Your job contains 1 sequence.
>046173
MGCFDFYDDVKRHWDRFKKWLTENFPEAKATLRKGASEADIQELEKSLKVKLPVPTRILY
RFCDGQECQTDDFESIGSMGLIGGYSFYGHLVNVYLIPLSHIIMETKEIRRQLHFPGRDK
YVVLASSSTYSEKFFFLNCTNGQLYVGTKNLLSDGEIIPCVPNALISLGHSFNSDQQQDL
CCYEENFKFINLFPEEPSHCSIAVTNGMNTCLRIQFTSLLPEGCIINGMTFSSCLLQHRH
WVIHAYNVVLSDVSGEAVIGMSCTPLPGSSGSVRGSLMFVPARLADPKGSPFEVEVAEFP
LQQPDYIF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046173
(308 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2198826 - symbol:SKIP16 "SKP1/ASK-interacting ... 505 1.1e-74 2
ZFIN|ZDB-GENE-050522-269 - symbol:fbxo3 "F-box protein 3"... 124 3.4e-06 2
UNIPROTKB|A6H7H7 - symbol:FBXO3 "F-box only protein 3" sp... 120 9.1e-05 2
UNIPROTKB|Q9UK99 - symbol:FBXO3 "F-box only protein 3" sp... 120 9.2e-05 2
RGD|1593433 - symbol:Fbxo3 "F-box protein 3" species:1011... 115 0.00028 2
MGI|MGI:1929084 - symbol:Fbxo3 "F-box protein 3" species:... 112 0.00062 2
>TAIR|locus:2198826 [details] [associations]
symbol:SKIP16 "SKP1/ASK-interacting protein 16"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IPI] [GO:0019243 "methylglyoxal
catabolic process to D-lactate" evidence=RCA] PROSITE:PS50181
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0016567 EMBL:AC024174 GO:GO:0019005 HSSP:Q7VU61
Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 KO:K10290 EMBL:AF419599
EMBL:AY099571 EMBL:BT002142 IPI:IPI00545043 PIR:D86196
RefSeq:NP_563759.1 UniGene:At.15468 ProteinModelPortal:Q9LND7
SMR:Q9LND7 IntAct:Q9LND7 STRING:Q9LND7 PaxDb:Q9LND7 PRIDE:Q9LND7
EnsemblPlants:AT1G06110.1 GeneID:837120 KEGG:ath:AT1G06110
TAIR:At1g06110 eggNOG:NOG296925 HOGENOM:HOG000243753
InParanoid:Q9LND7 OMA:VNVYLLP PhylomeDB:Q9LND7
ProtClustDB:CLSN2687703 Genevestigator:Q9LND7 Uniprot:Q9LND7
Length = 436
Score = 505 (182.8 bits), Expect = 1.1e-74, Sum P(2) = 1.1e-74
Identities = 113/218 (51%), Positives = 139/218 (63%)
Query: 10 VKRHWDRFKKWLTENFPEAKATLRKGASEADIQELEKSLKVKLPVPTRILYRFCDGQECQ 69
V+ WD K+WLT NFPEAKATLRKG +E D+QE E SLKVKLP+PTR+LYRF DGQE
Sbjct: 89 VRLCWDNLKQWLTLNFPEAKATLRKGVTEDDLQEFETSLKVKLPLPTRLLYRFVDGQELS 148
Query: 70 TDDFESIGSMGLIGGYSFYGHLVNVYLIPLSHIIMETKE-IRRQLHFPGRDKYVVLASSS 128
+ + GS+GLIGGYS Y H VNVYL+PL ++ ETKE R L F R +V+A+S
Sbjct: 149 SPNGLD-GSLGLIGGYSAYSHDVNVYLLPLKEVMRETKESFMRDLGFSSRLDLIVMAASV 207
Query: 129 TYSEKFFFLNCTNGQLYVGTKNLLSDGEIIPCVPNALISLGHSFNSDQQQD--LCCYEE- 185
S K F L+CT GQL+ GT N +++PCVP+AL+ H N DQQQD L EE
Sbjct: 208 VASLKIFLLDCTTGQLFTGTSNR----QLLPCVPDALVRSVHDTNGDQQQDAMLLWLEEH 263
Query: 186 ---------------NFKFINLFPEEPSHCSIAVTNGM 208
N K I+LFPE P CS++VTNG+
Sbjct: 264 GRRLQTGTINVRQQNNVKSISLFPEIPPLCSVSVTNGV 301
Score = 267 (99.0 bits), Expect = 1.1e-74, Sum P(2) = 1.1e-74
