Your job contains 1 sequence.
>046178
MEDLIISPSSSSSLVSLTPETPPPTLQQRLQFIVQSQPEWWAYAIFWQTISNDDNGQLFL
AWGDGHYQGTKDASPRARMSMPAPAPGAALDNNMERKRAISSIRGIQQSFMGHEMDLSMM
DGGDVTDTEWFYVMSLTRSFGAGVGIPGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHG
IETFVCIPTSCGVLELGSSDLIRENWGLVHQVKSLFGSDLITKPLNPNPTPAAPPMHFLD
RNISFADIGIIAGVQQEQEEEEEEEEELSRPEEEDQNKVKKPRKDQGCTVKSSTGQSSYT
VDSEHSDSDCPLPPPVNNISAVEKRTPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFY
ALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRESKKVKLEISDNHSTTTS
VDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASM
SCVNDLMLQDIVVRVPDGLRTEDALRSALLRRLDQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046178
(515 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 463 1.5e-79 3
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 443 1.8e-76 2
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 410 1.1e-72 2
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 397 8.2e-71 2
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 413 5.0e-69 2
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 374 2.3e-64 2
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 241 4.7e-38 2
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 239 3.0e-36 2
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 231 4.5e-33 2
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 229 7.7e-30 3
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 229 2.9e-29 2
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 212 3.3e-26 2
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 220 3.7e-26 2
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 286 3.6e-25 1
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 193 1.5e-23 2
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 262 2.4e-22 1
TAIR|locus:2127023 - symbol:ATMYC1 species:3702 "Arabidop... 194 1.7e-20 2
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 213 1.2e-15 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 205 4.4e-14 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 200 1.2e-13 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 200 1.4e-13 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 194 2.2e-12 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 186 3.4e-12 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 156 9.6e-12 2
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 188 1.2e-11 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 175 1.4e-10 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 152 2.7e-10 2
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 165 5.5e-10 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 162 3.0e-09 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 163 3.5e-09 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 163 3.7e-09 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 164 3.8e-09 1
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 123 5.4e-09 2
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 158 7.8e-09 2
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 156 1.1e-08 1
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 155 1.6e-08 1
TAIR|locus:2207061 - symbol:AT1G72210 "AT1G72210" species... 155 1.9e-08 1
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 115 2.9e-08 2
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 153 3.1e-08 1
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 101 5.7e-08 2
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 150 6.7e-08 1
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 153 6.9e-08 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 154 8.1e-08 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 148 9.2e-08 1
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 143 1.0e-07 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 147 1.4e-07 1
TAIR|locus:2168235 - symbol:AT5G65320 "AT5G65320" species... 145 2.1e-07 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 146 2.5e-07 1
UNIPROTKB|Q5SMX2 - symbol:P0498B01.25 "Basic helix-loop-h... 147 2.7e-07 1
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 146 2.8e-07 1
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 134 4.8e-07 2
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 106 5.8e-07 2
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 137 7.5e-07 1
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 104 7.9e-07 2
UNIPROTKB|Q8H8H9 - symbol:OJ1126B12.2 "Helix-loop-helix D... 138 1.3e-06 1
UNIPROTKB|Q5JNS0 - symbol:P0706B05.43 "Os01g0293100 prote... 137 1.3e-06 2
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 132 1.5e-06 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 138 1.6e-06 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 139 2.0e-06 1
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 137 2.7e-06 1
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 125 4.3e-06 2
UNIPROTKB|Q7F7Z2 - symbol:Os01g0159800 "ESTs C26093(C1162... 132 4.3e-06 1
UNIPROTKB|Q7XLY9 - symbol:OSJNBa0086O06.20 "OSJNBa0086O06... 118 4.6e-06 2
UNIPROTKB|Q5SMX4 - symbol:P0498B01.36 "cDNA clone:J033115... 136 5.1e-06 1
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 134 6.3e-06 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 105 9.3e-06 2
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 121 1.4e-05 1
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 128 2.5e-05 1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 125 2.6e-05 1
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 107 2.8e-05 1
UNIPROTKB|Q5N9E6 - symbol:P0505D12.13 "BHLH transcription... 132 2.9e-05 2
UNIPROTKB|Q8S0C6 - symbol:B1112D09.6 "Uncharacterized pro... 129 3.2e-05 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 125 5.5e-05 1
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 125 6.0e-05 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 119 6.7e-05 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 123 6.8e-05 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 124 7.9e-05 1
UNIPROTKB|Q9FTQ1 - symbol:P0665D10.21 "DNA binding protei... 121 8.6e-05 1
TAIR|locus:2063203 - symbol:AT2G41130 "AT2G41130" species... 120 9.8e-05 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 118 0.00011 1
TAIR|locus:2146663 - symbol:BHLH101 "AT5G04150" species:3... 119 0.00011 1
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 113 0.00011 3
TAIR|locus:2012146 - symbol:RGE1 "AT1G49770" species:3702... 120 0.00016 1
UNIPROTKB|Q75IR0 - symbol:OSJNBb0099P06.13 "Putative unch... 118 0.00020 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 119 0.00021 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 119 0.00021 1
TAIR|locus:2164605 - symbol:AT5G56960 "AT5G56960" species... 121 0.00025 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 120 0.00031 1
TAIR|locus:2040287 - symbol:BHLH100 "basic helix-loop-hel... 115 0.00033 1
UNIPROTKB|Q6K4B1 - symbol:OJ1595_D08.4 "Os09g0468700 prot... 101 0.00033 2
UNIPROTKB|Q657D1 - symbol:P0697C12.40 "BHLH transcription... 120 0.00035 1
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 117 0.00039 1
UNIPROTKB|Q75KV9 - symbol:OJ1365_D05.18 "Putative helix-l... 116 0.00042 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 119 0.00050 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 117 0.00056 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 117 0.00062 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 116 0.00063 1
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 117 0.00070 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 112 0.00071 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 118 0.00073 1
WARNING: Descriptions of 1 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 463 (168.0 bits), Expect = 1.5e-79, Sum P(3) = 1.5e-79
Identities = 93/164 (56%), Positives = 130/164 (79%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQ 401
L+HVEAE+QRREKLNHRFYALRA+VP VSRMDKASLLSDAVSYI LK KIDDLE+++ +
Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKK 307
Query: 402 RESKKV-KLEISDNHSTTTSVD-QARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVNH 459
+ + KL+ S ++++ +SV+ Q + S G +LEV+ KI+G +A+IRVQ+ENVNH
Sbjct: 308 MKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVGEEAIIRVQTENVNH 367
Query: 460 PAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDGLRTED 503
P + LMS+L ++D ++ HA+ S ++ +M+QD+VV VP+GLR+ED
Sbjct: 368 PTSALMSALMEMDCRVQHANASRLSQVMVQDVVVLVPEGLRSED 411
Score = 230 (86.0 bits), Expect = 1.5e-79, Sum P(3) = 1.5e-79
Identities = 54/118 (45%), Positives = 73/118 (61%)
Query: 107 QQSFMGHEMDLS-MMDGGDVTDTEWFYVMSLTRSFGAGVGIPGRAQSSGSLVWLTGSHEL 165
Q+++ + ++ MMDGGD D E FY S +G P + S SLVWLTG EL
Sbjct: 85 QENYTTNSIECELMMDGGD--DLELFYAASF---YGEDRS-PRKEVSDESLVWLTGPDEL 138
Query: 166 QFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLIRENWGLVHQVKSLFGSDLITK 223
+F N ERAKEA HG+ T V IP + G++ELGSS+ I +N +++VKS+FGS TK
Sbjct: 139 RFSNYERAKEAGFHGVHTLVSIPINNGIIELGSSESIIQNRNFINRVKSIFGSGKTTK 196
Score = 138 (53.6 bits), Expect = 1.5e-79, Sum P(3) = 1.5e-79
Identities = 21/46 (45%), Positives = 34/46 (73%)
Query: 27 QQRLQFIVQSQPEWWAYAIFWQTISNDDNGQLFLAWGDGHYQGTKD 72
QQ+L+F+V++ P+ WAY IFWQ + +D + + +L W DGH+ G K+
Sbjct: 36 QQKLRFVVETSPDRWAYVIFWQKMFDDQSDRSYLVWVDGHFCGNKN 81
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 443 (161.0 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
Identities = 94/167 (56%), Positives = 124/167 (74%)
Query: 339 ETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQ 398
E PLNHVEAERQRREKLN RFYALRAVVPNVS+MDKASLL DA++YI ELK K+ ES+
Sbjct: 448 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESE 507
Query: 399 LLQ--RESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSEN 456
LQ + ++VKLE++ ++ + D + SS S +E+E KI+G DAMIRV+S
Sbjct: 508 KLQIKNQLEEVKLELAGRKASASGGDMS--SSCSSIKPVGMEIEVKIIGWDAMIRVESSK 565
Query: 457 VNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDGLRTED 503
NHPAA+LMS+L DL+L+++HASMS VNDLM+Q V++ + T++
Sbjct: 566 RNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYTQE 612
Score = 346 (126.9 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
Identities = 72/193 (37%), Positives = 113/193 (58%)
Query: 27 QQRLQFIVQSQPEWWAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDXXXXXXXXXXXXXX 86
QQRLQ +++ E W YAIFWQ S D +G L WGDG+Y+G +D
Sbjct: 69 QQRLQALIEGTHEGWTYAIFWQP-SYDFSGASVLGWGDGYYKGEEDKANPRRRSSSPPFS 127
Query: 87 XXXLDNNMERKRAISSIRGIQQSFMGHEMDLSMMDGGDVTDTEWFYVMSLTRSFGAGVGI 146
D RK+ + + + + D +D +VTDTEWF+++S+T+SF G G+
Sbjct: 128 TPA-DQEY-RKKVLRELNSLISGGVAPSDDA--VDE-EVTDTEWFFLVSMTQSFACGAGL 182
Query: 147 PGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLIRENW 206
G+A ++G+ VW++GS +L CERAK+ G+ T CIP++ GV+E+GS++ IR++
Sbjct: 183 AGKAFATGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPSANGVVEVGSTEPIRQSS 242
Query: 207 GLVHQVKSLFGSD 219
L+++V+ LF D
Sbjct: 243 DLINKVRILFNFD 255
