BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046178
(515 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 323 bits (827), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 208/567 (36%), Positives = 300/567 (52%), Gaps = 68/567 (11%)
Query: 1 MEDLIISPSSSSSLVSLTP-----ETPPPTLQQRLQFIVQSQPEWWAYAIFWQTI----- 50
ME I S SSL P + LQQRLQ +++ E W YA+FWQ+
Sbjct: 33 MEAFIGGGSDHSSLFPPLPPPPLPQVNEDNLQQRLQALIEGANENWTYAVFWQSSHGFAG 92
Query: 51 -SNDDNGQLFLAWGDGHYQGTKDASPRARMSMPAPAPGAALDNNMERKRAISSIRGIQQS 109
N++N + L WGDG+Y+G ++ S R + S PA A RKR I + + S
Sbjct: 93 EDNNNNNTVLLGWGDGYYKGEEEKS-RKKKSNPASAA-----EQEHRKRVIRELNSLI-S 145
Query: 110 FMGHEMDLSMMDGGD--VTDTEWFYVMSLTRSFGAGVGIPGRAQSSGSLVWLTGSHELQF 167
D + GD VTDTEWF+++S+T+SF G G+PG+A S+ +WL+GS+ L
Sbjct: 146 GGVGGGD----EAGDEEVTDTEWFFLVSMTQSFVKGTGLPGQAFSNSDTIWLSGSNALAG 201
Query: 168 YNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLIRENWGLVHQVKSLF-----GSDLIT 222
+CERA++ Q +G++T VC+ T GV+ELGSS++I ++ LV +V + F G + +
Sbjct: 202 SSCERARQGQIYGLQTMVCVATENGVVELGSSEIIHQSSDLVDKVDTFFNFNNGGGEFGS 261
Query: 223 KPLNPNPTPAAPPMHFLDRNISFADIGIIAGVQQEQEEEEEEEEELSRP----------- 271
N NP + D G++A + S+P
Sbjct: 262 WAFNLNPDQGENDPGLWISEPNGVDSGLVAAPVMNNGGNDSTSNSDSQPISKLCNGSSVE 321
Query: 272 -----------------------EEEDQNKVKKPRKDQGCTVKSSTGQSSYTVDSEHSDS 308
EE+ NK + P + + S T S DS HSD
Sbjct: 322 NPNPKVLKSCEMVNFKNGIENGQEEDSSNKKRSPVSNNEEGMLSFT--SVLPCDSNHSDL 379
Query: 309 DCPLPPPV--NNISAVEKRTPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVV 366
+ + N + ++ P+KRGRKP GRE PLNHVEAERQRREKLN RFY+LRAVV
Sbjct: 380 EASVAKEAESNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVV 439
Query: 367 PNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRESKKVKLEISDNHSTTTSVDQARP 426
PNVS+MDKASLL DA+SYI ELK K+ ES + + K++ + + + +SV +
Sbjct: 440 PNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQ-KQIDVMNKEAGNAKSSVKDRKC 498
Query: 427 SSAGSGGGFNLEVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDL 486
+ S +EV+ KI+G DAMIR+Q NHP AK M +L++LDL+++HAS+S VNDL
Sbjct: 499 LNQESSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDL 558
Query: 487 MLQDIVVRVPDGLRTEDALRSALLRRL 513
M+Q V++ + T+D L+ AL ++
Sbjct: 559 MIQQATVKMGNQFFTQDQLKVALTEKV 585
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 258 bits (659), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 190/504 (37%), Positives = 276/504 (54%), Gaps = 107/504 (21%)
Query: 12 SSLVSLTPETPPPTLQQRLQFIVQSQPEWWAYAIFWQTISNDDNGQLFLAWGDGHYQGTK 71
+++VS +P P LQQ+L+F+V++ P+ WAY IFWQ + +D + + +L W DGH+ G K
Sbjct: 23 AAIVSSSP--PDLVLQQKLRFVVETSPDRWAYVIFWQKMFDDQSDRSYLVWVDGHFCGNK 80
Query: 72 DASPRARMSMPAPAPGAALDNNMERKRAISSIRGIQQSFMGHEMDLSMMDGGDVTDTEWF 131
+ NN + +SI E +L MMDGGD D E F
Sbjct: 81 N-------------------NNSQENYTTNSI----------ECEL-MMDGGD--DLELF 108
Query: 132 YVMSLTRSFGAGVGIPGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSC 191
Y S +G P + S SLVWLTG EL+F N ERAKEA HG+ T V IP +
Sbjct: 109 YAASF---YGEDRS-PRKEVSDESLVWLTGPDELRFSNYERAKEAGFHGVHTLVSIPINN 164
Query: 192 GVLELGSSDLIRENWGLVHQVKSLFGSDLITKPLNPNPTPAAPPMHFLDRNISFADIGII 251
G++ELGSS+ I +N +++VKS+FGS TK + N T + P D + S
Sbjct: 165 GIIELGSSESIIQNRNFINRVKSIFGSGKTTK--HTNQTGSYPKPAVSDHSKS------- 215
Query: 252 AGVQQEQEEEEEEEEELSRPEEEDQNKVKKPRKDQGCTVKSSTGQSSYTVDSEHSDSDCP 311
G QQ E K+ RK + V ++T + +
Sbjct: 216 -GNQQFGSER------------------KRRRKLETTRVAAATKEKHH------------ 244
Query: 312 LPPPVNNISAVEKRTPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSR 371
P ++++ A ++R K LNH RFYALRA+VP VSR
Sbjct: 245 -PAVLSHVEAEKQRREK-------------LNH-------------RFYALRAIVPKVSR 277
Query: 372 MDKASLLSDAVSYIRELKVKIDDLESQLLQ-RESKKVKLEISDNHSTTTSVD-QARPSSA 429
MDKASLLSDAVSYI LK KIDDLE+++ + + ++ KL+ S ++++ +SV+ Q +
Sbjct: 278 MDKASLLSDAVSYIESLKSKIDDLETEIKKMKMTETDKLDNSSSNTSPSSVEYQVNQKPS 337
Query: 430 GSGGGFNLEVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQ 489
S G +LEV+ KI+G +A+IRVQ+ENVNHP + LMS+L ++D ++ HA+ S ++ +M+Q
Sbjct: 338 KSNRGSDLEVQVKIVGEEAIIRVQTENVNHPTSALMSALMEMDCRVQHANASRLSQVMVQ 397
Query: 490 DIVVRVPDGLRTEDALRSALLRRL 513
D+VV VP+GLR+ED LR+ L+R L
Sbjct: 398 DVVVLVPEGLRSEDRLRTTLVRTL 421
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 188/520 (36%), Positives = 276/520 (53%), Gaps = 73/520 (14%)
Query: 25 TLQQRLQFIVQSQPEWWAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDASPRARMSMPAP 84
TL +RL ++ E W+YAIFW+ +D +G+ L WGDG Y G + R R+
Sbjct: 33 TLPKRLHAVLNGTHEPWSYAIFWKPSYDDFSGEAVLKWGDGVYTGGNEEKTRGRLRRKK- 91
Query: 85 APGAALDNNMERKRAISSIRGIQ-----QSFMGHEMDLSMMDGGDVTDTEWFYVMSLTRS 139
L + E++R + IR + ++F E D+S D +VTD EWF+++S+T S
Sbjct: 92 ---TILSSPEEKERRSNVIRELNLMISGEAFPVVEDDVSDDDDVEVTDMEWFFLVSMTWS 148
Query: 140 FGAGVGIPGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGS- 198
