSSSSDS--KICSVNEVTLSDVSPR 357 (357)
Q Consensus 313 ~~~~~~p~~~~f~~~~~~~~~~~~~~~~~--~~~s~~~~t~s~~~~r 357 (357)
...+|.|++|+|...+...+... +..+. ..+++|++|+|.+++|
T Consensus 3 ~~~LP~PKqPgF~~~r~~~e~~s-Sss~~~~~~~SvNevTiT~l~~R 48 (48)
T PF11883_consen 3 TATLPQPKQPGFFTGRSPSETDS-SSSKQRDESCSVNEVTITMLEAR 48 (48)
T ss_pred cccCCCCCCCCEEeEcCCCCcCC-CcccccCCCCCeeeEEEEeEecC
Confidence 35689999999999988766543 22333 6789999999999998
No 4
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.97 E-value=0.12 Score=50.60 Aligned_cols=28 Identities=32% Similarity=0.442 Sum_probs=25.5
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
++.+++.|++.++.+||+|.+|+++|+.
T Consensus 324 ~~~~a~~C~~~~~~~RP~m~~Vv~~L~~ 351 (361)
T KOG1187|consen 324 LAELALRCLRPDPKERPTMSQVVKELEG 351 (361)
T ss_pred HHHHHHHHcCcCCCcCcCHHHHHHHHHh
Confidence 5678999999999999999999999954
No 5
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=75.91 E-value=2.2 Score=38.99 Aligned_cols=29 Identities=17% Similarity=0.402 Sum_probs=25.4
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
-+..++..|.+.+|.+||+|.+++.+|+.
T Consensus 254 ~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05038 254 EVYDLMKLCWEAEPQDRPSFADLILIVDR 282 (284)
T ss_pred HHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence 35567889999999999999999999974
No 6
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=73.83 E-value=2.7 Score=37.99 Aligned_cols=29 Identities=17% Similarity=0.216 Sum_probs=25.3
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
-+..++..|.+.+|.+||+|.+|+.+|++
T Consensus 226 ~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 226 EMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 34567789999999999999999999975
No 7
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=73.77 E-value=2.9 Score=37.88 Aligned_cols=30 Identities=27% Similarity=0.365 Sum_probs=25.8
Q ss_pred chhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 282 TTIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 282 ~~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
..+..++..|++.+|.+||+|.+++..|+.
T Consensus 231 ~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 231 KELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 345677889999999999999999999874
No 8
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=71.37 E-value=3.7 Score=37.30 Aligned_cols=27 Identities=22% Similarity=0.374 Sum_probs=23.7
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++..|.+.+|.+||+|.+|..+|+
T Consensus 242 l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 242 VTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 456677899999999999999999985
No 9
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=70.51 E-value=3.5 Score=38.01 Aligned_cols=28 Identities=25% Similarity=0.379 Sum_probs=24.8
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
-+..++..|.+.+|.+||+|.++++.|+
T Consensus 268 ~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 268 DIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 3567888999999999999999999885
No 10
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=70.48 E-value=3.5 Score=38.26 Aligned_cols=28 Identities=18% Similarity=0.306 Sum_probs=25.0
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
.+..++..|.+.+|.+||+|.+|+++|.
T Consensus 267 ~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 267 PVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 4667889999999999999999999885
No 11
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=69.95 E-value=3.9 Score=37.07 Aligned_cols=29 Identities=21% Similarity=0.346 Sum_probs=25.2
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++..|++.+|.+||+|.+|+.+|+.
T Consensus 238 ~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 238 AVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 45577889999999999999999999863
No 12
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=69.83 E-value=4 Score=37.87 Aligned_cols=28 Identities=14% Similarity=0.301 Sum_probs=24.4
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
.+..++..|.+.+|.+||+|.+++..|+
T Consensus 268 ~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 268 SLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 3456888999999999999999998875
No 13
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=69.25 E-value=3.8 Score=36.96 Aligned_cols=27 Identities=15% Similarity=0.263 Sum_probs=23.4
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++..|.+.+|.+||+|.+++.+|.
T Consensus 230 ~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 230 VYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 456778899999999999999998873
No 14
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=68.48 E-value=4.2 Score=36.66 Aligned_cols=29 Identities=24% Similarity=0.382 Sum_probs=25.3
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++..|.+.+|.+||++.++++.|++
T Consensus 232 ~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 232 EIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 45567789999999999999999999874
No 15
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=67.87 E-value=3.7 Score=45.28 Aligned_cols=29 Identities=28% Similarity=0.370 Sum_probs=25.2
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhCC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLASD 312 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~~ 312 (357)
+..++..|++.+|.+||+|.+|+++|+..
T Consensus 923 ~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 923 VMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred HHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 44677899999999999999999999753
No 16
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=67.47 E-value=4.5 Score=37.68 Aligned_cols=28 Identities=21% Similarity=0.342 Sum_probs=24.5
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
.+..++..|++.+|.+||+|.+++.+|+
T Consensus 276 ~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 276 GLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 3556778999999999999999999886
No 17
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=66.96 E-value=4.8 Score=37.14 Aligned_cols=29 Identities=17% Similarity=0.361 Sum_probs=25.2
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++..|.+.+|.+||+|.+++.+|+.
T Consensus 257 ~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~ 285 (290)
T cd05045 257 EMYNLMLTCWKQEPDKRPTFADISKELEK 285 (290)
T ss_pred HHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 45577889999999999999999999863
No 18
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=66.69 E-value=5 Score=36.39 Aligned_cols=29 Identities=14% Similarity=0.284 Sum_probs=24.8
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++.-|.+.+|.+||+|.++.++|+.
T Consensus 233 ~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 233 KVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred HHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 35567788999999999999999999874
No 19
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=66.62 E-value=4.8 Score=36.49 Aligned_cols=29 Identities=21% Similarity=0.323 Sum_probs=25.1
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++..|++.+|.+||+|.+++.+|+.
T Consensus 236 ~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 236 ALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 35577889999999999999999999863
No 20
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=65.96 E-value=4.7 Score=36.19 Aligned_cols=28 Identities=29% Similarity=0.349 Sum_probs=24.2
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
.+..++..|.+.+|.+||+|.+|+++|.
T Consensus 229 ~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 229 SVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 3556889999999999999999998873
No 21
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=65.63 E-value=4.7 Score=37.29 Aligned_cols=28 Identities=18% Similarity=0.248 Sum_probs=24.7
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++..|++.+|.+||+|.+|+++|+.
T Consensus 254 ~~~li~~~l~~~P~~Rpt~~~v~~~l~~ 281 (291)
T cd05094 254 VYDIMLGCWQREPQQRLNIKEIYKILHA 281 (291)
T ss_pred HHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence 4567788999999999999999999964
No 22
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=64.34 E-value=4.7 Score=39.24 Aligned_cols=28 Identities=14% Similarity=0.267 Sum_probs=24.8
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++..|.+.+|.+||+|.+++++|+.