Score = 41 (19.5 bits), Expect = 7.0e-33, Sum P(2) = 7.0e-33
Identities = 27/143 (18%), Positives = 55/143 (38%)
Query: 316 VNNISAVEXXXXXXXXXXXXXXXETPLNHVEAER-QRREKLNHRFYALRAVVPNVSRMDK 374
V N+S ++ ++ + E+E+ Q + +L L + S D
Sbjct: 475 VPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQLEEVKLELAGRKASASGGDM 534
Query: 375 ASLLSDAVSYIRELKVKIDDLESQLLQRESKK-----------VKLEISDNHSTTTSVDQ 423
+S S E++VKI ++ + SK+ + LE+ NH++ + V+
Sbjct: 535 SSSCSSIKPVGMEIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVND 594
Query: 424 ARPSSAGSGGGFNLEVETKIMGS 446
A GF + + ++ S
Sbjct: 595 LMIQQATVKMGFRIYTQEQLRAS 617
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 410 (149.4 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 99/229 (43%), Positives = 135/229 (58%)
Query: 277 NKVKKPRKDQGCTVKSSTGQSSYTVDSEHSDSDCPLPPPV-NNISAVEXXXXXXXXXXX- 334
NK + P + + S T S DS HSD + + +N VE
Sbjct: 350 NKKRSPVSNNEEGMLSFT--SVLPCDSNHSDLEASVAKEAESNRVVVEPEKKPRKRGRKP 407
Query: 335 XXXXETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDD 394
E PLNHVEAERQRREKLN RFY+LRAVVPNVS+MDKASLL DA+SYI ELK K+
Sbjct: 408 ANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQK 467
Query: 395 LESQLLQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQS 454
ES + + K++ + + + +SV + + S +EV+ KI+G DAMIR+Q
Sbjct: 468 AESDKEELQ-KQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQC 526
Query: 455 ENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDGLRTED 503
NHP AK M +L++LDL+++HAS+S VNDLM+Q V++ + T+D
Sbjct: 527 SKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKMGNQFFTQD 575
Score = 343 (125.8 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 73/198 (36%), Positives = 114/198 (57%)
Query: 27 QQRLQFIVQSQPEWWAYAIFWQTI------SNDDNGQLFLAWGDGHYQGTKDXXXXXXXX 80
QQRLQ +++ E W YA+FWQ+ N++N + L WGDG+Y+G ++
Sbjct: 64 QQRLQALIEGANENWTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYKGEEEKSRKKKSN 123
Query: 81 XXXXXXXXXLDNNMERKRAISSIRGIQQSFMGHEMDLSMMDGGD--VTDTEWFYVMSLTR 138
RKR I + + +G D + GD VTDTEWF+++S+T+
Sbjct: 124 PASAA------EQEHRKRVIRELNSLISGGVGGG-D----EAGDEEVTDTEWFFLVSMTQ 172
Query: 139 SFGAGVGIPGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGS 198
SF G G+PG+A S+ +WL+GS+ L +CERA++ Q +G++T VC+ T GV+ELGS
Sbjct: 173 SFVKGTGLPGQAFSNSDTIWLSGSNALAGSSCERARQGQIYGLQTMVCVATENGVVELGS 232
Query: 199 SDLIRENWGLVHQVKSLF 216
S++I ++ LV +V + F
Sbjct: 233 SEIIHQSSDLVDKVDTFF 250
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 397 (144.8 bits), Expect = 8.2e-71, Sum P(2) = 8.2e-71
Identities = 92/219 (42%), Positives = 129/219 (58%)
Query: 280 KKPRKDQGCTVKSSTGQSSYTVDSEHSDSDCPLPPPVNNISAVEXXXXXXXXXXXXXXXE 339
K D+G + ST S DS+HSD + + + E E
Sbjct: 354 KGSNNDEGM-LSFSTVVRSAANDSDHSDLEASVVKEAIVVEPPEKKPRKRGRKPANGREE 412
Query: 340 TPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLES-- 397
PLNHVEAERQRREKLN RFY+LRAVVPNVS+MDKASLL DA+SYI ELK K+ ES
Sbjct: 413 -PLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDK 471
Query: 398 QLLQRESKKVKLEISDNHSTTTSVDQARPSSAGS-GGGFNLEVETKIMGSDAMIRVQSEN 456
+ +Q++ + E ++ + + + S+ S +E++ KI+G D MIRVQ
Sbjct: 472 EEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGK 531
Query: 457 VNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRV 495
+HP A+ M +L++LDL+++HAS+S VNDLM+Q V++
Sbjct: 532 KDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKM 570
Score = 342 (125.4 bits), Expect = 8.2e-71, Sum P(2) = 8.2e-71
Identities = 79/196 (40%), Positives = 115/196 (58%)
Query: 27 QQRLQFIVQSQPEWWAYAIFWQTISND------DNGQLFLAWGDGHYQGTKDXXXXXXXX 80
QQRLQ +++S E W YAIFWQ IS+D DN + L WGDG+Y+G +D
Sbjct: 53 QQRLQALIESAGENWTYAIFWQ-ISHDFDSSTGDN-TVILGWGDGYYKGEEDKEKKKNNT 110
Query: 81 XXXXXXXXXLDNNMERKRAISSIRGIQQSFMGHEMDLSMMDGGDVTDTEWFYVMSLTRSF 140
RKR I + + +G D S + +VTDTEWF+++S+T+SF
Sbjct: 111 NTA--------EQEHRKRVIRELNSLISGGIGVS-DES--NDEEVTDTEWFFLVSMTQSF 159
Query: 141 GAGVGIPGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSD 200
GVG+PG + + ++WL+GS L CERA + Q +G++T VCI T GV+ELGSS+
Sbjct: 160 VNGVGLPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNGVVELGSSE 219
Query: 201 LIRENWGLVHQVKSLF 216
+I ++ L+H+V +LF
Sbjct: 220 VISQSSDLMHKVNNLF 235
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 413 (150.4 bits), Expect = 5.0e-69, Sum P(2) = 5.0e-69
Identities = 90/170 (52%), Positives = 117/170 (68%)
Query: 339 ETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLES- 397
E PLNHVEAERQRREKLN RFYALRAVVPNVS+MDKASLL DA+SYI EL+ K+ LE+
Sbjct: 520 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTALETD 579
Query: 398 -QLLQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFN---LEVETKIMGSDAMIRVQ 453
+ LQ + + +K E PS G GG +E+E KI+G +AMIRVQ
Sbjct: 580 KETLQSQMESLKKE--------RDARPPAPSGGGGDGGARCHAVEIEAKILGLEAMIRVQ 631
Query: 454 SENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDGLRTED 503
NHPAA+LM++LR+LDL ++HAS+S V DLM+Q + V++ + ++D
Sbjct: 632 CHKRNHPAARLMTALRELDLDVYHASVSVVKDLMIQQVAVKMASRVYSQD 681
Score = 317 (116.6 bits), Expect = 5.0e-69, Sum P(2) = 5.0e-69
Identities = 68/191 (35%), Positives = 106/191 (55%)
Query: 27 QQRLQFIVQSQPEWWAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDXXXXXXXXXXXXXX 86
QQRLQ I++ E W YAIFWQ+ + G L WGDG+Y+G D
Sbjct: 69 QQRLQSIIEGSRETWTYAIFWQSSIDVSTGASLLGWGDGYYKGCDDDKRKQRSSTPAAAA 128
Query: 87 XXXLDNNMERKRAISSIRGIQQSFMGHEMDLSMMDGGDVTDTEWFYVMSLTRSFGAGVGI 146
RKR + + + G D ++ + +VTDTEWF+++S+T+SF G+G+
Sbjct: 129 -----EQEHRKRVLRELNSLIAG-AGAAPDEAVEE--EVTDTEWFFLVSMTQSFPNGLGL 180
Query: 147 PGRAQSSGSLVWL-TGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLIREN 205
PG+A + W+ TG L C+RA++A + G+ T VC+P + GVLELGS+D+I +
Sbjct: 181 PGQALFAAQPTWIATG---LSSAPCDRARQAYTFGLRTMVCLPLATGVLELGSTDVIFQT 237
Query: 206 WGLVHQVKSLF 216
+ ++++LF
Sbjct: 238 GDSIPRIRALF 248
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 374 (136.7 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 84/165 (50%), Positives = 116/165 (70%)
Query: 339 ETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKID--DLE 396
+ PLNHVEAER RREKLNHRFYALRAVVPNVS+MDK SLL DAV YI ELK K + +LE
Sbjct: 339 DKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELE 398
Query: 397 SQLLQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSD-AMIRVQSE 455
++ + ++K EI+ + SV + ++ +++E KIM SD AM+RV+S
Sbjct: 399 KHAIEIQFNELK-EIAGQRNAIPSVCKYEEKASEM-----MKIEVKIMESDDAMVRVESR 452
Query: 456 NVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDGLR 500
+HP A+LM++L DL+L+++HAS+S +NDLM+Q V++ GLR
Sbjct: 453 KDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKM--GLR 495
Score = 300 (110.7 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 70/195 (35%), Positives = 108/195 (55%)
Query: 28 QRLQFIVQSQPEWWAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDXXXXXXXXXXXXXXX 87
+RL ++ E W+YAIFW+ +D +G+ L WGDG Y G +
Sbjct: 36 KRLHAVLNGTHEPWSYAIFWKPSYDDFSGEAVLKWGDGVYTGGNEEKTRGRLRRKKTI-- 93
Query: 88 XXLDNNMERKRAISSIRGIQQSFMGH-----EMDLSMMDGGDVTDTEWFYVMSLTRSFGA 142
L + E++R + IR + G E D+S D +VTD EWF+++S+T SFG
Sbjct: 94 --LSSPEEKERRSNVIRELNLMISGEAFPVVEDDVSDDDDVEVTDMEWFFLVSMTWSFGN 151
Query: 143 GVGIPGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLI 202
G G+ G+A +S + V +TGS + C+RAK+ G++T +CIP+ GVLEL S++ I
Sbjct: 152 GSGLAGKAFASYNPVLVTGSDLIYGSGCDRAKQGGDVGLQTILCIPSHNGVLELASTEEI 211
Query: 203 RENWGLVHQVKSLFG 217
R N L ++++ LFG
Sbjct: 212 RPNSDLFNRIRFLFG 226
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 241 (89.9 bits), Expect = 4.7e-38, Sum P(2) = 4.7e-38
Identities = 59/128 (46%), Positives = 77/128 (60%)
Query: 277 NKVKKPRKDQGCTVKSSTGQSSYTVDSEHSDSDCPLPPPVNN------ISAVEXXXXXXX 330
N K + G +V +S+ S+ T E S+S C PV+ +S V+
Sbjct: 325 NNYKTQIEFAGSSVAASSNPSTNT-QQEKSES-CTEKRPVSLLAGAGIVSVVDEKRPRKR 382
Query: 331 XXXXXXXXETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKV 390
E PLNHVEAERQRREKLN RFYALR+VVPN+S+MDKASLL DA+SYI+EL+
Sbjct: 383 GRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQE 442
Query: 391 KIDDLESQ 398
K+ +E +
Sbjct: 443 KVKIMEDE 450
Score = 236 (88.1 bits), Expect = 4.7e-38, Sum P(2) = 4.7e-38
Identities = 65/179 (36%), Positives = 88/179 (49%)
Query: 41 WAYAIFWQ-TISNDDNGQLFLAWGDGHYQGTKDXXXXXXXXXXXXXXXXXLDNNME--RK 97
W YAIFWQ T+S +GQ L WGDG + + + + RK
Sbjct: 66 WNYAIFWQQTMSR--SGQQVLGWGDGCCREPNEEEESKVVRSYNFNNMGAEEETWQDMRK 123
Query: 98 RAISSIRGIQQSFMGHEMDLSMMDGGDVTDTEWFYVMSLTRSFGAGVGIPGRAQSSGSLV 157
R + + + F G + D + VT TE F++ S+ F G G PGR SSG V
Sbjct: 124 RVLQKLHRL---FGGSDEDNYALSLEKVTATEIFFLASMYFFFNHGEGGPGRCYSSGKHV 180
Query: 158 WLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLIRENWGLVHQVKSLF 216
WL+ + + C R+ A+S GI T V +PT GVLELGS + EN GLV V++LF
Sbjct: 181 WLSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGVLELGSVWSLPENIGLVKSVQALF 239
Score = 96 (38.9 bits), Expect = 8.9e-23, Sum P(2) = 8.9e-23
Identities = 28/119 (23%), Positives = 61/119 (51%)
Query: 380 DAVSYIRELKVKIDDLESQLLQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEV 439
D S + + I +L+ ++ E ++V + S + S T +V+++ P EV
Sbjct: 425 DKASLLGDAISYIKELQEKVKIMEDERVGTDKSLSESNTITVEES-P-----------EV 472
Query: 440 ETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDG 498
+ + M + ++RV S +HPA++++ ++R+ ++ L A +S D M V++ +G
Sbjct: 473 DIQAMNEEVVVRVISPLDSHPASRIIQAMRNSNVSLMEAKLSLAEDTMFHTFVIKSNNG 531
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 239 (89.2 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 63/180 (35%), Positives = 87/180 (48%)
Query: 41 WAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDXXXXXXXXXXXXXXXXXLDNNMERKRAI 100
W YAIFWQ IS G L L WGDG+ + K+ M RKR +
Sbjct: 66 WNYAIFWQ-ISRSKAGDLVLCWGDGYCREPKEGEKSEIVRILSMGREEETHQTM-RKRVL 123
Query: 101 SSIRGIQQSFMGHEMDLSMMDGGDVTDTEWFYVMSLTRSFGAGVGIPGRAQSSGSLVWLT 160
+ + F G E + + VTDTE F + S+ SF G G PG+ +S VWL+
Sbjct: 124 QKLHDL---FGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGEGGPGKCFASAKPVWLS 180
Query: 161 GSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLIRENWGLVHQVKSLFGSDL 220
C R+ A+S GI+T V +PT GV+ELGS+ + E+ + ++SLF S L
Sbjct: 181 DVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLPESEDSILSIRSLFTSSL 240
Score = 222 (83.2 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 51/84 (60%), Positives = 62/84 (73%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIREL--KVKIDDLESQL 399
LNHVEAERQRREKLN RFYALR+VVPN+S+MDKASLL DAVSYI EL K+K+ + E +
Sbjct: 432 LNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERER 491
Query: 400 LQRESKK-VKLEISDNHSTTTSVD 422
L S + L+ SD + T+ D
Sbjct: 492 LGYSSNPPISLD-SDINVQTSGED 514
Score = 68 (29.0 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 28/150 (18%), Positives = 63/150 (42%)
Query: 349 RQR-REKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRESKKV 407
R+R R N R AL V R +K L+ +R + I ++ L ++
Sbjct: 418 RKRGRRPANGRAEALNHVEAERQRREK---LNQRFYALRSVVPNISKMDKASLLGDAVSY 474
Query: 408 KLEISDNHSTTTSVDQARPSSAGSGG---GFNLEVETKIMGSDAMIRVQSENVNHPAAKL 464
I++ H+ ++ R S + ++ + G D +R+ +HPA+++