FG G G+ G+A +S + V +TGS + C+RAK+ G++T +CIP+ GVLEL S
Sbjct: 149 FGNGSGLAGKAFASYNPVLVTGSDLIYGSGCDRAKQGGDVGLQTILCIPSHNGVLELAST 208
Query: 199 ------SDLIRENWGLVHQVKSLFG-----SDLITKPL----------NPNPTPAAPPMH 237
SDL L K G S+L L NPNP+P ++
Sbjct: 209 EEIRPNSDLFNRIRFLFGGSKYFSGAPNSNSELFPFQLESSCSSTVTGNPNPSP----VY 264
Query: 238 FLDR-NISFADIGIIAGVQQEQEEEEEEEEELSRPEEEDQNKVKKPRKDQGCTVKSSTGQ 296
+R N++F+ L+R D G VK S
Sbjct: 265 LQNRYNLNFST----------------SSSTLARAPCGDVLSF-------GENVKQSFEN 301
Query: 297 SSYTVDSEHSDSDCPLPPPVNNISAVEKRTPKKRGRKPGLGRETPLNHVEAERQRREKLN 356
+ S+ + P + +EK+ KKRGRKP GR+ PLNHVEAER RREKLN
Sbjct: 302 RNPNTYSDQIQNVVP-----HATVMLEKKKGKKRGRKPAHGRDKPLNHVEAERMRREKLN 356
Query: 357 HRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDD--LESQLLQRESKKVKLEISDN 414
HRFYALRAVVPNVS+MDK SLL DAV YI ELK K ++ LE ++ + ++K EI+
Sbjct: 357 HRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIEIQFNELK-EIAGQ 415
Query: 415 HSTTTSVDQARPSSAGSGGGFNLEVETKIMGS-DAMIRVQSENVNHPAAKLMSSLRDLDL 473
+ SV + ++ +++E KIM S DAM+RV+S +HP A+LM++L DL+L
Sbjct: 416 RNAIPSVCKYEEKASEM-----MKIEVKIMESDDAMVRVESRKDHHPGARLMNALMDLEL 470
Query: 474 QLHHASMSCVNDLMLQDIVVRVPDGLRTEDALRSALLRRL 513
+++HAS+S +NDLM+Q V++ + ++ LR L+ ++
Sbjct: 471 EVNHASISVMNDLMIQQANVKMGLRIYKQEELRDLLMSKI 510
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 171/515 (33%), Positives = 259/515 (50%), Gaps = 71/515 (13%)
Query: 25 TLQQRLQFIV---QSQPEWWAYAIFWQ-TISNDDNGQLFLAWGDGHY-QGTKDASPRARM 79
TL ++L +V S+ W YAIFWQ T+S +GQ L WGDG + ++ +
Sbjct: 47 TLNKKLSSLVDWPNSENFSWNYAIFWQQTMSR--SGQQVLGWGDGCCREPNEEEESKVVR 104
Query: 80 SMPAPAPGAALDNNMERKRAISSIRGIQQSFMGHEMDLSMMDGGDVTDTEWFYVMSLTRS 139
S GA + + ++ + ++ + + F G + D + VT TE F++ S+
Sbjct: 105 SYNFNNMGAEEETWQDMRKRV--LQKLHRLFGGSDEDNYALSLEKVTATEIFFLASMYFF 162
Query: 140 FGAGVGIPGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSS 199
F G G PGR SSG VWL+ + + C R+ A+S GI T V +PT GVLELGS
Sbjct: 163 FNHGEGGPGRCYSSGKHVWLSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGVLELGSV 222
Query: 200 DLIRENWGLVHQVKSLFGSDLITKPLNPNPTPAAPPMHFLDRNISFA-DIGIIAGVQQEQ 258
+ EN GLV V++LF + + + T +H L F D+ ++
Sbjct: 223 WSLPENIGLVKSVQALFMRRVTQPVMVTSNTNMTGGIHKL-----FGQDLSGAHAYPKKL 277
Query: 259 EEEEEEEEELSRPEEEDQNKVKKP-------RKD----------------------QGCT 289
E +E + E N K P R D G +
Sbjct: 278 EVRRNLDERFTPQSWEGYNNNKGPTFGYTPQRDDVKVLENVNMVVDNNNYKTQIEFAGSS 337
Query: 290 VKSSTGQSSYTVDSEHSDSDCPLPPPVN------NISAVEKRTPKKRGRKPGLGRETPLN 343
V +S+ S+ T E S+S C PV+ +S V+++ P+KRGRKP GRE PLN
Sbjct: 338 VAASSNPSTNT-QQEKSES-CTEKRPVSLLAGAGIVSVVDEKRPRKRGRKPANGREEPLN 395
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
HVEAERQRREKLN RFYALR+VVPN+S+MDKASLL DA+SYI+EL+ K+ +E +
Sbjct: 396 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDE----- 450
Query: 404 SKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVNHPAAK 463
+V + S + S T +V+++ EV+ + M + ++RV S +HPA++
Sbjct: 451 --RVGTDKSLSESNTITVEESP------------EVDIQAMNEEVVVRVISPLDSHPASR 496
Query: 464 LMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDG 498
++ ++R+ ++ L A +S D M V++ +G
Sbjct: 497 IIQAMRNSNVSLMEAKLSLAEDTMFHTFVIKSNNG 531
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 157/214 (73%), Gaps = 9/214 (4%)
Query: 302 DSEHSDSDCPLPPPVNNISAVEKRTPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYA 361
+S+HSD + + V AVEKR PKKRGRKP GRE PLNHVEAERQRREKLN RFYA
Sbjct: 416 ESDHSDLEASVVKEV----AVEKR-PKKRGRKPANGREEPLNHVEAERQRREKLNQRFYA 470
Query: 362 LRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRESK--KVKLEISDNHSTTT 419
LRAVVPNVS+MDKASLL DA++YI ELK K+ ES+ LQ +++ +VKLE++ ++ +
Sbjct: 471 LRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQLEEVKLELAGRKASAS 530
Query: 420 SVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHAS 479
D + SS S +E+E KI+G DAMIRV+S NHPAA+LMS+L DL+L+++HAS
Sbjct: 531 GGDMS--SSCSSIKPVGMEIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHAS 588
Query: 480 MSCVNDLMLQDIVVRVPDGLRTEDALRSALLRRL 513
MS VNDLM+Q V++ + T++ LR++L+ ++
Sbjct: 589 MSVVNDLMIQQATVKMGFRIYTQEQLRASLISKI 622
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 124/206 (60%), Gaps = 28/206 (13%)
Query: 25 TLQQRLQFIVQSQPEWWAYAIFWQTISNDDNGQLFLAWGDGHYQGTKD-ASPRARMSMPA 83
TLQQRLQ +++ E W YAIFWQ S D +G L WGDG+Y+G +D A+PR R S P
Sbjct: 67 TLQQRLQALIEGTHEGWTYAIFWQP-SYDFSGASVLGWGDGYYKGEEDKANPRRRSSSP- 124
Query: 84 PAPGAALDNNMERKRAISSIRGIQQSFMGHEMDLSMMDGG----------DVTDTEWFYV 133
P + + RK+ + + S++ GG +VTDTEWF++
Sbjct: 125 --PFSTPADQEYRKKVLRELN-------------SLISGGVAPSDDAVDEEVTDTEWFFL 169
Query: 134 MSLTRSFGAGVGIPGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGV 193
+S+T+SF G G+ G+A ++G+ VW++GS +L CERAK+ G+ T CIP++ GV
Sbjct: 170 VSMTQSFACGAGLAGKAFATGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPSANGV 229
Query: 194 LELGSSDLIRENWGLVHQVKSLFGSD 219
