Query 046181
Match_columns 234
No_of_seqs 181 out of 701
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 09:28:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046181.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046181hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG3866 PelB Pectate lyase [Ca 100.0 8.3E-38 1.8E-42 284.0 14.2 177 55-234 47-341 (345)
2 PF00544 Pec_lyase_C: Pectate 100.0 1.9E-32 4.2E-37 236.5 7.3 93 111-204 73-200 (200)
3 smart00656 Amb_all Amb_all dom 100.0 1.5E-29 3.2E-34 217.2 15.0 97 111-208 58-190 (190)
4 PLN02218 polygalacturonase ADP 97.1 0.0064 1.4E-07 58.9 12.3 102 111-217 240-355 (431)
5 COG3866 PelB Pectate lyase [Ca 96.8 0.0057 1.2E-07 57.1 8.5 62 113-174 116-196 (345)
6 PF13229 Beta_helix: Right han 96.8 0.0074 1.6E-07 47.3 8.0 62 110-173 20-85 (158)
7 PLN02793 Probable polygalactur 96.7 0.021 4.5E-07 55.5 11.8 97 111-212 225-335 (443)
8 PLN02188 polygalacturonase/gly 96.7 0.018 3.9E-07 55.3 11.2 99 111-212 203-315 (404)
9 PLN02155 polygalacturonase 96.7 0.013 2.9E-07 56.1 10.1 103 111-217 193-309 (394)
10 PLN03003 Probable polygalactur 96.4 0.038 8.2E-07 54.1 11.6 97 111-212 186-296 (456)
11 PLN02218 polygalacturonase ADP 96.3 0.039 8.5E-07 53.5 10.7 94 106-209 208-318 (431)
12 PF13229 Beta_helix: Right han 96.2 0.028 6E-07 44.0 7.9 94 114-209 1-114 (158)
13 TIGR03805 beta_helix_1 paralle 96.0 0.073 1.6E-06 49.3 10.6 97 112-210 106-245 (314)
14 TIGR03805 beta_helix_1 paralle 95.8 0.08 1.7E-06 49.0 9.9 66 106-173 70-148 (314)
15 PF00295 Glyco_hydro_28: Glyco 95.7 0.059 1.3E-06 49.9 8.7 65 111-177 140-216 (326)
16 smart00656 Amb_all Amb_all dom 95.5 0.15 3.2E-06 43.9 10.1 88 113-208 31-145 (190)
17 PLN02793 Probable polygalactur 95.4 0.16 3.5E-06 49.5 10.8 94 106-209 193-303 (443)
18 PF12708 Pectate_lyase_3: Pect 95.1 0.15 3.3E-06 42.6 8.5 104 97-208 96-221 (225)
19 PF00295 Glyco_hydro_28: Glyco 94.6 0.28 6.1E-06 45.4 9.8 90 108-207 110-216 (326)
20 PF00544 Pec_lyase_C: Pectate 94.5 0.18 3.9E-06 43.7 7.8 91 80-174 1-126 (200)
21 PLN03010 polygalacturonase 94.5 1.2 2.5E-05 43.2 14.0 113 98-217 194-320 (409)
22 PLN02188 polygalacturonase/gly 94.5 0.46 9.9E-06 45.8 11.2 101 98-209 164-281 (404)
23 PLN03003 Probable polygalactur 94.5 0.27 5.8E-06 48.3 9.7 93 107-209 155-264 (456)
24 PF05048 NosD: Periplasmic cop 94.0 0.33 7.1E-06 42.0 8.4 83 114-206 80-167 (236)
25 PLN02155 polygalacturonase 93.8 0.66 1.4E-05 44.6 10.7 92 108-209 163-271 (394)
26 PF14592 Chondroitinas_B: Chon 93.6 0.11 2.4E-06 50.5 5.0 85 121-209 98-213 (425)
27 PLN03010 polygalacturonase 93.4 0.71 1.5E-05 44.6 10.3 91 109-209 176-283 (409)
28 PF14592 Chondroitinas_B: Chon 93.4 0.11 2.3E-06 50.6 4.7 61 121-182 130-216 (425)
29 PF05048 NosD: Periplasmic cop 89.9 1.1 2.3E-05 38.8 6.7 84 111-205 33-120 (236)
30 COG5434 PGU1 Endopygalactoruna 87.9 3.2 6.8E-05 41.8 9.1 63 112-176 286-368 (542)
31 PF08480 Disaggr_assoc: Disagg 85.4 1.9 4.1E-05 37.9 5.4 44 162-209 32-78 (198)
32 TIGR03808 RR_plus_rpt_1 twin-a 85.4 15 0.00033 36.3 12.0 83 93-179 115-203 (455)
33 PF08480 Disaggr_assoc: Disagg 85.2 8.8 0.00019 33.9 9.3 90 120-210 32-146 (198)
34 TIGR03808 RR_plus_rpt_1 twin-a 83.0 4.8 0.0001 39.7 7.5 45 112-158 238-283 (455)
35 PF12708 Pectate_lyase_3: Pect 75.0 8.4 0.00018 32.0 5.8 61 115-179 156-222 (225)
36 TIGR03804 para_beta_helix para 68.1 13 0.00028 24.0 4.3 41 115-157 1-41 (44)
37 PF01696 Adeno_E1B_55K: Adenov 61.0 1.4E+02 0.003 29.1 11.4 61 113-177 136-200 (386)
38 KOG0322 G-protein beta subunit 47.2 20 0.00043 33.6 3.2 65 47-119 212-278 (323)
39 smart00710 PbH1 Parallel beta- 32.8 58 0.0013 17.3 2.6 20 122-141 2-21 (26)
40 PF12541 DUF3737: Protein of u 31.5 57 0.0012 30.3 3.6 58 119-182 16-74 (277)
41 PF07822 Toxin_13: Neurotoxin 31.3 18 0.00039 25.2 0.3 20 27-46 19-38 (55)
42 PF02551 Acyl_CoA_thio: Acyl-C 28.8 95 0.0021 25.8 4.2 42 162-205 72-116 (131)
43 COG5434 PGU1 Endopygalactoruna 28.1 90 0.002 31.6 4.6 63 111-173 307-395 (542)
44 COG3420 NosD Nitrous oxidase a 27.7 2E+02 0.0044 28.0 6.6 44 112-157 149-192 (408)
45 PRK03174 sspH acid-soluble spo 21.7 49 0.0011 23.9 1.1 18 114-131 14-32 (59)
46 PRK01625 sspH acid-soluble spo 20.7 53 0.0011 23.7 1.1 18 114-131 14-32 (59)
47 PF03211 Pectate_lyase: Pectat 20.5 69 0.0015 28.7 2.0 51 109-160 92-143 (215)
48 PF12541 DUF3737: Protein of u 20.0 2.9E+02 0.0064 25.7 6.0 30 144-173 173-203 (277)
No 1
>COG3866 PelB Pectate lyase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.3e-38 Score=284.03 Aligned_cols=177 Identities=23% Similarity=0.308 Sum_probs=142.7
Q ss_pred CCCCCCCCcEEEEEECCCCCC---CCCCCCc--eEEEeEEecCCcc----------------ee--------EEEEEc--
Q 046181 55 KITDNVGKDIVHYKVTDPGDD---TINPKLG--TLRYGATLIPQKQ----------------CD--------HLWAIH-- 103 (234)
Q Consensus 55 ~tTGG~GG~v~~~~VTtl~D~---~~~~~pg--tlr~~~~i~~~~~----------------~i--------~gi~I~-- 103 (234)
+||||.||++ ++|.|.+|+ +.+.+|. +|.+.|+|....| ++ .|+.|+
T Consensus 47 GTtGG~~g~~--v~v~ta~~l~~~~sa~~~~t~ii~v~Gti~~s~ps~~k~~iki~sNkTivG~g~~a~~~g~gl~i~~a 124 (345)
T COG3866 47 GTTGGSGGDI--VTVRTANDLETYLSASGKYTVIIVVKGTITASTPSDKKITIKIGSNKTIVGSGADATLVGGGLKIRDA 124 (345)
T ss_pred CcccCCCCcE--EEEeeHHHHHHHhhccCceEEEEEEcceEeccCCCCceEEEeeccccEEEeeccccEEEeceEEEEeC
Confidence 9999999999 999999999 6667777 8889998854411 11 355555
Q ss_pred CCcccc-----C---CC--CCeEEe-eCCCcEEEEceeecc--------CCCCeeEeeeCCccEEEeCceecCCccc---
Q 046181 104 PPLLSE-----G---PK--PYAIRL-VTTSKVWIDHNIRYE--------CQDGLIDVRRGSTDVTISNNWFRNQEKR--- 161 (234)
Q Consensus 104 ~~g~i~-----~---~~--~DaI~i-~~s~nVWIDHcsfs~--------~~Dglldi~~~s~~VTIS~n~f~~h~k~--- 161 (234)
+|+++| . .+ .|+|+| .+++|||||||+|+. ..||++|+++++++||||||+|++|+|.
T Consensus 125 ~NVIirNltf~~~~~~d~~~D~Isi~~~~~nIWIDH~tf~~~s~~~~~~h~DGl~Dik~~AnyITiS~n~fhdh~Kssl~ 204 (345)
T COG3866 125 GNVIIRNLTFEGFYQGDPNYDAISIYDDGHNIWIDHNTFSGGSYNASGSHGDGLVDIKKDANYITISYNKFHDHDKSSLL 204 (345)
T ss_pred CcEEEEeeEEEeeccCCCCCCcEEeccCCeEEEEEeeEeccccccccccCCCccEEeccCCcEEEEEeeeeecCCeeeee
Confidence 444443 1 22 499999 579999999999999 6899999999999999999999999998
Q ss_pred ----------CceeEEEEceEECCCCCCCCC-----------CCC----ceeeecCCC--CeEEEEceeEeCCCCCCC--
Q 046181 162 ----------QNMKVIVVNNHFGPNRNQRLP-----------GYT----QYAIGGSMN--PSIKSQANLLIAPKVGNK-- 212 (234)
Q Consensus 162 ----------~~~~vT~hhN~fa~~~~~R~P-----------~~~----~y~ig~~~~--a~vlvE~NyF~~~~~p~~-- 212 (234)
++.+||+||||| .|+.||+| ||. .|+++.++| |++++|+|||++...|..
T Consensus 205 G~sD~~~~~~~~~kvT~hhNyF-kn~~qR~PriRfG~vHvyNNYy~~~~~~g~a~~iG~~AkiyvE~NyF~~~~~~~~f~ 283 (345)
T COG3866 205 GSSDSSNYDDGKYKVTIHHNYF-KNLYQRGPRIRFGMVHVYNNYYEGNPKFGVAITIGTSAKIYVENNYFENGSEGLGFL 283 (345)
T ss_pred ccCCcccccCCceeEEEecccc-ccccccCCceEeeEEEEeccccccCcccceEEeeccceEEEEecceeccCCCCceee
Confidence 667899999999 89999999 221 256667777 999999999999544322
Q ss_pred -----------------------------------cccccccccccchhhh-cccCCC
Q 046181 213 -----------------------------------KEQTFQVADAKSARSL-TSESSV 234 (234)
Q Consensus 213 -----------------------------------~~~~~~~~p~~~v~~~-~~~~g~ 234 (234)
.-++|+++|...||+. |++||+
T Consensus 284 dt~~~~GY~~~d~gsy~~~s~~~~~~~~G~~w~ps~~Y~Ytvd~~~dVks~Vt~yAGa 341 (345)
T COG3866 284 DTKGTSGYANQDSGSYLNSSKSMSVRAGGVTWNPSSYYSYTVDPPEDVKSFVTNYAGA 341 (345)
T ss_pred ecCCccceEEeccCceecccCCcccccCCccCCCCCCcccccCChHHhhhhhhccccc
Confidence 1146899999999999 999984
No 2
>PF00544 Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pectate lyase 4.2.2.2 from EC is an enzyme involved in the maceration and soft rotting of plant tissue. Pectate lyase is responsible for the eliminative cleavage of pectate, yielding oligosaccharides with 4-deoxy-alpha-D-mann-4-enuronosyl groups at their non-reducing ends. The protein is maximally expressed late in pollen development. It has been suggested that the pollen expression of pectate lyase genes might relate to a requirement for pectin degradation during pollen tube growth []. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail [,]. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Amb a 1, Amb a 2, Amb a 3, Cha o 1, Cup a 1, Cry j 1, Jun a 1. Two of the major allergens in the pollen of short ragweed (Ambrosia artemisiifolia) are Amb aI and Amb aII. The primary structure of Amb aII has been deduced and has been shown to share ~65% sequence identity with the Amb alpha I multigene family of allergens []. Members of the Amb aI/aII family include Nicotiana tabacum (Common tobacco) pectate lyase, which is similar to the deduced amino acid sequences of two pollen-specific pectate lyase genes identified in Solanum lycopersicum (Tomato) (Lycopersicon esculentum) []; Cry jI, a major allergenic glycoprotein of Cryptomeria japonica (Japanese cedar) - the most common pollen allergen in Japan []; and P56 and P59, which share sequence similarity with pectate lyases of plant pathogenic bacteria [].; PDB: 1O8M_A 1O8K_A 1O8E_A 1O8H_A 2PEC_A 1PLU_A 1O8I_A 1O8J_A 1O8D_A 1O8F_A ....