Sbjct: 475 ---INELHAKLKVMEAERERLGYSSNPPISLDSDINVQTSGEDVTVRINCPLESHPASRI 531
Query: 465 MSSLRDLDLQLHHASMSCVNDLMLQDIVVR 494
+ + +++ ++++ D +L VV+
Sbjct: 532 FHAFEESKVEVINSNLEVSQDTVLHTFVVK 561
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 231 (86.4 bits), Expect = 4.5e-33, Sum P(2) = 4.5e-33
Identities = 54/128 (42%), Positives = 80/128 (62%)
Query: 339 ETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIREL--KVKIDDLE 396
E LNHVEAERQRREKLN RFYALRAVVPN+S+MDKASLL+DA++YI ++ K+++ + E
Sbjct: 316 EEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETE 375
Query: 397 SQLLQR-ESKKV---KLEISDNHSTTTSVDQARPSSAGSGGGFNLEV-ETKIMGSDAMIR 451
Q+++R ES ++ +++ H V + P + E ++M D+ +
Sbjct: 376 KQIMKRRESNQITPAEVDYQQRHDDAV-VRLSCPLETHPVSKVIQTLRENEVMPHDSNVA 434
Query: 452 VQSENVNH 459
+ E V H
Sbjct: 435 ITEEGVVH 442
Score = 196 (74.1 bits), Expect = 4.5e-33, Sum P(2) = 4.5e-33
Identities = 60/198 (30%), Positives = 92/198 (46%)
Query: 27 QQRLQFIVQSQPEWWAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDXXXXXXXXXXXXXX 86
QQ L+ +V+ W YA+FW + + + L WGDGH + K
Sbjct: 51 QQGLRHVVEGSD--WDYALFWLASNVNSSDGCVLIWGDGHCRVKKGASGEDYSQQD---- 104
Query: 87 XXXLDNNMERKRAISSIRGIQQSFMGHEMDLSMMDGGDVTDTEWFYVMSLTRSFGAGVGI 146
E KR + +R + SF+G + D ++ G +TD + FY+ SL SF
Sbjct: 105 --------EIKRRV--LRKLHLSFVGSDEDHRLVKSGALTDLDMFYLASLYFSFRCDTNK 154
Query: 147 PGRAQS--SGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLIRE 204
G A + SG +W Y R+ A+S G +T + +P + GV+ELGS I E
Sbjct: 155 YGPAGTYVSGKPLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVNSGVVELGSLRHIPE 214
Query: 205 NWGLVHQVKSLFG-SDLI 221
+ ++ VKS+FG SD +
Sbjct: 215 DKSVIEMVKSVFGGSDFV 232
Score = 69 (29.3 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 14/65 (21%), Positives = 34/65 (52%)
Query: 438 EVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPD 497
EV+ + DA++R+ HP +K++ +LR+ ++ H ++++ + ++ +R
Sbjct: 391 EVDYQQRHDDAVVRLSCPLETHPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTLRPQG 450
Query: 498 GLRTE 502
G E
Sbjct: 451 GCTAE 455
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 229 (85.7 bits), Expect = 7.7e-30, Sum P(3) = 7.7e-30
Identities = 58/190 (30%), Positives = 92/190 (48%)
Query: 27 QQRLQFIVQSQPEWWAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDXXXXXXXXXXXXXX 86
Q L+ VQS W Y++FWQ Q L WG+G+Y G
Sbjct: 21 QGLLKTAVQSVD--WTYSVFWQFCPQ----QRVLVWGNGYYNGAIKTRKTTQPAEVTAEE 74
Query: 87 XXXLDNNMERKRAISSIRGIQQSFMGHEMDLSMMDGGDVTDTEWFYVMSLTRSFGAGVGI 146
L+ + + + ++ + + + + D+T+TEWFY+M ++ SF G+
Sbjct: 75 AA-LERSQQLRELYETLLAGEST--SEARACTALSPEDLTETEWFYLMCVSFSFPPPSGM 131
Query: 147 PGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLIRENW 206
PG+A + VWL+G++E+ RA A+S I+T VCIP GV+ELG++ +RE+
Sbjct: 132 PGKAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDV 191
Query: 207 GLVHQVKSLF 216
V KS F
Sbjct: 192 EFVELTKSFF 201
Score = 165 (63.1 bits), Expect = 7.7e-30, Sum P(3) = 7.7e-30
Identities = 29/67 (43%), Positives = 50/67 (74%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQ 401
L+HV AER+RREKLN +F LR++VP V++MDK S+L D ++Y+ L+ ++ +LE+ +
Sbjct: 362 LSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHE 421
Query: 402 RESKKVK 408
++ K+ +
Sbjct: 422 QQHKRTR 428
Score = 41 (19.5 bits), Expect = 7.7e-30, Sum P(3) = 7.7e-30
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 438 EVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVND 485
EVE I+ +D ++ ++ E + ++ L +L ++ S VND
Sbjct: 437 EVEVSIIENDVLLEMRCEYRDGLLLDILQVLHELGIETTAVHTS-VND 483
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 229 (85.7 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 54/181 (29%), Positives = 88/181 (48%)
Query: 41 WAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDXXXXXXXXXXXXXXXXXLDNNMERKRAI 100
W+Y IFW ++S G L WGDG+Y G L+ + + +
Sbjct: 26 WSYGIFW-SVSASQPG--VLEWGDGYYNGDIKTRKTIQAAEVKIDQLG-LERSEQLRELY 81
Query: 101 SSIRGIQQSFMGHEM-----DLSMMDGGDVTDTEWFYVMSLTRSFGAGVGIPGRAQSSGS 155
S+ + S G + + D+TDTEW+Y++ ++ F G GIPG A S+G
Sbjct: 82 ESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMSFVFNIGEGIPGGALSNGE 141
Query: 156 LVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLIRENWGLVHQVKSL 215
+WL + R+ A+S ++T VC P GVLE+G+++ I+E+ ++ VK+L
Sbjct: 142 PIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLGGVLEIGTTEHIKEDMNVIQSVKTL 201
Query: 216 F 216
F
Sbjct: 202 F 202
Score = 167 (63.8 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 41/127 (32%), Positives = 71/127 (55%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQR 402
NH +E++RREKLN RF LR+++P++S++DK S+L D + Y+++L+ ++ +LES R
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESC---R 461
Query: 403 ESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVNHPAA 462
ES +D + T + + +P N + +K GSD + + E + A
Sbjct: 462 ES-------ADTETRITMMKRKKPDDEEERASANC-MNSKRKGSDVNVG-EDEPADIGYA 512
Query: 463 KLMSSLR 469
L +LR
Sbjct: 513 GLTDNLR 519
Score = 51 (23.0 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 26/127 (20%), Positives = 52/127 (40%)
Query: 362 LRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRESKKVKLEISDNHSTTTSV 421
L+ + V ++ +D + I +K K D E + K + SD +V
Sbjct: 447 LQDLQKRVQELESCRESADTETRITMMKRKKPDDEEERASANCMNSKRKGSD-----VNV 501
Query: 422 DQARPSSAGSGG-GFNLEVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASM 480
+ P+ G G NL + + +G++ +I ++ ++M + DL+L H
Sbjct: 502 GEDEPADIGYAGLTDNLRISS--LGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQS 559
Query: 481 SCVNDLM 487
S + L+
Sbjct: 560 STGDGLL 566
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 212 (79.7 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 54/183 (29%), Positives = 88/183 (48%)
Query: 41 WAYAIFWQTISNDDNGQLFLAWGDGHYQG---TKDXXXXXXXXXXXXXXXXX--LDNNME 95
W+Y IFW ++S +G L WGDG+Y G T+ L E
Sbjct: 27 WSYGIFW-SVSASQSG--VLEWGDGYYNGDIKTRKTIQASEIKADQLGLRRSEQLSELYE 83
Query: 96 RKR-AISSIRGIQQ-SFMGHEMDLSMMDGGDVTDTEWFYVMSLTRSFGAGVGIPGRAQSS 153
A SS G+ S + + + D+ DTEW+Y++ ++ F G G+PGR ++
Sbjct: 84 SLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYLVCMSFVFNIGEGMPGRTFAN 143
Query: 154 GSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLIRENWGLVHQVK 213
G +WL +H R+ A+S ++T VC P GV+E+G+++ I E+ ++ VK
Sbjct: 144 GEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPFLGGVVEIGTTEHITEDMNVIQCVK 203
Query: 214 SLF 216
+ F
Sbjct: 204 TSF 206
Score = 158 (60.7 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 42/129 (32%), Positives = 68/129 (52%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQR 402
NH E++RREKLN RF LR ++P+++++DK S+L D + Y++EL+ ++ +LES R
Sbjct: 441 NHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESC---R 497
Query: 403 ESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNL-EVETKIMGSDAMIRVQSENVNHPA 461
ES ++ T T + + +P AG N ET G+ + V + PA
Sbjct: 498 ESTD-----TETRGTMT-MKRKKPCDAGERTSANCANNET---GNGKKVSVNNVGEAEPA 548
Query: 462 AKLMSSLRD 470
+ L D
Sbjct: 549 DTGFTGLTD 557
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 220 (82.5 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
Identities = 57/178 (32%), Positives = 83/178 (46%)
Query: 41 WAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDXXXXXXXXXXXXXXXXXLDNNMERKRAI 100
W+Y IFW T S G L W DG Y G + R +
Sbjct: 32 WSYTIFWST-STSLPG--VLTWNDGFYNGEVKTRKISNLEDLTADQLV-----LRRSEQL 83
Query: 101 SSIRGIQQSFMGHEMD------LSMMDGGDVTDTEWFYVMSLTRSFGAGVGIPGRAQSSG 154
S + S + E D ++ + D+ DTEW+YV+ +T +F G G+PGR+ +S
Sbjct: 84 SEL---YYSLLSGECDHRARKPVAALSPEDIADTEWYYVVCMTYAFRPGQGLPGRSYASN 140
Query: 155 SLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLIRENWGLVHQV 212
VWL + RA A+S I+T VCIP GVLELG++D + E+ LV+++
Sbjct: 141 RSVWLCNAQSADSKTFLRALLAKSASIQTIVCIPFMSGVLELGTTDPVSEDPNLVNRI 198
Score = 142 (55.0 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
Identities = 24/55 (43%), Positives = 45/55 (81%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLES 397
+HV +ER+RREKLN F L++++P+V ++DKAS+L++ ++Y++ L+ ++ +LES
Sbjct: 378 SHVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKELES 432
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 69/164 (42%), Positives = 96/164 (58%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQ 401
++HVEAERQRREKLN RF LRA VP VSRMDKASLL+DA +YI EL+ ++ LES
Sbjct: 110 VSHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELRARVARLESDA-- 167
Query: 402 RESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAM-IRVQSENVNHP 460
R++ + E S + G+ G + VE + MG DA +RV + H
Sbjct: 168 RQAAAARFEPSSCGGGGNASYHGGGGGGGAAPGLDEAVEVRKMGRDAAAVRVTTTGARHA 227
Query: 461 AAKLMSSLRDLDLQLHHASMSCVNDLM-LQDIVVRVPDGLRTED 503
A+LM +LR L+L + HA + V+ +Q+++V VP L+ D
Sbjct: 228 PARLMGALRSLELPVQHACVMRVHGATTVQEVLVDVPAALQDGD 271
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 193 (73.0 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 49/160 (30%), Positives = 74/160 (46%)
Query: 41 WAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDXXXXXXXXXXXXXXXXXLDNNMERKRAI 100
W+YAIFW +IS G L W DG Y G + R+
Sbjct: 32 WSYAIFW-SISTSCPG--VLTWNDGFYNGVVKTRKISNSADLTAGQLVVQRSEQLRELYY 88
Query: 101 SSIRGIQQSFMGHEMDLSMMDGGDVTDTEWFYVMSLTRSFGAGVGIPGRAQSSGSLVWLT 160
S + G + ++ + D+ DTEW+YV+ +T SF G G+PG++ +S + VWL
Sbjct: 89 SLLSG--ECDHRARRPIAALSPEDLADTEWYYVVCMTYSFQPGQGLPGKSYASNASVWLR 146
Query: 161 GSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSD 200
+ R+ A+ T +CIP + GVLELG++D
Sbjct: 147 NAQSADSKTFLRSLLAK-----TIICIPFTSGVLELGTTD 181
Score = 152 (58.6 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQR 402
NHV +ER+RREKLN F L+++VP++ ++DKAS+L + ++Y++ L+ ++ +LES
Sbjct: 392 NHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVLEKRVKELESSSEPS 451
Query: 403 ESKKVKLEISDNHSTTTS--VDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVNHP 460
+ + T V + S G G + V + ++ VQ
Sbjct: 452 HQRATETGQQRRCEITGKELVSEIGVSGGGDAGREHHHVNVTVTDKVVLLEVQCRWKELV 511
Query: 461 AAKLMSSLRDLDLQLHHASMSCVNDLM 487
++ +++ L L + S + L+
Sbjct: 512 MTRVFDAIKSLCLDVLSVQASAPDGLL 538
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 262 (97.3 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 71/166 (42%), Positives = 101/166 (60%)
Query: 341 PLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLL 400
P+ HVEAERQRREKLN RF LRA VP VSRMDKASLL+DAV YI EL+ +++ LE+
Sbjct: 92 PIGHVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERLEA--- 148
Query: 401 QRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMI-RVQSENV-- 457
E+++ L S + A AG+ G +L V +++G DA I R+ +
Sbjct: 149 --EARRAPLA----PSAAAAAAWAAGLGAGAIGRDDLVV--RMIGRDAAILRLTTAAAAA 200
Query: 458 NHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVR-VPDGLRTE 502
H A++M ++R L+L + HAS++ V +QD++V VP L+ E
Sbjct: 201 RHAPARMMCAVRALNLAVQHASVARVGGATVQDVMVDDVPAALQDE 246
>TAIR|locus:2127023 [details] [associations]
symbol:ATMYC1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048629 "trichome
patterning" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=RCA] [GO:0009913 "epidermal cell differentiation"