T Consensus 346 l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 346 MYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 4467789999999999999999999974
No 23
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=64.17 E-value=5.1 Score=38.00 Aligned_cols=29 Identities=28% Similarity=0.450 Sum_probs=25.1
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++..|.+.+|.+||++.+++++|+.
T Consensus 305 ~l~~li~~cl~~dp~~RPs~~el~~~l~~ 333 (338)
T cd05102 305 EIYRIMLACWQGDPKERPTFSALVEILGD 333 (338)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 35567788999999999999999999974
No 24
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=63.86 E-value=5.7 Score=36.31 Aligned_cols=29 Identities=24% Similarity=0.324 Sum_probs=24.8
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
-+..++..|++.+|.+||++.+++..|+.
T Consensus 254 ~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 254 RVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 35567788999999999999999999863
No 25
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=62.39 E-value=6.1 Score=36.10 Aligned_cols=27 Identities=11% Similarity=0.192 Sum_probs=24.0
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++..|.+.+|.+||++.+++.+|+
T Consensus 250 ~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 250 LFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 456778999999999999999999886
No 26
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=62.20 E-value=6.4 Score=36.08 Aligned_cols=29 Identities=24% Similarity=0.380 Sum_probs=25.2
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
-+..++..|++.+|.+||++.+++.+|+.
T Consensus 254 ~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05081 254 EIYAIMKECWNNDPSQRPSFSELALQVEA 282 (284)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence 35567889999999999999999999863
No 27
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=61.44 E-value=7.1 Score=35.18 Aligned_cols=29 Identities=14% Similarity=0.199 Sum_probs=24.8
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
-+..++.-|...+|.+||++.+++++|+.
T Consensus 232 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 232 ELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 35567788999999999999999999863
No 28
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=61.36 E-value=6.7 Score=35.95 Aligned_cols=28 Identities=14% Similarity=0.203 Sum_probs=24.1
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++.-|.+.+|.+||+|.+++.+|+.
T Consensus 253 ~~~li~~cl~~~p~~Rps~~~i~~~l~~ 280 (283)
T cd05080 253 VYILMKNCWETEAKFRPTFRSLIPILKE 280 (283)
T ss_pred HHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 4457788999999999999999999863
No 29
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=60.93 E-value=7.6 Score=35.72 Aligned_cols=28 Identities=25% Similarity=0.411 Sum_probs=24.5
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
-+..++.+|.+.+|.+||++.+++..|+
T Consensus 260 ~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 260 ELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred HHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 3556789999999999999999998886
No 30
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=60.06 E-value=6.7 Score=37.50 Aligned_cols=29 Identities=28% Similarity=0.422 Sum_probs=25.2
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
-+..+++.|.+.+|.+||++.+++++|+.
T Consensus 304 ~~~~l~~~cl~~~p~~RPs~~ell~~l~~ 332 (337)
T cd05054 304 EIYSIMLDCWHNNPEDRPTFSELVEILGD 332 (337)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 35667889999999999999999999864
No 31
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=59.88 E-value=5.2 Score=36.42 Aligned_cols=26 Identities=27% Similarity=0.361 Sum_probs=19.3
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVML 309 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL 309 (357)
+..++..|+..+|.+||+|.++++.|
T Consensus 234 ~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 234 IYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 44567889999999999999998875
No 32
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=59.10 E-value=8.7 Score=34.69 Aligned_cols=27 Identities=19% Similarity=0.352 Sum_probs=23.0
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++.-|.+.+|.+||+|.+|+++++
T Consensus 237 ~~~li~~~l~~~p~~Rpt~~~i~~~~~ 263 (267)
T cd08229 237 LRQLVNMCINPDPEKRPDITYVYDVAK 263 (267)
T ss_pred HHHHHHHhcCCCcccCCCHHHHHHHHh
Confidence 445667799999999999999999885
No 33
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=58.50 E-value=7.6 Score=35.24 Aligned_cols=28 Identities=18% Similarity=0.298 Sum_probs=24.0
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++.-|++.+|.+||+|.+++.+|+.
T Consensus 240 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 240 LHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 4456778999999999999999999864
No 34
>PHA02988 hypothetical protein; Provisional
Probab=57.02 E-value=8.6 Score=35.61 Aligned_cols=27 Identities=22% Similarity=0.375 Sum_probs=23.2
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+-.++--|.+.+|.+||++.+++..|+
T Consensus 251 l~~li~~cl~~dp~~Rps~~ell~~l~ 277 (283)
T PHA02988 251 IKCIVEACTSHDSIKRPNIKEILYNLS 277 (283)
T ss_pred HHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 345667899999999999999999886
No 35
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=56.90 E-value=8.7 Score=34.60 Aligned_cols=27 Identities=22% Similarity=0.341 Sum_probs=23.6
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHH
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVML 309 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL 309 (357)
-+..++..|+..+|.+||+|.+++.+|
T Consensus 229 ~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 229 EVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 355678889999999999999999886
No 36
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=56.49 E-value=8.6 Score=34.43 Aligned_cols=27 Identities=26% Similarity=0.304 Sum_probs=23.3
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++.-|.+.+|.+||++.++.++|.
T Consensus 225 ~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 445667899999999999999999885
No 37
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=56.11 E-value=9.7 Score=34.53 Aligned_cols=29 Identities=17% Similarity=0.362 Sum_probs=24.8
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++.-|.+.+|.+||+|.+++++|+.
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 237 ALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred HHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 34567788999999999999999999863
No 38
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=55.17 E-value=11 Score=33.88 Aligned_cols=29 Identities=21% Similarity=0.290 Sum_probs=24.8
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++..|...+|.+||++.+++++|..
