BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046172
(198 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 164 bits (414), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 116/194 (59%), Gaps = 2/194 (1%)
Query: 5 LDDEEKNIFLDIVCFFKREDKDFIIKFLNACGFDAQIGISDLVNKSLIVI-HNNQITMHD 63
LDD E+ IFLDI CFF R DKD + L+ CGF A +G LV+KSL+ I +N + M
Sbjct: 1051 LDDNERGIFLDIACFFNRIDKDNVAMLLDGCGFSAHVGFRGLVDKSLLTISQHNLVDMLS 1110
Query: 64 LLQEMGREVVKQESVNNPGERSRLWHYEDIIEVLTFNTGTEKIEGICFDMSKVKQIGLNL 123
+Q GRE+V+QES + PG+RSRLW+ + I V +TGT IEGI DM +K N
Sbjct: 1111 FIQATGREIVRQESADRPGDRSRLWNADYIRHVFINDTGTSAIEGIFLDMLNLK-FDANP 1169
Query: 124 DTFTKMHKLRFLKFYNSISEGKSKCMVSNCQGPILAKVRYFHWDGYPLTSLPSNIYPDKL 183
+ F KM LR LK Y S +E K + +K+R HW+ YPL+SLP + P+ L
Sbjct: 1170 NVFEKMCNLRLLKLYCSKAEEKHGVSFPQGLEYLPSKLRLLHWEYYPLSSLPKSFNPENL 1229
Query: 184 VFLEIPDSNIEQLW 197
V L +P S ++LW
Sbjct: 1230 VELNLPSSCAKKLW 1243
>sp|Q9FH83|WRK52_ARATH Probable WRKY transcription factor 52 OS=Arabidopsis thaliana
GN=WRKY52 PE=2 SV=3
Length = 1288
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 116/215 (53%), Gaps = 22/215 (10%)
Query: 1 SFDDLDDEEKNIFLDIVCFFKREDKDFIIKFLNACGFDAQIGISDLVNKSLIVIHNNQIT 60
++D L D EKNIFLDI CFF+ E+ +++I+ L CGF + I LV+K L+ I N++
Sbjct: 382 TYDTLSDNEKNIFLDIACFFQGENVNYVIQLLEGCGFFPHVEIDVLVDKCLVTISENRVW 441
Query: 61 MHDLLQEMGREVVKQESVNNPGERSRLWHYEDIIEVLTFN---------------TGTEK 105
+H L Q++GRE++ E+V R RLW I +L +N G+E+
Sbjct: 442 LHKLTQDIGREIINGETVQIE-RRRRLWEPWSIKYLLEYNEHKANGEPKTTFKRAQGSEE 500
Query: 106 IEGICFDMSKVKQIGLNLDTFTKMHKLRFLKFYNSISEGKSKCMVSNCQGPILA---KVR 162
IEG+ D S ++ L F M LR LK Y S E +++ G + + ++R
Sbjct: 501 IEGLFLDTSNLR-FDLQPSAFKNMLNLRLLKIYCSNPEVHP--VINFPTGSLHSLPNELR 557
Query: 163 YFHWDGYPLTSLPSNIYPDKLVFLEIPDSNIEQLW 197
HW+ YPL SLP N P LV + +P S +++LW
Sbjct: 558 LLHWENYPLKSLPQNFDPRHLVEINMPYSQLQKLW 592
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 1 SFDDLDDEEKNIFLDIVCFFKREDKDFIIKFLNACGFDAQIGISDLVNKSLIVIHNN-QI 59
S+DDL + +K +FL I F ED DF+ + D G+ L + SLI + +N +I
Sbjct: 1090 SYDDLQEMDKVLFLYIASLFNDEDVDFVAPLIAGIDLDVSSGLKVLADVSLISVSSNGEI 1149
Query: 60 TMHDLLQEMGREVVKQESV 78
MH L ++MG+E++ +S+
Sbjct: 1150 VMHSLQRQMGKEILHGQSM 1168
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 126 bits (317), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 112/213 (52%), Gaps = 18/213 (8%)
Query: 1 SFDDLDDEEKNIFLDIVCFFKREDKDFIIKFLNACGFDAQIGISDLVNKSLIVIHNNQIT 60
S+D L+D EKNIFLDI CFF+ E+ D++++ L CGF +GI LV KSL+ I N++
Sbjct: 375 SYDTLNDREKNIFLDIACFFQGENVDYVMQLLEGCGFFPHVGIDVLVEKSLVTISENRVR 434
Query: 61 MHDLLQEMGREVVKQESVNNPGERSRLWHYEDIIEVL-------------TFNTG--TEK 105
MH+L+Q++GR+++ +E+ RSRLW I +L TF E+
Sbjct: 435 MHNLIQDVGRQIINRET-RQTKRRSRLWEPCSIKYLLEDKEQNENEEQKTTFERAQVPEE 493