Probab=99.97 E-value=1.9e-32 Score=236.49 Aligned_cols=93 Identities=39% Similarity=0.611 Sum_probs=80.2
Q ss_pred CCCCeEEeeCCCcEEEEceeeccC--------CCCeeEeeeCCccEEEeCceecCCccc------------CceeEEEEc
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYEC--------QDGLIDVRRGSTDVTISNNWFRNQEKR------------QNMKVIVVN 170 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~--------~Dglldi~~~s~~VTIS~n~f~~h~k~------------~~~~vT~hh 170 (234)
.++|+|+|++++|||||||+|+|+ .||++|++.++++||||||+|++|+|+ ..+++||||
T Consensus 73 ~~~Dai~i~~~~nVWIDH~sfs~~~~~~~~~~~Dg~idi~~~s~~vTiS~n~f~~~~k~~l~G~~d~~~~~~~~~vT~hh 152 (200)
T PF00544_consen 73 SDGDAISIDNSSNVWIDHCSFSWGNFECNSDSSDGLIDIKKGSDNVTISNNIFDNHNKTMLIGSSDSNSTDRGLRVTFHH 152 (200)
T ss_dssp CS--SEEEESTEEEEEES-EEEETTS-GGGSSSSSSEEEESSTEEEEEES-EEEEEEETCEESSCTTCGGGTTEEEEEES
T ss_pred cCCCeEEEEecccEEEeccEEeccccccccccCCceEEEEeCCceEEEEchhccccccccccCCCCCccccCCceEEEEe
Confidence 578999999999999999999999 999999999999999999999999887 337999999
Q ss_pred eEECCCCCCCCC---------------CCCceeeecCCCCeEEEEceeE
Q 046181 171 NHFGPNRNQRLP---------------GYTQYAIGGSMNPSIKSQANLL 204 (234)
Q Consensus 171 N~fa~~~~~R~P---------------~~~~y~ig~~~~a~vlvE~NyF 204 (234)
||| .++.+|+| ++..|+++.++++++++|+|||
T Consensus 153 N~f-~~~~~R~P~~r~G~~Hv~NN~~~~~~~y~i~~~~~a~v~~E~N~F 200 (200)
T PF00544_consen 153 NYF-ANTNSRNPRVRFGYVHVYNNYYYNWSGYAIGARSGAQVLVENNYF 200 (200)
T ss_dssp -EE-EEEEE-TTEECSCEEEEES-EEEEECSESEEEETTEEEEEES-EE
T ss_pred EEE-CchhhCCCcccccEEEEEEeeeECCCCEEEEccCCeEEEEECcCC
Confidence 999 79999999 3467899999999999999999
No 3
>smart00656 Amb_all Amb_all domain.
Probab=99.97 E-value=1.5e-29 Score=217.20 Aligned_cols=97 Identities=48% Similarity=0.729 Sum_probs=89.4
Q ss_pred CCCCeEEeeCCCcEEEEceeeccC---------CCCeeEeeeCCccEEEeCceecCCccc---C---------ceeEEEE
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYEC---------QDGLIDVRRGSTDVTISNNWFRNQEKR---Q---------NMKVIVV 169 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~---------~Dglldi~~~s~~VTIS~n~f~~h~k~---~---------~~~vT~h 169 (234)
.++|+|++++++|||||||+|+|+ .|+++|++.++++||||||+|++|+|+ + .++||||
T Consensus 58 ~~~D~i~~~~~~~VwIDHct~s~~~~~~~~~~~~D~~~di~~~s~~vTvs~~~f~~h~~~~liG~~d~~~~~~~~~vT~h 137 (190)
T smart00656 58 SDGDAISIDGSSNVWIDHVSLSGCTVTGFGDDTYDGLIDIKNGSTYVTISNNYFHNHWKVMLLGHSDSDTDDGKMRVTIA 137 (190)
T ss_pred CCCCEEEEeCCCeEEEEccEeEcceeccCCCCCCCccEEECcccccEEEECceEecCCEEEEEccCCCccccccceEEEE
Confidence 578999999999999999999998 899999999999999999999999998 1 2489999
Q ss_pred ceEECCCCCCCCC---------------CCCceeeecCCCCeEEEEceeEeCCC
Q 046181 170 NNHFGPNRNQRLP---------------GYTQYAIGGSMNPSIKSQANLLIAPK 208 (234)
Q Consensus 170 hN~fa~~~~~R~P---------------~~~~y~ig~~~~a~vlvE~NyF~~~~ 208 (234)
|||| .++.+|+| +|..|+++.++++++++|+|||++..
T Consensus 138 ~N~~-~~~~~R~P~~r~g~~hv~NN~~~n~~~~~~~~~~~~~v~~E~N~F~~~~ 190 (190)
T smart00656 138 HNYF-GNLRQRAPRVRFGYVHVYNNYYTGWTSYAIGGRMGATILSEGNYFEAPI 190 (190)
T ss_pred CcEE-cCcccCCCcccCCEEEEEeeEEeCcccEeEecCCCcEEEEECeEEECCC
Confidence 9999 69999999 56679999999999999999999863
No 4
>PLN02218 polygalacturonase ADPG
Probab=97.14 E-value=0.0064 Score=58.87 Aligned_cols=102 Identities=18% Similarity=0.184 Sum_probs=70.7
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC-Cccc-----------CceeEEEEceEECCCCC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN-QEKR-----------QNMKVIVVNNHFGPNRN 178 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~-h~k~-----------~~~~vT~hhN~fa~~~~ 178 (234)
+..|||.+.+++||.|.+|.++.+ |..|.++.++++|+|++|.+.. |--. .-.+|++.++.| .++.
T Consensus 240 pNTDGIdi~ss~nV~I~n~~I~tG-DDcIaIksgs~nI~I~n~~c~~GHGisIGS~g~~~~~~~V~nV~v~n~~~-~~t~ 317 (431)
T PLN02218 240 PNTDGIHITNTQNIRVSNSIIGTG-DDCISIESGSQNVQINDITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKL-SGTD 317 (431)
T ss_pred CCCCcEeecccceEEEEccEEecC-CceEEecCCCceEEEEeEEEECCCCEEECcCCCCCCCceEEEEEEEccEE-ecCC
Confidence 468999999999999999999987 8889999999999999999853 3211 124788999988 5543
Q ss_pred CCCC--CCCceeeecCCCCeEEEEceeEeCCCCCCCccccc
Q 046181 179 QRLP--GYTQYAIGGSMNPSIKSQANLLIAPKVGNKKEQTF 217 (234)
Q Consensus 179 ~R~P--~~~~y~ig~~~~a~vlvE~NyF~~~~~p~~~~~~~ 217 (234)
.-.- .|.. +++.-..|.+|+...+++..|..-.+.|
T Consensus 318 nGvRIKT~~G---g~G~v~nI~f~ni~m~~V~~pI~Idq~Y 355 (431)
T PLN02218 318 NGVRIKTYQG---GSGTASNIIFQNIQMENVKNPIIIDQDY 355 (431)
T ss_pred cceEEeecCC---CCeEEEEEEEEeEEEEcccccEEEEeec
Confidence 2000 1210 1122245777888888777765433334
No 5
>COG3866 PelB Pectate lyase [Carbohydrate transport and metabolism]
Probab=96.83 E-value=0.0057 Score=57.12 Aligned_cols=62 Identities=13% Similarity=0.125 Sum_probs=52.6
Q ss_pred CCeEEeeCCCcEEEEceeeccCC-----CCeeEeeeCCccEEEeCceecC--------Cccc------CceeEEEEceEE
Q 046181 113 PYAIRLVTTSKVWIDHNIRYECQ-----DGLIDVRRGSTDVTISNNWFRN--------QEKR------QNMKVIVVNNHF 173 (234)
Q Consensus 113 ~DaI~i~~s~nVWIDHcsfs~~~-----Dglldi~~~s~~VTIS~n~f~~--------h~k~------~~~~vT~hhN~f 173 (234)
+-++.|+.+.||+|-..+|...+ +..|.+..++.+|.|-+|-|.+ |.++ ....||+..|+|
T Consensus 116 g~gl~i~~a~NVIirNltf~~~~~~d~~~D~Isi~~~~~nIWIDH~tf~~~s~~~~~~h~DGl~Dik~~AnyITiS~n~f 195 (345)
T COG3866 116 GGGLKIRDAGNVIIRNLTFEGFYQGDPNYDAISIYDDGHNIWIDHNTFSGGSYNASGSHGDGLVDIKKDANYITISYNKF 195 (345)
T ss_pred eceEEEEeCCcEEEEeeEEEeeccCCCCCCcEEeccCCeEEEEEeeEeccccccccccCCCccEEeccCCcEEEEEeeee
Confidence 67788889999999999999876 4568888889999999999998 3333 667899999999
Q ss_pred C
Q 046181 174 G 174 (234)
Q Consensus 174 a 174 (234)
.
T Consensus 196 h 196 (345)
T COG3866 196 H 196 (345)
T ss_pred e
Confidence 4
No 6
>PF13229 Beta_helix: Right handed beta helix region; PDB: 2INV_C 2INU_C 1RU4_A.
Probab=96.81 E-value=0.0074 Score=47.33 Aligned_cols=62 Identities=23% Similarity=0.237 Sum_probs=27.8
Q ss_pred CCCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCccc----CceeEEEEceEE
Q 046181 110 GPKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEKR----QNMKVIVVNNHF 173 (234)
Q Consensus 110 ~~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k~----~~~~vT~hhN~f 173 (234)
...+++|.+.++..+.|+.|+|.+...+ +.+.. ..++++++|.|.+...+ ....+++.+|.|
T Consensus 20 ~~~~~gi~~~~~~~~~i~n~~i~~~~~g-i~~~~-~~~~~i~~~~~~~~~~~i~~~~~~~~~i~~~~i 85 (158)
T PF13229_consen 20 NNGGDGIHVSGSSNITIENCTISNGGYG-IYVSG-GSNVTISNNTISDNGSGIYVSGSSNITIENNRI 85 (158)
T ss_dssp SSSSECEEE-SSCESEEES-EEESSTTS-EEEEC-CES-EEES-EEES-SEEEECCS-CS-EEES-EE
T ss_pred eCCCeEEEEEcCCCeEEECeEEECCCcE-EEEec-CCCeEEECeEEEEccceEEEEecCCceecCcEE
Confidence 3355666666666666666666662222 34332 35566666666554422 333445555555
No 7
>PLN02793 Probable polygalacturonase
Probab=96.71 E-value=0.021 Score=55.53 Aligned_cols=97 Identities=15% Similarity=0.138 Sum_probs=64.8
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC-Ccc-----------cCceeEEEEceEECCCCC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN-QEK-----------RQNMKVIVVNNHFGPNRN 178 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~-h~k-----------~~~~~vT~hhN~fa~~~~ 178 (234)
...|||.+..++||+|.+|.+..+ |..+.++.++++|+|++|.+.. |-- +.-.+|++.++.| .++.
T Consensus 225 pNTDGIdi~~s~nV~I~n~~I~~g-DDcIaik~~s~nI~I~n~~c~~GhGisIGSlg~~~~~~~V~nV~v~n~~~-~~t~ 302 (443)
T PLN02793 225 PNTDGIHISASRGVVIKDSIVRTG-DDCISIVGNSSRIKIRNIACGPGHGISIGSLGKSNSWSEVRDITVDGAFL-SNTD 302 (443)
T ss_pred CCCCcEeeeccceEEEEeCEEeCC-CCeEEecCCcCCEEEEEeEEeCCccEEEecccCcCCCCcEEEEEEEccEE-eCCC
Confidence 568999999999999999999866 8889999889999999999853 210 1234789999988 5553
Q ss_pred CCCC--CCCceeeecCCCCeEEEEceeEeCCCCCCC
Q 046181 179 QRLP--GYTQYAIGGSMNPSIKSQANLLIAPKVGNK 212 (234)
Q Consensus 179 ~R~P--~~~~y~ig~~~~a~vlvE~NyF~~~~~p~~ 212 (234)
.-.- .|.. +++.-..|.+++-..+++..|..
T Consensus 303 ~GirIKt~~g---~~G~v~nItf~ni~m~nv~~pI~ 335 (443)
T PLN02793 303 NGVRIKTWQG---GSGNASKITFQNIFMENVSNPII 335 (443)
T ss_pred ceEEEEEeCC---CCEEEEEEEEEeEEEecCCceEE
Confidence 2000 1100 01112245666666666655544
No 8
>PLN02188 polygalacturonase/glycoside hydrolase family protein
Probab=96.70 E-value=0.018 Score=55.32 Aligned_cols=99 Identities=16% Similarity=0.210 Sum_probs=68.5
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC-Cc-----------ccCceeEEEEceEECCCCC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN-QE-----------KRQNMKVIVVNNHFGPNRN 178 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~-h~-----------k~~~~~vT~hhN~fa~~~~ 178 (234)
...|||.++.++||+|.+|.+..+ |..+.++.++++|+|+++.... |- .++-.+|++.++.| .++.
T Consensus 203 pNtDGidi~~s~nV~I~n~~I~~G-DDcIaiksg~~nI~I~n~~c~~ghGisiGSlG~~~~~~~V~nV~v~n~~~-~~t~ 280 (404)
T PLN02188 203 PNTDGIHIERSSGVYISDSRIGTG-DDCISIGQGNSQVTITRIRCGPGHGISVGSLGRYPNEGDVTGLVVRDCTF-TGTT 280 (404)
T ss_pred CCCCcEeeeCcccEEEEeeEEeCC-CcEEEEccCCccEEEEEEEEcCCCcEEeCCCCCCCcCCcEEEEEEEeeEE-ECCC
Confidence 467999999999999999999887 5689999999999999998853 21 11345789999999 5553
Q ss_pred C--CCCCCCceeeecCCCCeEEEEceeEeCCCCCCC
Q 046181 179 Q--RLPGYTQYAIGGSMNPSIKSQANLLIAPKVGNK 212 (234)
Q Consensus 179 ~--R~P~~~~y~ig~~~~a~vlvE~NyF~~~~~p~~ 212 (234)
. |.-.|.... +.+.-..|.+|+-.++++..|..