T Consensus 236 ~~~~~i~~cl~~~p~~Rp~~~~il~~~~~ 264 (267)
T cd08224 236 ELRDLVSRCINPDPEKRPDISYVLQVAKE 264 (267)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHHHHH
Confidence 34567788999999999999999999864
No 39
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=54.84 E-value=10 Score=34.27 Aligned_cols=28 Identities=11% Similarity=0.215 Sum_probs=23.6
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
.+..++..|.+.+|.+||++.+++..|+
T Consensus 229 ~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 229 KVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 3556778899999999999999998764
No 40
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=54.65 E-value=4.2 Score=39.82 Aligned_cols=39 Identities=15% Similarity=0.191 Sum_probs=32.3
Q ss_pred CCCCCCCcccccccccCCCCCCCCCccccccceEEeeec
Q 046163 317 PQPSQPAFSAGRSIARSGQSSSSDSKICSVNEVTLSDVS 355 (357)
Q Consensus 317 ~~p~~~~f~~~~~~~~~~~~~~~~~~~~s~~~~t~s~~~ 355 (357)
...+|++|+..+.+|+|+||.+|++.......+.++.++
T Consensus 70 l~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~ 108 (361)
T KOG1187|consen 70 LRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLS 108 (361)
T ss_pred HHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEec
Confidence 367889999999999999999998777666667777654
No 41
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=54.59 E-value=9 Score=34.59 Aligned_cols=26 Identities=19% Similarity=0.180 Sum_probs=22.0
Q ss_pred hhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 285 PLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 285 ~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
..++.-|.+.+|.+||++.++++.|+
T Consensus 233 ~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 233 ANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHHHhccChhhCCCHHHHHHhcC
Confidence 35566799999999999999998874
No 42
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=54.33 E-value=9.3 Score=34.39 Aligned_cols=28 Identities=25% Similarity=0.319 Sum_probs=24.4
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+-.++..|...+|.+||++.+++.+|+.
T Consensus 227 l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 227 IYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred HHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 3457788999999999999999999975
No 43
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=54.00 E-value=11 Score=34.05 Aligned_cols=28 Identities=18% Similarity=0.329 Sum_probs=24.3
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++..|.+.+|.+||++.+++..|+.
T Consensus 243 ~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 243 LYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 4567788999999999999999998864
No 44
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=53.52 E-value=11 Score=34.59 Aligned_cols=29 Identities=17% Similarity=0.188 Sum_probs=24.9
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
-+..++.-|.+.+|.+||++.+++..|+.
T Consensus 262 ~~~~li~~~l~~~p~~Rps~~eil~~l~~ 290 (293)
T cd05053 262 ELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290 (293)
T ss_pred HHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence 35567888999999999999999998864
No 45
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=52.99 E-value=12 Score=34.12 Aligned_cols=27 Identities=22% Similarity=0.300 Sum_probs=23.6
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++.-|.+.+|.+||++.+++..|+
T Consensus 255 ~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 255 VYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 556778899999999999999998875
No 46
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=52.68 E-value=13 Score=33.24 Aligned_cols=28 Identities=21% Similarity=0.234 Sum_probs=23.9
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
-+..++.-|.+.+|.+||+|.++++.|.
T Consensus 222 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 222 DVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 3556778899999999999999998875
No 47
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=52.44 E-value=11 Score=33.98 Aligned_cols=29 Identities=21% Similarity=0.359 Sum_probs=24.2
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++.-|.+.+|.+||++.+++..|+.
T Consensus 243 ~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 243 ELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 34556677999999999999999998864
No 48
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=52.33 E-value=12 Score=33.66 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=24.6
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++.-|.+.+|.+||++.+++..|+.
T Consensus 230 ~~~~li~~cl~~~p~~Rp~~~~il~~l~~ 258 (262)
T cd05058 230 PLYEVMLSCWHPKPEMRPTFSELVSRIEQ 258 (262)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 34567788999999999999999998864
No 49
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=51.97 E-value=13 Score=33.54 Aligned_cols=29 Identities=21% Similarity=0.437 Sum_probs=24.5
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++..|.+.+|.+||++.++...|+.
T Consensus 231 ~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 231 SLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 35567788999999999999999988863
No 50
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=51.73 E-value=12 Score=33.54 Aligned_cols=28 Identities=14% Similarity=0.295 Sum_probs=24.3
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++..|.+.+|.+||++.+++..|+.
T Consensus 226 ~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 226 VYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 4467788999999999999999999865
No 51
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=51.55 E-value=12 Score=34.15 Aligned_cols=28 Identities=21% Similarity=0.341 Sum_probs=24.4
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++..|++.+|++||++.+++.+|+.
T Consensus 248 ~~~li~~~l~~~p~~Rps~~~~~~~l~~ 275 (280)
T cd05043 248 LFAVMACCWALDPEERPSFSQLVQCLTD 275 (280)
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 4567788999999999999999999863
No 52
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=51.09 E-value=14 Score=33.35 Aligned_cols=28 Identities=21% Similarity=0.440 Sum_probs=23.6
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++..|.+.+|.+||++.+|++.|+.
T Consensus 232 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 232 LHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 4456678999999999999999999863
No 53
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=50.96 E-value=12 Score=33.92 Aligned_cols=29 Identities=14% Similarity=0.168 Sum_probs=25.3
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++..|.+.+|.+||++.++...|++
T Consensus 243 ~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 243 DVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 45667889999999999999999998864
No 54
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=50.90 E-value=14 Score=33.36 Aligned_cols=28 Identities=14% Similarity=0.324 Sum_probs=24.1
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++..|.+.+|++||++.++..+|+.
T Consensus 232 ~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 232 LYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 4456788999999999999999999863
No 55
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=50.33 E-value=12 Score=36.37 Aligned_cols=28 Identities=18% Similarity=0.394 Sum_probs=24.1
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++..|.+.+|.+||++.+++++|+.
T Consensus 344 l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 344 IYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 4456678999999999999999999863
No 56
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=50.32 E-value=14 Score=33.05 Aligned_cols=28 Identities=29% Similarity=0.463 Sum_probs=23.7
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
.+..++..|.+.+|.+||++.+++..|.
T Consensus 229 ~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 229 DIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 3456778899999999999999998774
No 57
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=50.24 E-value=15 Score=33.07 Aligned_cols=27 Identities=22% Similarity=0.447 Sum_probs=23.6
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++..|.+.+|.+||+|.++.++|+
T Consensus 242 ~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 242 IYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 446777899999999999999999885
No 58
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=49.90 E-value=14 Score=33.59 Aligned_cols=28 Identities=18% Similarity=0.377 Sum_probs=23.6
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++.-|.+.+|.+||+|.++.+.|+.
T Consensus 237 ~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 237 LHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred HHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 4456677999999999999999998864
No 59
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=49.64 E-value=12 Score=35.68 Aligned_cols=29 Identities=21% Similarity=0.290 Sum_probs=24.7
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..+++.|.+.+|.+||++.+++..|+.
T Consensus 310 ~~~~~~~~cl~~~p~~Rps~~eil~~l~~ 338 (343)
T cd05103 310 EMYQTMLDCWHGEPSQRPTFSELVEHLGN 338 (343)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 35567788999999999999999998863
No 60
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=49.36 E-value=16 Score=33.14 Aligned_cols=29 Identities=14% Similarity=0.346 Sum_probs=25.0
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++.-|.+.+|.+||++.++..+|+.
T Consensus 231 ~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 231 SLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred HHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 35567788999999999999999999874
No 61
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=48.67 E-value=15 Score=33.09 Aligned_cols=29 Identities=21% Similarity=0.363 Sum_probs=24.6
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
-+..++..|...+|.+||++.+++.+|+.