Query: 106 IEGICFDMSKVKQIGLNLDTFTKMHKLRFLKFYNSISE-GKSKCMVSNCQGPILAKVRYF 164
IEG+ D S + + F M LR K Y+S E + + +R
Sbjct: 494 IEGMFLDTSNL-SFDIKHVAFDNMLNLRLFKIYSSNPEVHHVNNFLKGSLSSLPNVLRLL 552
Query: 165 HWDGYPLTSLPSNIYPDKLVFLEIPDSNIEQLW 197
HW+ YPL LP N P LV + +P S +++LW
Sbjct: 553 HWENYPLQFLPQNFDPIHLVEINMPYSQLKKLW 585
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 10 KNIFLDIVCFFKREDKDFIIKFL-NACGFDAQIGISDLVNKSLI-VIHNNQITMHDLLQE 67
K +FL I F ED + + N D G+ L +SLI V N +I MH LL++
Sbjct: 1063 KALFLYIAGLFNDEDVGLVAPLIANIIDMDVSYGLKVLAYRSLIRVSSNGEIVMHYLLRQ 1122
Query: 68 MGREVVKQES 77
MG+E++ ES
Sbjct: 1123 MGKEILHTES 1132
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 116/203 (57%), Gaps = 6/203 (2%)
Query: 2 FDDLDDEEKNIFLDIVCFFKREDKDFIIKFLNACG-FDAQIGISDLVNKSLIV-IHNNQI 59
+D L D EK++FL I C F + ++++ + + A G+ L +KSLI N +I
Sbjct: 423 YDGLHDHEKDLFLHIACIFSGQHENYLKQMIIANNDTYVSFGLQVLADKSLIQKFENGRI 482
Query: 60 TMHDLLQEMGREVVKQESVNNPGERSRLWHYEDIIEVLTFNTGTEKIEGICFDMSKVK-Q 118
MH LL+++G+EVV+++S+ PG+R L + ++ VL+ NTGT + GI DM ++K +
Sbjct: 483 EMHSLLRQLGKEVVRKQSIYEPGKRQFLMNAKETCGVLSNNTGTGTVLGISLDMCEIKEE 542
Query: 119 IGLNLDTFTKMHKLRFLKFYNSIS---EGKSKCMVSNCQGPILAKVRYFHWDGYPLTSLP 175
+ ++ TF +M L +LKFY S + K K + L ++R HWD YPL P
Sbjct: 543 LYISEKTFEEMRNLVYLKFYMSSPIDDKMKVKLQLPEEGLSYLPQLRLLHWDAYPLEFFP 602
Query: 176 SNIYPDKLVFLEIPDSNIEQLWD 198
S+ P+ LV L + S +++LW
Sbjct: 603 SSFRPECLVELNMSHSKLKKLWS 625
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 12/198 (6%)
Query: 1 SFDDLDDEEKNIFLDIVCFFKREDKDFIIKFLNACGFDAQIGISDLVNKSLIVIHN-NQI 59
S+D L+ +++ +FLDI CF + E+KD+I++ L +C A+ G+ L++KSL+ I NQ+
Sbjct: 426 SYDGLEPKQQEMFLDIACFLRGEEKDYILQILESCHIGAEYGLRILIDKSLVFISEYNQV 485
Query: 60 TMHDLLQEMGREVVKQESVNNPGERSRLWHYEDIIEVLTFNTGTEKIEGICFDMSKVKQI 119
MHDL+Q+MG+ +V + +PGERSRLW +++ EV++ NTGT +E I S +
Sbjct: 486 QMHDLIQDMGKYIVNFQ--KDPGERSRLWLAKEVEEVMSNNTGTMAMEAIWVS-SYSSTL 542
Query: 120 GLNLDTFTKMHKLRFLKFYNSISEGKSKCMVSNCQGPILAKVRYFHWDGYPLTSLPSNIY 179
+ M +LR S + + +N +R F YP S PS
Sbjct: 543 RFSNQAVKNMKRLRVFNMGRSSTHYAIDYLPNN--------LRCFVCTNYPWESFPSTFE 594
Query: 180 PDKLVFLEIPDSNIEQLW 197
LV L++ +++ LW
Sbjct: 595 LKMLVHLQLRHNSLRHLW 612
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 110/204 (53%), Gaps = 20/204 (9%)
Query: 1 SFDDLDDEEKNIFLDIVCFFKREDKDFIIKFLNACGFDAQIGISDLVNKSLI-VIHNNQI 59
S+D L +++++FL I C F + ++ L +G + L KSLI + + I
Sbjct: 418 SYDRLHQKDQDMFLYIACLFNGFEVSYVKDLLKD-----NVGFTMLTEKSLIRITPDGYI 472
Query: 60 TMHDLLQEMGREVVKQESVNNPGERSRLWHYEDIIEVLTFNTGTEKIEGICFDMSK---V 116
MH+LL+++GRE+ + +S NPG+R L ++EDI EV+T TGTE + GI +
Sbjct: 473 EMHNLLEKLGREIDRAKSKGNPGKRRFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFST 532
Query: 117 KQIGLNLDTFTKMHKLRFLK--FYNSISEGKSKCMVSNCQGPILAKVRYFHWDGYPLTSL 174
+ + ++ ++F M L++L+ +Y + + S P+ K+R WD PL SL