T Consensus 281 ~GiriKt~~g~~-~~G~v~nI~f~ni~m~~v~~pI~ 315 (404)
T PLN02188 281 NGIRIKTWANSP-GKSAATNMTFENIVMNNVTNPII 315 (404)
T ss_pred cEEEEEEecCCC-CceEEEEEEEEeEEecCccceEE
Confidence 2 000111000 01112367888888888877754
No 9
>PLN02155 polygalacturonase
Probab=96.68 E-value=0.013 Score=56.09 Aligned_cols=103 Identities=10% Similarity=0.082 Sum_probs=68.0
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC-Cc-----------ccCceeEEEEceEECCCCC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN-QE-----------KRQNMKVIVVNNHFGPNRN 178 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~-h~-----------k~~~~~vT~hhN~fa~~~~ 178 (234)
+..|||.+..++||+|.+|.+..+ |..|.++.++++|+|++|.+.. |- .++-.+|++.++.| .++.
T Consensus 193 ~NtDGidi~~s~nV~I~~~~I~~g-DDcIaik~gs~nI~I~n~~c~~GhGisIGS~g~~~~~~~V~nV~v~n~~~-~~t~ 270 (394)
T PLN02155 193 PNTDGFHVQFSTGVTFTGSTVQTG-DDCVAIGPGTRNFLITKLACGPGHGVSIGSLAKELNEDGVENVTVSSSVF-TGSQ 270 (394)
T ss_pred CCCCccccccceeEEEEeeEEecC-CceEEcCCCCceEEEEEEEEECCceEEeccccccCCCCcEEEEEEEeeEE-eCCC
Confidence 457999999999999999999887 6688999999999999988863 32 11335899999999 5543
Q ss_pred CCCC--CCCceeeecCCCCeEEEEceeEeCCCCCCCccccc
Q 046181 179 QRLP--GYTQYAIGGSMNPSIKSQANLLIAPKVGNKKEQTF 217 (234)
Q Consensus 179 ~R~P--~~~~y~ig~~~~a~vlvE~NyF~~~~~p~~~~~~~ 217 (234)
.-.- .|. +-+++.-..|.+++-..+++..|..-.+.|
T Consensus 271 ~GirIKT~~--~~~gG~v~nI~f~ni~m~~v~~pI~i~q~Y 309 (394)
T PLN02155 271 NGVRIKSWA--RPSTGFVRNVFFQDLVMKNVENPIIIDQNY 309 (394)
T ss_pred cEEEEEEec--CCCCEEEEEEEEEeEEEcCccccEEEEecc
Confidence 2000 110 000111234666666666666665433334
No 10
>PLN03003 Probable polygalacturonase At3g15720
Probab=96.43 E-value=0.038 Score=54.09 Aligned_cols=97 Identities=20% Similarity=0.141 Sum_probs=68.3
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC-Cc-------cc----CceeEEEEceEECCCCC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN-QE-------KR----QNMKVIVVNNHFGPNRN 178 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~-h~-------k~----~~~~vT~hhN~fa~~~~ 178 (234)
...|||.+..++||+|.+|.++.+ |..|.++.++++|+|++|.+.. |- +. .-.+|++.++.| .++.
T Consensus 186 pNTDGIDi~~S~nV~I~n~~I~tG-DDCIaiksgs~NI~I~n~~c~~GHGISIGSlg~~g~~~~V~NV~v~n~~~-~~T~ 263 (456)
T PLN03003 186 PNTDGIDVGASSNVVIQDCIIATG-DDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNF-RGTM 263 (456)
T ss_pred CCCCcEeecCcceEEEEecEEecC-CCeEEeCCCCccEEEEeeEEECCCCeEEeeccCCCCcceEEEEEEEeeEE-ECCC
Confidence 568999999999999999999877 8889999999999999998753 21 10 245899999999 5553
Q ss_pred CCCC--CCCceeeecCCCCeEEEEceeEeCCCCCCC
Q 046181 179 QRLP--GYTQYAIGGSMNPSIKSQANLLIAPKVGNK 212 (234)
Q Consensus 179 ~R~P--~~~~y~ig~~~~a~vlvE~NyF~~~~~p~~ 212 (234)
.-.- .|.. +++.-..|.+|+-..+++..|..
T Consensus 264 nGvRIKT~~G---g~G~v~nItf~nI~m~nV~~pI~ 296 (456)
T PLN03003 264 NGARIKTWQG---GSGYARMITFNGITLDNVENPII 296 (456)
T ss_pred cEEEEEEeCC---CCeEEEEEEEEeEEecCccceEE
Confidence 2000 1210 11122357777777777777644
No 11
>PLN02218 polygalacturonase ADPG
Probab=96.28 E-value=0.039 Score=53.50 Aligned_cols=94 Identities=15% Similarity=0.218 Sum_probs=68.0
Q ss_pred ccccCCCCCeEEeeCCCcEEEEceeecc-----CCCCeeEeeeCCccEEEeCceecCCccc-----CceeEEEEceEECC
Q 046181 106 LLSEGPKPYAIRLVTTSKVWIDHNIRYE-----CQDGLIDVRRGSTDVTISNNWFRNQEKR-----QNMKVIVVNNHFGP 175 (234)
Q Consensus 106 g~i~~~~~DaI~i~~s~nVWIDHcsfs~-----~~Dglldi~~~s~~VTIS~n~f~~h~k~-----~~~~vT~hhN~fa~ 175 (234)
+.++.++.=.|.+..++||.|++.++.. -.|| +|+. .+++|+|++|.|..-++. +..+|++.++++.
T Consensus 208 itl~nSp~w~i~~~~~~nV~i~~v~I~a~~~spNTDG-Idi~-ss~nV~I~n~~I~tGDDcIaIksgs~nI~I~n~~c~- 284 (431)
T PLN02218 208 LRVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDG-IHIT-NTQNIRVSNSIIGTGDDCISIESGSQNVQINDITCG- 284 (431)
T ss_pred eEEEcCCCEEEEEEceeeEEEEEEEEeCCCCCCCCCc-Eeec-ccceEEEEccEEecCCceEEecCCCceEEEEeEEEE-
Confidence 4445667778888899999999999865 3566 7885 489999999999987766 6678999999883
Q ss_pred CCCCCCCCCCceeeecCCC-------CeEEEEceeEeCCCC
Q 046181 176 NRNQRLPGYTQYAIGGSMN-------PSIKSQANLLIAPKV 209 (234)
Q Consensus 176 ~~~~R~P~~~~y~ig~~~~-------a~vlvE~NyF~~~~~ 209 (234)
..+ .-.||+-+. ..|++|++.|.+...
T Consensus 285 ~GH-------GisIGS~g~~~~~~~V~nV~v~n~~~~~t~n 318 (431)
T PLN02218 285 PGH-------GISIGSLGDDNSKAFVSGVTVDGAKLSGTDN 318 (431)
T ss_pred CCC-------CEEECcCCCCCCCceEEEEEEEccEEecCCc
Confidence 211 123443221 258888888887654
No 12
>PF13229 Beta_helix: Right handed beta helix region; PDB: 2INV_C 2INU_C 1RU4_A.
Probab=96.24 E-value=0.028 Score=44.01 Aligned_cols=94 Identities=19% Similarity=0.115 Sum_probs=58.4
Q ss_pred CeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCccc----CceeEEEEceEECCCCC-------CCCC
Q 046181 114 YAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEKR----QNMKVIVVNNHFGPNRN-------QRLP 182 (234)
Q Consensus 114 DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k~----~~~~vT~hhN~fa~~~~-------~R~P 182 (234)
|||.+....++-|++|+|.......+.+.. +..++|.+|.|++...+ ...++++-+|.| .+.. +..+
T Consensus 1 ~Gi~i~~~~~~~i~~~~i~~~~~~gi~~~~-~~~~~i~n~~i~~~~~gi~~~~~~~~~i~~~~~-~~~~~~i~~~~~~~~ 78 (158)
T PF13229_consen 1 DGISINNGSNVTIRNCTISNNGGDGIHVSG-SSNITIENCTISNGGYGIYVSGGSNVTISNNTI-SDNGSGIYVSGSSNI 78 (158)
T ss_dssp -CEEETTCEC-EEESEEEESSSSECEEE-S-SCESEEES-EEESSTTSEEEECCES-EEES-EE-ES-SEEEECCS-CS-
T ss_pred CEEEEECCcCeEEeeeEEEeCCCeEEEEEc-CCCeEEECeEEECCCcEEEEecCCCeEEECeEE-EEccceEEEEecCCc
Confidence 689999999999999999998666677754 56699999999993333 457799999999 5554 1111
Q ss_pred --------CCCceeeecCC-CCeEEEEceeEeCCCC
Q 046181 183 --------GYTQYAIGGSM-NPSIKSQANLLIAPKV 209 (234)
Q Consensus 183 --------~~~~y~ig~~~-~a~vlvE~NyF~~~~~ 209 (234)
+-..+++.... .+.+.+++|.|.....
T Consensus 79 ~i~~~~i~~~~~~gi~~~~~~~~~~i~~n~~~~~~~ 114 (158)
T PF13229_consen 79 TIENNRIENNGDYGIYISNSSSNVTIENNTIHNNGG 114 (158)
T ss_dssp EEES-EEECSSS-SCE-TCEECS-EEES-EEECCTT
T ss_pred eecCcEEEcCCCccEEEeccCCCEEEEeEEEEeCcc
Confidence 12234554444 5667778888877663
No 13
>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein. Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.
Probab=95.98 E-value=0.073 Score=49.26 Aligned_cols=97 Identities=16% Similarity=0.133 Sum_probs=60.4
Q ss_pred CCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCccc------------------------------
Q 046181 112 KPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEKR------------------------------ 161 (234)
Q Consensus 112 ~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k~------------------------------ 161 (234)
..+||.+..++++-|.+|.++...|--+-+. .|++++|.+|.+++-..+
T Consensus 106 ~~~GI~~~~s~~v~I~~n~i~g~~d~GIyv~-~s~~~~v~nN~~~~n~~GI~i~~S~~~~v~~N~~~~N~~Gi~v~~~p~ 184 (314)
T TIGR03805 106 GAYGIYPVESTNVLVEDSYVRGASDAGIYVG-QSQNIVVRNNVAEENVAGIEIENSQNADVYNNIATNNTGGILVFDLPG 184 (314)
T ss_pred CcceEEEeccCCEEEECCEEECCCcccEEEC-CCCCeEEECCEEccCcceEEEEecCCcEEECCEEeccceeEEEeecCC
Confidence 4677888888888888888877766445554 467777777776652222
Q ss_pred ----CceeEEEEceEECCCCCCCCCCC---------CceeeecCCCCeEEEEceeEeCCCCC
Q 046181 162 ----QNMKVIVVNNHFGPNRNQRLPGY---------TQYAIGGSMNPSIKSQANLLIAPKVG 210 (234)
Q Consensus 162 ----~~~~vT~hhN~fa~~~~~R~P~~---------~~y~ig~~~~a~vlvE~NyF~~~~~p 210 (234)
...++.++||.| .+....+-.+ ...++-......+.+++|.|.+-..+
T Consensus 185 ~~~~~s~~~~v~~N~i-~~n~~~n~~~~gn~v~~~~~g~Gi~i~~~~~v~I~~N~i~~n~~~ 245 (314)
T TIGR03805 185 LPQPGGSNVRVFDNII-FDNNTPNFAPAGSIVASVPAGTGVVVMANRDVEIFGNVISNNDTA 245 (314)
T ss_pred CCcCCccceEEECCEE-ECCCCCCCcccCCceecCCCCcEEEEEcccceEEECCEEeCCcce
Confidence 123788888988 4553332111 11233233346789999999887653
No 14
>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein. Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.
Probab=95.76 E-value=0.08 Score=49.00 Aligned_cols=66 Identities=21% Similarity=0.201 Sum_probs=50.8
Q ss_pred ccccCCCCCeEEeeCCCcEEEEceeeccCC--------CCeeEeeeCCccEEEeCceecCCcc-c----CceeEEEEceE
Q 046181 106 LLSEGPKPYAIRLVTTSKVWIDHNIRYECQ--------DGLIDVRRGSTDVTISNNWFRNQEK-R----QNMKVIVVNNH 172 (234)
Q Consensus 106 g~i~~~~~DaI~i~~s~nVWIDHcsfs~~~--------Dglldi~~~s~~VTIS~n~f~~h~k-~----~~~~vT~hhN~ 172 (234)
..++...+++|.+.++++|-|.+|.+.|.. +| |.. ..+++++|.+|.+++... + ...++.+.+|.
T Consensus 70 ltI~~~~~~GI~v~~s~~i~I~n~~i~~~~~~~~~~~~~G-I~~-~~s~~v~I~~n~i~g~~d~GIyv~~s~~~~v~nN~ 147 (314)
T TIGR03805 70 LAVENTKGDGVKVKGSDGIIIRRLRVEWTGGPKSSNGAYG-IYP-VESTNVLVEDSYVRGASDAGIYVGQSQNIVVRNNV 147 (314)
T ss_pred eEEEcCCCCeEEEeCCCCEEEEeeEEEeccCccccCCcce-EEE-eccCCEEEECCEEECCCcccEEECCCCCeEEECCE
Confidence 344556679999999999999999998642 34 444 358999999999987543 3 45678899998
Q ss_pred E
Q 046181 173 F 173 (234)
Q Consensus 173 f 173 (234)
+
T Consensus 148 ~ 148 (314)
T TIGR03805 148 A 148 (314)
T ss_pred E
Confidence 8
No 15
>PF00295 Glyco_hydro_28: Glycosyl hydrolases family 28; InterPro: IPR000743 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 28 GH28 from CAZY comprises enzymes with several known activities; polygalacturonase (3.2.1.15 from EC); exo-polygalacturonase (3.2.1.67 from EC); exo-polygalacturonase (3.2.1.82 from EC); rhamnogalacturonase (EC not defined). Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovora or Ralstonia solanacearum (Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase (3.2.1.82 from EC) (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases.; GO: 0004650 polygalacturonase activity, 0005975 carbohydrate metabolic process; PDB: 1KCC_A 1KCD_A 1K5C_A 1HG8_A 2IQ7_A 2UVF_B 1RMG_A 1CZF_B 3JUR_C 1BHE_A ....