T Consensus 231 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 231 ELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 35567788999999999999999999863
No 62
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=48.41 E-value=15 Score=33.48 Aligned_cols=28 Identities=18% Similarity=0.301 Sum_probs=23.7
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
.+..++..|++.+|.+||++.+|++.|.
T Consensus 249 ~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 249 PVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 3456778899999999999999998774
No 63
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=48.11 E-value=15 Score=33.13 Aligned_cols=28 Identities=18% Similarity=0.383 Sum_probs=23.8
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++..|.+.+|.+||++.+|++.|.+
T Consensus 237 ~~~li~~cl~~~p~~Rp~~~~vl~~~~~ 264 (267)
T cd08228 237 LRELVSMCIYPDPDQRPDIGYVHQIAKQ 264 (267)
T ss_pred HHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence 4456678999999999999999999864
No 64
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=47.58 E-value=15 Score=34.11 Aligned_cols=28 Identities=18% Similarity=0.346 Sum_probs=23.9
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
.+..++.-|++.+|.+||++.++++.|+
T Consensus 246 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 273 (297)
T cd05089 246 EVYELMRQCWRDRPYERPPFAQISVQLS 273 (297)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 3456778899999999999999988875
No 65
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=47.42 E-value=16 Score=32.54 Aligned_cols=28 Identities=29% Similarity=0.380 Sum_probs=23.6
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
.+..++.-|.+.+|.+||++.+++..|.
T Consensus 223 ~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 223 EIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 3455777899999999999999998875
No 66
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=46.86 E-value=16 Score=32.84 Aligned_cols=28 Identities=18% Similarity=0.114 Sum_probs=23.8
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
.+..++.-|.+.+|.+||++.+++..|+
T Consensus 227 ~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 254 (256)
T cd05082 227 VVYDVMKQCWHLDAATRPSFLQLREQLE 254 (256)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHHh
Confidence 3445677899999999999999999886
No 67
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=46.77 E-value=15 Score=33.79 Aligned_cols=28 Identities=18% Similarity=0.240 Sum_probs=23.7
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++.-|.+.+|.+||++.+|...|+.
T Consensus 251 l~~li~~~l~~~p~~Rpt~~~v~~~l~~ 278 (288)
T cd05093 251 VYDLMLGCWQREPHMRLNIKEIHSLLQN 278 (288)
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 4567778999999999999999888753
No 68
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=46.37 E-value=15 Score=33.65 Aligned_cols=27 Identities=19% Similarity=0.356 Sum_probs=22.4
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++.-|.+.+|.+||+|.+++..|+
T Consensus 248 ~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 248 LATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 445667899999999999999988763
No 69
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=46.30 E-value=17 Score=32.34 Aligned_cols=28 Identities=29% Similarity=0.379 Sum_probs=23.4
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
-+..++..|++.+|.+||++.+++..|+
T Consensus 235 ~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 235 ELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 3456677899999999999999998874
No 70
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=46.02 E-value=17 Score=32.89 Aligned_cols=27 Identities=15% Similarity=0.231 Sum_probs=23.5
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++.-|.+.+|.+||++.+++.+|+
T Consensus 250 ~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 250 LLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 446677899999999999999999886
No 71
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=45.48 E-value=18 Score=32.35 Aligned_cols=29 Identities=24% Similarity=0.218 Sum_probs=24.2
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++..|...+|.+||++.++..+|+.
T Consensus 227 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 227 EVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 34456778999999999999999999863
No 72
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=45.22 E-value=19 Score=32.98 Aligned_cols=28 Identities=14% Similarity=0.225 Sum_probs=23.4
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++..|...+|.+||++.++..+|..
T Consensus 240 ~~~li~~c~~~~p~~Rps~~el~~~l~~ 267 (279)
T cd05111 240 VYMVMVKCWMIDENVRPTFKELANEFTR 267 (279)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 3456678999999999999999888854
No 73
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=45.19 E-value=18 Score=33.18 Aligned_cols=27 Identities=11% Similarity=0.119 Sum_probs=23.6
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+-.++..|.+.+|.+||++.++...|+
T Consensus 253 ~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 253 VYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 446778899999999999999999885
No 74
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=44.67 E-value=14 Score=36.42 Aligned_cols=28 Identities=14% Similarity=0.284 Sum_probs=24.6
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++..|.+.+|.+||++.+++++|+.
T Consensus 369 l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 369 VYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred HHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 4567788999999999999999999874
No 75
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=44.17 E-value=20 Score=32.57 Aligned_cols=27 Identities=22% Similarity=0.236 Sum_probs=23.3
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++.-|++.+|.+||++.+|.++|+
T Consensus 253 ~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 253 VYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 445677899999999999999999885
No 76
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=43.10 E-value=21 Score=32.59 Aligned_cols=27 Identities=19% Similarity=0.295 Sum_probs=23.1
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++..|.+.+|.+||++.++.++|.
T Consensus 255 ~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 255 MYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred HHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 445677899999999999999988875
No 77
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=42.98 E-value=18 Score=33.61 Aligned_cols=27 Identities=22% Similarity=0.338 Sum_probs=23.5
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++..|.+.+|.+||++.+++.+|+
T Consensus 252 ~~~li~~~l~~~p~~Rp~~~~il~~l~ 278 (303)
T cd05088 252 VYDLMRQCWREKPYERPSFAQILVSLN 278 (303)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 456778899999999999999998875
No 78
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=42.96 E-value=18 Score=33.26 Aligned_cols=30 Identities=17% Similarity=0.300 Sum_probs=25.7
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhCC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLASD 312 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~~ 312 (357)
.+-.++..|.+.+|.+||+|.++++.|...
T Consensus 249 ~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 249 RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 355678899999999999999999998754
No 79
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=42.90 E-value=20 Score=33.26 Aligned_cols=28 Identities=14% Similarity=0.187 Sum_probs=23.6
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++.-|.+.+|.+||+|.+++..|..
T Consensus 268 ~~~li~~cl~~~p~~Rps~~e~l~~l~~ 295 (304)
T cd05101 268 LYMMMRDCWHAIPSHRPTFKQLVEDLDR 295 (304)
T ss_pred HHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 4456677999999999999999999864
No 80
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=42.61 E-value=19 Score=32.65 Aligned_cols=28 Identities=21% Similarity=0.324 Sum_probs=23.9
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++.-|++.+|.+||++.+++..|+.
T Consensus 240 ~~~li~~~l~~~p~~Rps~~~il~~l~~ 267 (270)
T cd05047 240 VYDLMRQCWREKPYERPSFAQILVSLNR 267 (270)
T ss_pred HHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 4466778999999999999999998864
No 81
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=41.78 E-value=21 Score=33.18 Aligned_cols=29 Identities=14% Similarity=0.196 Sum_probs=24.2
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++.-|.+.+|.+||+|.+|+..|+.