Identities = 57/105 (54%), Positives = 68/105 (64%)
Query: 218 SLLPEGCIINGMTFSSCLLQHRHWVIHAYNVVLSDVSGEAVIGM--------------SC 263
SL+PEGCI+NG SSC L RHWVI A N V+ +V+GEAVIG SC
Sbjct: 332 SLMPEGCILNGTHHSSCQLYWRHWVIRADNEVIDNVNGEAVIGKYPLLQAGEEEFVYESC 391
Query: 264 TPLPGSSGSVRGSLMFVPARLADPKGSPFEVEVAEFPLQQPDYIF 308
+ P ++GS+ GS FVP L DPKGS FEV+V EFPL+ PDYIF
Sbjct: 392 SSFPTTAGSIDGSFTFVPGSLRDPKGSQFEVKVVEFPLELPDYIF 436
>ZFIN|ZDB-GENE-050522-269 [details] [associations]
symbol:fbxo3 "F-box protein 3" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:BX957256 IPI:IPI00504452
Ensembl:ENSDART00000139382 ZFIN:ZDB-GENE-050522-269
GeneTree:ENSGT00390000009225 Bgee:F1R287 Gene3D:2.60.40.1470
InterPro:IPR007474 InterPro:IPR018958 InterPro:IPR001810
Pfam:PF04379 SMART:SM00256 SMART:SM00860 SUPFAM:SSF110069
SUPFAM:SSF81383 PROSITE:PS51087 PROSITE:PS50181 Uniprot:F1R287
Length = 451
Score = 124 (48.7 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 4 FDFYDDVKRHWDRFKKWLTENFPEAKATLRKGASEADIQELEKSLKVKLPVPTRILYRFC 63
FD+Y +K+ WD K +L + P A+L++G E ++ +E + KLP R YR
Sbjct: 86 FDYYSTLKKAWDDLKNFLNQKCPRMIASLKEGVREDELDTIEAQIGCKLPNDYRCSYRIH 145
Query: 64 DGQECQTDDFESIGSMGLIGGY 85
+GQ+ +GSM L Y
Sbjct: 146 NGQKLVVPGL--MGSMALSNHY 165
Score = 52 (23.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 233 SCLLQHRHWVIHAYNVVLSDVSGEAVIGMSCTPLPG 268
+C L R+W I N + +V G V+G PG
Sbjct: 319 ACQLDSRYWKITNANGNVEEVRGPGVVGEFPVMTPG 354
>UNIPROTKB|A6H7H7 [details] [associations]
symbol:FBXO3 "F-box only protein 3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 GO:GO:0005634 SUPFAM:SSF81383
eggNOG:COG2967 Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 EMBL:BC146250 IPI:IPI00690261
RefSeq:NP_001092532.1 UniGene:Bt.91417 ProteinModelPortal:A6H7H7
Ensembl:ENSBTAT00000013287 GeneID:534287 KEGG:bta:534287 CTD:26273
GeneTree:ENSGT00390000009225 HOGENOM:HOG000232174
HOVERGEN:HBG005647 InParanoid:A6H7H7 KO:K10290 OMA:DLGRYIQ
OrthoDB:EOG4GF3F9 NextBio:20876340 InterPro:IPR018958 SMART:SM00860
Uniprot:A6H7H7
Length = 469
Score = 120 (47.3 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 5 DFYDDVKRHWDRFKKWLTENFPEAKATLRKGASEADIQELEKSLKVKLPVPTRILYRFCD 64
D Y +K+ WD KK+L P +L++GA E D+ +E + KLP R YR +
Sbjct: 91 DHYAAIKKAWDDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHN 150
Query: 65 GQECQTDDFESIGSMGLIGGY 85
GQ+ +GSM L Y
Sbjct: 151 GQKLVVPGL--LGSMALSNHY 169
Score = 43 (20.2 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 233 SCLLQHRHWVIHAYNVVLSDVSGEAVIG 260
+C L R+W I + +V G V+G
Sbjct: 323 ACQLDSRYWRITNAKGDVEEVQGPGVVG 350
>UNIPROTKB|Q9UK99 [details] [associations]
symbol:FBXO3 "F-box only protein 3" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0006508