Probab=95.69 E-value=0.059 Score=49.86 Aligned_cols=65 Identities=18% Similarity=0.197 Sum_probs=51.3
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC-Cccc------C-----ceeEEEEceEECCCC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN-QEKR------Q-----NMKVIVVNNHFGPNR 177 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~-h~k~------~-----~~~vT~hhN~fa~~~ 177 (234)
...|||.+.+++||.|++|.+..+ |..+.++.++.+|+|++|.+.. |--. + -.+|+|.++.| .++
T Consensus 140 ~NtDGid~~~s~nv~I~n~~i~~g-DD~Iaiks~~~ni~v~n~~~~~ghGisiGS~~~~~~~~~i~nV~~~n~~i-~~t 216 (326)
T PF00295_consen 140 PNTDGIDIDSSKNVTIENCFIDNG-DDCIAIKSGSGNILVENCTCSGGHGISIGSEGSGGSQNDIRNVTFENCTI-INT 216 (326)
T ss_dssp TS--SEEEESEEEEEEESEEEESS-SESEEESSEECEEEEESEEEESSSEEEEEEESSSSE--EEEEEEEEEEEE-ESE
T ss_pred CCcceEEEEeeeEEEEEEeecccc-cCcccccccccceEEEeEEEeccccceeeeccCCccccEEEeEEEEEEEe-ecc
Confidence 458999999999999999999877 8889999888899999999975 2211 2 24899999998 554
No 16
>smart00656 Amb_all Amb_all domain.
Probab=95.55 E-value=0.15 Score=43.95 Aligned_cols=88 Identities=18% Similarity=0.166 Sum_probs=59.0
Q ss_pred CCeEEeeCCCcEEEEceeeccCCC------CeeEeeeCCccEEEeCceecCC---------ccc------CceeEEEEce
Q 046181 113 PYAIRLVTTSKVWIDHNIRYECQD------GLIDVRRGSTDVTISNNWFRNQ---------EKR------QNMKVIVVNN 171 (234)
Q Consensus 113 ~DaI~i~~s~nVWIDHcsfs~~~D------glldi~~~s~~VTIS~n~f~~h---------~k~------~~~~vT~hhN 171 (234)
+-+|.+.+++||+|-|..|....+ ..|.+ .++++|.|-.|.|+.. .++ +...+|+..|
T Consensus 31 g~gl~i~~~~NVIirnl~i~~~~~~~~~~~D~i~~-~~~~~VwIDHct~s~~~~~~~~~~~~D~~~di~~~s~~vTvs~~ 109 (190)
T smart00656 31 GGGLTIKSVSNVIIRNLTIHDPKPVYGSDGDAISI-DGSSNVWIDHVSLSGCTVTGFGDDTYDGLIDIKNGSTYVTISNN 109 (190)
T ss_pred eeEEEEEecceEEEeCCEEECCccCCCCCCCEEEE-eCCCeEEEEccEeEcceeccCCCCCCCccEEECcccccEEEECc
Confidence 456777778899999999987532 35666 4589999999999874 222 5679999999
Q ss_pred EECCCCCCCCCCCCceeeecCCC------CeEEEEceeEeCCC
Q 046181 172 HFGPNRNQRLPGYTQYAIGGSMN------PSIKSQANLLIAPK 208 (234)
Q Consensus 172 ~fa~~~~~R~P~~~~y~ig~~~~------a~vlvE~NyF~~~~ 208 (234)
+|. +. |..-.+|.... .++-+.+|||.+..
T Consensus 110 ~f~-~h------~~~~liG~~d~~~~~~~~~vT~h~N~~~~~~ 145 (190)
T smart00656 110 YFH-NH------WKVMLLGHSDSDTDDGKMRVTIAHNYFGNLR 145 (190)
T ss_pred eEe-cC------CEEEEEccCCCccccccceEEEECcEEcCcc
Confidence 993 21 11222333221 25777888887654
No 17
>PLN02793 Probable polygalacturonase
Probab=95.38 E-value=0.16 Score=49.46 Aligned_cols=94 Identities=18% Similarity=0.194 Sum_probs=66.7
Q ss_pred ccccCCCCCeEEeeCCCcEEEEceeecc-----CCCCeeEeeeCCccEEEeCceecCCccc-----CceeEEEEceEECC
Q 046181 106 LLSEGPKPYAIRLVTTSKVWIDHNIRYE-----CQDGLIDVRRGSTDVTISNNWFRNQEKR-----QNMKVIVVNNHFGP 175 (234)
Q Consensus 106 g~i~~~~~DaI~i~~s~nVWIDHcsfs~-----~~Dglldi~~~s~~VTIS~n~f~~h~k~-----~~~~vT~hhN~fa~ 175 (234)
..++.++.=.|.+.+++||.|++.++.. -.|| ||+. .+++|+|++|.|+.-++. +..+|++.++.+.
T Consensus 193 itl~nSp~~~i~~~~~~nv~i~~l~I~~p~~spNTDG-Idi~-~s~nV~I~n~~I~~gDDcIaik~~s~nI~I~n~~c~- 269 (443)
T PLN02793 193 LNVIDSQQMHIAFTNCRRVTISGLKVIAPATSPNTDG-IHIS-ASRGVVIKDSIVRTGDDCISIVGNSSRIKIRNIACG- 269 (443)
T ss_pred eEEEcCCCeEEEEEccCcEEEEEEEEECCCCCCCCCc-Eeee-ccceEEEEeCEEeCCCCeEEecCCcCCEEEEEeEEe-
Confidence 3344556667788889999999999965 2566 6885 489999999999987766 5678999888873
Q ss_pred CCCCCCCCCCceeeecC----C---CCeEEEEceeEeCCCC
Q 046181 176 NRNQRLPGYTQYAIGGS----M---NPSIKSQANLLIAPKV 209 (234)
Q Consensus 176 ~~~~R~P~~~~y~ig~~----~---~a~vlvE~NyF~~~~~ 209 (234)
.- ..-.||+- + =..|.+|++.|.+...
T Consensus 270 ~G-------hGisIGSlg~~~~~~~V~nV~v~n~~~~~t~~ 303 (443)
T PLN02793 270 PG-------HGISIGSLGKSNSWSEVRDITVDGAFLSNTDN 303 (443)
T ss_pred CC-------ccEEEecccCcCCCCcEEEEEEEccEEeCCCc
Confidence 11 12334431 1 1248999999987654
No 18
>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A ....
Probab=95.07 E-value=0.15 Score=42.60 Aligned_cols=104 Identities=17% Similarity=0.139 Sum_probs=62.9
Q ss_pred eEEEEEcCCccccCCCCCeEEeeCCCcEEEEceeeccCCCCeeEee-------------------eCCccEEEeCceecC
Q 046181 97 DHLWAIHPPLLSEGPKPYAIRLVTTSKVWIDHNIRYECQDGLIDVR-------------------RGSTDVTISNNWFRN 157 (234)
Q Consensus 97 i~gi~I~~~g~i~~~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~-------------------~~s~~VTIS~n~f~~ 157 (234)
+.|+.|..+........++|.+..+++++|++|++.......+.+. .++..+.++++.+..
T Consensus 96 i~nl~i~~~~~~~~~~~~~i~~~~~~~~~i~nv~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (225)
T PF12708_consen 96 IRNLTIDGNGIDPNNNNNGIRFNSSQNVSISNVRIENSGGDGIYFNTGTDYRIIGSTHVSGIFIDNGSNNVIVNNCIFNG 175 (225)
T ss_dssp EEEEEEEETCGCE-SCEEEEEETTEEEEEEEEEEEES-SS-SEEEECCEECEEECCEEEEEEEEESCEEEEEEECEEEES
T ss_pred EEeeEEEcccccCCCCceEEEEEeCCeEEEEeEEEEccCccEEEEEccccCcEeecccceeeeeccceeEEEECCccccC
Confidence 5666666333222223578888899999999999987533333322 112223344444444
Q ss_pred Cccc---CceeEEEEceEECCCCCCCCCCCCceeeecCCCCeEEEEceeEeCCC
Q 046181 158 QEKR---QNMKVIVVNNHFGPNRNQRLPGYTQYAIGGSMNPSIKSQANLLIAPK 208 (234)
Q Consensus 158 h~k~---~~~~vT~hhN~fa~~~~~R~P~~~~y~ig~~~~a~vlvE~NyF~~~~ 208 (234)
...+ +...+++++|+| .+. ...+|....+..+.+++|.|++..
T Consensus 176 ~~~g~~~~~~~~~i~n~~~-~~~-------~~~gi~i~~~~~~~i~n~~i~~~~ 221 (225)
T PF12708_consen 176 GDNGIILGNNNITISNNTF-EGN-------CGNGINIEGGSNIIISNNTIENCD 221 (225)
T ss_dssp SSCSEECEEEEEEEECEEE-ESS-------SSESEEEEECSEEEEEEEEEESSS
T ss_pred CCceeEeecceEEEEeEEE-CCc-------cceeEEEECCeEEEEEeEEEECCc
Confidence 4333 346889999999 431 234665555567999999999864
No 19
>PF00295 Glyco_hydro_28: Glycosyl hydrolases family 28; InterPro: IPR000743 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 28 GH28 from CAZY comprises enzymes with several known activities; polygalacturonase (3.2.1.15 from EC); exo-polygalacturonase (3.2.1.67 from EC); exo-polygalacturonase (3.2.1.82 from EC); rhamnogalacturonase (EC not defined). Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovora or Ralstonia solanacearum (Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase (3.2.1.82 from EC) (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases.; GO: 0004650 polygalacturonase activity, 0005975 carbohydrate metabolic process; PDB: 1KCC_A 1KCD_A 1K5C_A 1HG8_A 2IQ7_A 2UVF_B 1RMG_A 1CZF_B 3JUR_C 1BHE_A ....
Probab=94.61 E-value=0.28 Score=45.38 Aligned_cols=90 Identities=20% Similarity=0.260 Sum_probs=61.5
Q ss_pred ccCCCCCeEEeeCCCcEEEEceeeccC-----CCCeeEeeeCCccEEEeCceecCCccc-----CceeEEEEceEECCCC
Q 046181 108 SEGPKPYAIRLVTTSKVWIDHNIRYEC-----QDGLIDVRRGSTDVTISNNWFRNQEKR-----QNMKVIVVNNHFGPNR 177 (234)
Q Consensus 108 i~~~~~DaI~i~~s~nVWIDHcsfs~~-----~Dglldi~~~s~~VTIS~n~f~~h~k~-----~~~~vT~hhN~fa~~~ 177 (234)
++.++.=.+.+..++||.|+|.++... .|| +|+. ++++|+|.+|.++..++. +..+|++.+++| .+.
T Consensus 110 ~~nsp~w~~~~~~~~nv~i~~i~I~~~~~~~NtDG-id~~-~s~nv~I~n~~i~~gDD~Iaiks~~~ni~v~n~~~-~~g 186 (326)
T PF00295_consen 110 IRNSPFWHIHINDCDNVTISNITINNPANSPNTDG-IDID-SSKNVTIENCFIDNGDDCIAIKSGSGNILVENCTC-SGG 186 (326)
T ss_dssp EES-SSESEEEESEEEEEEESEEEEEGGGCTS--S-EEEE-SEEEEEEESEEEESSSESEEESSEECEEEEESEEE-ESS
T ss_pred ecCCCeeEEEEEccCCeEEcceEEEecCCCCCcce-EEEE-eeeEEEEEEeecccccCcccccccccceEEEeEEE-ecc
Confidence 344555678999999999999998642 566 6875 589999999999987766 444899999999 332
Q ss_pred CCCCCCCCceeeecC-CC------CeEEEEceeEeCC
Q 046181 178 NQRLPGYTQYAIGGS-MN------PSIKSQANLLIAP 207 (234)
Q Consensus 178 ~~R~P~~~~y~ig~~-~~------a~vlvE~NyF~~~ 207 (234)
+ .-.||+- .+ ..|+++++.|.+.
T Consensus 187 h-------GisiGS~~~~~~~~~i~nV~~~n~~i~~t 216 (326)
T PF00295_consen 187 H-------GISIGSEGSGGSQNDIRNVTFENCTIINT 216 (326)
T ss_dssp S-------EEEEEEESSSSE--EEEEEEEEEEEEESE
T ss_pred c-------cceeeeccCCccccEEEeEEEEEEEeecc
Confidence 2 1334421 12 2567777777654
No 20
>PF00544 Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pectate lyase 4.2.2.2 from EC is an enzyme involved in the maceration and soft rotting of plant tissue. Pectate lyase is responsible for the eliminative cleavage of pectate, yielding oligosaccharides with 4-deoxy-alpha-D-mann-4-enuronosyl groups at their non-reducing ends. The protein is maximally expressed late in pollen development. It has been suggested that the pollen expression of pectate lyase genes might relate to a requirement for pectin degradation during pollen tube growth []. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail [,]. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Amb a 1, Amb a 2, Amb a 3, Cha o 1, Cup a 1, Cry j 1, Jun a 1. Two of the major allergens in the pollen of short ragweed (Ambrosia artemisiifolia) are Amb aI and Amb aII. The primary structure of Amb aII has been deduced and has been shown to share ~65% sequence identity with the Amb alpha I multigene family of allergens []. Members of the Amb aI/aII family include Nicotiana tabacum (Common tobacco) pectate lyase, which is similar to the deduced amino acid sequences of two pollen-specific pectate lyase genes identified in Solanum lycopersicum (Tomato) (Lycopersicon esculentum) []; Cry jI, a major allergenic glycoprotein of Cryptomeria japonica (Japanese cedar) - the most common pollen allergen in Japan []; and P56 and P59, which share sequence similarity with pectate lyases of plant pathogenic bacteria [].; PDB: 1O8M_A 1O8K_A 1O8E_A 1O8H_A 2PEC_A 1PLU_A 1O8I_A 1O8J_A 1O8D_A 1O8F_A ....
