BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046164
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Query: 29 RRPCDVFINHRGTDTKRTIAGLLHDHLSRLRLNPFLDSKNMKPGDRLFDKIDTAIKHCKL 88
R DVF++ RG DT++T L++ L+ + F D K ++ G + ++ AI+ +
Sbjct: 9 RWSYDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQF 68
Query: 89 GVAVFSPRYCESYFCLHELALIMESRKK----VIPIFYDVKPSQLQVPDNGTCSRKELQR 144
+ VFS Y S +CL+EL IME + + VIPIFYDV PS + R + +
Sbjct: 69 AIVVFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHV---------RNQKES 119
Query: 145 FSRALEE 151
F++A EE
Sbjct: 120 FAKAFEE 126
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 34 VFINHRGTDTKRTIAGLLHDHLSRLRLNPFLDSKNMKPGDRLFDKIDTAIKHCKLGVAVF 93
VFIN RG D ++ L L + ++N F+D + + G L DT I K+ + +F
Sbjct: 24 VFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEER-GKYLISLFDT-IGESKIALVIF 81
Query: 94 SPRYCESYFCLHELALIME----SRKKVIPIFY 122
S YCES++C+ EL I E +R +IPIFY
Sbjct: 82 SEGYCESHWCMDELVKIKEYMDQNRLIIIPIFY 114
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 34 VFINHRGTDTKRTIAGLLHDHLSRLRLNPFLDSKNMKPGDRLFDKIDTAIKHCKLGVAVF 93
VFI RG D ++ L L +N F+D +N G + + + T I+ +L + +F
Sbjct: 17 VFICFRGADVRKHFISFLVPALREANINVFID-ENEFLGSEMANLL-TRIEESELALVIF 74
Query: 94 SPRYCESYFCLHELALIMESRKK----VIPIFYDVKPSQLQ 130
S + S+ CL+ELA I E + + VIPIFY VKPS ++
Sbjct: 75 SVDFTRSHRCLNELAKIKERKDQGRLIVIPIFYKVKPSAVK 115
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 14/108 (12%)
Query: 21 HQIQLPITRRPCDVFINHRGTDTKRTIAGLLHDHLSRLRLNPFLDSKNMKPGD--RLFDK 78
H I LP + VFIN RG + + + G L + ++N F D ++ + LF +
Sbjct: 351 HGITLPQYQ----VFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVELRGTNLNYLFRR 406
Query: 79 IDTAIKHCKLGVAVFSPRYCESYFCLHELALIMESRKK----VIPIFY 122
I+ + ++ VA+FS RY ES +CL EL + E ++ V+P+FY
Sbjct: 407 IEES----RVAVAIFSERYTESCWCLDELVKMKEQMEQGKLVVVPVFY 450
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 15/139 (10%)
Query: 33 DVFINHRGTDTKRTIAGLLHDHLSRLRLNPFLDSKNMKPGDRLFDKIDTAIKHCKLGVAV 92
DVF + RG D + L + F D ++K + ++ AI+ K+ V +
Sbjct: 12 DVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDD-HIKRSHTIGHELRAAIRESKISVVL 70
Query: 93 FSPRYCESYFCLHELALIMESRK----KVIPIFYDVKPSQL--QVPDNG-----TCSRKE 141
FS Y S +CL EL IM+ ++ KV+P+FY V PS + Q G TC K
Sbjct: 71 FSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMSFLETCCGKT 130
Query: 142 LQR---FSRALEEAKYTVG 157
+R + RAL +A +G
Sbjct: 131 EERQHNWRRALTDAANILG 149
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 34 VFINHRGTDTKRTIAGLLHDHLSRLRLNPFLDSKNMKPGDRLFDKIDTAIKHCKLGVAVF 93
VFIN RG D + L + +N F+D + D + + I+ ++ V +F
Sbjct: 16 VFINFRGKDLRNGFLSFLEPAMREANINVFIDKDEVVGTDLV--NLFVRIQESRVAVVIF 73
Query: 94 SPRYCESYFCLHELA----LIMESRKKVIPIFYDVKPSQL 129
S Y S +CL ELA I + IPIFY + PS +
Sbjct: 74 SKDYTSSEWCLDELAEIKDCINQGGLNAIPIFYKLAPSSV 113
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 16/142 (11%)
Query: 30 RPCDVFINHRGTDTKRTIAGLLHDHLSRLRLNPFLDSKNMKPGDRLFDKIDTAIKHCKLG 89