T Consensus 270 ~~~~li~~~l~~~p~~Rps~~evl~~l~~ 298 (307)
T cd05098 270 ELYMMMRDCWHAVPSQRPTFKQLVEDLDR 298 (307)
T ss_pred HHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence 34456778999999999999999999863
No 82
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=41.58 E-value=18 Score=32.27 Aligned_cols=25 Identities=20% Similarity=0.292 Sum_probs=20.9
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVM 308 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~m 308 (357)
+..++..|++.+|.+||+|.+|+++
T Consensus 238 ~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 238 LNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHHHHccCCcccCCCHHHHhhC
Confidence 4467788999999999999998753
No 83
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=41.52 E-value=23 Score=32.47 Aligned_cols=30 Identities=7% Similarity=0.070 Sum_probs=25.1
Q ss_pred chhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 282 TTIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 282 ~~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.-+..++..|.+.+|.+||++.+++..|+.
T Consensus 253 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 253 EEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 345567788999999999999999988763
No 84
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=41.15 E-value=22 Score=33.11 Aligned_cols=27 Identities=15% Similarity=0.326 Sum_probs=23.2
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++.-|+..+|.+||+|.+++.+|.
T Consensus 240 ~~~li~~c~~~~p~~Rp~~~~l~~~l~ 266 (303)
T cd05110 240 VYMVMVKCWMIDADSRPKFKELAAEFS 266 (303)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 445677899999999999999999885
No 85
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=40.98 E-value=20 Score=31.92 Aligned_cols=25 Identities=16% Similarity=0.173 Sum_probs=21.1
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHH
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
.+..++..|++.+|++||+|.++++
T Consensus 228 ~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 228 QLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred HHHHHHHHHccCCcccCcCHHHHhh
Confidence 3556778999999999999998864
No 86
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=40.01 E-value=22 Score=33.24 Aligned_cols=27 Identities=11% Similarity=0.331 Sum_probs=23.0
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++..|++.+|.+||++.+++..|.
T Consensus 240 ~~~li~~cl~~~p~~Rps~~~l~~~l~ 266 (316)
T cd05108 240 VYMIMVKCWMIDADSRPKFRELIIEFS 266 (316)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 445678899999999999999988874
No 87
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=39.63 E-value=23 Score=32.23 Aligned_cols=25 Identities=20% Similarity=0.239 Sum_probs=21.2
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVM 308 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~m 308 (357)
+..++..|++.+|.+||+|.+++..
T Consensus 229 ~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 229 FKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHccCCcccCcCHHHHHHh
Confidence 4567788999999999999998764
No 88
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=39.36 E-value=23 Score=31.60 Aligned_cols=27 Identities=22% Similarity=0.312 Sum_probs=22.6
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++.-|...+|.+||++.++++.|+
T Consensus 233 ~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 233 LANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 445667899999999999999998763
No 89
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=37.98 E-value=29 Score=31.05 Aligned_cols=28 Identities=21% Similarity=0.382 Sum_probs=23.9
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+-.++..|.+.+|.+||++.++++.|+.
T Consensus 233 ~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 233 LYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 4457788999999999999999988863
No 90
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=37.66 E-value=23 Score=32.14 Aligned_cols=25 Identities=16% Similarity=0.217 Sum_probs=21.3
Q ss_pred hhHhhhhhccCCCCCCCHHHHHHHH
Q 046163 285 PLFILLVSVEDPADRPNMSSVAVML 309 (357)
Q Consensus 285 ~~~~~~c~~~~~~~RP~M~~Vv~mL 309 (357)
..++.-|.+.+|.+||++.+++..|
T Consensus 237 ~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 237 ADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHhc
Confidence 4566789999999999999998765
No 91
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=37.39 E-value=28 Score=31.56 Aligned_cols=24 Identities=17% Similarity=0.227 Sum_probs=18.8
Q ss_pred hHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 286 LFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 286 ~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
.+...|. .+|.+||++.+|+++|.
T Consensus 244 ~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 244 EVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHh-hCcccCCCHHHHHHHhc
Confidence 3445577 46999999999999874
No 92
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=36.84 E-value=25 Score=30.46 Aligned_cols=26 Identities=19% Similarity=0.174 Sum_probs=22.1
Q ss_pred chhhhHhhhhhccCCCCCCCHHHHHH
Q 046163 282 TTIPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 282 ~~v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
.-+..++..|...+|++||++.++++
T Consensus 215 ~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 215 PEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHHHccCCchhccCHHHHhh
Confidence 34667888999999999999998875
No 93
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=36.41 E-value=37 Score=31.18 Aligned_cols=27 Identities=7% Similarity=-0.017 Sum_probs=22.6
Q ss_pred chhhhHhhhhhccCCCCCCCHHHHHHH
Q 046163 282 TTIPLFILLVSVEDPADRPNMSSVAVM 308 (357)
Q Consensus 282 ~~v~~~~~~c~~~~~~~RP~M~~Vv~m 308 (357)
.-+..++..|.+.+|.+||++.+++..
T Consensus 256 ~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 256 DDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 345567788999999999999999875
No 94
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=36.13 E-value=32 Score=28.82 Aligned_cols=27 Identities=11% Similarity=0.105 Sum_probs=22.7
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++..|.+.+|.+||++.+++..+.
T Consensus 141 ~~~~i~~cl~~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 141 FADFMRVCASRLPQRREAANHYLAHCR 167 (176)
T ss_pred HHHHHHHHHhcccccccCHHHHHHHHH
Confidence 456778899999999999999887763
No 95
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=35.65 E-value=31 Score=32.11 Aligned_cols=27 Identities=19% Similarity=0.309 Sum_probs=23.6
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..++.-|...+|.+||++.+++..|+
T Consensus 273 ~~~li~~cl~~~p~~Rpt~~ell~~l~ 299 (302)
T cd05055 273 IYDIMKTCWDADPLKRPTFKQIVQLIG 299 (302)
T ss_pred HHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 456778899999999999999999886
No 96
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=35.18 E-value=24 Score=38.03 Aligned_cols=27 Identities=19% Similarity=0.292 Sum_probs=24.1
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+-++.|.|+|++..+||+..++|.+|.
T Consensus 863 L~qLMldCWqkdR~~RP~F~qiV~~lD 889 (996)
T KOG0196|consen 863 LYQLMLDCWQKDRNRRPKFAQIVSTLD 889 (996)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHHHH
Confidence 446889999999999999999999985
No 97
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=34.40 E-value=28 Score=34.44 Aligned_cols=28 Identities=18% Similarity=0.159 Sum_probs=23.6
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++.-|++.+|.+||+|.+++.+|+.