Probab=94.54 E-value=0.18 Score=43.74 Aligned_cols=91 Identities=16% Similarity=0.089 Sum_probs=56.2
Q ss_pred CCceEEEeEEecCCcc-ee-EEEEEc---CCccccCCCCCeEEee-CCCcEEEEceeeccC---------------CCCe
Q 046181 80 KLGTLRYGATLIPQKQ-CD-HLWAIH---PPLLSEGPKPYAIRLV-TTSKVWIDHNIRYEC---------------QDGL 138 (234)
Q Consensus 80 ~pgtlr~~~~i~~~~~-~i-~gi~I~---~~g~i~~~~~DaI~i~-~s~nVWIDHcsfs~~---------------~Dgl 138 (234)
+|.+|++.++|....+ -+ .+-.|- .+..+ .+-++.+. +++||+|-|..|... ....
T Consensus 1 ~~~ii~~~g~i~~~~~i~v~snkTi~G~g~~~~i---~~~G~~i~~~~~NVIirNl~~~~~~~~~~~~~~~~~~~~~~Da 77 (200)
T PF00544_consen 1 EPLIIKVSGTIDLKSPISVGSNKTIIGIGAGATI---IGGGLRIIKGASNVIIRNLRFRNVPVDPGPDWSGDGDSSDGDA 77 (200)
T ss_dssp S-EEEEEHHCCHHHCEEEEESSEEEEEETTTTEE---ESSEEEEEESCEEEEEES-EEECEEEECSTEEETTEEECS--S
T ss_pred CcEEEEEEeEEccCCeEEECCCcEEEEccCCeEE---ECceEEEecCCCeEEEECCEEEeccccCCcccCCCccccCCCe
Confidence 4677888886632111 11 222222 22222 24577776 899999999999982 2234
Q ss_pred eEeeeCCccEEEeCceecCC--------ccc------CceeEEEEceEEC
Q 046181 139 IDVRRGSTDVTISNNWFRNQ--------EKR------QNMKVIVVNNHFG 174 (234)
Q Consensus 139 ldi~~~s~~VTIS~n~f~~h--------~k~------~~~~vT~hhN~fa 174 (234)
+.+. ++++|.|-.|.|+.. .++ +...||+.+|+|.
T Consensus 78 i~i~-~~~nVWIDH~sfs~~~~~~~~~~~Dg~idi~~~s~~vTiS~n~f~ 126 (200)
T PF00544_consen 78 ISID-NSSNVWIDHCSFSWGNFECNSDSSDGLIDIKKGSDNVTISNNIFD 126 (200)
T ss_dssp EEEE-STEEEEEES-EEEETTS-GGGSSSSSSEEEESSTEEEEEES-EEE
T ss_pred EEEE-ecccEEEeccEEeccccccccccCCceEEEEeCCceEEEEchhcc
Confidence 6665 678999999999987 443 6689999999994
No 21
>PLN03010 polygalacturonase
Probab=94.53 E-value=1.2 Score=43.23 Aligned_cols=113 Identities=17% Similarity=0.170 Sum_probs=68.5
Q ss_pred EEEEEcCCccccCCCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC-Cc-------cc----Ccee
Q 046181 98 HLWAIHPPLLSEGPKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN-QE-------KR----QNMK 165 (234)
Q Consensus 98 ~gi~I~~~g~i~~~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~-h~-------k~----~~~~ 165 (234)
+||.|..+. .....|||.+..++||+|.+|.+..+ |..|.++.++++++|.++.... |- ++ .-.+
T Consensus 194 ~~i~I~a~~--~s~NTDGiDi~~s~nV~I~n~~I~~g-DDcIaiksgs~ni~I~~~~C~~gHGisIGS~g~~~~~~~V~n 270 (409)
T PLN03010 194 SKINILAPE--TSPNTDGIDISYSTNINIFDSTIQTG-DDCIAINSGSSNINITQINCGPGHGISVGSLGADGANAKVSD 270 (409)
T ss_pred EEEEEeCCC--CCCCCCceeeeccceEEEEeeEEecC-CCeEEecCCCCcEEEEEEEeECcCCEEEccCCCCCCCCeeEE
Confidence 555555322 23568999999999999999999877 8889999888777777665542 21 11 1357
Q ss_pred EEEEceEECCCCCCCCC--CCCceeeecCCCCeEEEEceeEeCCCCCCCccccc
Q 046181 166 VIVVNNHFGPNRNQRLP--GYTQYAIGGSMNPSIKSQANLLIAPKVGNKKEQTF 217 (234)
Q Consensus 166 vT~hhN~fa~~~~~R~P--~~~~y~ig~~~~a~vlvE~NyF~~~~~p~~~~~~~ 217 (234)
|++.++.| .++..-.- .|.. +.+.-..|.+|+-..++++.|..-.+-|
T Consensus 271 V~v~n~~i-~~t~~GirIKt~~G---~~G~v~nItf~nI~m~~v~~pI~I~q~Y 320 (409)
T PLN03010 271 VHVTHCTF-NQTTNGARIKTWQG---GQGYARNISFENITLINTKNPIIIDQQY 320 (409)
T ss_pred EEEEeeEE-eCCCcceEEEEecC---CCEEEEEeEEEeEEEecCCccEEEEeec
Confidence 88888888 44422000 1110 0111124666666666666665433333
No 22
>PLN02188 polygalacturonase/glycoside hydrolase family protein
Probab=94.52 E-value=0.46 Score=45.81 Aligned_cols=101 Identities=16% Similarity=0.136 Sum_probs=70.9
Q ss_pred EEEEEcCCccccCCCCCeEEeeCCCcEEEEceeeccC-----CCCeeEeeeCCccEEEeCceecCCccc-----CceeEE
Q 046181 98 HLWAIHPPLLSEGPKPYAIRLVTTSKVWIDHNIRYEC-----QDGLIDVRRGSTDVTISNNWFRNQEKR-----QNMKVI 167 (234)
Q Consensus 98 ~gi~I~~~g~i~~~~~DaI~i~~s~nVWIDHcsfs~~-----~Dglldi~~~s~~VTIS~n~f~~h~k~-----~~~~vT 167 (234)
.++.|+ +..++.++.=.|.+..++||.|++.++... .|| +|+. .+++|+|.+|.|..-++. +..+|+
T Consensus 164 ~nv~i~-gitl~nSp~w~i~~~~~~~v~i~~v~I~~~~~spNtDG-idi~-~s~nV~I~n~~I~~GDDcIaiksg~~nI~ 240 (404)
T PLN02188 164 NNTVVR-GITSVNSKFFHIALVECRNFKGSGLKISAPSDSPNTDG-IHIE-RSSGVYISDSRIGTGDDCISIGQGNSQVT 240 (404)
T ss_pred eeEEEe-CeEEEcCCCeEEEEEccccEEEEEEEEeCCCCCCCCCc-Eeee-CcccEEEEeeEEeCCCcEEEEccCCccEE
Confidence 344444 344556777788888999999999998752 566 6885 489999999999987766 666899
Q ss_pred EEceEECCCCCCCCCCCCceeeec----CC---CCeEEEEceeEeCCCC
Q 046181 168 VVNNHFGPNRNQRLPGYTQYAIGG----SM---NPSIKSQANLLIAPKV 209 (234)
Q Consensus 168 ~hhN~fa~~~~~R~P~~~~y~ig~----~~---~a~vlvE~NyF~~~~~ 209 (234)
+-+++.. +.+ .-.||+ .+ =..|++|++.|.+...
T Consensus 241 I~n~~c~-~gh-------GisiGSlG~~~~~~~V~nV~v~n~~~~~t~~ 281 (404)
T PLN02188 241 ITRIRCG-PGH-------GISVGSLGRYPNEGDVTGLVVRDCTFTGTTN 281 (404)
T ss_pred EEEEEEc-CCC-------cEEeCCCCCCCcCCcEEEEEEEeeEEECCCc
Confidence 9888773 211 123333 11 1258999999988753
No 23
>PLN03003 Probable polygalacturonase At3g15720
Probab=94.49 E-value=0.27 Score=48.26 Aligned_cols=93 Identities=16% Similarity=0.089 Sum_probs=65.7
Q ss_pred cccCCCCCeEEeeCCCcEEEEceeeccC-----CCCeeEeeeCCccEEEeCceecCCccc-----CceeEEEEceEECCC
Q 046181 107 LSEGPKPYAIRLVTTSKVWIDHNIRYEC-----QDGLIDVRRGSTDVTISNNWFRNQEKR-----QNMKVIVVNNHFGPN 176 (234)
Q Consensus 107 ~i~~~~~DaI~i~~s~nVWIDHcsfs~~-----~Dglldi~~~s~~VTIS~n~f~~h~k~-----~~~~vT~hhN~fa~~ 176 (234)
.++.++.=.|.+.+++||.|++.++... .|| +|+. .+++|+|.+|.+..-++. +..+|++.++.+. .
T Consensus 155 tl~NSp~w~i~i~~c~nV~i~~l~I~ap~~spNTDG-IDi~-~S~nV~I~n~~I~tGDDCIaiksgs~NI~I~n~~c~-~ 231 (456)
T PLN03003 155 THLDSPMAHIHISECNYVTISSLRINAPESSPNTDG-IDVG-ASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCG-P 231 (456)
T ss_pred EEecCCcEEEEEeccccEEEEEEEEeCCCCCCCCCc-Eeec-CcceEEEEecEEecCCCeEEeCCCCccEEEEeeEEE-C
Confidence 3345566777888899999999988752 566 7885 489999999999987766 6678999998883 2
Q ss_pred CCCCCCCCCceeeecCC-------CCeEEEEceeEeCCCC
Q 046181 177 RNQRLPGYTQYAIGGSM-------NPSIKSQANLLIAPKV 209 (234)
Q Consensus 177 ~~~R~P~~~~y~ig~~~-------~a~vlvE~NyF~~~~~ 209 (234)
.+ .-.||+-+ =..|.++++.|.+...
T Consensus 232 GH-------GISIGSlg~~g~~~~V~NV~v~n~~~~~T~n 264 (456)
T PLN03003 232 GH-------GISIGSLGKDGETATVENVCVQNCNFRGTMN 264 (456)
T ss_pred CC-------CeEEeeccCCCCcceEEEEEEEeeEEECCCc
Confidence 11 12333221 1257889999887643
No 24
>PF05048 NosD: Periplasmic copper-binding protein (NosD); InterPro: IPR007742 Bacterial nitrous oxide (N(2)O) reductase is the terminal oxidoreductase of a respiratory process that generates dinitrogen from N(2)O. To attain its functional state, the enzyme is subjected to a maturation process which involves the protein-driven synthesis of a unique copper-sulphur cluster and metallation of the binuclear Cu(A) site in the periplasm. NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme [].
Probab=94.02 E-value=0.33 Score=42.03 Aligned_cols=83 Identities=28% Similarity=0.231 Sum_probs=51.6
Q ss_pred CeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCccc----CceeEEEEceEECCCCCCCCCCCCceee
Q 046181 114 YAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEKR----QNMKVIVVNNHFGPNRNQRLPGYTQYAI 189 (234)
Q Consensus 114 DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k~----~~~~vT~hhN~fa~~~~~R~P~~~~y~i 189 (234)
+||.+..+.+..|..+.|+....| |.+. +++..+|+.|.|.+...+ ...+.++.+|.| .+. ..|++
T Consensus 80 ~Gi~l~~s~~~~I~~N~i~~n~~G-I~l~-~s~~~~I~~N~i~~~~~GI~l~~s~~n~I~~N~i-~~n-------~~~Gi 149 (236)
T PF05048_consen 80 YGIYLMGSSNNTISNNTISNNGYG-IYLY-GSSNNTISNNTISNNGYGIYLSSSSNNTITGNTI-SNN-------TDYGI 149 (236)
T ss_pred CCEEEEcCCCcEEECCEecCCCce-EEEe-eCCceEEECcEEeCCCEEEEEEeCCCCEEECeEE-eCC-------Cccce
Confidence 788888777668888888887774 3443 366678888888755444 445677778887 333 13344
Q ss_pred e-cCCCCeEEEEceeEeC
Q 046181 190 G-GSMNPSIKSQANLLIA 206 (234)
Q Consensus 190 g-~~~~a~vlvE~NyF~~ 206 (234)
. ........+.+|+|.+
T Consensus 150 ~~~~~s~~n~I~~N~f~N 167 (236)
T PF05048_consen 150 YFLSGSSGNTIYNNNFNN 167 (236)
T ss_pred EEeccCCCCEEECCCccC
Confidence 3 3333445555666633
No 25
>PLN02155 polygalacturonase
Probab=93.81 E-value=0.66 Score=44.61 Aligned_cols=92 Identities=14% Similarity=0.161 Sum_probs=66.1
Q ss_pred ccCCCCCeEEeeCCCcEEEEceeeccC-----CCCeeEeeeCCccEEEeCceecCCccc-----CceeEEEEceEECCCC
Q 046181 108 SEGPKPYAIRLVTTSKVWIDHNIRYEC-----QDGLIDVRRGSTDVTISNNWFRNQEKR-----QNMKVIVVNNHFGPNR 177 (234)
Q Consensus 108 i~~~~~DaI~i~~s~nVWIDHcsfs~~-----~Dglldi~~~s~~VTIS~n~f~~h~k~-----~~~~vT~hhN~fa~~~ 177 (234)
++.++.=.|.+.+++||.|+|.++... .|| +|+. .+++|+|++|.|+.-++. +..+|++.++.+. ..