+E+GS++ IR++ L+++V+ LF D
Sbjct: 230 VEVGSTEPIRQSSDLINKVRILFNFD 255
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 248/525 (47%), Gaps = 94/525 (17%)
Query: 3 DLIISPSSSSSLVSLTPETPPPT---LQQRLQFIVQSQPEWWAYAIFWQTISNDDNGQLF 59
D IS +S+S+ +L+ PP+ LQQ L+ +V+ W YA+FW + + +
Sbjct: 25 DFFISTASASN-TALSKLVSPPSDSNLQQGLRHVVEGSD--WDYALFWLASNVNSSDGCV 81
Query: 60 LAWGDGHYQGTKDASPRARMSMPAPAPGAALDNNMERKRAISSIRGIQQSFMGHEMDLSM 119
L WGDGH + K AS G E KR + +R + SF+G + D +
Sbjct: 82 LIWGDGHCRVKKGAS------------GEDYSQQDEIKRRV--LRKLHLSFVGSDEDHRL 127
Query: 120 MDGGDVTDTEWFYVMSLTRSFGAGVGIPGRAQS--SGSLVWLTGSHELQFYNCERAKEAQ 177
+ G +TD + FY+ SL SF G A + SG +W Y R+ A+
Sbjct: 128 VKSGALTDLDMFYLASLYFSFRCDTNKYGPAGTYVSGKPLWAADLPSCLSYYRVRSFLAR 187
Query: 178 SHGIETFVCIPTSCGVLELGSSDLIRENWGLVHQVKSLFG-SDLITKPLNPNPTPAAPPM 236
S G +T + +P + GV+ELGS I E+ ++ VKS+FG SD + P
Sbjct: 188 SAGFQTVLSVPVNSGVVELGSLRHIPEDKSVIEMVKSVFGGSDFVQAKEAPK-------- 239
Query: 237 HFLDRNISFADIGIIAGVQQEQEEEEEEEEELSRPEEEDQNKVKKPRKDQGCTVKS---- 292
R +S ++P N K D G +++S
Sbjct: 240 -IFGRQLSLGG---------------------AKPRSMSINFSPKTEDDTGFSLESYEVQ 277
Query: 293 STGQSSYTVDSEHSDSDCPLPPPVNNISAVEKRTPKKRGRKPGLGRETPLNHVEAERQRR 352
+ G S+ E + + +++ P+KRGRKP GRE LNHVEAERQRR
Sbjct: 278 AIGGSNQVYGYEQGKDE--------TLYLTDEQKPRKRGRKPANGREEALNHVEAERQRR 329
Query: 353 EKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIREL--KVKIDDLESQLLQRESKKVKLE 410
EKLN RFYALRAVVPN+S+MDKASLL+DA++YI ++ K+++ + E Q+++R
Sbjct: 330 EKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQIMKRRES----- 384
Query: 411 ISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVNHPAAKLMSSLRD 470
+Q P+ EV+ + DA++R+ HP +K++ +LR+
Sbjct: 385 -----------NQITPA----------EVDYQQRHDDAVVRLSCPLETHPVSKVIQTLRE 423
Query: 471 LDLQLHHASMSCVNDLMLQDIVVRVPDGLRTEDALRSALLRRLDQ 515
++ H ++++ + ++ +R P G T + L+ LL L Q
Sbjct: 424 NEVMPHDSNVAITEEGVVHTFTLR-PQGGCTAEQLKDKLLASLSQ 467
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 151/239 (63%), Gaps = 5/239 (2%)
Query: 280 KKPRKDQGCTVKSSTGQSSYTVDSEHSDSDCPLPPPVNNISAVEKRTPKKRGRKPGLGRE 339
K D+G S+ +S+ DS+HSD + + + EK+ P+KRGRKP GRE
Sbjct: 354 KGSNNDEGMLSFSTVVRSAAN-DSDHSDLEASVVKEAIVVEPPEKK-PRKRGRKPANGRE 411
Query: 340 TPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLES-- 397
PLNHVEAERQRREKLN RFY+LRAVVPNVS+MDKASLL DA+SYI ELK K+ ES
Sbjct: 412 EPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDK 471
Query: 398 QLLQRESKKVKLEISDNHSTTTSVDQARPSSAGS-GGGFNLEVETKIMGSDAMIRVQSEN 456
+ +Q++ + E ++ + + + S+ S +E++ KI+G D MIRVQ
Sbjct: 472 EEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGK 531
Query: 457 VNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDGLRTEDALRSALLRRLDQ 515
+HP A+ M +L++LDL+++HAS+S VNDLM+Q V++ D L+ AL+ ++ +
Sbjct: 532 KDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKMGSQFFNHDQLKVALMTKVGE 590
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 116/194 (59%), Gaps = 19/194 (9%)
Query: 25 TLQQRLQFIVQSQPEWWAYAIFWQTISND------DNGQLFLAWGDGHYQGTKDASPRAR 78
TLQQRLQ +++S E W YAIFWQ IS+D DN + L WGDG+Y+G +D +
Sbjct: 51 TLQQRLQALIESAGENWTYAIFWQ-ISHDFDSSTGDN-TVILGWGDGYYKGEEDKEKKKN 108
Query: 79 MSMPAPAPGAALDNNMERKRAISSIRGIQQSFMGHEMDLSMMDGGDVTDTEWFYVMSLTR 138
+ A RKR I + + +G + + +VTDTEWF+++S+T+
Sbjct: 109 NTNTAEQE--------HRKRVIRELNSLISGGIGVSDE---SNDEEVTDTEWFFLVSMTQ 157
Query: 139 SFGAGVGIPGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGS 198
SF GVG+PG + + ++WL+GS L CERA + Q +G++T VCI T GV+ELGS
Sbjct: 158 SFVNGVGLPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNGVVELGS 217
Query: 199 SDLIRENWGLVHQV 212
S++I ++ L+H+V
Sbjct: 218 SEVISQSSDLMHKV 231
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 105/185 (56%), Gaps = 25/185 (13%)
Query: 327 PKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIR 386
P+KRGR+P GR LNHVEAERQRREKLN RFYALR+VVPN+S+MDKASLL DAVSYI
Sbjct: 417 PRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYIN 476
Query: 387 ELKVKIDDLESQLLQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGS 446
EL K+ +E++ + +L S N + D + + G
Sbjct: 477 ELHAKLKVMEAE-------RERLGYSSNPPISLDSD----------------INVQTSGE 513
Query: 447 DAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDGLRTEDALR 506
D +R+ +HPA+++ + + +++ ++++ D +L VV+ + T++ L
Sbjct: 514 DVTVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVKSEE--LTKEKLI 571
Query: 507 SALLR 511
SAL R
Sbjct: 572 SALSR 576
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 41 WAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDASPRARMSMPAPAPGAALDNNMERKRAI 100
W YAIFWQ IS G L L WGDG+ + K+ + + + M RKR +
Sbjct: 66 WNYAIFWQ-ISRSKAGDLVLCWGDGYCREPKEGEKSEIVRILSMGREEETHQTM-RKRVL 123
Query: 101 SSIRGIQQSFMGHEMDLSMMDGGDVTDTEWFYVMSLTRSFGAGVGIPGRAQSSGSLVWLT 160
+ + F G E + + VTDTE F + S+ SF G G PG+ +S VWL+