"proteolysis" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016567 "protein ubiquitination" evidence=TAS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
GO:GO:0005634 Reactome:REACT_6900 EMBL:CH471064 GO:GO:0006508
SUPFAM:SSF81383 GO:GO:0004842 eggNOG:COG2967 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
CTD:26273 HOGENOM:HOG000232174 HOVERGEN:HBG005647 KO:K10290
OMA:DLGRYIQ OrthoDB:EOG4GF3F9 InterPro:IPR018958 SMART:SM00860
EMBL:AK001943 EMBL:AK128454 EMBL:AL136625 EMBL:AC113192
EMBL:AL049629 EMBL:BC046110 EMBL:AF176702 IPI:IPI00296789
IPI:IPI00472624 IPI:IPI00969390 RefSeq:NP_036307.2
RefSeq:NP_208385.1 UniGene:Hs.406787 ProteinModelPortal:Q9UK99
SMR:Q9UK99 IntAct:Q9UK99 STRING:Q9UK99 PhosphoSite:Q9UK99
DMDM:145559474 PaxDb:Q9UK99 PRIDE:Q9UK99 DNASU:26273
Ensembl:ENST00000265651 Ensembl:ENST00000448981
Ensembl:ENST00000530401 GeneID:26273 KEGG:hsa:26273 UCSC:uc001muy.3
UCSC:uc001mva.1 UCSC:uc001mvb.1 GeneCards:GC11M033762
HGNC:HGNC:13582 MIM:609089 neXtProt:NX_Q9UK99 PharmGKB:PA28040
InParanoid:Q9UK99 PhylomeDB:Q9UK99 GenomeRNAi:26273 NextBio:48571
ArrayExpress:Q9UK99 Bgee:Q9UK99 CleanEx:HS_FBXO3
Genevestigator:Q9UK99 GermOnline:ENSG00000110429 Uniprot:Q9UK99
Length = 471
Score = 120 (47.3 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 5 DFYDDVKRHWDRFKKWLTENFPEAKATLRKGASEADIQELEKSLKVKLPVPTRILYRFCD 64
D Y +K+ WD KK+L P +L++GA E D+ +E + KLP R YR +
Sbjct: 91 DHYAAIKKAWDDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHN 150
Query: 65 GQECQTDDFESIGSMGLIGGY 85
GQ+ +GSM L Y
Sbjct: 151 GQKLVVPGL--LGSMALSNHY 169
Score = 43 (20.2 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 233 SCLLQHRHWVIHAYNVVLSDVSGEAVIG 260
+C L R+W I + +V G V+G
Sbjct: 323 ACQLDSRYWRITNAKGDVEEVQGPGVVG 350
>RGD|1593433 [details] [associations]
symbol:Fbxo3 "F-box protein 3" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 RGD:1593433 GO:GO:0005634
SUPFAM:SSF81383 Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 EMBL:CH473949 CTD:26273
GeneTree:ENSGT00390000009225 KO:K10290 OMA:DLGRYIQ
OrthoDB:EOG4GF3F9 InterPro:IPR018958 SMART:SM00860 IPI:IPI00210722
RefSeq:NP_001103076.1 UniGene:Rn.201745 PRIDE:D4ABP9
Ensembl:ENSRNOT00000014478 GeneID:690634 KEGG:rno:690634
UCSC:RGD:1593433 NextBio:741350 Uniprot:D4ABP9
Length = 480
Score = 115 (45.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 7 YDDVKRHWDRFKKWLTENFPEAKATLRKGASEADIQELEKSLKVKLPVPTRILYRFCDGQ 66
Y +K+ WD KK+L P +L++GA E D+ +E + KLP R YR +GQ
Sbjct: 93 YAAIKKAWDDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQ 152
Query: 67 ECQTDDFESIGSMGLIGGY 85
+ +GSM L Y
Sbjct: 153 KLVVPGL--LGSMALSNHY 169