T Consensus 163 l~nSp~w~i~~~~~~nv~i~~v~I~~p~~~~NtDG-idi~-~s~nV~I~~~~I~~gDDcIaik~gs~nI~I~n~~c~-~G 239 (394)
T PLN02155 163 SMNSQVSHMTLNGCTNVVVRNVKLVAPGNSPNTDG-FHVQ-FSTGVTFTGSTVQTGDDCVAIGPGTRNFLITKLACG-PG 239 (394)
T ss_pred EEcCCCeEEEEECeeeEEEEEEEEECCCCCCCCCc-cccc-cceeEEEEeeEEecCCceEEcCCCCceEEEEEEEEE-CC
Confidence 345566778888899999999998653 465 6874 489999999999987766 5568999988883 11
Q ss_pred CCCCCCCCceeeecC-----CC--CeEEEEceeEeCCCC
Q 046181 178 NQRLPGYTQYAIGGS-----MN--PSIKSQANLLIAPKV 209 (234)
Q Consensus 178 ~~R~P~~~~y~ig~~-----~~--a~vlvE~NyF~~~~~ 209 (234)
..-.||+- .+ -.|.++++.|.....
T Consensus 240 -------hGisIGS~g~~~~~~~V~nV~v~n~~~~~t~~ 271 (394)
T PLN02155 240 -------HGVSIGSLAKELNEDGVENVTVSSSVFTGSQN 271 (394)
T ss_pred -------ceEEeccccccCCCCcEEEEEEEeeEEeCCCc
Confidence 12344442 11 268999999987653
No 26
>PF14592 Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OFL_A 1DBO_A 1DBG_A.
Probab=93.56 E-value=0.11 Score=50.47 Aligned_cols=85 Identities=16% Similarity=0.177 Sum_probs=32.4
Q ss_pred CCcEEEEceeeccCCC---C--eeEe---eeCCccEEEeCceecCCccc---------------CceeEEEEceEECCCC
Q 046181 121 TSKVWIDHNIRYECQD---G--LIDV---RRGSTDVTISNNWFRNQEKR---------------QNMKVIVVNNHFGPNR 177 (234)
Q Consensus 121 s~nVWIDHcsfs~~~D---g--lldi---~~~s~~VTIS~n~f~~h~k~---------------~~~~vT~hhN~fa~~~ 177 (234)
+.|.-+.||.|..... + ..-+ .--.++=.|.+|.|.+.... ...+-.+|||||+ .
T Consensus 98 a~~~RlT~~vi~~fn~~~~~~~~~wv~~~~l~G~~NrvDhn~F~gK~~~G~~l~V~~~~~~~~~~~~~h~IdhNyF~-~- 175 (425)
T PF14592_consen 98 ANHCRLTNCVIDDFNNPDREESDNWVTIYSLYGKHNRVDHNYFQGKTNRGPTLAVRVILNGSQSIANYHRIDHNYFG-P- 175 (425)
T ss_dssp SSS-EEES-EEES--SS-S-SEEE---TT-----S-EEES-EEE---SSS-SEEE--S--SS-------EEES-EEE---
T ss_pred ecceEEEeEEeeccCCcccccCceEEEEEEeeccCceEEccEeeccccCCcEEEEEecccCccccccCceEEecccc-c-
Confidence 6677777877775311 1 1112 11245667899999874322 1124578999994 2
Q ss_pred CCCCC--CCCceee--e----cCCCCeEEEEceeEeCCCC
Q 046181 178 NQRLP--GYTQYAI--G----GSMNPSIKSQANLLIAPKV 209 (234)
Q Consensus 178 ~~R~P--~~~~y~i--g----~~~~a~vlvE~NyF~~~~~ 209 (234)
|.| ..+..+| | +...+..++|+|||++...
T Consensus 176 --rp~~g~NggEtIRiG~S~~S~~~s~t~Ve~NlFe~cdG 213 (425)
T PF14592_consen 176 --RPPKGGNGGETIRIGTSHSSMSDSNTTVENNLFERCDG 213 (425)
T ss_dssp --E---SSS---SEEE-SSTT-B-----EEES-EEEEE-S
T ss_pred --cCCCCCCCceeEEEecccccccccceeeecchhhhcCC
Confidence 433 2233333 2 2235789999999998653
No 27
>PLN03010 polygalacturonase
Probab=93.43 E-value=0.71 Score=44.65 Aligned_cols=91 Identities=16% Similarity=0.188 Sum_probs=56.9
Q ss_pred cCCCCCeEEeeCCCcEEEEceeecc-----CCCCeeEeeeCCccEEEeCceecCCccc-----CceeEEEEceEECCCCC
Q 046181 109 EGPKPYAIRLVTTSKVWIDHNIRYE-----CQDGLIDVRRGSTDVTISNNWFRNQEKR-----QNMKVIVVNNHFGPNRN 178 (234)
Q Consensus 109 ~~~~~DaI~i~~s~nVWIDHcsfs~-----~~Dglldi~~~s~~VTIS~n~f~~h~k~-----~~~~vT~hhN~fa~~~~ 178 (234)
+.++.=.|.+.+++||.|++.++.. -.|| +|+. .+++|+|++|.+..-++. +..++.+..+...
T Consensus 176 ~nsp~~~i~i~~~~nv~i~~i~I~a~~~s~NTDG-iDi~-~s~nV~I~n~~I~~gDDcIaiksgs~ni~I~~~~C~---- 249 (409)
T PLN03010 176 IDSPKNHISIKTCNYVAISKINILAPETSPNTDG-IDIS-YSTNINIFDSTIQTGDDCIAINSGSSNINITQINCG---- 249 (409)
T ss_pred EcCCceEEEEeccccEEEEEEEEeCCCCCCCCCc-eeee-ccceEEEEeeEEecCCCeEEecCCCCcEEEEEEEeE----
Confidence 3445556666677888888887654 2456 6875 489999999999987766 4445555555541
Q ss_pred CCCCCCCceeeecCC--C-----CeEEEEceeEeCCCC
Q 046181 179 QRLPGYTQYAIGGSM--N-----PSIKSQANLLIAPKV 209 (234)
Q Consensus 179 ~R~P~~~~y~ig~~~--~-----a~vlvE~NyF~~~~~ 209 (234)
|. ..-.||+-+ + ..|.+|+++|.+...
T Consensus 250 ---~g-HGisIGS~g~~~~~~~V~nV~v~n~~i~~t~~ 283 (409)
T PLN03010 250 ---PG-HGISVGSLGADGANAKVSDVHVTHCTFNQTTN 283 (409)
T ss_pred ---Cc-CCEEEccCCCCCCCCeeEEEEEEeeEEeCCCc
Confidence 11 123344321 1 257888888887654
No 28
>PF14592 Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OFL_A 1DBO_A 1DBG_A.
Probab=93.42 E-value=0.11 Score=50.59 Aligned_cols=61 Identities=20% Similarity=0.229 Sum_probs=26.9
Q ss_pred CCcEEEEceeeccCC--CCeeEee-------eCCccEEEeCceecCCccc-----------------CceeEEEEceEEC
Q 046181 121 TSKVWIDHNIRYECQ--DGLIDVR-------RGSTDVTISNNWFRNQEKR-----------------QNMKVIVVNNHFG 174 (234)
Q Consensus 121 s~nVWIDHcsfs~~~--Dglldi~-------~~s~~VTIS~n~f~~h~k~-----------------~~~~vT~hhN~fa 174 (234)
.+|--||||.|..-. +-++-+. ....+-+|.+|+|.++... ..-+.++.||||
T Consensus 130 G~~NrvDhn~F~gK~~~G~~l~V~~~~~~~~~~~~~h~IdhNyF~~rp~~g~NggEtIRiG~S~~S~~~s~t~Ve~NlF- 208 (425)
T PF14592_consen 130 GKHNRVDHNYFQGKTNRGPTLAVRVILNGSQSIANYHRIDHNYFGPRPPKGGNGGETIRIGTSHSSMSDSNTTVENNLF- 208 (425)
T ss_dssp --S-EEES-EEE---SSS-SEEE--S--SS-------EEES-EEE-E---SSS---SEEE-SSTT-B-----EEES-EE-
T ss_pred ccCceEEccEeeccccCCcEEEEEecccCccccccCceEEeccccccCCCCCCCceeEEEecccccccccceeeecchh-
Confidence 455558999999742 2334433 2335789999999964322 234789999999
Q ss_pred CCCCCCCC
Q 046181 175 PNRNQRLP 182 (234)
Q Consensus 175 ~~~~~R~P 182 (234)
++|++-.=
T Consensus 209 e~cdGE~E 216 (425)
T PF14592_consen 209 ERCDGEVE 216 (425)
T ss_dssp EEE-SSSE
T ss_pred hhcCCcee
Confidence 89998744
No 29
>PF05048 NosD: Periplasmic copper-binding protein (NosD); InterPro: IPR007742 Bacterial nitrous oxide (N(2)O) reductase is the terminal oxidoreductase of a respiratory process that generates dinitrogen from N(2)O. To attain its functional state, the enzyme is subjected to a maturation process which involves the protein-driven synthesis of a unique copper-sulphur cluster and metallation of the binuclear Cu(A) site in the periplasm. NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme [].
Probab=89.94 E-value=1.1 Score=38.80 Aligned_cols=84 Identities=19% Similarity=0.105 Sum_probs=60.6
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCccc----CceeEEEEceEECCCCCCCCCCCCc
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEKR----QNMKVIVVNNHFGPNRNQRLPGYTQ 186 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k~----~~~~vT~hhN~fa~~~~~R~P~~~~ 186 (234)
...|+|.+..++++-|..++++....| +.+.. +..++|++|.|.+...+ ...+.++..|-| .+...
T Consensus 33 ~~~~gi~~~~s~~~~I~~n~i~~~~~G-I~~~~-s~~~~i~~n~i~~n~~Gi~l~~s~~~~I~~N~i-~~n~~------- 102 (236)
T PF05048_consen 33 NSRDGIYVENSDNNTISNNTISNNRYG-IHLMG-SSNNTIENNTISNNGYGIYLMGSSNNTISNNTI-SNNGY------- 102 (236)
T ss_pred eCCCEEEEEEcCCeEEEeeEEECCCeE-EEEEc-cCCCEEEeEEEEccCCCEEEEcCCCcEEECCEe-cCCCc-------
Confidence 457888888999999999999988556 45543 67799999999887655 333458999988 33322
Q ss_pred eeeecCCCCeEEEEceeEe
Q 046181 187 YAIGGSMNPSIKSQANLLI 205 (234)
Q Consensus 187 y~ig~~~~a~vlvE~NyF~ 205 (234)
+|.........+++|.|.
T Consensus 103 -GI~l~~s~~~~I~~N~i~ 120 (236)
T PF05048_consen 103 -GIYLYGSSNNTISNNTIS 120 (236)
T ss_pred -eEEEeeCCceEEECcEEe
Confidence 554444455778999886
No 30
>COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis, outer membrane]
Probab=87.92 E-value=3.2 Score=41.77 Aligned_cols=63 Identities=17% Similarity=0.158 Sum_probs=46.5
Q ss_pred CCCeEEeeCCCcEEEEceeeccCCCCeeEee-----------eCCccEEEeCceecCCccc---------CceeEEEEce
Q 046181 112 KPYAIRLVTTSKVWIDHNIRYECQDGLIDVR-----------RGSTDVTISNNWFRNQEKR---------QNMKVIVVNN 171 (234)
Q Consensus 112 ~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~-----------~~s~~VTIS~n~f~~h~k~---------~~~~vT~hhN 171 (234)
..|+|.++.++||-|+-|.|+.+ |..+-++ ..+.+|+|++|+|..-.-+ +-.+|++-.|
T Consensus 286 NtDG~d~~sc~NvlI~~~~fdtg-DD~I~iksg~~~~~~~~~~~~~~i~i~~c~~~~ghG~~v~Gse~~ggv~ni~ved~ 364 (542)
T COG5434 286 NTDGFDPGSCSNVLIEGCRFDTG-DDCIAIKSGAGLDGKKGYGPSRNIVIRNCYFSSGHGGLVLGSEMGGGVQNITVEDC 364 (542)
T ss_pred CCCccccccceeEEEeccEEecC-CceEEeecccCCcccccccccccEEEecceecccccceEeeeecCCceeEEEEEee
Confidence 57999999999999999999985 4444333 2345799999999842111 4457888888
Q ss_pred EECCC
Q 046181 172 HFGPN 176 (234)
Q Consensus 172 ~fa~~ 176 (234)
.| .+
T Consensus 365 ~~-~~ 368 (542)
T COG5434 365 VM-DN 368 (542)
T ss_pred ee-cc
Confidence 88 55
No 31
>PF08480 Disaggr_assoc: Disaggregatase related; InterPro: IPR013687 The members of this family are disaggregatases and several hypothetical proteins of the archaeal genus Methanosarcina. Disaggregatases cause aggregates to separate into single cells [] and contain parallel beta-helix repeats. Also see IPR010671 from INTERPRO.