Sbjct: 124 QKLHDL---FGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGEGGPGKCFASAKPVWLS 180
Query: 161 GSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLIRENWGLVHQVKSLFGSDL 220
C R+ A+S GI+T V +PT GV+ELGS+ + E+ + ++SLF S L
Sbjct: 181 DVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLPESEDSILSIRSLFTSSL 240
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 108/212 (50%), Gaps = 24/212 (11%)
Query: 26 LQQRLQFIVQSQPEWWAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDASPRARMSMPAPA 85
LQ L+ VQS W Y++FWQ Q L WG+G+Y G + + R + PA
Sbjct: 20 LQGLLKTAVQSVD--WTYSVFWQFCPQ----QRVLVWGNGYYNG----AIKTRKT-TQPA 68
Query: 86 PGAALDNNMERKRAISSIRGIQQSFMGHEMD-----LSMMDGGDVTDTEWFYVMSLTRSF 140
A + +ER + +R + ++ + E + + D+T+TEWFY+M ++ SF
Sbjct: 69 EVTAEEAALERSQ---QLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSF 125
Query: 141 GAGVGIPGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSD 200
G+PG+A + VWL+G++E+ RA A+S I+T VCIP GV+ELG++
Sbjct: 126 PPPSGMPGKAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTK 185
Query: 201 LIRENWGLVHQVKSLFGSDLITKPLNPNPTPA 232
+RE+ V KS F T NP PA
Sbjct: 186 KVREDVEFVELTKSFFYDHCKT-----NPKPA 212
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 50/67 (74%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQ 401
L+HV AER+RREKLN +F LR++VP V++MDK S+L D ++Y+ L+ ++ +LE+ +
Sbjct: 362 LSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHE 421
Query: 402 RESKKVK 408
++ K+ +
Sbjct: 422 QQHKRTR 428
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 21 TPPPTLQQRLQFIVQSQPEWWAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDASPRARMS 80
T P L+++L V++ W+Y IFW ++S G L WGDG+Y G D R +
Sbjct: 8 TVPDNLKKQLAVSVRNIQ--WSYGIFW-SVSASQPG--VLEWGDGYYNG--DIKTRKTIQ 60
Query: 81 MPAPAPGAALDN-NMERKRAISSIRGIQ---------QSFMGHEMDLSMMDGGDVTDTEW 130
A +D +ER + + S + + + D+TDTEW
Sbjct: 61 ----AAEVKIDQLGLERSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEW 116
Query: 131 FYVMSLTRSFGAGVGIPGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTS 190
+Y++ ++ F G GIPG A S+G +WL + R+ A+S ++T VC P
Sbjct: 117 YYLVCMSFVFNIGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFL 176
Query: 191 CGVLELGSSDLIRENWGLVHQVKSLF 216
GVLE+G+++ I+E+ ++ VK+LF
Sbjct: 177 GGVLEIGTTEHIKEDMNVIQSVKTLF 202
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 27/167 (16%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQR 402
NH +E++RREKLN RF LR+++P++S++DK S+L D + Y+++L+ ++ +LES R
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES---CR 461
Query: 403 ESKKVKLEI---------------------SDNHSTTTSVDQARPSSAGSGG-GFNLEVE 440
ES + I S + +V + P+ G G NL +
Sbjct: 462 ESADTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRIS 521
Query: 441 TKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLM 487
+ +G++ +I ++ ++M + DL+L H S + L+
Sbjct: 522 S--LGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGLL 566
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 144/340 (42%), Gaps = 84/340 (24%)
Query: 41 WAYAIFWQTISNDDNGQLFLAWGDGHYQG---TKDASPRARMSMPAPAPGAALDNNMERK 97
W+YA+FW +IS+ G L W DG Y G T+ S ++ + + +
Sbjct: 37 WSYALFW-SISDTQPG--VLTWTDGFYNGEVKTRKISNSVELT----------SDQLVMQ 83
Query: 98 RAISSIRGIQQSFMGHEMD--------LSMMDGGDVTDTEWFYVMSLTRSFGAGVGIPGR 149
R+ +R + ++ + E D + D+ DTEW+YV+S+T +F G G+PGR
Sbjct: 84 RS-DQLRELYEALLSGEGDRRAAPARPAGSLSPEDLGDTEWYYVVSMTYAFRPGQGLPGR 142
Query: 150 AQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLIRENWGLV 209
+ +S VWL +H RA A+S I++ +CIP GVLELG++D + E LV
Sbjct: 143 SFASDEHVWLCNAHLAGSKAFPRALLAKSASIQSILCIPVMGGVLELGTTDTVPEAPDLV 202
Query: 210 HQVKSLFGSDLITKPLNPNPTP----------AAPPMHF----LDRNISFADIGIIAGVQ 255
+ + F +P P+ +P AA F LD N DI +
Sbjct: 203 SRATAAF-----WEPQCPSSSPSGRANETGEAAADDGTFAFEELDHNNGMDDIEAMTAAG 257
Query: 256 QEQEEE--------------------EEEEEELSRPEEEDQNKVKKPRKDQGCTVKSSTG 295
+EE +E EE S +E D + P +D
Sbjct: 258 GHGQEEELRLREAEALSDDASLEHITKEIEEFYSLCDEMDLQALPLPLED---------- 307
Query: 296 QSSYTVDSEHSDSDC----PLPPPVN----NISAVEKRTP 327
+TVD+ + + C P PPPV+ N++A R P
Sbjct: 308 --GWTVDASNFEVPCSSPQPAPPPVDRATANVAADASRAP 345
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 46/55 (83%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLES 397
NHV +ER+RREKLN F L++++P++ R++KAS+L++ ++Y++EL+ ++ +LES
Sbjct: 416 NHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELES 470
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 25/187 (13%)
Query: 41 WAYAIFWQTISNDDNGQLFLAWGDGHYQG---TKDASPRARMSMPAPAPGAALDNNMERK 97
W+YA+FW +IS+ G L W DG Y G T+ S ++ + + +
Sbjct: 37 WSYALFW-SISDTQPG--VLTWTDGFYNGEVKTRKISNSVELT----------SDQLVMQ 83
Query: 98 RAISSIRGIQQSFMGHEMD--------LSMMDGGDVTDTEWFYVMSLTRSFGAGVGIPGR 149
R+ +R + ++ + E D + D+ DTEW+YV+S+T +F G G+PGR
Sbjct: 84 RS-DQLRELYEALLSGEGDRRAAPARPAGSLSPEDLGDTEWYYVVSMTYAFRPGQGLPGR 142