Sbjct: 533 RPLLIDKESFKGMRNLQYLEIGYYGDLPQ-------SLVYLPL--KLRLLDWDDCPLKSL 583
Query: 175 PSNIYPDKLVFLEIPDSNIEQLWD 198
PS + LV L + S +E+LW+
Sbjct: 584 PSTFKAEYLVNLIMKYSKLEKLWE 607
>sp|Q9FKN7|DAR4_ARATH Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2
Length = 1613
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 1 SFDDLDDEEKNIFLDIVCFFKREDKDFIIKFLNACGFDAQIGISDLVNKSLIVIHNNQIT 60
++ L D EKNI LDI FFK E +++++ L + ++ I LV+K ++ I N +
Sbjct: 403 AYSALSDNEKNIVLDIAFFFKGETVNYVMQLLEESHYFPRLAIDVLVDKCVLTISENTVQ 462
Query: 61 MHDLLQEMGREVVKQESVNNPGERSRLWHYEDIIEVLTFN----TG-----------TEK 105
M++L+Q+ +E+ E +R+W I +L ++ +G E
Sbjct: 463 MNNLIQDTCQEIFNGEIETC----TRMWEPSRIRYLLEYDELEGSGETKAMPKSGLVAEH 518
Query: 106 IEGICFDMSKVKQIGLNLDTFTKMHKLRFLKFYNSISEGKSKCMVSNCQGPILAKVRYFH 165
IE I D S VK + D F M L+FLK YNS S+ S + ++R H
Sbjct: 519 IESIFLDTSNVK-FDVKHDAFKNMFNLKFLKIYNSCSKYISGLNFPKGLDSLPYELRLLH 577
Query: 166 WDGYPLTSLPSNIYPDKLVFLEIPDSNIEQL 196
W+ YPL SLP + LV L +P S + +L
Sbjct: 578 WENYPLQSLPQDFDFGHLVKLSMPYSQLHKL 608
>sp|O13917|HPRT_SCHPO Hypoxanthine-guanine phosphoribosyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=hpt1 PE=3 SV=1
Length = 206
Score = 31.2 bits (69), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 39 AQIGISDLVNKSLIVIH---NNQITMHDLLQEMGREVVKQ-ESVNNPGERS 85
+ +G+ DLV K+++++ + + T+H L+E+ R+V +Q + +N GE++
Sbjct: 94 STLGMVDLVGKNILIVDEVDDTRTTLHYALRELQRDVAEQAKKLNREGEKT 144
>sp|Q04562|TMN2_YEAST Transmembrane 9 superfamily member 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TMN2 PE=1 SV=1
Length = 672
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 37 FDAQIGISDLVNKSLIVIHNNQITMHDLLQEMGREVVKQESVN 79
+D QI L+N S+IVI + + MH LL+ + ++ + +N
Sbjct: 304 YDPQIQWFSLINFSVIVILLSSVVMHSLLRALKSDLARYNELN 346
>sp|Q7V1D3|RUVA_PROMP Holliday junction ATP-dependent DNA helicase RuvA
OS=Prochlorococcus marinus subsp. pastoris (strain
CCMP1986 / MED4) GN=ruvA PE=3 SV=1
Length = 219
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 19 FFKREDKDFIIKFLNACGFDAQIGISDL----VNKSLIVIHNNQITMHDLLQEMGREVVK 74
F ++ +DF I+ LN G +QIG+S L +N+ + I NN +Q +G+++ +
Sbjct: 70 FSTKDQRDFFIQILNIKGIGSQIGMSLLNKFSLNQLITAISNNDKKSISTVQGIGQKMTE 129
Query: 75 Q 75
+
Sbjct: 130 R 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.141 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,556,010
Number of Sequences: 539616
Number of extensions: 3000310
Number of successful extensions: 6391
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 6365
Number of HSP's gapped (non-prelim): 13
length of query: 198
length of database: 191,569,459
effective HSP length: 111
effective length of query: 87
effective length of database: 131,672,083
effective search space: 11455471221
effective search space used: 11455471221
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)