Probab=85.43 E-value=1.9 Score=37.93 Aligned_cols=44 Identities=14% Similarity=0.072 Sum_probs=27.3
Q ss_pred CceeEEEEceEECCCCCCCCC--CCCceeeecCCCC-eEEEEceeEeCCCC
Q 046181 162 QNMKVIVVNNHFGPNRNQRLP--GYTQYAIGGSMNP-SIKSQANLLIAPKV 209 (234)
Q Consensus 162 ~~~~vT~hhN~fa~~~~~R~P--~~~~y~ig~~~~a-~vlvE~NyF~~~~~ 209 (234)
....|-+|||.| . ..+++| .|.. ||- ..|. ..++|+|+|+..-.
T Consensus 32 ~a~nVhIhhN~f-Y-~tGtn~~~~wvG-GIv-~sGF~ntlIENNVfDG~y~ 78 (198)
T PF08480_consen 32 SAKNVHIHHNIF-Y-DTGTNPNIDWVG-GIV-TSGFYNTLIENNVFDGVYH 78 (198)
T ss_pred ccccEEEECcEe-e-cCCcCCCCceee-eEE-eccccccEEEeeeeccccc
Confidence 445899999999 4 445566 4522 221 2233 56889999987643
No 32
>TIGR03808 RR_plus_rpt_1 twin-arg-translocated uncharacterized repeat protein. Members of this protein family have a Sec-independent twin-arginine tranlocation (TAT) signal sequence, which enables tranfer of proteins folded around prosthetic groups to cross the plasma membrane. These proteins have four copies of a repeat of about 23 amino acids that resembles the beta-helix repeat. Beta-helix refers to a structural motif in which successive beta strands wind around to stack parallel in a right-handed helix, as in AlgG and related enzymes of carbohydrate metabolism. The twin-arginine motif suggests that members of this protein family bind some unknown cofactor.
Probab=85.36 E-value=15 Score=36.27 Aligned_cols=83 Identities=14% Similarity=0.015 Sum_probs=51.1
Q ss_pred CcceeEEEEEcCCccccCCCCCeEEeeCCCcEEEEceeeccCC-CCeeEeeeCCccEEEeCceecCCccc-----CceeE
Q 046181 93 QKQCDHLWAIHPPLLSEGPKPYAIRLVTTSKVWIDHNIRYECQ-DGLIDVRRGSTDVTISNNWFRNQEKR-----QNMKV 166 (234)
Q Consensus 93 ~~~~i~gi~I~~~g~i~~~~~DaI~i~~s~nVWIDHcsfs~~~-Dglldi~~~s~~VTIS~n~f~~h~k~-----~~~~v 166 (234)
+...|.|+.|+..+.-.....-+|.+++++++-|.+|++.... -| +.+.. ++ ..|+.|.+.+.... ....+
T Consensus 115 ~nVTIsGLtIdGsG~dl~~rdAgI~v~~a~~v~Iedn~L~gsg~FG-I~L~~-~~-~~I~~N~I~g~~~~~I~lw~S~g~ 191 (455)
T TIGR03808 115 DGIGLSGLTLDGGGIPLPQRRGLIHCQGGRDVRITDCEITGSGGNG-IWLET-VS-GDISGNTITQIAVTAIVSFDALGL 191 (455)
T ss_pred CCeEEEeeEEEeCCCcccCCCCEEEEccCCceEEEeeEEEcCCcce-EEEEc-Cc-ceEecceEeccccceEEEeccCCC
Confidence 3335678888744433333455888888999999999998774 44 45543 44 66667666654222 23345
Q ss_pred EEEceEECCCCCC
Q 046181 167 IVVNNHFGPNRNQ 179 (234)
Q Consensus 167 T~hhN~fa~~~~~ 179 (234)
.+.+|.+ .++..
T Consensus 192 ~V~~N~I-~g~RD 203 (455)
T TIGR03808 192 IVARNTI-IGAND 203 (455)
T ss_pred EEECCEE-EccCC
Confidence 5666666 45555
No 33
>PF08480 Disaggr_assoc: Disaggregatase related; InterPro: IPR013687 The members of this family are disaggregatases and several hypothetical proteins of the archaeal genus Methanosarcina. Disaggregatases cause aggregates to separate into single cells [] and contain parallel beta-helix repeats. Also see IPR010671 from INTERPRO.
Probab=85.24 E-value=8.8 Score=33.87 Aligned_cols=90 Identities=29% Similarity=0.315 Sum_probs=61.5
Q ss_pred CCCcEEEEceeeccC-CCCeeEe-----eeCCccEEEeCceecCCccc---------------CceeEEEEceEECCCCC
Q 046181 120 TTSKVWIDHNIRYEC-QDGLIDV-----RRGSTDVTISNNWFRNQEKR---------------QNMKVIVVNNHFGPNRN 178 (234)
Q Consensus 120 ~s~nVWIDHcsfs~~-~Dglldi-----~~~s~~VTIS~n~f~~h~k~---------------~~~~vT~hhN~fa~~~~ 178 (234)
.+++|+|.|+.|... ....++. ..+-.+..|-+|.|++-.++ .+...++.+|.+ .++.
T Consensus 32 ~a~nVhIhhN~fY~tGtn~~~~wvGGIv~sGF~ntlIENNVfDG~y~aai~~~y~~~~~sp~gsgyttivRNNII-~NT~ 110 (198)
T PF08480_consen 32 SAKNVHIHHNIFYDTGTNPNIDWVGGIVTSGFYNTLIENNVFDGVYHAAIAQMYPDYDLSPKGSGYTTIVRNNII-VNTR 110 (198)
T ss_pred ccccEEEECcEeecCCcCCCCceeeeEEeccccccEEEeeeecccccceEEEEecccccCCCCCceEEEEEcceE-eeee
Confidence 467999999999985 2233332 12345778999999874332 456778999999 6999
Q ss_pred CCC--CCCCceeee--cCCCCeEEEEceeEeCCCCC
Q 046181 179 QRL--PGYTQYAIG--GSMNPSIKSQANLLIAPKVG 210 (234)
Q Consensus 179 ~R~--P~~~~y~ig--~~~~a~vlvE~NyF~~~~~p 210 (234)
.|. |.-..|++- -.+...+.+|+|-|-+-..-
T Consensus 111 ~r~~~~~GtGYgv~N~L~~tHsFvLenNclYnN~aG 146 (198)
T PF08480_consen 111 KRKSSPAGTGYGVINYLPETHSFVLENNCLYNNAAG 146 (198)
T ss_pred ecccCCCCceeEEEecCCCcceEEEEccceeccCcC
Confidence 774 455567764 34467788899988665443
No 34
>TIGR03808 RR_plus_rpt_1 twin-arg-translocated uncharacterized repeat protein. Members of this protein family have a Sec-independent twin-arginine tranlocation (TAT) signal sequence, which enables tranfer of proteins folded around prosthetic groups to cross the plasma membrane. These proteins have four copies of a repeat of about 23 amino acids that resembles the beta-helix repeat. Beta-helix refers to a structural motif in which successive beta strands wind around to stack parallel in a right-handed helix, as in AlgG and related enzymes of carbohydrate metabolism. The twin-arginine motif suggests that members of this protein family bind some unknown cofactor.
Probab=82.96 E-value=4.8 Score=39.65 Aligned_cols=45 Identities=16% Similarity=0.218 Sum_probs=38.3
Q ss_pred CCCeEEeeCCCcEEEEceeeccCC-CCeeEeeeCCccEEEeCceecCC
Q 046181 112 KPYAIRLVTTSKVWIDHNIRYECQ-DGLIDVRRGSTDVTISNNWFRNQ 158 (234)
Q Consensus 112 ~~DaI~i~~s~nVWIDHcsfs~~~-Dglldi~~~s~~VTIS~n~f~~h 158 (234)
-++||.+..+.+|+|..+.++++. |+..-. .|+++.|..|.|++-
T Consensus 238 ~GNGI~~~~a~~v~V~gN~I~~~r~dgI~~n--sss~~~i~~N~~~~~ 283 (455)
T TIGR03808 238 YGNAINAFRAGNVIVRGNRIRNCDYSAVRGN--SASNIQITGNSVSDV 283 (455)
T ss_pred ccccEEEEccCCeEEECCEEeccccceEEEE--cccCcEEECcEeeee
Confidence 389999999999999999999997 886543 478899999998863
No 35
>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A ....
Probab=75.01 E-value=8.4 Score=32.01 Aligned_cols=61 Identities=26% Similarity=0.372 Sum_probs=40.5
Q ss_pred eEEeeC-CCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC-Cccc----CceeEEEEceEECCCCCC
Q 046181 115 AIRLVT-TSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN-QEKR----QNMKVIVVNNHFGPNRNQ 179 (234)
Q Consensus 115 aI~i~~-s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~-h~k~----~~~~vT~hhN~fa~~~~~ 179 (234)
++.+++ +.+++++.|.+..+.++ + ..+.+++++++|.|.. ...+ ...++++.+|.| .+|..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~g-~--~~~~~~~~i~n~~~~~~~~~gi~i~~~~~~~i~n~~i-~~~~~ 222 (225)
T PF12708_consen 156 GIFIDNGSNNVIVNNCIFNGGDNG-I--ILGNNNITISNNTFEGNCGNGINIEGGSNIIISNNTI-ENCDD 222 (225)
T ss_dssp EEEEESCEEEEEEECEEEESSSCS-E--ECEEEEEEEECEEEESSSSESEEEEECSEEEEEEEEE-ESSSE
T ss_pred eeeeccceeEEEECCccccCCCce-e--EeecceEEEEeEEECCccceeEEEECCeEEEEEeEEE-ECCcc
Confidence 444443 23455566767777777 3 3334899999999987 4444 444589999999 67753
No 36
>TIGR03804 para_beta_helix parallel beta-helix repeat (two copies). This model represents a tandem pair of an approximately 22-amino acid (each) repeat homologous to the beta-strand repeats that stack in a right-handed parallel beta-helix in the periplasmic C-5 mannuronan epimerase, AlgA, of Pseudomonas aeruginosa. A homology domain consisting of a longer tandem array of these repeats is described in the SMART database as CASH (SM00722), and is found in many carbohydrate-binding proteins and sugar hydrolases. A single repeat is represented by SM00710. This TIGRFAMs model represents a flavor of the parallel beta-helix-forming repeat based on prokaryotic sequences only in its seed alignment, although it also finds many eukaryotic sequences.
Probab=68.14 E-value=13 Score=23.99 Aligned_cols=41 Identities=27% Similarity=0.260 Sum_probs=31.5
Q ss_pred eEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC
Q 046181 115 AIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN 157 (234)
Q Consensus 115 aI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~ 157 (234)
||.+..+++..|..+.++...|| |.+.. |++-+|..|.+.+
T Consensus 1 GI~l~~s~~~~i~~N~i~~~~~G-I~~~~-s~~n~i~~N~~~~ 41 (44)
T TIGR03804 1 GIYLESSSNNTLENNTASNNSYG-IYLTD-SSNNTLSNNTASS 41 (44)
T ss_pred CEEEEecCCCEEECcEEeCCCCE-EEEEe-CCCCEeECCEEEc
Confidence 57788888888999999998885 55544 6777888887765
No 37
>PF01696 Adeno_E1B_55K: Adenovirus EB1 55K protein / large t-antigen; InterPro: IPR002612 This family consists of adenovirus E1B 55 kDa protein or large t-antigen. E1B 55 kDa binds p53 the tumor suppressor protein converting it from a transcriptional activator which responds to damaged DNA in to an unregulated repressor of genes with a p53 binding site []. This protects the virus against p53 induced host antiviral responses and prevents apoptosis as induced by the adenovirus E1A protein []. The E1B region of adenovirus encodes two proteins E1B 55 kDa, the large t-antigen as found in this family and E1B 19 kDa IPR002924 from INTERPRO, the small t-antigen. Both of these proteins inhibit E1A induced apoptosis.
Probab=61.04 E-value=1.4e+02 Score=29.13 Aligned_cols=61 Identities=8% Similarity=-0.004 Sum_probs=49.4
Q ss_pred CCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCccc----CceeEEEEceEECCCC
Q 046181 113 PYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEKR----QNMKVIVVNNHFGPNR 177 (234)
Q Consensus 113 ~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k~----~~~~vT~hhN~fa~~~ 177 (234)
--++-+...+++.|--|.|..-.--.|+.. ....|.-|+|..-+|+ ++.++++.+|.| +.|
T Consensus 136 ~~g~~f~~~t~~~~hgC~F~gf~g~cl~~~---~~~~VrGC~F~~C~~gi~~~~~~~lsVk~C~F-ekC 200 (386)
T PF01696_consen 136 FSGVVFHANTNTLFHGCSFFGFHGTCLESW---AGGEVRGCTFYGCWKGIVSRGKSKLSVKKCVF-EKC 200 (386)
T ss_pred cceeEEEecceEEEEeeEEecCcceeEEEc---CCcEEeeeEEEEEEEEeecCCcceEEeeheee-ehe
Confidence 567778889999999999998877777764 4578899999888887 667888888888 554
No 38
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=47.17 E-value=20 Score=33.59 Aligned_cols=65 Identities=12% Similarity=0.043 Sum_probs=43.9
Q ss_pred cccccccCCCCCCCCCcEEEEEECCCCCCCCCCCCceEEEeEEecCCcceeEEEEEcCCccc-cCCCCCe-EEee
Q 046181 47 TCSMSFSGKITDNVGKDIVHYKVTDPGDDTINPKLGTLRYGATLIPQKQCDHLWAIHPPLLS-EGPKPYA-IRLV 119 (234)
Q Consensus 47 ~~a~Gfg~~tTGG~GG~v~~~~VTtl~D~~~~~~pgtlr~~~~i~~~~~~i~gi~I~~~g~i-~~~~~Da-I~i~ 119 (234)
+-+--+.+|..||.+-+. ++-++++. -+++.+...+....|++.|++||..+.| .++++|+ |.|+
T Consensus 212 dyas~~~rGisgga~dkl---~~~Sl~~s-----~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVy 278 (323)
T KOG0322|consen 212 DYASSCDRGISGGADDKL---VMYSLNHS-----TGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVY 278 (323)
T ss_pred eechhhcCCcCCCccccc---eeeeeccc-----cCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEE
Confidence 344556667888887777 78888885 5556556655668889999999955544 4555554 4443
No 39
>smart00710 PbH1 Parallel beta-helix repeats. The tertiary structures of pectate lyases and rhamnogalacturonase A show a stack of parallel beta strands that are coiled into a large helix. Each coil of the helix represents a structural repeat that, in some homologues, can be recognised from sequence information alone. Conservation of asparagines might be connected with asparagine-ladders that contribute to the stability of the fold. Proteins containing these repeats most often are enzymes with polysaccharide substrates.