Score = 44 (20.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 21/87 (24%), Positives = 31/87 (35%)
Query: 233 SCLLQHRHWVIHAYNVVLSDVSGEAVIG-------------MSCTPLPGSSGSVRGSLMF 279
+C L R+W I + +V G V+G SCT +SG + G F
Sbjct: 323 ACQLDSRYWRITNAKGDVEEVQGPGVVGEFPIISPGRIYEYTSCTTFSTTSGYMEGYYTF 382
Query: 280 VPARLADPKGSPFEVEVAEFPLQQPDY 306
K F V + F + P +
Sbjct: 383 ---HFLYFKDKVFNVAIPRFHMACPTF 406
>MGI|MGI:1929084 [details] [associations]
symbol:Fbxo3 "F-box protein 3" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1929084 GO:GO:0005634
SUPFAM:SSF81383 EMBL:CH466519 eggNOG:COG2967 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
EMBL:BX640578 CTD:26273 GeneTree:ENSGT00390000009225
HOVERGEN:HBG005647 KO:K10290 OMA:DLGRYIQ OrthoDB:EOG4GF3F9
InterPro:IPR018958 SMART:SM00860 EMBL:AF233226 EMBL:AK004544
EMBL:AK019550 EMBL:AK028048 EMBL:AK031428 EMBL:AK049870
EMBL:AK050195 EMBL:AK151130 EMBL:AK151857 EMBL:AK152780
EMBL:AK167075 EMBL:BC010212 EMBL:BC058253 IPI:IPI00120202
IPI:IPI00410808 IPI:IPI00753481 RefSeq:NP_065618.1
RefSeq:NP_997598.1 UniGene:Mm.143768 ProteinModelPortal:Q9DC63
SMR:Q9DC63 STRING:Q9DC63 PhosphoSite:Q9DC63 PaxDb:Q9DC63
PRIDE:Q9DC63 Ensembl:ENSMUST00000028603 Ensembl:ENSMUST00000102565
Ensembl:ENSMUST00000111135 GeneID:57443 KEGG:mmu:57443
UCSC:uc008lji.1 UCSC:uc008ljk.1 InParanoid:Q3U9C1 ChiTaRS:FBXO3
NextBio:313845 Bgee:Q9DC63 CleanEx:MM_FBXO3 Genevestigator:Q9DC63
GermOnline:ENSMUSG00000027180 Uniprot:Q9DC63
Length = 480
Score = 112 (44.5 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 27/81 (33%), Positives = 39/81 (48%)
Query: 5 DFYDDVKRHWDRFKKWLTENFPEAKATLRKGASEADIQELEKSLKVKLPVPTRILYRFCD 64
D Y +K+ W KK+L P +L++GA E D+ +E + KLP R YR +
Sbjct: 91 DHYAAIKKAWRDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHN 150
Query: 65 GQECQTDDFESIGSMGLIGGY 85
GQ+ +GSM L Y
Sbjct: 151 GQKLVVPGL--LGSMALSNHY 169
Score = 44 (20.5 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 21/87 (24%), Positives = 31/87 (35%)
Query: 233 SCLLQHRHWVIHAYNVVLSDVSGEAVIG-------------MSCTPLPGSSGSVRGSLMF 279
+C L R+W I + +V G V+G SCT +SG + G F
Sbjct: 323 ACQLDSRYWRITNAKGDVEEVQGPGVVGEFPIISPGRIYEYTSCTTFSTTSGYMEGYYTF 382
Query: 280 VPARLADPKGSPFEVEVAEFPLQQPDY 306
K F V + F + P +
Sbjct: 383 ---HFLYFKDKVFNVAIPRFHMACPTF 406
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.437 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 308 308 0.00078 116 3 11 22 0.36 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 607 (65 KB)
Total size of DFA: 238 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.75u 0.09s 24.84t Elapsed: 00:00:01
Total cpu time: 24.75u 0.09s 24.84t Elapsed: 00:00:01
Start: Fri May 10 23:47:17 2013 End: Fri May 10 23:47:18 2013