T Consensus 371 l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 371 IYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 3456667999999999999999999874
No 98
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=33.91 E-value=31 Score=31.62 Aligned_cols=24 Identities=25% Similarity=0.274 Sum_probs=20.5
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++..|++.+|.+||+|.+++.
T Consensus 242 ~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 242 FKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHh
Confidence 456788999999999999988764
No 99
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=33.89 E-value=28 Score=31.07 Aligned_cols=24 Identities=21% Similarity=0.415 Sum_probs=19.8
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++..|.+.+|.+||+|.+|+.
T Consensus 229 ~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 229 LRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred HHHHHHHHhhCChhhCcCHHHHhh
Confidence 345667899999999999999874
No 100
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=33.51 E-value=38 Score=33.21 Aligned_cols=27 Identities=19% Similarity=0.343 Sum_probs=22.7
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+..+.-.|+..+|..||++.+++.+|+
T Consensus 275 l~~l~~~CW~~dp~~RP~f~ei~~~l~ 301 (362)
T KOG0192|consen 275 LSSLMERCWLVDPSRRPSFLEIVSRLE 301 (362)
T ss_pred HHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence 344555699999999999999999986
No 101
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=33.47 E-value=29 Score=30.74 Aligned_cols=26 Identities=38% Similarity=0.595 Sum_probs=21.9
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVML 309 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL 309 (357)
+..++..|...+|.+||++.+++.+|
T Consensus 233 ~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 233 IYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 44577889999999999999988764
No 102
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=33.31 E-value=28 Score=31.61 Aligned_cols=26 Identities=23% Similarity=0.220 Sum_probs=21.5
Q ss_pred cchhhhHhhhhhccCCCCCCCHHHHH
Q 046163 281 GTTIPLFILLVSVEDPADRPNMSSVA 306 (357)
Q Consensus 281 ~~~v~~~~~~c~~~~~~~RP~M~~Vv 306 (357)
...+..++..|++.+|.+||+|.+++
T Consensus 256 ~~~~~~li~~~l~~~P~~Rp~~~~il 281 (286)
T cd07846 256 SGLVLDLAKQCLRIDPDDRPSSSQLL 281 (286)
T ss_pred CHHHHHHHHHHhcCCcccchhHHHHh
Confidence 34466677889999999999999876
No 103
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=33.07 E-value=37 Score=30.72 Aligned_cols=28 Identities=21% Similarity=0.350 Sum_probs=24.0
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
.+..++..|.+.+|.+||++.+++.+|.
T Consensus 247 ~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 247 RLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 3556778899999999999999998874
No 104
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=32.85 E-value=36 Score=32.16 Aligned_cols=28 Identities=14% Similarity=0.211 Sum_probs=23.8
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++.-|.+.+|.+||+|.+++..|+.
T Consensus 265 l~~li~~cl~~~p~~Rps~~ell~~l~~ 292 (334)
T cd05100 265 LYMIMRECWHAVPSQRPTFKQLVEDLDR 292 (334)
T ss_pred HHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence 4466788999999999999999988863
No 105
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=32.59 E-value=36 Score=30.74 Aligned_cols=24 Identities=21% Similarity=0.400 Sum_probs=18.9
Q ss_pred hHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 286 LFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 286 ~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
.+.-.|. .+|.+||++.+++..|+
T Consensus 245 ~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 245 EVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HHHHHHh-cCcccCCCHHHHHHHhc
Confidence 3445576 57999999999998875
No 106
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=30.89 E-value=39 Score=30.42 Aligned_cols=28 Identities=18% Similarity=0.196 Sum_probs=23.4
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++.-|.+.+|++||+|.+|.+.|+.
T Consensus 227 l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 227 MYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 3456678999999999999999988863
No 107
>PF08105 Antimicrobial10: Metchnikowin family; InterPro: IPR012513 This family consists of the metchnikowin family of antimicrobial peptides from Drosophila. metchnikowin is a proline-rich peptide whose expression is immune-inducible. Induction of the metchnikowin gene expression can be mediated either by the TOLL pathway or by the imd gene product. The metchnikowin peptide is unique among the Drosophila antimicrobial peptides in that it is active against both bacteria and fungi [].
Probab=30.50 E-value=56 Score=22.18 Aligned_cols=26 Identities=23% Similarity=0.391 Sum_probs=17.5
Q ss_pred CchhhHHHHHHHHHHHHhhccccCCC
Q 046163 1 MNMNMILVFLSVLSFLISLPRAYGNP 26 (357)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 26 (357)
||+|-..+++.++.++.+...+..++
T Consensus 1 Mqlnlg~i~l~lL~ll~~~~~~~~e~ 26 (52)
T PF08105_consen 1 MQLNLGAIFLALLGLLALAGSVLTEA 26 (52)
T ss_pred CcccHHHHHHHHHHHHHhccccccch
Confidence 89998888777666655555555444
No 108
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=30.48 E-value=33 Score=30.49 Aligned_cols=24 Identities=25% Similarity=0.411 Sum_probs=19.9
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++..|.+.+|.+||++.+++.
T Consensus 229 ~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 229 FNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHHHHHHHHhcChhhCcCHHHHhc
Confidence 445667899999999999998864
No 109
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=29.98 E-value=42 Score=30.24 Aligned_cols=29 Identities=21% Similarity=0.360 Sum_probs=24.0
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
.+..++..|...+|.+||++.+++..|+.
T Consensus 236 ~~~~li~~~l~~~P~~Rpt~~~~~~~l~~ 264 (270)
T cd05056 236 TLYSLMTKCWAYDPSKRPRFTELKAQLSD 264 (270)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 34456678999999999999999988864
No 110
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=29.67 E-value=45 Score=30.06 Aligned_cols=23 Identities=26% Similarity=0.433 Sum_probs=18.3
Q ss_pred HhhhhhccCCCCCCCHHHHHHHHh
Q 046163 287 FILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 287 ~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
+...|. .+|.+||++.+|+++|.
T Consensus 246 ~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 246 VMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred HHHHHh-cCcccccCHHHHHHHhc
Confidence 445565 49999999999999874
No 111
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=29.67 E-value=35 Score=30.30 Aligned_cols=24 Identities=29% Similarity=0.519 Sum_probs=20.1
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++..|++.+|.+||++.+++.
T Consensus 229 l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 229 LRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HHHHHHHHccCChhhCCCHHHHhh
Confidence 446678899999999999998864
No 112
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=29.54 E-value=32 Score=31.47 Aligned_cols=26 Identities=23% Similarity=0.443 Sum_probs=21.4
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVML 309 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL 309 (357)
+..++..|++.+|.+||++.++..+.