R DVF + RG D + + L L R + F+D + ++ + ++ +AIK ++
Sbjct: 10 RRYDVFPSFRGEDVRDSFLSHLLKEL-RGKAITFIDDE-IERSRSIGPELLSAIKESRIA 67
Query: 90 VAVFSPRYCESYFCLHELALIMES----RKKVIPIFYDVKPSQL--QVPDNG-----TC- 137
+ +FS Y S +CL+EL I + + VIPIF+ V S++ Q + G TC
Sbjct: 68 IVIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQTGEFGKVFEETCK 127
Query: 138 --SRKELQRFSRALEEAKYTVG 157
S E Q + +AL G
Sbjct: 128 AKSEDEKQSWKQALAAVAVMAG 149
>sp|E9Q8I9|FRY_MOUSE Protein furry homolog OS=Mus musculus GN=Fry PE=1 SV=1
Length = 3020
Score = 37.4 bits (85), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 98 CESYFCLH-ELALIMESRKKVIPIFYDVKPSQLQVPDNGTCSRKELQRFSRALEEAKYTV 156
C+ + LH +L L+ +S K+I ++V VP+ SR EL R L+EA +
Sbjct: 2835 CQRLYKLHFQLLLLYQSYCKLIGQVHEVS----SVPELLNMSR-ELSDLKRNLKEATAAI 2889
Query: 157 GLTFDSINGDWSEFLTTATDAVINNLIE 184
I G WSE T+T+A I +++E
Sbjct: 2890 ATDPLYIEGAWSEPTFTSTEAAIQSMLE 2917
>sp|Q15399|TLR1_HUMAN Toll-like receptor 1 OS=Homo sapiens GN=TLR1 PE=1 SV=3
Length = 786
Score = 33.9 bits (76), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 35 FINHRGTDTKRTIAGLLHDHLSRLRLNPFLDSKNMKPGDRLFDKIDTAIKHCKLGVAVFS 94
FI++ G D+ LL + L + + L +N PG + + I T I+ + V S
Sbjct: 640 FISYSGHDSFWVKNELLPN-LEKEGMQICLHERNFVPGKSIVENIITCIEKSYKSIFVLS 698
Query: 95 PRYCESYFCLHEL-----ALIMESRKKVIPIFYDVKPSQLQVPDN 134
P + +S +C +EL L E +I I + P Q +P +
Sbjct: 699 PNFVQSEWCHYELYFAHHNLFHEGSNSLILILLEPIP-QYSIPSS 742
>sp|B1XT38|SYP_POLNS Proline--tRNA ligase OS=Polynucleobacter necessarius subsp.
necessarius (strain STIR1) GN=proS PE=3 SV=1
Length = 580
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 7 TKSLCRKIIHHRPHHQIQLPITRRPCDVFINHRGTDTKRTIAGL---LHDHLSRLRLNPF 63
T+ L I I PI+ PC+V I G + + LHD L ++
Sbjct: 451 TRLLGAAIEQGHDEKGIIWPISMAPCEVVICPMGYEKSEAVKAACDQLHDGLLAAGVDVI 510
Query: 64 LDSKNMKPGDRLFD 77
LD +N +PG D
Sbjct: 511 LDDRNERPGAMFAD 524
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 40/168 (23%)
Query: 42 DTKRTIAGLLHDHLSRLRLNPFLDSKNM--KPGDRLFDKIDTAIKHCKLGVAVFSPRYCE 99
D + + L L +N F+D + + K LF +I + K+ +A+FS C+
Sbjct: 52 DVSKGLINFLEPVLQNKNINVFIDEEEVRGKGLKNLFKRI----QDSKISLAIFSESKCD 107
Query: 100 SYFCLHELALIMESRKKVIPIFYDVKPS-QLQVPDNGTCSRKELQRFSRALEE-----AK 153
++L ES + IPIFY V + L N +K+L + A+EE A
Sbjct: 108 ----FNDLLKNNESADEAIPIFYKVDATGDLADLQNSVKCKKDL--INSAVEEMSKLLAN 161
Query: 154 YTVGLTFDS----------------------INGDWSEFLTTATDAVI 179
+VG+ + IN WS T DA I
Sbjct: 162 ISVGVYREKEANSKCFMVPARKLQMSHSEKLINWTWSSIYETPNDAAI 209
>sp|P34114|PHS2_DICDI Glycogen phosphorylase 2 OS=Dictyostelium discoideum GN=glpD PE=1
SV=2
Length = 993
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 117 VIPIFYDVKPSQLQVPDNGTCSRKELQRFSRALEEAKYTVGLTFDSINGD-WSEFLTTAT 175
V P+FY++ P++ Q NG R+ +Q+ + L E L S+N D W L
Sbjct: 551 VFPLFYEIWPNKFQNKTNGVTPRRWIQQSNPQLAE------LITRSLNSDRWLVNLD--- 601
Query: 176 DAVINNLIEVEEESTANREPMGFLQN 201
+I +L+ + + S+ +E M +N
Sbjct: 602 --IIKDLVHLADNSSFQKEWMEIKRN 625