Query: 150 AQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCGVLELGSSDLIRENWGLV 209
+ +S VWL +H RA A+S I++ +CIP GVLELG++D + E LV
Sbjct: 143 SFASDEHVWLCNAHLAGSKAFPRALLAKSASIQSILCIPVMGGVLELGTTDTVPEAPDLV 202
Query: 210 HQVKSLF 216
+ + F
Sbjct: 203 SRATAAF 209
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 46/55 (83%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLES 397
NHV +ER+RREKLN F L++++P++ R++KAS+L++ ++Y++EL+ ++ +LES
Sbjct: 418 NHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELES 472
>sp|Q8W2F1|BH012_ARATH Transcription factor MYC1 OS=Arabidopsis thaliana GN=BHLH12 PE=1
SV=1
Length = 526
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 26 LQQRLQFIVQSQPEWWAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDASPRARMSMPAPA 85
L+++L V+S W+YAIFW + S G L WG+G Y G D R +
Sbjct: 23 LRKQLALAVRSVQ--WSYAIFWSS-SLTQPG--VLEWGEGCYNG--DMKKRKKSYESHYK 75
Query: 86 PGAALDNNMERKRAISSIRGIQQSFMG-------------HEMDLSMMDGGDVTDTEWFY 132
G + RK +S + G + + H + M+ D++D EW+Y
Sbjct: 76 YGLQKSKEL-RKLYLSMLEGDSGTTVSTTHDNLNDDDDNCHSTSM-MLSPDDLSDEEWYY 133
Query: 133 VMSLTRSFGAGVGIPGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIPTSCG 192
++S++ F +PGRA ++G +WL + + R+ A+S I+T VC P G
Sbjct: 134 LVSMSYVFSPSQCLPGRASATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFPYLGG 193
Query: 193 VLELGSSDLIRENWGLVHQVKSLF 216
V+ELG ++LI E+ L+ +KS
Sbjct: 194 VIELGVTELISEDHNLLRNIKSCL 217
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 352 REKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLES-----QLLQRESKK 406
R K N +F LR +VP V+ +DK S+L++ + Y++EL+ ++++LES ++R+ K
Sbjct: 346 RRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVERQRKT 405
Query: 407 VK--------LEISDNHSTTTSV-DQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENV 457
+ E S N+ +T + D + + + + K+ ++ +I V+
Sbjct: 406 TENLNDSVLIEETSGNYDDSTKIDDNSGETEQVTVFRDKTHLRVKLKETEVVIEVRCSYR 465
Query: 458 NHPAAKLMSSLRDLDL 473
++ A +M +L +L +
Sbjct: 466 DYIVADIMETLSNLHM 481
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 21 TPPPTLQQRLQFIVQSQPEWWAYAIFWQTISNDDNGQLFLAWGDGHYQGTKDASPRARMS 80
T P L++ L V++ W+Y IFW ++S +G L WGDG+Y G + R +
Sbjct: 9 TVPENLKKHLAVSVRNIQ--WSYGIFW-SVSASQSG--VLEWGDGYYNG----DIKTRKT 59
Query: 81 MPAPAPGAALDNNMERKRAISSIRGIQQSF------------MGHEMDLSMMDGGDVTDT 128
+ A A + R +S + + + + D+ DT
Sbjct: 60 IQASEIKAD-QLGLRRSEQLSELYESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADT 118
Query: 129 EWFYVMSLTRSFGAGVGIPGRAQSSGSLVWLTGSHELQFYNCERAKEAQSHGIETFVCIP 188
EW+Y++ ++ F G G+PGR ++G +WL +H R+ A+S ++T VC P
Sbjct: 119 EWYYLVCMSFVFNIGEGMPGRTFANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFP 178
Query: 189 TSCGVLELGSSDLIRENWGLVHQVKSLF 216
GV+E+G+++ I E+ ++ VK+ F
Sbjct: 179 FLGGVVEIGTTEHITEDMNVIQCVKTSF 206
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 44/61 (72%)
Query: 337 GRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLE 396
R+ NH E++RREKLN RF LR ++P+++++DK S+L D + Y++EL+ ++ +LE
Sbjct: 435 ARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELE 494
Query: 397 S 397
S
Sbjct: 495 S 495
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 15/164 (9%)
Query: 325 RTPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSY 384
R KR + + +H+ AER+RREKL RF AL A+VP + +MDKAS+L DA+ +
Sbjct: 134 RKGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKH 193
Query: 385 IRELKVKIDDLESQLLQRE------SKKVKLEISDNHSTTTSVDQARPSSAGSG-GGFNL 437
I+ L+ ++ +LE Q +R KK KL + DN +Q+ SS G +L
Sbjct: 194 IKYLQERVGELEEQKKERRLESMVLVKKSKLILDDN-------NQSFSSSCEDGFSDLDL 246
Query: 438 -EVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASM 480
E+E + D +I++ E AK+M+ + L + + ++S+
Sbjct: 247 PEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSV 290
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 11/158 (6%)
Query: 341 PLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLL 400
P ++ AER+RR+KLN R Y LR+VVP +S+MD+AS+L DA+ Y++EL +I+DL ++L
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
Query: 401 QRESKKVKLEISDNHSTTTS--------VDQARPSSAGSGGGFNLEVETKIMGSDAMIRV 452
+ S H T + ++ PSS S G VE ++ A + +
Sbjct: 365 STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRA-VNI 423
Query: 453 QSENVNHPAAKL--MSSLRDLDLQLHHASMSCVNDLML 488
P L M +L +L L + A +SC N L
Sbjct: 424 HMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFAL 461
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 341 PLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLL 400
P ++ AER+RR+KLN R Y LR+VVP +S+MD+AS+L DA+ Y++EL +I+DL ++L
Sbjct: 265 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELE 324
Query: 401 QRESKKVKLEISDNHSTTTSV---DQARPSSA-GSGGGFNLEVETKIMGSDAMIRVQSEN 456
L T S ++ PSS+ S G VE ++ A + +
Sbjct: 325 STPPSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKA-VNIHMFC 383