evidence=RCA] [GO:0009957 "epidermal cell fate specification"
evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002687
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 GO:GO:0048629 IPI:IPI00938615 RefSeq:NP_001154194.1
UniGene:At.28313 ProteinModelPortal:F4JHC4 SMR:F4JHC4
EnsemblPlants:AT4G00480.2 GeneID:827965 KEGG:ath:AT4G00480
OMA:FWSLSTR Uniprot:F4JHC4
Length = 580
Score = 194 (73.4 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 59/199 (29%), Positives = 91/199 (45%)
Query: 29 RLQFIVQSQPEWWAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDXXXXXXXXXXXXXXXX 88
R Q + + W+YAIFW + S G L WG+G Y G
Sbjct: 24 RKQLALAVRSVQWSYAIFWSS-SLTQPG--VLEWGEGCYNGDMKKRKKSYESHYKYG--- 77
Query: 89 XLDNNME-RKRAISSIRGIQQSFMGHEMD-----------LSMM-DGGDVTDTEWFYVMS 135
L + E RK +S + G + + D SMM D++D EW+Y++S
Sbjct: 78 -LQKSKELRKLYLSMLEGDSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLSDEEWYYLVS 136
Query: 136 LTRSFGAGVGIPGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLE 195
++ F +PGRA ++G +WL + + R+ A+S I+T VC P GV+E
Sbjct: 137 MSYVFSPSQCLPGRASATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFPYLGGVIE 196
Query: 196 LGSSDLIRENWGLVHQVKS 214
LG ++LI E+ L+ +KS
Sbjct: 197 LGVTELISEDHNLLRNIKS 215
Score = 122 (48.0 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 36/160 (22%), Positives = 78/160 (48%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLES---- 397
LN + +R+E N +F LR +VP V+ +DK S+L++ + Y++EL+ ++++LES
Sbjct: 338 LNQDDPSDRRKE--NEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGS 395
Query: 398 -QLLQRESKKVKL--------EISDNHSTTTSVDQ-ARPSSAGSGGGFNLEVETKIMGSD 447
++R+ K + E S N+ +T +D + + + + K+ ++
Sbjct: 396 VNFVERQRKTTENLNDSVLIEETSGNYDDSTKIDDNSGETEQVTVFRDKTHLRVKLKETE 455
Query: 448 AMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLM 487
+I V+ ++ A +M +L +L + +N +
Sbjct: 456 VVIEVRCSYRDYIVADIMETLSNLHMDAFSVRSHTLNKFL 495
Score = 40 (19.1 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 9/45 (20%), Positives = 25/45 (55%)
Query: 369 VSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRESKKVKLEISD 413
V + L+S+ + +R +K + ++ + + KK++++IS+
Sbjct: 194 VIELGVTELISEDHNLLRNIKSCLMEISAHQDNDDEKKMEIKISE 238
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 213 (80.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 52/147 (35%), Positives = 87/147 (59%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQR 402
+H+ AER+RREKL RF AL A++P + +MDKAS+L DA+ +I+ L+ + + E Q ++
Sbjct: 126 DHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEK 185
Query: 403 --ES----KKVKLEISDNH--STTTSVDQARPSSAGSGGGFNL-EVETKIMGSDAMIRVQ 453
ES KK L + +NH S+++S D R SS+ NL E+E ++ G D +I++
Sbjct: 186 TMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSS-----NLPEIEVRVSGKDVLIKIL 240
Query: 454 SENVNHPAAKLMSSLRDLDLQLHHASM 480
E K+M + L L + ++++
Sbjct: 241 CEKQKGNVIKIMGEIEKLGLSITNSNV 267
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 205 (77.2 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 52/145 (35%), Positives = 82/145 (56%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLES-QLLQR 402
H+ AER+RREK+N RF L V+P + +MDKA++LSDAV Y++E++ K+ +LE Q
Sbjct: 193 HIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELEQHQNGGV 252
Query: 403 ES----KK--VKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSEN 456
ES KK + SD S A SS+G+ E+E KI + M+R+ EN
Sbjct: 253 ESAILLKKPCIATSSSDGGCPAASSAVAGSSSSGTARSSLPEIEAKISHGNVMVRIHGEN 312
Query: 457 VNHPA-AKLMSSLRDLDLQLHHASM 480
+ +L++++ L L + H ++
Sbjct: 313 NGKGSLVRLLAAVEGLHLGITHTNV 337
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 200 (75.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 53/146 (36%), Positives = 85/146 (58%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQR 402
+H+ AER+RREKL RF AL A+VP + +MDKAS+L DA+ +I+ L+ ++ +LE Q +R
Sbjct: 152 DHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKER 211
Query: 403 --ES----KKVKLEISDNHSTTTSVDQARPSSAGSG-GGFNL-EVETKIMGSDAMIRVQS 454
ES KK KL + DN+ Q+ SS G +L E+E + D +I++
Sbjct: 212 RLESMVLVKKSKLILDDNN-------QSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILC 264
Query: 455 ENVNHPAAKLMSSLRDLDLQLHHASM 480
E AK+M+ + L + + ++S+
Sbjct: 265 EKQKGHLAKIMAEIEKLHILITNSSV 290
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 200 (75.5 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 46/140 (32%), Positives = 77/140 (55%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQR 402
+H+ AER+RREK+N RF L V+P + +MDKA++L DAV Y++EL+ K+ LE +
Sbjct: 167 DHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEE--DG 224
Query: 403 ESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNL--EVETKIMGSDAMIRVQSENVNHP 460
+ + + + + R S+AG G G E+E ++ ++RVQ N
Sbjct: 225 GGRPAAMVVRKSSCS------GRQSAAGDGDGEGRVPEIEVRVWERSVLVRVQCGNSRGL 278
Query: 461 AAKLMSSLRDLDLQLHHASM 480
+L+S + +L L + H S+
Sbjct: 279 LVRLLSEVEELRLGITHTSV 298
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 194 (73.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 53/158 (33%), Positives = 81/158 (51%)
Query: 341 PLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLL 400
P ++ AER+RR+KLN R Y LR+VVP +S+MD+AS+L DA+ Y++EL +I+DL ++L
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
Query: 401 QRESKKVKLEISDNHSTTTSV--------DQARPSSAGSGGGFNLEVETKIMGSDAMIRV 452
+ S H T + ++ PSS S G VE ++ A + +
Sbjct: 365 STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRA-VNI 423
Query: 453 QSENVNHPAAKL--MSSLRDLDLQLHHASMSCVNDLML 488
P L M +L +L L + A +SC N L
Sbjct: 424 HMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFAL 461
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 186 (70.5 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 49/143 (34%), Positives = 78/143 (54%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQ 401
L HV AER+RREK+N RF L AV+P + +MDKA++LSDA SYIREL+ K+ LE Q
Sbjct: 129 LEHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEEQAAA 188
Query: 402 RESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNL--EVETKIMGSD--AMIRVQSENV 457
R T A PS A + + E+E + ++ M+R+ EN
Sbjct: 189 R---------------VTEAAMATPSPARAMNHLPVPPEIEVRCSPTNNVVMVRIHCENG 233
Query: 458 NHPAAKLMSSLRDLDLQLHHASM 480
++++ + ++ L++ +A++
Sbjct: 234 EGVIVRILAEVEEIHLRIINANV 256
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 156 (60.0 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 26/55 (47%), Positives = 46/55 (83%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLES 397
NHV +ER+RREKL F L++VVP++ ++DKAS+L++ ++Y++EL+ ++++LES
Sbjct: 244 NHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELES 298
Score = 76 (31.8 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 176 AQSHGIETFVCIPTSC-GVLELGSSDLIRENWGLVHQV 212
+QS I+T VC+P GVLELG++D + E+ LV ++
Sbjct: 13 SQSASIKTIVCVPFIMHGVLELGTTDPVSEDPALVDRI 50
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 188 (71.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 53/162 (32%), Positives = 85/162 (52%)
Query: 341 PLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLL 400
P ++ AER+RR+KLN R Y LR+VVP +S+MD+AS+L DA+ Y++EL KI+DL+++L
Sbjct: 334 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQNELE 393
Query: 401 QRES-KKVKLEISDNHSTTTSV--------DQARPSSAGSGGGFNLEVETKIMGSDAMIR 451
+ + + H T ++ ++ PS+ S G VE ++ A +
Sbjct: 394 SSPATSSLPPTPTSFHPLTPTLPTLPSRIKEEICPSALPSPTGQQPRVEVRLREGRA-VN 452
Query: 452 VQSENVNHPAAKL--MSSLRDLDLQLHHASMSCVNDLMLQDI 491
+ P L M ++ L L + A +SC N L DI
Sbjct: 453 IHMFCARRPGLLLSAMRAVEGLGLDVQQAVISCFNGFTL-DI 493
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 43/159 (27%), Positives = 81/159 (50%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
H+ AER+RREKL+ RF AL +VP + +MDKAS+L DA+ Y+++L+ ++ LE + +R
Sbjct: 182 HILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRP 241
Query: 404 SKKV----KLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVNH 459
+ K ++S + +S D+ + G E+E ++ ++++ EN
Sbjct: 242 VEAAVLVKKSQLSADDDDGSSCDENFDGGEATAG--LPEIEARVSERTVLVKIHCENRKG 299
Query: 460 PAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDG 498
+S + + L + + ++ L DI + G
Sbjct: 300 ALITALSEVETIGLTIMNTNVLPFTSSSL-DITIMATAG 337
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 152 (58.6 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 27/56 (48%), Positives = 45/56 (80%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
++EAER+RR+KLN Y LR++VPN+++MD+AS+L DA+ YI L+ ++ +L+ +L
Sbjct: 286 NLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQDEL 341
Score = 69 (29.3 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 25/114 (21%), Positives = 54/114 (47%)
Query: 390 VKIDDLESQLLQRESKKVKLEISDNHSTTTSVDQARPSS---AGSGGGFNLE--VETK-I 443
V +D+ ++ ++ L +S + S ++ D A G GGG +E +E + +
Sbjct: 364 VGLDNDDASPPNSHQQQPPLAVSGSSSRRSNKDPAMTDDKVGGGGGGGHRMEPQLEVRQV 423
Query: 444 MGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPD 497
G++ ++V E+ +LM ++ L L++ + +++ L+L V V D
Sbjct: 424 QGNELFVQVLWEHKPGGFVRLMDAMNALGLEVINVNVTTYKTLVLNVFRVMVRD 477
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 165 (63.1 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 31/67 (46%), Positives = 51/67 (76%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
+V +ER RR+KLN R +ALR+VVPN+S++DKAS++ D++ Y++EL + LE+++ + E
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
Query: 404 SKKVKLE 410
S+ LE
Sbjct: 115 SRSTLLE 121
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 162 (62.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 44/146 (30%), Positives = 77/146 (52%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQ----- 398
HV AER+RR+KLN R AL A++P + + DKA++L DA+ ++++L+ ++ LE +
Sbjct: 133 HVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVVTK 192
Query: 399 ------LLQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLE---VETKIMGSDAM 449
+L + S+ + S ++S+T S SS+ F +E ++ D +
Sbjct: 193 KMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSDRDLL 252
Query: 450 IRVQSENVNHPAAKLMSSLRDLDLQL 475
IRV E K++SSL L++
Sbjct: 253 IRVHCEKNKGCMIKILSSLEKFRLEV 278
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 163 (62.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 29/65 (44%), Positives = 52/65 (80%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLES-QLLQ 401
NHV +ER+RREKLN F L+++VP++ ++DKAS+LS+ ++Y++EL+ ++ +LES + +
Sbjct: 188 NHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGKKVS 247
Query: 402 RESKK 406
R +K+
Sbjct: 248 RPAKR 252
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 163 (62.4 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 341 PLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLL 400
P ++ AER+RR++LN R LR+VVP +S+MD+ S+L D + Y++EL +I +L+ +
Sbjct: 194 PSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVEAA 253
Query: 401 QRESKKVKLEISDNHSTTTSVDQARPSSAGSG-------GGFNLEVETKIMGSDAMIRVQ 453
+S E N S P S+ SG EVE + GS I +
Sbjct: 254 TGDSSSSSTE---NLSMLKLNTLKPPPSSSSGEETPLIRNSTRFEVERRENGS-TRIEMA 309