>sp|B8D111|HIS1_HALOH ATP phosphoribosyltransferase OS=Halothermothrix orenii (strain H
168 / OCM 544 / DSM 9562) GN=hisG PE=3 SV=1
Length = 223
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 73/177 (41%), Gaps = 21/177 (11%)
Query: 9 SLCRKIIHHRPHHQIQLPITR-RPCDVFINHRGTDTKRTIAGLLHDHLSRLRLNPFLDSK 67
+L R+++ H + + + + V++ H D T +L +H
Sbjct: 35 TLSRQLVFHDKKTRNSFLLAKPKDVPVYVEHGAADLGITGKDVLLEH------------- 81
Query: 68 NMKPGDRLFDKIDTAIKHCKLGVAVFSPRYCESYFCLHELALIMESRKKVIPIFYDVKPS 127
G L++ +D + CKL VAV + +S + E + + S +++ F+ K
Sbjct: 82 ----GRNLYEMVDLGVGKCKLVVAVPESKGYKSLADIPEYSRVATSYPEIVKKFFQGKGI 137
Query: 128 QLQVPD-NGTCSRKELQRFSRALEEAKYTVGLTFDSINGDWSE-FLTTATDAVINNL 182
Q++V NG+ L + + + T G T N E +T++ V+NN+
Sbjct: 138 QVEVIKLNGSVELAPLVDLADVIVDISST-GTTLKKNNLIPMETIVTSSARLVVNNV 193
>sp|B0G103|PKS10_DICDI Probable polyketide synthase 10 OS=Dictyostelium discoideum
GN=pks10 PE=3 SV=1
Length = 2485
Score = 32.0 bits (71), Expect = 2.7, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 89 GVAVFSPRYCESYFCLHELA------LIMESRKKVIPIFYDVKPSQLQVPDNGTCSRKEL 142
G++ + R+ E+Y L E++ L +E K P+F+ + PS+ D R L
Sbjct: 51 GISKTNERWSENYSKLGEISNGYAGVLPLEELKSFDPLFFGISPSEASTIDPQ--QRLLL 108
Query: 143 QRFSRALEEAKYTVGLTFDSING-DWSEFLTTATDAVINNLIEVEEE 188
+ +LE+A G+ SI G D S F+ ++T +++ + E+
Sbjct: 109 KTTWESLEDA----GIDHQSIRGSDCSVFIGSSTTEYRESIVNINEQ 151
>sp|Q65ZW8|PNP_BORGA Polyribonucleotide nucleotidyltransferase OS=Borrelia garinii
(strain PBi) GN=pnp PE=3 SV=2
Length = 721
Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/57 (21%), Positives = 31/57 (54%)
Query: 79 IDTAIKHCKLGVAVFSPRYCESYFCLHELALIMESRKKVIPIFYDVKPSQLQVPDNG 135
+DT I ++G++ ++P+ + + +++L++ S K + D ++Q+ NG
Sbjct: 537 MDTVISDSRVGISKYAPKIVQLQIDIDKISLVIGSTGKTVKAITDEFEVKVQIEQNG 593
>sp|Q6L1Z4|SYA_PICTO Alanine--tRNA ligase OS=Picrophilus torridus (strain ATCC 700027 /
DSM 9790 / JCM 10055 / NBRC 100828) GN=alaS PE=3 SV=1
Length = 870
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 110 IMESRKKVIPIFYD-VKPSQLQVPDNGTCSRKELQRFSRALEEAKY--TVGLTFDSINGD 166
+++ + ++ +F D V PS ++V G +R L+R R +E+ K+ ++ FD++ +
Sbjct: 327 LVDHARTLLLMFSDYVIPSNVKV---GYLARMLLRRSFRFMEKIKFNGSINDIFDAVYDE 383
Query: 167 WSEFLTTATDAVINNLIEVEEE 188
+++ + INN+I++E E
Sbjct: 384 FNKIIKNYDKDFINNIIKIETE 405
>sp|Q54F65|TIRC_DICDI Protein tirC OS=Dictyostelium discoideum GN=tirC PE=2 SV=1
Length = 201
Score = 30.0 bits (66), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
Query: 52 HDHLSRLRLNPFLDSKNMKP---------GDRLFDKIDTAIKHCKLGVAVFSP 95
H+++ R +++ FL +P G + +K++ I +CK G+ + SP
Sbjct: 62 HNNIVREKVSKFLFEMGFEPILLFEKPNNGQTIIEKLEKEISNCKFGIVIMSP 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,596,365
Number of Sequences: 539616
Number of extensions: 2984634
Number of successful extensions: 7013
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 6999
Number of HSP's gapped (non-prelim): 20
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)