Query: 457 VNHPAAKLMSSLRDLD---LQLHHASMSCVNDLML 488
P L+S++R LD L + A +SC N L
Sbjct: 384 GRRPGL-LLSTMRALDNLGLDVQQAVISCFNGFAL 417
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 8/158 (5%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
++ +ER RR+KLN R +ALR+VVPN+++MDKAS++ DA+SYI L+ + LE+++ + E
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELE 115
Query: 404 SK-KVKLEISDNHST-----TTSVDQARPSSAGSGGGFN-LEVETKIMGSDAM-IRVQSE 455
S K L S + TS + S S LE++ MG M + V
Sbjct: 116 STPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCN 175
Query: 456 NVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVV 493
KL L+L++ ++++ + ++ + +
Sbjct: 176 KRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFI 213
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 27/210 (12%)
Query: 318 NISAVEKRTPKKRGRKPGLGRETP---LNHVEAERQRREKLNHRFYALRAVVPN--VSRM 372
N++ E ++ +KR R E + H+ ER RR+++N LR+++P V R
Sbjct: 170 NVTKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRG 229
Query: 373 DKASLLSDAVSYIRELKVKIDDLESQ----LLQRESKKVKLEISDNHSTTTSV-DQARP- 426
D+AS++ A+ ++REL+ + LESQ +L + + + + S T+V +QA+P
Sbjct: 230 DQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPL 289
Query: 427 ------SSAGSGGGFNLE----------VETKIMGSDAMIRVQSENVNHPAAKLMSSLRD 470
+ GGG E VE K++G DAMI++ S K +++L D
Sbjct: 290 IITGNVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALED 349
Query: 471 LDLQLHHASMSCVNDLMLQDIVVRVPDGLR 500
L L + H +++ + +L V++ R
Sbjct: 350 LHLSILHTNITTMEQTVLYSFNVKITSETR 379
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 51/67 (76%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
+V +ER RR+KLN R +ALR+VVPN+S++DKAS++ D++ Y++EL + LE+++ + E
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
Query: 404 SKKVKLE 410
S+ LE
Sbjct: 115 SRSTLLE 121
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 30/170 (17%)
Query: 323 EKRTPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAV 382
+++T R P L +E HV AER+RREKL+ +F AL A++P + + DK ++L DA+
Sbjct: 103 KRKTCSHGTRSPVLAKE----HVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAI 158
Query: 383 SYIRELKVKIDDL----------ESQLLQRESKKVKLEISDNHSTTTSV----DQARPSS 428
S +++L+ ++ L ES +L ++S KV + N S + SV DQA P
Sbjct: 159 SRMKQLQEQLRTLKEEKEATRQMESMILVKKS-KVFFDEEPNLSCSPSVHIEFDQALP-- 215
Query: 429 AGSGGGFNLEVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHA 478
E+E KI +D +IR+ E +++++ + L++ ++
Sbjct: 216 ---------EIEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENS 256
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 45/53 (84%)
Query: 347 AERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
AER+RR+KLN R YALR++VP ++++D+AS+L DA++Y++EL+ + +L+ +L
Sbjct: 318 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDEL 370
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 14/147 (9%)
Query: 343 NHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKI---------D 393
+H+ AER+RREKL RF AL A++P + +MDKAS+L DA+ +I+ L+ +
Sbjct: 126 DHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEK 185
Query: 394 DLESQLLQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQ 453
+ES +L KK L + +NH ++S ++ S E+E ++ G D +I++
Sbjct: 186 TMESVVL---VKKSSLVLDENHQPSSSSSSDGNRNSSSSNL--PEIEVRVSGKDVLIKIL 240
Query: 454 SENVNHPAAKLMSSLRDLDLQLHHASM 480
E K+M + L L + ++++
Sbjct: 241 CEKQKGNVIKIMGEIEKLGLSITNSNV 267
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 35/200 (17%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVP--NVSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
+ H+ ER RR+++N LR+++P R D+AS++ A++Y++EL+ + +E
Sbjct: 125 MTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSME--- 181
Query: 400 LQRESKKVKLEISD-----NHSTTTSVDQA--------------RPSSAGSGGGFNLEVE 440
VK D + + TTS + RP+SA + G E+E
Sbjct: 182 -----PPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEGM-AEIE 235
Query: 441 TKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDG-- 498
++ S A +++ ++ KL+SS++ L L L H +++ +D +L I V+V +G
Sbjct: 236 VTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEEGSQ 295
Query: 499 LRTEDALRSA---LLRRLDQ 515
L T + + +A +LRR+++
Sbjct: 296 LNTVEDIAAAVNQILRRIEE 315
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 49/203 (24%)
Query: 326 TPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYI 385
T KKR K G+ P ++ AER+RR++LN R LR++VP +++MD+ S+L DA+ Y+
Sbjct: 136 TNKKRSNKKLEGQ--PSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYM 193
Query: 386 RELKVKIDDLE------------SQLLQRES---KKVKLEISDNHSTTTSVDQARPSSAG 430
+EL KI+ L+ S L+ ES +K E+ D T +D P+ G
Sbjct: 194 KELLDKINKLQEDEQELGSNSHLSTLITNESMVRNSLKFEV-DQREVNTHIDICCPTKPG 252
Query: 431 SGGGFNLEVETKIMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQD 490
L V T +S+L L L++ +SC +D LQ
Sbjct: 253 ------LVVST-----------------------VSTLETLGLEIEQCVISCFSDFSLQA 283