Query: 454 SENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQ 489
+ +++L L +++ +SC +D +Q
Sbjct: 310 CAAIPELLPSTLAALEALGVEIEQCVISCFDDFAMQ 345
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 164 (62.8 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 48/164 (29%), Positives = 86/164 (52%)
Query: 340 TPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
TP ++ AER+RR++LN R LR++VP +S+MD+ S+L D + Y++EL +I LE ++
Sbjct: 179 TPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEI 238
Query: 400 -LQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVN 458
+ E + + D+ S + R S+ +VE + G+ R++
Sbjct: 239 GVTPEELDLLNTMKDSSSGNNNEMLVRNST-------KFDVENRGSGNT---RIEICCPA 288
Query: 459 HPAAKL--MSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDGLR 500
+P L +S+L L L++ +SC +D +Q ++ DG R
Sbjct: 289 NPGVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASCLQ-EDGKR 331
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 123 (48.4 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 37/126 (29%), Positives = 66/126 (52%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPN--VSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
+ H+ ER RR+++N LR+++P V R D+AS++ A+ ++REL+ + LESQ
Sbjct: 197 MTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK 256
Query: 400 LQR---ESKKVKLEISDNHST--TTSVDQARP-------SSAGSGGGFNLEV-ETKIMGS 446
+R E+ + + + S+ TT +QA+P + GGG E E K +
Sbjct: 257 RRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETAENKSCLA 316
Query: 447 DAMIRV 452
D +++
Sbjct: 317 DVEVKL 322
Score = 84 (34.6 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 438 EVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPD 497
+VE K++G DAMI++ S K +++L DL L + H +++ + +L V++
Sbjct: 317 DVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFNVKITS 376
Query: 498 GLR 500
R
Sbjct: 377 ETR 379
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 158 (60.7 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 46/161 (28%), Positives = 85/161 (52%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
++ +ER+RRE++N Y LRAVVP +++++K + SDAV YI EL V+ LE +L
Sbjct: 265 NLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKGIN 324
Query: 404 SKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKI--MGS-DAMIRVQSENVNHP 460
+ K ++ S + R SS + EV+ ++ G D +IRV E+
Sbjct: 325 EMECKEIAAEEQSAIADPEAERVSSKSNKRVKKNEVKIEVHETGERDFLIRVVQEHKQDG 384
Query: 461 AAKLMSSLRDLDLQLHHASMSCVNDLMLQDIV-VRV-PDGL 499
+L+ ++ +L++ + + + DL + ++ V+ DG+
Sbjct: 385 FKRLIEAVDLCELEIIDVNFTRL-DLTVMTVLNVKANKDGI 424
Score = 45 (20.9 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 183 TFVCIPTSCGVLELGSSDLIRENWGLVHQVKS 214
T V +P S G++EL + D+ + +VH + S
Sbjct: 129 TRVLVPVSDGLVELFAFDMRPFDESMVHLIMS 160
Score = 37 (18.1 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 165 LQFYNCERAKEAQSHGIETFV 185
LQF RA+E+ S G+ V
Sbjct: 174 LQFRIIPRAEESMSSGVNLSV 194
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 51/164 (31%), Positives = 87/164 (53%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDL-------- 395
HV AER+RREKL+ +F AL A++P + + DK ++L DA+S +++L+ ++ L
Sbjct: 120 HVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATR 179
Query: 396 --ESQLLQRESKKVKLEISDNHSTTTSV----DQARPSSAGSGGGFNLEVETKIMGSDAM 449
ES +L ++SK V + N S + SV DQA P E+E KI +D +
Sbjct: 180 QMESMILVKKSK-VFFDEEPNLSCSPSVHIEFDQALP-----------EIEAKISQNDIL 227
Query: 450 IRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVV 493
IR+ E +++++ + L++ ++ + D L DI V
Sbjct: 228 IRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTL-DITV 270
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 155 (59.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 50/179 (27%), Positives = 92/179 (51%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPN--VSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
+ H+ ER RR+++N LR+++P+ R D+AS++ A++Y++EL+ + +E +
Sbjct: 115 MTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKR 174
Query: 400 LQ-RESKKVKLEISD------------NHSTTTSVDQARPSSAGSGGGFNLEVETKIMGS 446
+ + K K S +ST +S D P S+ S E+E + S
Sbjct: 175 TRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDV--PESSSSPA----EIEVTVAES 228
Query: 447 DAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDG--LRTED 503
A I++ ++ KL++SL+ L L L H +++ +++ +L I VRV +G L T D
Sbjct: 229 HANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVD 287
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 45/170 (26%), Positives = 87/170 (51%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPN--VSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
+ H+ ER RR+++N LR+++P R D+AS++ A++Y++EL+ + +E +
Sbjct: 125 MTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPV 184
Query: 400 LQR---------ESKKVKLEISDNHSTTTSVDQA--RPSSAGSGGGFNLEVETKIMGSDA 448
++K S S + Q RP+SA + G E+E ++ S A
Sbjct: 185 KTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEGM-AEIEVTMVESHA 243
Query: 449 MIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDG 498
+++ ++ KL+SS++ L L L H +++ +D +L I V+V +G
Sbjct: 244 SLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEEG 293
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 115 (45.5 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 22/70 (31%), Positives = 42/70 (60%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPN--VSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
++H+ ER RR ++N LR++ P + R D+AS++ A+ +I+EL+ + LE+Q
Sbjct: 1 MSHIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQK 60
Query: 400 LQRESKKVKL 409
+R+ + L
Sbjct: 61 KRRQQPQAHL 70
Score = 75 (31.5 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 14/58 (24%), Positives = 35/58 (60%)
Query: 438 EVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRV 495
+VE +I G++ ++R S P ++++ L L L++ H +++ ++D +L V+++
Sbjct: 139 DVEARISGANVLLRTLSRRA--PPVRIIALLESLHLEVLHLNITTMDDTVLYSFVLKI 194
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 153 (58.9 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 41/171 (23%), Positives = 86/171 (50%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPN--VSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
+ H+ ER RR ++N +LR+++P + R D+AS++ A+ +I+EL+ + LE++
Sbjct: 115 MTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEAEK 174
Query: 400 LQRESKKVKLEISDNHS-----TTTSVDQARPSS-----AGSGGGFNLEVETKIMGSDAM 449
+ + + S + S T +S+ +S A GGG EVE ++ +
Sbjct: 175 RKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTEVEATVIQNHVS 234
Query: 450 IRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDGLR 500
++V+ + K + S+ +L L + H ++S D ++ +++ DG +
Sbjct: 235 LKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMEDGCK 285
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 101 (40.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 19/59 (32%), Positives = 37/59 (62%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVP--NVSRMDKASLLSDAVSYIRELKVKIDDLESQ 398
++H+ ER RR ++N +LR++ P + R D+AS++ + +I+EL+ + LES+
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESK 59
Score = 86 (35.3 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 439 VETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRV 495
VE KI GS+ ++RV S + K++S L L Q+ H ++S + + +L VV++
Sbjct: 117 VEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKI 173
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 150 (57.9 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 41/149 (27%), Positives = 80/149 (53%)
Query: 341 PLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLL 400
P ++ AER+RR++LN R LR++VP +++MD+ S+L DA+ Y++EL KI+ L
Sbjct: 149 PSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKL----- 203
Query: 401 QRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVNHP 460
Q + +++ S++H +T +++ ++ EV+ + + + I +
Sbjct: 204 QEDEQELG---SNSHLSTLITNESMVRNS-----LKFEVDQREVNTH--IDICCPTKPGL 253
Query: 461 AAKLMSSLRDLDLQLHHASMSCVNDLMLQ 489
+S+L L L++ +SC +D LQ
Sbjct: 254 VVSTVSTLETLGLEIEQCVISCFSDFSLQ 282
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 153 (58.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 44/149 (29%), Positives = 69/149 (46%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
HV AER+RREKL +F AL +VP + + DK SLL + Y+++L+ K+ LE +
Sbjct: 288 HVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQLEEKVKALEEGSRRTA 347
Query: 404 SKKVKLEISDNHSTTTSVDQARPSSA---GSGGGFNLEVETKIMGSDAMIRVQSENVNHP 460
E S T D SS GS + VE I G+ ++++ +
Sbjct: 348 EPTTAFE-SKCRITVDDDDGGSASSGTDDGSSSSSSPTVEASIHGNTVLLKICCKERRGL 406
Query: 461 AAKLMSSLRDLDLQLHHASM-----SCVN 484
++S L L + + S+ SC+N
Sbjct: 407 LVMILSELEKQGLSIINTSVVPFTDSCLN 435
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 154 (59.3 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 26/53 (49%), Positives = 45/53 (84%)
Query: 347 AERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
AER+RR+KLN R YALR++VP ++++D+AS+L DA++Y++EL+ + +L+ +L
Sbjct: 318 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDEL 370
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 148 (57.2 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 43/147 (29%), Positives = 73/147 (49%)
Query: 298 SYTVDSEHSDSDCPLPPPVNNISAVEXXXXXXXXXXXXXXXETPLNHVEAERQRREKLNH 357
+YT S ++DS P V N+ + ++ ER RR++LN
Sbjct: 64 AYTSQSRYADSSSP---DVVNLCSTAVASAAAAASS---------KNIAMERDRRKRLNE 111
Query: 358 RFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDL--ESQLLQRESKKVKL---EIS 412
+ +ALRAVVP +++MDKAS++ DA+++I +L+ + L E +LQ + ++
Sbjct: 112 KLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDEISVLQSAAAVAATAVEDVD 171
Query: 413 DNHSTTTSVDQARPSSAGSGGGFNLEV 439
D+ T S+ + R + GGG L V
Sbjct: 172 DSGVTMPSMKKLRSTPPLDGGGGALRV 198
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 143 (55.4 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDD 394
+H EAER+RR+++N LR +VP+ SRMDKA+LL + V ++REL+ + DD
Sbjct: 22 SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADD 73
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 147 (56.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 348 ERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRES 404
ER RR KLN + YALR+VVPN+++MDKAS++ DA+ YI+ L+ + + ++ ES
Sbjct: 98 ERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQMLREVAALES 154
>TAIR|locus:2168235 [details] [associations]
symbol:AT5G65320 "AT5G65320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB011479 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 EMBL:AY070095 EMBL:AY096704
EMBL:AF488625 IPI:IPI00548412 RefSeq:NP_201335.1 UniGene:At.28395
ProteinModelPortal:Q9FKQ6 SMR:Q9FKQ6 EnsemblPlants:AT5G65320.1
GeneID:836657 KEGG:ath:AT5G65320 TAIR:At5g65320 eggNOG:NOG237691
InParanoid:Q9FKQ6 OMA:PNDQASI PhylomeDB:Q9FKQ6
ProtClustDB:CLSN2916276 Genevestigator:Q9FKQ6 Uniprot:Q9FKQ6
Length = 296
Score = 145 (56.1 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 45/167 (26%), Positives = 86/167 (51%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVP-NVSRM-DKASLLSDAVSYIRELKVKIDDLESQL 399