T Consensus 242 ~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 242 LRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 44566789999999999999998763
No 113
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=29.53 E-value=46 Score=31.02 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=23.6
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++.-|.+.+|.+||++.+++..|..
T Consensus 265 l~~li~~cl~~~p~~Rps~~~ll~~l~~ 292 (314)
T cd05099 265 LYMLMRECWHAVPTQRPTFKQLVEALDK 292 (314)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 4456778999999999999999988864
No 114
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=28.33 E-value=44 Score=30.30 Aligned_cols=25 Identities=24% Similarity=0.134 Sum_probs=21.1
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHH
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
.+..++..|.+.+|.+||++.+++.
T Consensus 255 ~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 255 EAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred HHHHHHHHhcccCcccCCCHHHHhh
Confidence 3557788999999999999988864
No 115
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=28.32 E-value=46 Score=30.21 Aligned_cols=28 Identities=11% Similarity=0.211 Sum_probs=23.3
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHHHhC
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVMLAS 311 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~mL~~ 311 (357)
+..++.-|.+.+|.+||++.+++..|+.
T Consensus 240 ~~~li~~~l~~dp~~Rp~~~~l~~~l~~ 267 (279)
T cd05109 240 VYMIMVKCWMIDSECRPRFRELVDEFSR 267 (279)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 3456678999999999999999988764
No 116
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=28.16 E-value=43 Score=29.79 Aligned_cols=24 Identities=21% Similarity=0.368 Sum_probs=20.2
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++..|++.+|.+||++.+++.
T Consensus 230 ~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 230 LGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred HHHHHHHHhccCcccCCCHHHHhc
Confidence 456778899999999999998863
No 117
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=27.07 E-value=34 Score=31.04 Aligned_cols=25 Identities=16% Similarity=0.133 Sum_probs=20.6
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHH
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
-+..++.-|+..+|.+||++.+++.
T Consensus 260 ~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 260 PALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HHHHHHHHHhccCchhcccHHHHhc
Confidence 3556677899999999999998864
No 118
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=26.33 E-value=48 Score=29.13 Aligned_cols=25 Identities=20% Similarity=0.276 Sum_probs=20.4
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHH
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
-+..++..|++.+|.+||++.+++.
T Consensus 232 ~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 232 EAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHHHHHHHhCcCChhhCCCHHHHhh
Confidence 3456678899999999999998863
No 119
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=25.75 E-value=43 Score=31.20 Aligned_cols=25 Identities=12% Similarity=0.268 Sum_probs=21.2
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVM 308 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~m 308 (357)
+..++..|.+.+|.+||++.+++..
T Consensus 263 ~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 263 FQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 5577889999999999999988644
No 120
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=25.21 E-value=45 Score=30.29 Aligned_cols=25 Identities=20% Similarity=0.084 Sum_probs=20.6
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHH
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
.+..++.-|.+.+|.+||+|.+++.
T Consensus 255 ~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 255 DGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHhc
Confidence 4556778899999999999998863
No 121
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=24.74 E-value=56 Score=29.45 Aligned_cols=24 Identities=13% Similarity=0.032 Sum_probs=20.2
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++.-|++.+|.+||+|.+++.
T Consensus 256 ~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 256 ALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred HHHHHHHHhccCcccCcCHHHHhh
Confidence 446678899999999999998864
No 122
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=24.52 E-value=50 Score=29.26 Aligned_cols=24 Identities=29% Similarity=0.360 Sum_probs=19.9
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++..|.+.+|.+||++.+++.
T Consensus 231 ~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 231 AKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHHHHHHHhhcCcccCcCHHHHhc
Confidence 455678899999999999998763
No 123
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=24.28 E-value=53 Score=29.25 Aligned_cols=23 Identities=26% Similarity=0.265 Sum_probs=19.0
Q ss_pred hhhHhhhhhccCCCCCCCHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVA 306 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv 306 (357)
+..++..|++.+|.+||++.+++
T Consensus 237 ~~~li~~~l~~~p~~R~~~~~i~ 259 (264)
T cd06626 237 GKDFLDRCLESDPKKRPTASELL 259 (264)
T ss_pred HHHHHHHHccCCcccCCCHHHHh
Confidence 34566789999999999998865
No 124
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=24.20 E-value=54 Score=29.74 Aligned_cols=26 Identities=15% Similarity=0.250 Sum_probs=21.4
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHHH
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAVM 308 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~m 308 (357)
.+..++..|.+.+|.+||+|.+++..
T Consensus 228 ~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 228 PLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHhC
Confidence 35567788999999999999988763
No 125
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=24.13 E-value=57 Score=29.63 Aligned_cols=25 Identities=24% Similarity=0.276 Sum_probs=20.3
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHH
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
.+..++.-|.+.+|.+||++.+++.
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 228 PFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred HHHHHHHHHcccCcccCcCHHHHHh
Confidence 3456777899999999999988753
No 126
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=24.07 E-value=53 Score=29.63 Aligned_cols=26 Identities=12% Similarity=0.040 Sum_probs=21.2
Q ss_pred chhhhHhhhhhccCCCCCCCHHHHHH
Q 046163 282 TTIPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 282 ~~v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
..+..++.-|.+.+|.+||++.+++.
T Consensus 258 ~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 258 PSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 34556778899999999999998864
No 127
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=23.83 E-value=56 Score=30.24 Aligned_cols=24 Identities=29% Similarity=0.452 Sum_probs=19.6
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++..|.+.+|.+||++.+++.
T Consensus 271 ~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 271 FHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred HHHHHHHHhhcCCCcCcCHHHHhc
Confidence 345677899999999999988764
No 128
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=23.80 E-value=58 Score=29.30 Aligned_cols=24 Identities=25% Similarity=0.283 Sum_probs=19.7
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++..|.+.+|.+||++.+++.
T Consensus 241 ~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 241 AKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred HHHHHHHHcCCCchhCCCHHHHHh
Confidence 445677899999999999998763
No 129
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=23.29 E-value=53 Score=30.05 Aligned_cols=24 Identities=21% Similarity=0.322 Sum_probs=20.0
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++..|.+.+|.+||+|.+++.
T Consensus 263 l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 263 FNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHHHHHHhhcChhhCcCHHHHhc
Confidence 455678899999999999998763
No 130
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=23.14 E-value=64 Score=29.28 Aligned_cols=24 Identities=25% Similarity=0.282 Sum_probs=20.1
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++.-|.+.+|.+||++.+++.
T Consensus 259 ~~~li~~~l~~~p~~Rps~~ell~ 282 (286)
T cd06638 259 FNDFIRKCLTKDYEKRPTVSDLLQ 282 (286)
T ss_pred HHHHHHHHccCCcccCCCHHHHhh
Confidence 445677899999999999998874
No 131
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=22.94 E-value=65 Score=28.66 Aligned_cols=24 Identities=17% Similarity=0.358 Sum_probs=19.4
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++.-|.+.+|.+||++.+++.