Query: 491 IVVRVPDG--LRTEDALRSALLR 511
V + + T +A + AL+R
Sbjct: 284 SCFEVGEQRYMVTSEATKQALIR 306
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 19/173 (10%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVP--NVSRMDKASLLSDAVSYIRELKVKIDDLESQ- 398
++H+ ER RR ++N +LR++ P + R D+AS++ + +I+EL+ + LES+
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 399 ---LLQRES---KKVKLEISDNHSTTTSVDQARPSSAGSGGGF----------NLEVETK 442
L R S +E S + TT V +R + + F + VE K
Sbjct: 61 RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAK 120
Query: 443 IMGSDAMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRV 495
I GS+ ++RV S + K++S L L Q+ H ++S + + +L VV++
Sbjct: 121 ISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKI 173
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Query: 332 RKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVK 391
R+P L +E HV AER+RR+KLN R AL A++P + + DKA++L DA+ ++++L+ +
Sbjct: 125 REPHLLKE----HVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQER 180
Query: 392 IDDLESQ 398
+ LE +
Sbjct: 181 VKKLEEE 187
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 44/58 (75%)
Query: 347 AERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRES 404
+ER+RR ++ + YALR++VPN+++MDKAS++ DAV Y++EL+ + L+S + E+
Sbjct: 135 SERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEA 192
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 24/193 (12%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPN--VSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
+ H+ ER RR+++N LR+++P+ R D+AS++ A++Y++EL+ + +E +
Sbjct: 115 MTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKR 174
Query: 400 LQRESKKVKLEISDNHSTTTSV------------DQARPSSAGSGGGFNLEVETKIMGSD 447
+ K D ST++ V S E+E + S
Sbjct: 175 TRTHDPK-----GDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSPAEIEVTVAESH 229
Query: 448 AMIRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDG--LRTEDAL 505
A I++ ++ KL++SL+ L L L H +++ +++ +L I VRV +G L T D +
Sbjct: 230 ANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDI 289
Query: 506 RSAL---LRRLDQ 515
+AL +RR+ +
Sbjct: 290 ATALNQTIRRIQE 302
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDL 395
++EAER+RREKL+ R ALR+ VP V+ M KAS++ DA++YI EL+ + +L
Sbjct: 33 NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNL 84
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVP--NVSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
+ H+ ER RR ++N +LR+++P + R D+AS++ A+ +I+EL+ + LE++
Sbjct: 115 MTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEAEK 174
Query: 400 LQRESKKV----------KLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAM 449
+ + + L +++ ++ S +A GGG EVE ++ +
Sbjct: 175 RKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTEVEATVIQNHVS 234
Query: 450 IRVQSENVNHPAAKLMSSLRDLDLQLHHASMSCVNDLMLQDIVVRVPDG--LRTEDALRS 507
++V+ + K + S+ +L L + H ++S D ++ +++ DG L + D + +
Sbjct: 235 LKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMEDGCKLGSADEIAT 294
Query: 508 ALLRRLDQ 515
A+ + +Q
Sbjct: 295 AVHQIFEQ 302
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDL 395
H +AER+RR ++N +F LR ++PN+ + DKAS+L + V Y ELK + D+
Sbjct: 96 HSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQDI 147
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 37/49 (75%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKI 392
H ++ER+RR+K+N R L+ +VPN S+ DKAS+L + + Y+++L+ ++
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 347 AERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQRE 403
A R+RR +++ RF LR++VP S+MD S+L A+ Y++ LK ++ ++ L+Q E
Sbjct: 48 AARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQAALVQHE 104
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 326 TPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYI 385
T KK+ +K P ++ AER+RR++LN R LR++VP +S+MD+ S+L DA+ Y+
Sbjct: 164 TNKKKSKKL---EGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYM 220
Query: 386 RELKVKIDDLESQ 398
+EL KI+ L+ +
Sbjct: 221 KELLDKINKLQDE 233
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 39/52 (75%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDL 395
H +E++RR K+N + AL+ ++PN ++ DKAS+L +A+ Y+++L++++ L
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 329 KRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIREL 388
++GR R +P ER+RR N RF+ L+ ++PN +++D+AS++ +A+ YI+EL
Sbjct: 238 RKGRGSRKSRTSP-----TERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKEL 292
Query: 389 KVKIDDLE 396
I++ +
Sbjct: 293 LRTIEEFK 300
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 39/49 (79%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKI 392
H +ER+RR+++N + AL+ ++PN +++DKAS+L +A+ Y++ L++++
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQV 396
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 21/139 (15%)