+NH+ ER RR+++NH L++++P + S+ D+AS++ +SY+++L+ ++ LE+QL
Sbjct: 102 MNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSLEAQL 161
Query: 400 LQRESKKVKLEISD-----NHSTTTSVDQARPSSAGSGGGFN--LEV----ETKIMGSDA 448
+ + SD +ST T+ A SS+ S + LEV E ++ A
Sbjct: 162 KATKLNQSPNIFSDFFMFPQYSTATATATATASSSSSSHHHHKRLEVVADVEVTMVERHA 221
Query: 449 MIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRV 495
I+V ++ K+++ L L H +++ D+ L V+V
Sbjct: 222 NIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKV 268
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 46/151 (30%), Positives = 78/151 (51%)
Query: 341 PLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLL 400
P ++ AER+RR++LN R LR++VP +S+MD+ S+L DA+ Y++EL KI+ L+ +
Sbjct: 176 PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDE-- 233
Query: 401 QRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVNHP 460
++E L S+N + + +A N + +I D RV P
Sbjct: 234 EQE-----LGNSNNSHHSKLFGDLKDLNANEPLVRN-SPKFEIDRRDEDTRVDICCSPKP 287
Query: 461 AAKL--MSSLRDLDLQLHHASMSCVNDLMLQ 489
L +++L L L++ +SC +D LQ
Sbjct: 288 GLLLSTVNTLETLGLEIEQCVISCFSDFSLQ 318
>UNIPROTKB|Q5SMX2 [details] [associations]
symbol:P0498B01.25 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003417 ProteinModelPortal:Q5SMX2
EnsemblPlants:LOC_Os01g09930.1 Gramene:Q5SMX2 HOGENOM:HOG000237612
OMA:IRAREHI Uniprot:Q5SMX2
Length = 412
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 38/110 (34%), Positives = 60/110 (54%)
Query: 339 ETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQ 398
+ L H+ +ER+RREKLN F AL+AV+P S+ DKAS+L A +I+ L+ K+ +LE +
Sbjct: 180 DNQLQHMISERKRREKLNDSFVALKAVLPTGSKKDKASILIRAREHIKSLESKLSELEEK 239
Query: 399 LLQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDA 448
+ E++ + N T+ +A + +EV T GS A
Sbjct: 240 NRELEARLASRPAAKNDKGETAAAEAGDETKREDL-VEIEVTTTSGGSGA 288
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 27/76 (35%), Positives = 52/76 (68%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDL-ESQLLQ 401
+H EAER+RRE++N+ LR+++PN ++ DKASLL++ + +++ELK + + E+ L+
Sbjct: 177 SHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVISETNLVP 236
Query: 402 RESKKVKLEISDNHST 417
ES ++ + ++ T
Sbjct: 237 TESDELTVAFTEEEET 252
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 134 (52.2 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELK 389
+H EAER+RRE++N LR +VP+ SRMDKA+LL + V Y+R+L+
Sbjct: 31 SHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLR 77
Score = 37 (18.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 404 SKKVKLEISDNHSTTTS---VDQARPSSAGSG--GGFNLE-----VETKIMGSDAMIRVQ 453
++ V+ EI+ T S +D AR ++AG G G L + IM + ++ V+
Sbjct: 144 ARAVRAEIATVGGRTRSDLELDVARTAAAGGGSNGASQLPALQAALRAVIMSQEELLAVE 203
Query: 454 S 454
S
Sbjct: 204 S 204
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 106 (42.4 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVP--NVSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
++HV ER RR+++N LR+++P V R D+AS++ V YI EL+ + LE++
Sbjct: 102 MSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKK 161
Query: 400 LQRES 404
QR++
Sbjct: 162 -QRKT 165
Score = 81 (33.6 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 17/85 (20%), Positives = 43/85 (50%)
Query: 411 ISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVNHPAAKLMSSLRD 470
+S NH ++ + S + +VE K G++ +++ S + K++++L D
Sbjct: 265 VSSNHESSVINELVANSKSALA-----DVEVKFSGANVLLKTVSHKIPGQVMKIIAALED 319
Query: 471 LDLQLHHASMSCVNDLMLQDIVVRV 495
L L++ +++ V++ ML +++
Sbjct: 320 LALEILQVNINTVDETMLNSFTIKI 344
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 137 (53.3 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 26/56 (46%), Positives = 43/56 (76%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
++EAER+RR +LN +ALRAVVP +++M K + LSDA+ +I+ L+ ++ +L+ QL
Sbjct: 66 NLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHIKNLQNEVLELQRQL 121
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 104 (41.7 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 340 TPLN-HVEAERQRREKLNHRFYALRAVVP--NVSRMDKASLLSDAVSYIRELKVKIDDLE 396
TP H+ ER RR+++N LR+++P V R D+AS++ V YI+EL+ + LE
Sbjct: 134 TPKTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLE 193
Query: 397 SQ 398
++
Sbjct: 194 AK 195
Score = 83 (34.3 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 424 ARPSSAGSGGGFNL-EVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSC 482
A S GGG L +V+ + G++ +++ S+ A K++++L L++ HA +S
Sbjct: 304 AYASRQALGGGLLLPDVKVEFAGANLVLKTVSQRSPGQAVKIIAALEGRSLEILHAKIST 363
Query: 483 VNDLMLQDIVVRVPDGLRTE 502
V+D + V++ G+ E
Sbjct: 364 VDDTAVNSFTVKI--GIECE 381
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/145 (23%), Positives = 73/145 (50%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPN--VSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
+ H+ ER RR +N +LR+++P+ + R D+A+++ A+ Y+++L+ ++ L++
Sbjct: 117 MTHIAVERNRRRLMNDHLASLRSLIPSNYIPRGDQATVVGGAIDYVKQLEQQLVALQAAA 176
Query: 400 LQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVE-TKIMGSDAMIRVQSENVN 458
+R V + S V S + + GG ++VE T +G +RV
Sbjct: 177 AERSGVGVVAAAATAASDGVFVSPQYTSYSEARGGSGVDVEATAAVGGHVRVRVAGRRWT 236
Query: 459 HPAAKLMSSLRDLDLQLHHASMSCV 483
+ ++++ DL L + H +++ V
Sbjct: 237 GRLVRAVAAMEDLRLTVLHLAVTSV 261
>UNIPROTKB|Q5JNS0 [details] [associations]
symbol:P0706B05.43 "Os01g0293100 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002482 RefSeq:NP_001042795.1 UniGene:Os.54828 GeneID:4325164
KEGG:osa:4325164 HOGENOM:HOG000071096 OMA:HPQCELL
ProtClustDB:CLSN2691354 Uniprot:Q5JNS0
Length = 379
Score = 137 (53.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 33/95 (34%), Positives = 62/95 (65%)
Query: 341 PLNHVEA-ERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
P N VE E+QRR +L ++ AL ++PN ++ D+A+++SDA+ YI+EL +++L + L
Sbjct: 174 PANGVEKKEKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQELGRTVEEL-TLL 232
Query: 400 LQRESKKVKLEISDNHSTTTSV----DQARPSSAG 430
++++ ++ +++ + T+SV DQA SS G
Sbjct: 233 VEKKRRRREMQGDVVDAATSSVVAGMDQAAESSEG 267
Score = 44 (20.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 14/60 (23%), Positives = 25/60 (41%)
Query: 439 VETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDG 498
V+ +I+ D I++ + A +L DL L L H S + D + ++ G
Sbjct: 301 VDVRIVEDDVNIKLTKRRRDGCLAAASRALDDLRLDLVHLSGGKIGDCHIYMFNTKIHSG 360
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 132 (51.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
++EAER+RREKL+ R ALR+ VP V+ M KAS++ DA++YI EL+ + +L + E
Sbjct: 33 NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFHEME 92
Query: 404 SKKVKL-EISDNHSTTTSVDQARPSSAGSGGGFNLEVET-KIMGSDAMIRVQSENVNHPA 461
++ E + V+ + + G V+ KI +++ +E +
Sbjct: 93 EAPPEIDEEQTDPMIKPEVETSDLNEEMKKLGIEENVQLCKIGERKFWLKIITEKRDGIF 152
Query: 462 AKLMSSLRDLDLQLHHASMSCVNDLML 488
K M +R L ++ S++ N +L
Sbjct: 153 TKFMEVMRFLGFEIIDISLTTSNGAIL 179
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 25/58 (43%), Positives = 44/58 (75%)
Query: 347 AERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRES 404
+ER+RR ++ + YALR++VPN+++MDKAS++ DAV Y++EL+ + L+S + E+
Sbjct: 135 SERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEA 192
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 39/150 (26%), Positives = 68/150 (45%)
Query: 285 DQGCTVKSSTGQSSYTVDSEHSDSDCPLPPPVNNISAVEXXXXXXXXXXXXXXXETPLNH 344
D G T +S G T+D +H DS C P + + E H
Sbjct: 165 DVGFT-STSMGSHDNTID-DH-DSVCHSRPQMED---EEEKKAGGKSSVSTKRSRAAAIH 218
Query: 345 VEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRES 404
++ER+RR+K+N R L+ +VPN S+ DKAS+L + + Y+++L+ ++ + + S
Sbjct: 219 NQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSR--MNMPS 276
Query: 405 KKVKLEISDNHSTTTSVDQARPSSAGSGGG 434
+ + + S+ + P G G G
Sbjct: 277 MMLPMAMQQQQQLQMSL-MSNPMGLGMGMG 305
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 39/143 (27%), Positives = 74/143 (51%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPN--VSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
+NH+ ER RR ++N +LRA++P + R D+AS++ A++Y++ L+ I LESQ
Sbjct: 178 INHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQK 237
Query: 400 -LQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVN 458
Q++S +E + NH + S + + ++E ++ + ++VQ E
Sbjct: 238 RTQQQSNSEVVENALNHLSGISSNDLWTTLEDQT--CIPKIEATVIQNHVSLKVQCEKKQ 295
Query: 459 HPAAKLMSSLRDLDLQLHHASMS 481
K + SL L L + H +++
Sbjct: 296 GQLLKGIISLEKLKLTVLHLNIT 318
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 125 (49.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 26/72 (36%), Positives = 48/72 (66%)
Query: 348 ERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE---S 404
ER+RR LN R+ AL+ ++P+ S+ D+AS+L D + YI EL+ ++ +L+ L++R+
Sbjct: 219 ERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELK-YLVERKRCGG 277
Query: 405 KKVKLEISDNHS 416
+ E+ DN++
Sbjct: 278 RHKNNEVDDNNN 289
Score = 54 (24.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 438 EVETKIMGSDAMIRV-QSENVNHPAAKLMSSLRD-LDLQLHHAS 479
EV+ +I+ + I+V Q + +N L+S + D L L LHH +
Sbjct: 339 EVDVRIVDDEVTIKVVQKKKIN--CLLLVSKVLDQLQLDLHHVA 380
>UNIPROTKB|Q7F7Z2 [details] [associations]
symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
RefSeq:NP_001042087.1 UniGene:Os.1443
EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
Length = 258
Score = 132 (51.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 28/82 (34%), Positives = 48/82 (58%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQL-LQR 402
H EAER+RRE++N LR ++P+ +MDKA+LL+ V +++LK K ++ + L
Sbjct: 69 HSEAERRRRERINAHLTTLRRMIPDTKQMDKATLLARVVDQVKDLKRKASEITQRTPLPP 128
Query: 403 ESKKVKLEISDNHSTTTSVDQA 424
E+ +V +E + T + A
Sbjct: 129 ETNEVSIECFTGDAATAATTVA 150
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 118 (46.6 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 29/101 (28%), Positives = 59/101 (58%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPN--VSRMDKASLLSDAVSYIRELKVKIDDLESQ- 398
+ H+ ER RR ++N LR+++P V R D+AS++ A+ +++EL+ + LE+Q
Sbjct: 95 MTHIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGGAIDFVKELEQLLQSLEAQK 154
Query: 399 ---LLQ-----RESKKVKLEISDNHSTTTSVDQARPSSAGS 431
L+Q ++ ++ K + +D+ T++ DQ P++A +
Sbjct: 155 RTLLMQPPPPPQQQREPKCDAADS---TSAADQETPAAAAA 192
Score = 59 (25.8 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 426 PSSAGSGGGF----N----LEVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHH 477
P+ G GGG N ++E ++ + A IRV + K+++ L+ L L + H
Sbjct: 216 PAQDGGGGGGAAAENRAGVADIEVSLVETHASIRVMAARRPGQLLKMVAGLQALRLTVLH 275
Query: 478 ASMSCVNDLMLQDIVVR 494
+++ + L L I V+
Sbjct: 276 LNVTALGSLALYSISVK 292
>UNIPROTKB|Q5SMX4 [details] [associations]
symbol:P0498B01.36 "cDNA clone:J033115I17, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 EMBL:AP003417 EMBL:HQ858870
EMBL:AK102964 RefSeq:NP_001042293.1 UniGene:Os.32770 GeneID:4327325
KEGG:osa:4327325 eggNOG:NOG253236 OMA:GNNGFMC