T Consensus 228 ~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 228 LRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred HHHHHHHHHhCCcccCCCHHHHhh
Confidence 345667799999999999998864
No 132
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=22.92 E-value=55 Score=29.13 Aligned_cols=25 Identities=20% Similarity=0.308 Sum_probs=20.7
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVM 308 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~m 308 (357)
+..++..|.+.+|.+||++.+++..
T Consensus 229 ~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 229 LISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HHHHHHHHcccCcccCCCHHHHhhC
Confidence 4567778999999999999988754
No 133
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=22.91 E-value=56 Score=28.96 Aligned_cols=25 Identities=24% Similarity=0.392 Sum_probs=20.1
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHH
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
.+-.++..|.+.+|.+||++.+++.
T Consensus 229 ~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 229 DLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred HHHHHHHHHhccChhhCcCHHHHhh
Confidence 3445667899999999999998863
No 134
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=22.68 E-value=59 Score=29.43 Aligned_cols=27 Identities=15% Similarity=0.145 Sum_probs=21.6
Q ss_pred cchhhhHhhhhhccCCCCCCCHHHHHH
Q 046163 281 GTTIPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 281 ~~~v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
...+..++..|.+.+|.+||++.+++.
T Consensus 256 ~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 256 SSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 344556778899999999999987763
No 135
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=22.52 E-value=59 Score=29.20 Aligned_cols=24 Identities=21% Similarity=0.313 Sum_probs=19.6
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++..|.+.+|.+||++.+++.
T Consensus 245 ~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 245 FQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHHHHHHHcCCChhhCCCHHHHhh
Confidence 445667899999999999988763
No 136
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=22.37 E-value=58 Score=29.12 Aligned_cols=24 Identities=21% Similarity=0.238 Sum_probs=20.2
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++..|...+|.+||++.+++.
T Consensus 248 ~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 248 FNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HHHHHHHHhhcChhhCcCHHHHhc
Confidence 446777899999999999998864
No 137
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=22.14 E-value=54 Score=33.42 Aligned_cols=25 Identities=32% Similarity=0.460 Sum_probs=21.2
Q ss_pred hHhhhhhccCCCCCCCHHHHHHHHh
Q 046163 286 LFILLVSVEDPADRPNMSSVAVMLA 310 (357)
Q Consensus 286 ~~~~~c~~~~~~~RP~M~~Vv~mL~ 310 (357)
.+.--|++.+|.+||+|.+|++.|+
T Consensus 394 ~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 394 KVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred HHHHHhccCChhhccCHHHHHHHHH
Confidence 3444799999999999999988885
No 138
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=22.09 E-value=54 Score=29.49 Aligned_cols=19 Identities=16% Similarity=0.235 Sum_probs=16.0
Q ss_pred hhhhhccCCCCCCCHHHHH
Q 046163 288 ILLVSVEDPADRPNMSSVA 306 (357)
Q Consensus 288 ~~~c~~~~~~~RP~M~~Vv 306 (357)
++.|...+|.+||+|.+++
T Consensus 241 li~~~~~~p~~Rp~~~eil 259 (266)
T cd06651 241 FLGCIFVEARHRPSAEELL 259 (266)
T ss_pred HHHHhcCChhhCcCHHHHh
Confidence 4468888999999999885
No 139
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=21.83 E-value=62 Score=28.81 Aligned_cols=25 Identities=24% Similarity=0.400 Sum_probs=20.3
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHH
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
.+..++..|.+.+|.+||++.+++.
T Consensus 239 ~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 239 SFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhh
Confidence 3456777899999999999988763
No 140
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=21.13 E-value=64 Score=29.73 Aligned_cols=25 Identities=12% Similarity=-0.051 Sum_probs=20.5
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHH
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
-+..++..|.+.+|.+||++.+++.
T Consensus 288 ~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 288 QGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhc
Confidence 3556778899999999999988763
No 141
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=20.83 E-value=51 Score=29.30 Aligned_cols=24 Identities=25% Similarity=0.376 Sum_probs=20.3
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
+..++..|.+.+|.+||++.+++.
T Consensus 236 ~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 236 FHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHHHHcCCChhhCCCHHHHhc
Confidence 456778899999999999998864
No 142
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=20.78 E-value=69 Score=30.21 Aligned_cols=25 Identities=16% Similarity=0.353 Sum_probs=20.4
Q ss_pred hhhHhhhhhccCCCCCCCHHHHHHH
Q 046163 284 IPLFILLVSVEDPADRPNMSSVAVM 308 (357)
Q Consensus 284 v~~~~~~c~~~~~~~RP~M~~Vv~m 308 (357)
+..++-.|.+.+|++||++.+++..
T Consensus 277 l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 277 FQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred HHHHHHHHccCCcccCCCHHHHhcC
Confidence 4557778999999999999987643
No 143
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=20.54 E-value=71 Score=28.74 Aligned_cols=25 Identities=16% Similarity=0.214 Sum_probs=20.1
Q ss_pred hhhhHhhhhhccCCCCCCCHHHHHH
Q 046163 283 TIPLFILLVSVEDPADRPNMSSVAV 307 (357)
Q Consensus 283 ~v~~~~~~c~~~~~~~RP~M~~Vv~ 307 (357)
.+..++.-|.+.+|.+||+|.+|+.
T Consensus 244 ~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 244 VALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred HHHHHHHHHhcCChhhCCCHHHHhh
Confidence 3445667799999999999998864
No 144
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=20.38 E-value=63 Score=29.31 Aligned_cols=22 Identities=14% Similarity=0.092 Sum_probs=18.6
Q ss_pred hhHhhhhhccCCCCCCCHHHHH
Q 046163 285 PLFILLVSVEDPADRPNMSSVA 306 (357)
Q Consensus 285 ~~~~~~c~~~~~~~RP~M~~Vv 306 (357)
..++.-|.+.+|.+||++.+++
T Consensus 258 ~~li~~~l~~~P~~Rpt~~~~l 279 (284)
T cd07860 258 RDLLSQMLHYDPNKRISAKAAL 279 (284)
T ss_pred HHHHHHhcCCCcccCCCHHHHh
Confidence 3466789999999999998876
No 145
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=20.22 E-value=59 Score=26.71 Aligned_cols=6 Identities=0% Similarity=0.219 Sum_probs=2.3
Q ss_pred hhHHHH
Q 046163 4 NMILVF 9 (357)
Q Consensus 4 ~~~~~~ 9 (357)
|.+|++
T Consensus 2 W~l~~i 7 (130)
T PF12273_consen 2 WVLFAI 7 (130)
T ss_pred eeeHHH
Confidence 343333
Done!