Probab=32.81 E-value=58 Score=17.30 Aligned_cols=20 Identities=25% Similarity=0.136 Sum_probs=12.5
Q ss_pred CcEEEEceeeccCCCCeeEe
Q 046181 122 SKVWIDHNIRYECQDGLIDV 141 (234)
Q Consensus 122 ~nVWIDHcsfs~~~Dglldi 141 (234)
.+++|.+|.|+.....-+.+
T Consensus 2 ~~~~i~~n~i~~~~~~Gi~i 21 (26)
T smart00710 2 SNVTIENNTIRNNGGDGIYI 21 (26)
T ss_pred CCEEEECCEEEeCCCCcEEE
Confidence 46777777777766544444
No 40
>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.
Probab=31.51 E-value=57 Score=30.33 Aligned_cols=58 Identities=14% Similarity=0.184 Sum_probs=30.1
Q ss_pred eCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCccc-CceeEEEEceEECCCCCCCCC
Q 046181 119 VTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEKR-QNMKVIVVNNHFGPNRNQRLP 182 (234)
Q Consensus 119 ~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k~-~~~~vT~hhN~fa~~~~~R~P 182 (234)
.++++.-|++|+|. ||---+| .+.+|.+.+|.|.....- -..++.+-+.+|. ...|.+
T Consensus 16 f~~~d~~l~~~~f~---dGES~LK-es~nI~~~~~~F~~KYP~Wh~~~~~i~~~~f~--~~aRa~ 74 (277)
T PF12541_consen 16 FGSHDLRLENCTFA---DGESPLK-ESRNIELKNCIFKWKYPLWHSDNIKIENCYFT--EMARAA 74 (277)
T ss_pred cccCCCEEEeeEEe---CCCcccc-cccceEEECCEEeeECceEEECCeEEEeeEEe--ecceee
Confidence 45666666666665 3332233 356666666666542211 2234555555552 555555
No 41
>PF07822 Toxin_13: Neurotoxin B-IV-like protein; InterPro: IPR012497 The members of this family resemble neurotoxin B-IV (P01525 from SWISSPROT), which is a crustacean-selective neurotoxin produced by the marine worm Cerebratulus lacteus. This highly cationic peptide is approximately 55 residues and is arranged to form two antiparallel helices connected by a well-defined loop in a hairpin structure. The branches of the hairpin are linked by four disulphide bonds. Three residues identified as being important for activity, namely Arg-17, -25 and -34, are found on the same face of the molecule, while another residue important for activity, Trp30, is on the opposite side. The protein's mode of action is not entirely understood, but it may act on voltage-gated sodium channels, possibly by binding to an as yet uncharacterised site on these proteins. Its site of interaction may also be less specific, for example it may interact with negatively charged membrane lipids []. ; GO: 0019871 sodium channel inhibitor activity, 0009405 pathogenesis, 0005576 extracellular region; PDB: 1VIB_A.
Probab=31.27 E-value=18 Score=25.23 Aligned_cols=20 Identities=25% Similarity=0.461 Sum_probs=13.4
Q ss_pred hhhhhhccCCCccccccccc
Q 046181 27 VTDQCWRKNPNWHMHQCQVA 46 (234)
Q Consensus 27 ~~d~c~~~~~~w~~~~~~lA 46 (234)
.-|+|-||+.-|+-.|-.-|
T Consensus 19 ~yd~ci~cqgkwagkrgkca 38 (55)
T PF07822_consen 19 QYDDCIRCQGKWAGKRGKCA 38 (55)
T ss_dssp HHHHH--TTGGGTT-HHHHH
T ss_pred HhhHHheecceeccccCcch
Confidence 35899999999999885544
No 42
>PF02551 Acyl_CoA_thio: Acyl-CoA thioesterase; InterPro: IPR003703 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH). They consequently have the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. They may also be involved in the metabolic regulation of peroxisome proliferation. Thioesters play a central role in cells as they participate in metabolism, membrane synthesis, signal transduction, and gene regulation. Thioesterases catalyse the hydrolysis of thioesters to the thiol and carboxylic acid components. Many thioesterases have a hot dog fold, including YciA from Escherichia coli and its close sequence homologue HI0827 from Haemophilus influenzae (HiYciA) []. In Helicobacter pylori, YbgC also belongs to the hot-dog family of proteins, with a epsilongamma tetrameric arrangement []. YbgC proteins are bacterial acyl-CoA thioesterases associated with the Tol-Pal system. This system is important for cell envelope integrity and is part of the cell division machinery. However, the E. coli thioesterase II reveals a new tertiary fold: a 'double hot dog'. It has an internal repeat with a basic unit that is structurally similar to the recently described beta-hydroxydecanoyl thiol ester dehydrase []. ; GO: 0016291 acyl-CoA thioesterase activity, 0006637 acyl-CoA metabolic process; PDB: 1C8U_B 1TBU_B 3U0A_B.
Probab=28.79 E-value=95 Score=25.76 Aligned_cols=42 Identities=17% Similarity=0.190 Sum_probs=30.6
Q ss_pred CceeEEEEce-EECCCCCCCCCCCCceeeec--CCCCeEEEEceeEe
Q 046181 162 QNMKVIVVNN-HFGPNRNQRLPGYTQYAIGG--SMNPSIKSQANLLI 205 (234)
Q Consensus 162 ~~~~vT~hhN-~fa~~~~~R~P~~~~y~ig~--~~~a~vlvE~NyF~ 205 (234)
.++.||+-|. || + -.-|.=.|-.|.+.+ ..+++-+++|-+|.
T Consensus 72 ~~~~vSlDHs~wF-H-rpfr~ddWlLY~~~sp~A~~~Rgl~~G~~f~ 116 (131)
T PF02551_consen 72 PKFQVSLDHSMWF-H-RPFRADDWLLYAIESPSASGGRGLVRGRFFD 116 (131)
T ss_dssp CCEEEEEEEEEEE---S--BTTS-EEEEEEEEEEETTEEEEEECCEE
T ss_pred cccEEecceeEEE-c-CCCCCCCCEEEEEEcCccccCcccccCceEe
Confidence 5678899999 77 4 344444899998874 56899999999994
No 43
>COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis, outer membrane]
Probab=28.12 E-value=90 Score=31.62 Aligned_cols=63 Identities=13% Similarity=0.209 Sum_probs=46.8
Q ss_pred CCCCeEEeeC------------CCcEEEEceeeccCCCCeeEee---eCCccEEEeCceecCCccc-----------Cce
Q 046181 111 PKPYAIRLVT------------TSKVWIDHNIRYECQDGLIDVR---RGSTDVTISNNWFRNQEKR-----------QNM 164 (234)
Q Consensus 111 ~~~DaI~i~~------------s~nVWIDHcsfs~~~Dglldi~---~~s~~VTIS~n~f~~h~k~-----------~~~ 164 (234)
.+.|+|.+.. +++|||=||-|+.++-+++.-. .+-.+|++-+|.|.+.+.+ +..
T Consensus 307 tgDD~I~iksg~~~~~~~~~~~~~~i~i~~c~~~~ghG~~v~Gse~~ggv~ni~ved~~~~~~d~GLRikt~~~~gG~v~ 386 (542)
T COG5434 307 TGDDCIAIKSGAGLDGKKGYGPSRNIVIRNCYFSSGHGGLVLGSEMGGGVQNITVEDCVMDNTDRGLRIKTNDGRGGGVR 386 (542)
T ss_pred cCCceEEeecccCCcccccccccccEEEecceecccccceEeeeecCCceeEEEEEeeeeccCcceeeeeeecccceeEE
Confidence 4689998863 4679999999999988877633 3457999999999985544 234
Q ss_pred eEEEEceEE
Q 046181 165 KVIVVNNHF 173 (234)
Q Consensus 165 ~vT~hhN~f 173 (234)
+|+|+-|--
T Consensus 387 nI~~~~~~~ 395 (542)
T COG5434 387 NIVFEDNKM 395 (542)
T ss_pred EEEEecccc
Confidence 666666655
No 44
>COG3420 NosD Nitrous oxidase accessory protein [Inorganic ion transport and metabolism]
Probab=27.70 E-value=2e+02 Score=27.98 Aligned_cols=44 Identities=18% Similarity=0.169 Sum_probs=35.7
Q ss_pred CCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC
Q 046181 112 KPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN 157 (234)
Q Consensus 112 ~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~ 157 (234)
-+++|.+.++..+-|=-+++|...|+...- -|+.-+++.|.|++
T Consensus 149 rGnGI~vyNa~~a~V~~ndisy~rDgIy~~--~S~~~~~~gnr~~~ 192 (408)
T COG3420 149 RGNGIYVYNAPGALVVGNDISYGRDGIYSD--TSQHNVFKGNRFRD 192 (408)
T ss_pred ccCceEEEcCCCcEEEcCccccccceEEEc--ccccceecccchhh
Confidence 489999999999999999999999987643 25667777777765
No 45
>PRK03174 sspH acid-soluble spore protein H; Provisional
Probab=21.74 E-value=49 Score=23.87 Aligned_cols=18 Identities=11% Similarity=0.152 Sum_probs=12.7
Q ss_pred CeEEee-CCCcEEEEceee
Q 046181 114 YAIRLV-TTSKVWIDHNIR 131 (234)
Q Consensus 114 DaI~i~-~s~nVWIDHcsf 131 (234)
+-|.+. ...-|||+|++-
T Consensus 14 ~~i~VtY~G~pV~Ie~vde 32 (59)
T PRK03174 14 DMANVTYNGVPIYIQHVDE 32 (59)
T ss_pred cceEEEECCEEEEEEEEcC
Confidence 444443 578899999983
No 46
>PRK01625 sspH acid-soluble spore protein H; Provisional
Probab=20.65 E-value=53 Score=23.69 Aligned_cols=18 Identities=22% Similarity=0.355 Sum_probs=12.7
Q ss_pred CeEEee-CCCcEEEEceee
Q 046181 114 YAIRLV-TTSKVWIDHNIR 131 (234)
Q Consensus 114 DaI~i~-~s~nVWIDHcsf 131 (234)
+-|.+. ...-|||+|++-
T Consensus 14 ~~i~V~Y~G~pV~Iq~vde 32 (59)
T PRK01625 14 SRIDVTYEGVPVWIESCDE 32 (59)
T ss_pred cceEEEECCEEEEEEEEcC
Confidence 344443 478899999983
No 47
>PF03211 Pectate_lyase: Pectate lyase; InterPro: IPR004898 Pectate lyase is responsible for the maceration and soft-rotting of plant tissue. It catalyses the eliminative cleavage of pectate to produce oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends. Pectate lyase is an extracellular enzyme and is induced by pectin. It is subject to self-catabolite repression, and has been implicated in plant disease. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail []. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization.; GO: 0030570 pectate lyase activity, 0005576 extracellular region; PDB: 3T9G_B 3B90_B 3B8Y_A 3B4N_B 1EE6_A.
Probab=20.49 E-value=69 Score=28.66 Aligned_cols=51 Identities=22% Similarity=0.114 Sum_probs=35.7
Q ss_pred cCCCCCeEEeeCCC-cEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCcc
Q 046181 109 EGPKPYAIRLVTTS-KVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEK 160 (234)
Q Consensus 109 ~~~~~DaI~i~~s~-nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k 160 (234)
..-..||+++.+.. .+.|.-..+..+.|..|..- +.-.|+|++-...++-|
T Consensus 92 edVcEDA~T~kg~~~~~~I~ggga~~A~DKV~Q~N-g~Gtv~I~nF~a~d~GK 143 (215)
T PF03211_consen 92 EDVCEDAATFKGDGGTVTIIGGGARNASDKVFQHN-GGGTVTIKNFYAEDFGK 143 (215)
T ss_dssp SS-SSESEEEESSEEEEEEESTEEEEEEEEEEEE--SSEEEEEEEEEEEEEEE
T ss_pred cccceeeeEEcCCCceEEEeCCcccCCCccEEEec-CceeEEEEeEEEcCCCE
Confidence 44568888888766 88888888888888888764 34568888755545443
No 48
>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.
Probab=20.04 E-value=2.9e+02 Score=25.75 Aligned_cols=30 Identities=10% Similarity=0.197 Sum_probs=16.2
Q ss_pred CCccEEEeCceecCCccc-CceeEEEEceEE
Q 046181 144 GSTDVTISNNWFRNQEKR-QNMKVIVVNNHF 173 (234)
Q Consensus 144 ~s~~VTIS~n~f~~h~k~-~~~~vT~hhN~f 173 (234)
.+.||||-.+.+.+-.-+ -..++|+-++.+
T Consensus 173 n~eNVtVyDS~i~GEYLgW~SkNltliNC~I 203 (277)
T PF12541_consen 173 NCENVTVYDSVINGEYLGWNSKNLTLINCTI 203 (277)
T ss_pred cCCceEEEcceEeeeEEEEEcCCeEEEEeEE
Confidence 345666666666653222 223566666666
Done!