ProtClustDB:CLSN2691168 Uniprot:Q5SMX4
Length = 439
Score = 136 (52.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 28/64 (43%), Positives = 44/64 (68%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQ 401
L H+ +ER+RREKLN F AL+AV+P S+ DK S+L A Y++ L+ K+ +LE + +
Sbjct: 253 LQHMISERKRREKLNDSFLALKAVLPPGSKKDKTSILIRAREYVKSLESKLSELEEKNRE 312
Query: 402 RESK 405
E++
Sbjct: 313 LEAR 316
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 134 (52.2 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 30/115 (26%), Positives = 64/115 (55%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPN--VSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
+ H+ ER RR ++N +LR+++P+ + R D+AS++ A+ +++ L+ ++ LE+Q
Sbjct: 193 MTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQK 252
Query: 400 LQRESKKVKLEI-SDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQ 453
++S K +I DN S ++ R S+ L++E ++ S +++Q
Sbjct: 253 RSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSS-KLKIEATVIESHVNLKIQ 306
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 105 (42.0 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVP--NVSRMDKASLLSDAVSYIRELKVKIDDLESQ 398
++H+ ER RR+++N LR+++P V R D+AS++ V YI+EL+ + LE++
Sbjct: 132 MSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAK 190
Score = 72 (30.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 19/79 (24%), Positives = 39/79 (49%)
Query: 426 PSSAGSGGGFN--LEVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCV 483
PSSA + G +V + G + +++ S A K++++L L L++ H S+ V
Sbjct: 324 PSSAAAIAGIVGVPDVRVEFAGPNLVLKTVSHRAPGQALKIIAALESLSLEILHVSICTV 383
Query: 484 NDLMLQDIVVRVPDGLRTE 502
+D + +++ G+ E
Sbjct: 384 DDATVLSFTIKI--GIECE 400
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 121 (47.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
H +ER+RR+++N + AL+ ++PN ++ DK S+L +A+ Y++ L++++ L + +
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLV--MGKGM 75
Query: 404 SKKVKLEISDN-HSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVN-HPA 461
+ V E+ H T Q P F + T+ S+ S+ N HP+
Sbjct: 76 APVVPPELQQYMHYITADPSQIPPIRPSEPRPFQITHATQQRQSNVESDFLSQMQNLHPS 135
Query: 462 AKLMSSLRDLDLQLH 476
+ LR LQL+
Sbjct: 136 EPPQNFLRPPKLQLY 150
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELK 389
+H EAER+RRE++N LR+++PN ++ DKASLL++ + +++ELK
Sbjct: 135 SHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELK 181
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLES-QLLQ 401
+H AE++RR+++N ALR +VPN ++DKA+LL+ + ++ELK K + Q L
Sbjct: 66 SHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESPIFQDLP 125
Query: 402 RESKKVKLE---ISDNHSTTTSV 421
E+ +V ++ ISD S T ++
Sbjct: 126 TEADEVTVQPETISDFESNTNTI 148
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 107 (42.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 25/96 (26%), Positives = 53/96 (55%)
Query: 348 ERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE--SK 405
ER+RR N RF+ L+ ++PN ++ +AS++ D + YI EL+ + +L+ + +++ ++
Sbjct: 28 ERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLVSELKYLVEKKKCGAR 87
Query: 406 KVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVET 441
+E+ DN +T + + + FN + T
Sbjct: 88 HNNIEV-DNKNTIYGTSKIEHPFSKNKNTFNCLIRT 122
>UNIPROTKB|Q5N9E6 [details] [associations]
symbol:P0505D12.13 "BHLH transcription factor-like protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 InterPro:IPR025610 Pfam:PF14215 EMBL:AP008207
EMBL:AP003270 EMBL:AK068033 RefSeq:NP_001044899.2 UniGene:Os.14287
EnsemblPlants:LOC_Os01g64560.1 GeneID:4324795 KEGG:osa:4324795
Uniprot:Q5N9E6
Length = 904
Score = 132 (51.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 49/184 (26%), Positives = 74/184 (40%)
Query: 41 WAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDXXXXXXXXXXXXXXXXXLDNNMERKRAI 100
W+YA+FW+ D+ +L L WGDGHY+ L R+
Sbjct: 20 WSYAVFWRATRAADSQRLKLVWGDGHYE----RAAGAPSISGFEAMDLLLKEKAAALRSG 75
Query: 101 SSIRGIQQSFMGHEMDLSMMDGGDVTDTEWFYVMSLTRSFGAGVGIPGRAQSSGSLVWLT 160
+ RG GH D + D D M+ + G G+ G+A +G W+
Sbjct: 76 TG-RG-GGGGEGHAADGAAGHSHDRVDALVHKAMA-QQVHVVGEGVIGQAALTGLHRWIV 132
Query: 161 GSHELQFYNCERAKEAQSH-------GIETFVCIPT-SCGVLELGSSDLIRENWGLVHQV 212
H++ CE E GI+T IP GV++LGS+ ++ E + V
Sbjct: 133 --HDI-VDECEEEDEVLLEMKGQFCAGIQTIAVIPVLPRGVIQLGSTKMVMEEAAFIDHV 189
Query: 213 KSLF 216
+SLF
Sbjct: 190 RSLF 193
Score = 47 (21.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 346 EAERQR---REKLNHRFYALRAVVPNVSRMDKASLLSDAVSYI 385
E+ R R R+ + R LR +VPN ++ +LL + ++
Sbjct: 698 ESARPRPKDRQMIQDRIKELREIVPNSAKCSIDTLLEKTIKHM 740
Score = 38 (18.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 397 SQLLQRESKKVKLEISDNHST-TTSVDQARPSSAGSGG 433
SQ + +++L + +NHS + S+ + S + S G
Sbjct: 641 SQTQESYKSQIRLWVENNHSVGSDSLSTGQASDSLSTG 678
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 24/55 (43%), Positives = 40/55 (72%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLE 396
L H+ +ER+RREKLN F+ LR+++P S+ DK ++L +A Y++ L+ +I +LE
Sbjct: 265 LYHMMSERKRREKLNDSFHTLRSLLPPCSKKDKTTVLINAAKYLKSLETEITELE 319
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 125 (49.1 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 21/47 (44%), Positives = 37/47 (78%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELK 389
+H EAER+RR+++N LR+++PN ++ DKASLL++ + +++ELK
Sbjct: 124 SHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELK 170
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 125 (49.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 21/47 (44%), Positives = 37/47 (78%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELK 389
+H EAER+RR+++N LR+++PN ++ DKASLL++ + +++ELK
Sbjct: 109 SHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELK 155
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 119 (46.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 19/52 (36%), Positives = 39/52 (75%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDL 395
H +E++RR K+N + AL+ ++PN ++ DKAS+L +A+ Y+++L++++ L
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 123 (48.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 20/52 (38%), Positives = 40/52 (76%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDL 395
H +E++RR ++N + AL++++PN S+ DKAS+L DA+ Y+++L++++ L
Sbjct: 37 HNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 88
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 124 (48.7 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 33/100 (33%), Positives = 57/100 (57%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMD-KASLLSDAVSYIRELKVKIDDLESQLLQ 401
NH AER RREK++ R L+ +VP S++ KA +L + ++Y++ L+ +++ L S L
Sbjct: 186 NHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEFL-SMKLS 244
Query: 402 RESKKVKLEISD--NHSTTTSVDQARPSSAGSGGGFNLEV 439
+ ++ L+I N+S +PSSA G F+ E+
Sbjct: 245 AVNPRIDLDIESLVNNSKDVLRFPGQPSSAPMGFSFSTEM 284
>UNIPROTKB|Q9FTQ1 [details] [associations]
symbol:P0665D10.21 "DNA binding protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002861 EMBL:AP002745 RefSeq:NP_001042409.1 UniGene:Os.26488
STRING:Q9FTQ1 GeneID:4324583 KEGG:osa:4324583 OMA:VRFTFLI
ProtClustDB:CLSN2691217 Uniprot:Q9FTQ1
Length = 267
Score = 121 (47.7 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELK 389
+H EAER+RRE++N LR +VP +MDKA+LL++ V ++++LK
Sbjct: 81 SHSEAERRRRERINAHLATLRTMVPCTDKMDKAALLAEVVGHVKKLK 127
>TAIR|locus:2063203 [details] [associations]
symbol:AT2G41130 "AT2G41130" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009941
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC004261 EMBL:AK119059 EMBL:AY074639 IPI:IPI00526770
PIR:T02106 RefSeq:NP_181646.1 UniGene:At.37024
ProteinModelPortal:O80674 SMR:O80674 EnsemblPlants:AT2G41130.1
GeneID:818712 KEGG:ath:AT2G41130 TAIR:At2g41130 eggNOG:NOG239121
HOGENOM:HOG000006083 InParanoid:O80674 OMA:RERIKSH PhylomeDB:O80674
ProtClustDB:CLSN2683662 Genevestigator:O80674 Uniprot:O80674
Length = 253
Score = 120 (47.3 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELK---VKIDDLESQL 399
NH EAER+RRE++N LR V+ S+ DKA+LL+ V +RELK ++ D + L
Sbjct: 70 NHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLETSDSDQTL 129
Query: 400 LQRESKKVKL 409
L E+ ++ +
Sbjct: 130 LPSETDEISV 139
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 347 AERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
A R+RR +++ RF LR++VP S+MD S+L A+ Y++ LK +I ++ L+Q E
Sbjct: 60 AARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKTQISLHQAALMQHE 116
>TAIR|locus:2146663 [details] [associations]
symbol:BHLH101 "AT5G04150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010106 "cellular response to iron ion starvation"
evidence=IEP] [GO:0055072 "iron ion homeostasis" evidence=IGI]
InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0055072
HOGENOM:HOG000238662 EMBL:AJ519810 EMBL:AL391716 EMBL:DQ446915
EMBL:DQ653262 IPI:IPI00544479 RefSeq:NP_196035.1 UniGene:At.33170
ProteinModelPortal:Q9FYE6 SMR:Q9FYE6 PaxDb:Q9FYE6 PRIDE:Q9FYE6
EnsemblPlants:AT5G04150.1 GeneID:830293 KEGG:ath:AT5G04150
TAIR:At5g04150 eggNOG:NOG286867 InParanoid:Q9FYE6 OMA:QRIAANW
PhylomeDB:Q9FYE6 ProtClustDB:CLSN2914826 Genevestigator:Q9FYE6
Uniprot:Q9FYE6
Length = 240
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 47/175 (26%), Positives = 83/175 (47%)
Query: 339 ETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASL---LSDAVSYIRELKVKIDDL 395
E LNH +ER RR KLN + +LRA++P + K S+ ++ V YI E K ++ L
Sbjct: 65 EKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQRL 124
Query: 396 ---ESQLLQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGS------ 446
+ +LL+R S+K E N + S+D + + + E+ +I S
Sbjct: 125 SRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIAANWLTDTEIAVQIATSKWTSVS 184
Query: 447 DAMIRVQSENVNH-PAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDGLR 500
D ++R++ +N + +SS + LH M + L++++ + GLR
Sbjct: 185 DMLLRLEENGLNVISVSSSVSSTARIFYTLH-LQMRGDCKVRLEELINGMLLGLR 238
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 113 (44.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 20/56 (35%), Positives = 41/56 (73%)
Query: 348 ERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
ER+RR N RF+ L+ ++PN +++D+AS++ +A+ YI+EL I++ + L++++
Sbjct: 252 ERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFK-MLVEKK 306
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 284 KDQGCTVKSSTGQSSYTVDSEHSDSDCPLPPP 315
++ GC ++ + TV+S S ++ P PPP
Sbjct: 10 EEMGCFDPNTPAE--VTVESSFSQAEPPPPPP 39
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 438 EVETKIMGSDAMIR-VQSENVNHPAAKLMSS--LRDLDLQLHHAS 479
EV+ +I+ + I+ VQ + +N L ++ L L L LHH +
Sbjct: 369 EVDVRIIDDEVTIKLVQKKKIN---CLLFTTKVLDQLQLDLHHVA 410
>TAIR|locus:2012146 [details] [associations]
symbol:RGE1 "AT1G49770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009790 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011807 EMBL:AF488623 IPI:IPI00539453 PIR:D96534
RefSeq:NP_175399.2 UniGene:At.38170 ProteinModelPortal:Q9FXA3
SMR:Q9FXA3 EnsemblPlants:AT1G49770.1 GeneID:841400