Query: 273 EEDQNKVKKPR--KDQGCTVKSSTGQSSYTVDSEHSDSDC-----------PLPPPVN-N 318
+E+Q+K KKPR K++G + S S+ D+ D++ PVN
Sbjct: 202 DENQSKSKKPRTEKERGGSSNISFQHSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFG 261
Query: 319 ISAVEKRTPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLL 378
+ VEK PK++ K +T A RQRRE+++ + L+ +VP ++MD AS+L
Sbjct: 262 LEIVEK--PKRKNVKISTDPQTV-----AARQRRERISEKIRVLQTLVPGGTKMDTASML 314
Query: 379 SDAVSYIRELKVKIDDLES 397
+A +Y++ L+ ++ LE+
Sbjct: 315 DEAANYLKFLRAQVKALEN 333
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 322 VEKRTPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDA 381
V ++ P+ R R+ G+ T H AER RRE++ R +L+ +VPN ++ DKAS+L +
Sbjct: 92 VVRQKPRVRARR---GQATD-PHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEI 147
Query: 382 VSYIRELKVKIDDL 395
+ Y+R L++++ L
Sbjct: 148 IEYVRFLQLQVKVL 161
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 328 KKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRE 387
+++GR G + P ER+RR LN R+ AL+ ++P+ S+ D+AS+L D + YI E
Sbjct: 204 RRKGR--GKRKNKPFT---TERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINE 258
Query: 388 LKVKIDDLESQLLQRE 403
L+ ++ +L+ L++R+
Sbjct: 259 LRRRVSELK-YLVERK 273
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 7/109 (6%)
Query: 320 SAVEKRTPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLS 379
+A + PK R R+ G+ T H AER RRE++ R +L+ +VPN ++ DKAS+L
Sbjct: 121 TAQPQTKPKVRARR---GQATD-PHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLD 176
Query: 380 DAVSYIRELKVKIDDLESQLL---QRESKKVKLEISDNHSTTTSVDQAR 425
+ + Y++ L++++ L L S ++ + +H T+S +A+
Sbjct: 177 EIIDYVKFLQLQVKVLSMSRLGGAASASSQISEDAGGSHENTSSSGEAK 225
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVP--NVSRMDKASLLSDAVSYIRELKVKIDDLESQ- 398
+NH+ ER RR ++N +LRA++P + R D+AS++ A++Y++ L+ I LESQ
Sbjct: 178 INHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQK 237
Query: 399 LLQRESKKVKLEISDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQSENVN 458
Q++S +E + NH + S + + ++E ++ + ++VQ E
Sbjct: 238 RTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCI--PKIEATVIQNHVSLKVQCEKKQ 295
Query: 459 HPAAKLMSSLRDLDLQLHHASMS 481
K + SL L L + H +++
Sbjct: 296 GQLLKGIISLEKLKLTVLHLNIT 318
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 330 RGRKPGLGRETPLN-HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIREL 388
R RKP R+ H ER+RR++ N + AL+ ++PN + DKASLL +A+ Y+R L
Sbjct: 219 RTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTL 278
Query: 389 KVKI 392
++++
Sbjct: 279 QLQV 282
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 37/49 (75%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKI 392
H +ER+RR+++N R AL+ ++P ++ DKAS+L +A+ Y++ L+++I
Sbjct: 289 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQI 337
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 8/84 (9%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDLESQLLQ-- 401
H AE++RR+++N ALR +VPN ++DKA+LL+ + ++ELK K ES + Q
Sbjct: 67 HRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKA--AESPIFQDL 124
Query: 402 -RESKKVKLE---ISDNHSTTTSV 421
E+ +V ++ ISD S T ++
Sbjct: 125 PTEADEVTVQPETISDFESNTNTI 148
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 342 LNHVEAERQRREKLNHRFYALRAVVPN--VSRMDKASLLSDAVSYIRELKVKIDDLESQL 399
+ H+ ER RR ++N +LR+++P+ + R D+AS++ A+ +++ L+ ++ LE+Q
Sbjct: 193 MTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQK 252
Query: 400 LQRESKKVKLEI-SDNHSTTTSVDQARPSSAGSGGGFNLEVETKIMGSDAMIRVQ 453
++S K +I DN S ++ R S+ L++E ++ S +++Q
Sbjct: 253 RSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSS-KLKIEATVIESHVNLKIQ 306
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 40/52 (76%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDL 395
H +E++RR ++N + AL++++PN ++ DKAS+L +A+ Y+++L++++ L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDL 395
H AER RRE++ R AL+ +VPN ++ DKAS+L + + Y++ L++++ L
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 344 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYIRELKVKIDDL 395
H AER+RREK+N R L+ ++P ++ K S+L D + Y++ L+++I+
Sbjct: 155 HNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQINQF 206
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 193,744,991
Number of Sequences: 539616
Number of extensions: 8454548
Number of successful extensions: 68996
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 527
Number of HSP's that attempted gapping in prelim test: 59230
Number of HSP's gapped (non-prelim): 5951
length of query: 515
length of database: 191,569,459
effective HSP length: 122
effective length of query: 393
effective length of database: 125,736,307
effective search space: 49414368651
effective search space used: 49414368651
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)