KEGG:ath:AT1G49770 TAIR:At1g49770 eggNOG:NOG272533
HOGENOM:HOG000272699 InParanoid:Q9FXA3 OMA:DHEIHIW PhylomeDB:Q9FXA3
ProtClustDB:CLSN2918353 Genevestigator:Q9FXA3 Uniprot:Q9FXA3
Length = 308
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 37/148 (25%), Positives = 69/148 (46%)
Query: 287 GCTVKSSTGQSSYTVDSEHSDSDCPLPPPVNNISAVEXXXXXXXXXXXXXXXETPLN--H 344
G + +G ++ E S P P + V+ E+P + H
Sbjct: 15 GISNSDDSGGGCKRIEKEPLPSHPSHPSPEIQTTTVKKGKKRTKRNDKNHEEESPDHEIH 74
Query: 345 VEAERQRREKLNHRFYALRAVVPNVS-RMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
+ ER+RR+K+ F L A++P + + DK++++ +AVS I+ L+ + LE Q L+
Sbjct: 75 IWTERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLE-- 132
Query: 404 SKKVKLEISDNHSTTTSVDQARPSSAGS 431
K++ + ++T T+ PSS+ S
Sbjct: 133 --KLQYSSASTNTTPTTTFAYAPSSSSS 158
>UNIPROTKB|Q75IR0 [details] [associations]
symbol:OSJNBb0099P06.13 "Putative uncharacterized protein
OSJNBb0099P06.13" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR002912
InterPro:IPR011598 Pfam:PF00010 Pfam:PF01842 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0016597 GO:GO:0008152
EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC124144
EMBL:AC134341 EMBL:AK110619 RefSeq:NP_001054739.1 UniGene:Os.56950
EnsemblPlants:LOC_Os05g07120.1 EnsemblPlants:LOC_Os05g07120.2
GeneID:4337905 KEGG:osa:4337905 eggNOG:NOG309133
HOGENOM:HOG000241234 OMA:VSCDDRP ProtClustDB:CLSN2691085
Uniprot:Q75IR0
Length = 271
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVK 391
H EAER+RRE++N LR ++P+ +MDKA+LL+ V+ ++ LK +
Sbjct: 70 HSEAERRRRERINAHLATLRRILPDAKQMDKATLLASVVNQVKHLKTR 117
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLL--- 400
H AER RRE++ R +L+ +VPN ++ DKAS+L + + Y++ L++++ L L
Sbjct: 141 HSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGA 200
Query: 401 QRESKKVKLEISDNHSTTTSVDQAR 425
S ++ + +H T+S +A+
Sbjct: 201 ASASSQISEDAGGSHENTSSSGEAK 225
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 19/52 (36%), Positives = 40/52 (76%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDL 395
H +E++RR K+N + AL++++PN ++ DKAS+L +A+ Y+++L++++ L
Sbjct: 108 HNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 159
>TAIR|locus:2164605 [details] [associations]
symbol:AT5G56960 "AT5G56960" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB024035 IPI:IPI00545938 RefSeq:NP_200506.1 UniGene:At.55597
ProteinModelPortal:Q9LTS4 SMR:Q9LTS4 EnsemblPlants:AT5G56960.1
GeneID:835798 KEGG:ath:AT5G56960 TAIR:At5g56960 eggNOG:NOG254434
HOGENOM:HOG000095216 InParanoid:Q9LTS4 OMA:RENATTH PhylomeDB:Q9LTS4
ProtClustDB:CLSN2687375 Genevestigator:Q9LTS4 Uniprot:Q9LTS4
Length = 466
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 30/73 (41%), Positives = 51/73 (69%)
Query: 340 TPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
T L H+ +ER+RREKLN F ALR+++P ++ DKAS+LS A + L+ +I S+L
Sbjct: 286 TQLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEI----SKL 341
Query: 400 LQRESKKVKLEIS 412
L+R +++V+ +++
Sbjct: 342 LER-NREVEAKLA 353
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 20/49 (40%), Positives = 38/49 (77%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKI 392
H +ER+RR+++N R AL+ ++P+ SR DKAS+L +A+ Y++ L++++
Sbjct: 261 HNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQL 309
>TAIR|locus:2040287 [details] [associations]
symbol:BHLH100 "basic helix-loop-helix protein 100"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010106 "cellular response to iron
ion starvation" evidence=IEP] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0055072 "iron ion homeostasis"
evidence=IGI] InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005662 GO:GO:0055072 HSSP:P61244 EMBL:AY074635 EMBL:AF488626
IPI:IPI00522524 IPI:IPI00548751 PIR:E84839 RefSeq:NP_181657.1
RefSeq:NP_850349.1 UniGene:At.37027 ProteinModelPortal:Q9ZVB5
SMR:Q9ZVB5 EnsemblPlants:AT2G41240.1 GeneID:818723
KEGG:ath:AT2G41240 TAIR:At2g41240 eggNOG:NOG256140
HOGENOM:HOG000238662 InParanoid:Q9ZVB5 OMA:HNASERE PhylomeDB:Q9ZVB5
ProtClustDB:CLSN2683761 Genevestigator:Q9ZVB5 Uniprot:Q9ZVB5
Length = 242
Score = 115 (45.5 bits), Expect = 0.00033, P = 0.00033
Identities = 37/144 (25%), Positives = 73/144 (50%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASL---LSDAVSYIRELKVKIDDLESQ 398
LNH +ER+RR+K+N F +LR+ +P ++ K S+ +S A+ YI EL+ ++ +
Sbjct: 64 LNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQV-----K 118
Query: 399 LLQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVN 458
L ++ +++ +IS + DQ S G + T++ ++ M+++ S
Sbjct: 119 KLMKKKEELSFQISGQRDLVYT-DQNSKSEEGVTSYASTVSSTRLSETEVMVQISSLQTE 177
Query: 459 HPA-AKLMSSLRDLDLQLHHASMS 481
+ ++S + + L L AS S
Sbjct: 178 KCSFGNVLSGVEEDGLVLVGASSS 201
>UNIPROTKB|Q6K4B1 [details] [associations]
symbol:OJ1595_D08.4 "Os09g0468700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 eggNOG:NOG281753 EMBL:AP005399
EMBL:AP005574 RefSeq:NP_001175879.1 UniGene:Os.98668
EnsemblPlants:LOC_Os09g29360.1 GeneID:9267272 KEGG:osa:9267272
Uniprot:Q6K4B1
Length = 351
Score = 101 (40.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 19/64 (29%), Positives = 40/64 (62%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPN--VSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
+ H+ ER RR+++N LR+++P R D+AS++ A+++++EL+ + LE++
Sbjct: 134 MTHIAVERNRRKQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINFVKELEQLLQSLEARK 193
Query: 400 LQRE 403
R+
Sbjct: 194 SSRQ 197
Score = 59 (25.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 18/74 (24%), Positives = 35/74 (47%)
Query: 424 ARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCV 483
A ++GS +VE ++ S A +RV S +L+ +L+ L + H +M+
Sbjct: 248 AEAEASGSKPSAVADVEVTMVESHANLRVLSRRRPRQLLRLVVALQGHRLTVLHLNMTSA 307
Query: 484 NDLMLQDIVVRVPD 497
++L ++V D
Sbjct: 308 GHMVLYSFSLKVED 321
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 27/78 (34%), Positives = 48/78 (61%)
Query: 347 AERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRESKK 406
A RQRRE+++ R L+ +VP ++MD AS+L +A +Y+R LK +I +L++ L +R
Sbjct: 378 AARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQT-LDRRNYPN 436
Query: 407 VKLEISDNHSTTTSVDQA 424
+ I+ +TT + +
Sbjct: 437 AAMSINTAAATTMATSSS 454
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 117 (46.2 bits), Expect = 0.00039, P = 0.00039
Identities = 35/143 (24%), Positives = 71/143 (49%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPN--VSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
+ H+ ER RR ++N LR+++P + D+AS++ A+ +I+EL+ K+ LE+Q
Sbjct: 88 MTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQ- 146
Query: 400 LQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVNH 459
+ + K+ ++ + S ++ +Q P S L + + S EN N
Sbjct: 147 -KHHNAKLNQSVTSSTSQDSNGEQENPHQPSS-----LSLSQFFLHS---YDPSQENRNG 197
Query: 460 PAAKLMSSLRDLDLQL--HHASM 480
+ + + + DL++ L HA++
Sbjct: 198 STSSVKTPMEDLEVTLIETHANI 220
>UNIPROTKB|Q75KV9 [details] [associations]
symbol:OJ1365_D05.18 "Putative helix-loop-helix DNA-binding
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC096855 RefSeq:NP_001051221.1 UniGene:Os.59419 STRING:Q75KV9
EnsemblPlants:LOC_Os03g53020.1 GeneID:4334060 KEGG:osa:4334060
HOGENOM:HOG000083364 OMA:TEMNVET ProtClustDB:CLSN2694283
Uniprot:Q75KV9
Length = 299
Score = 116 (45.9 bits), Expect = 0.00042, P = 0.00042
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
H+ ERQRREKL+ + L A+V + S+ DK S++ A YI ELKV D L QR
Sbjct: 132 HMMRERQRREKLSQSYADLYAMVSSRSKGDKNSIVQSAAIYIHELKVARDQL-----QRR 186
Query: 404 SKKVKLEISDNHS----TTTSVDQARPSSA 429
++++K +I + T + PSS+
Sbjct: 187 NEELKAQIMGHDEQQPCVTVQFEVDEPSSS 216
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 119 (46.9 bits), Expect = 0.00051, P = 0.00050
Identities = 18/49 (36%), Positives = 39/49 (79%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKI 392
H +ER+RR+++N + AL+ ++PN +++DKAS+L +A+ Y++ L++++
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQV 396
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 40/122 (32%), Positives = 63/122 (51%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLE-SQL--- 399
H AER RREK++ R L+ +VPN ++ DKAS+L + + Y++ L++++ L S+L
Sbjct: 250 HSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGAP 309
Query: 400 -----LQRESKKVKLEISDNHSTTTS-VDQARPSSAGS--GGGFNLEVETKIMGSDAMIR 451
L RES+ E N S + S + Q P S F EV K+M + +
Sbjct: 310 GAVLPLLRESQT---ECHSNPSLSASTISQGPPDMPDSEDSSAFEQEV-VKLMETSIISA 365
Query: 452 VQ 453
+Q
Sbjct: 366 MQ 367
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
Identities = 19/49 (38%), Positives = 38/49 (77%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKI 392
H +ER+RR+++N R AL+ ++P+ S+ DKAS+L +A+ Y++ L++++
Sbjct: 262 HNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQL 310
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 116 (45.9 bits), Expect = 0.00063, P = 0.00063
Identities = 18/52 (34%), Positives = 40/52 (76%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDL 395
H +E++RR ++N + AL++++PN ++ DKAS+L +A+ Y+++L++++ L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 117 (46.2 bits), Expect = 0.00070, P = 0.00070
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 348 ERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQR 402
ER+RRE+LN +F LR + PN ++ D+AS++ DA+ YI EL + +L+ + Q+
Sbjct: 270 ERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAIEYIDELNRTVKELKILVEQK 324
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 112 (44.5 bits), Expect = 0.00071, P = 0.00071
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 347 AERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQ 398
A R RRE+++ R L+ +VP ++MD AS+L +A+ Y++ LK ++ LE Q
Sbjct: 136 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEQ 187
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 118 (46.6 bits), Expect = 0.00073, P = 0.00073
Identities = 18/49 (36%), Positives = 39/49 (79%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKI 392
H +ER+RR+++N + AL+ ++PN +++DKAS+L +A+ Y++ L++++
Sbjct: 317 HNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQV 365
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 115 (45.5 bits), Expect = 0.00074, P = 0.00073
Identities = 29/91 (31%), Positives = 51/91 (56%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
H AER RRE++ R AL+ +VPN ++ DKAS+L + + Y++ L++++ L L
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGA 208
Query: 404 SKKVKLEISD---NHSTTTSVDQARPSSAGS 431
+ V +IS+ +H +S +AG+
Sbjct: 209 AS-VSSQISEAGGSHGNASSAMVGGSQTAGN 238
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 515 419 0.00082 118 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 101
No. of states in DFA: 618 (66 KB)
Total size of DFA: 262 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.90u 0.13s 34.03t Elapsed: 00:00:01
Total cpu time: 33.91u 0.13s 34.04t Elapsed: 00:00:01
Start: Fri May 10 23:59:46 2013 End: Fri May 10 23:59:47 2013
WARNINGS ISSUED: 1