Query 046181
Match_columns 234
No_of_seqs 181 out of 701
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 16:28:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046181.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046181hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pxz_A Major pollen allergen J 100.0 2.8E-59 9.4E-64 432.0 15.5 207 25-234 1-344 (346)
2 3zsc_A Pectate trisaccharide-l 100.0 1.4E-45 4.9E-50 340.2 14.3 183 48-234 13-328 (340)
3 3vmv_A Pectate lyase; polysacc 100.0 3.7E-44 1.3E-48 329.1 9.8 184 47-234 2-322 (326)
4 2qy1_A Pectate lyase II; GAG l 100.0 1.2E-43 4.1E-48 325.5 10.1 183 48-234 1-324 (330)
5 1pe9_A Pectate lyase A; parall 100.0 1.7E-41 5.9E-46 315.1 11.9 159 48-209 13-292 (361)
6 2o04_A Pectate lyase, PL; hexa 100.0 6.4E-41 2.2E-45 314.7 13.8 163 44-210 6-331 (399)
7 1pcl_A Pectate lyase E; lyase 100.0 2.2E-40 7.4E-45 307.0 15.6 159 45-207 4-279 (355)
8 1vbl_A Pectate lyase 47; PL 47 100.0 3.6E-40 1.2E-44 311.0 14.4 162 44-209 6-335 (416)
9 1idk_A Pectin lyase A; signal, 100.0 3.6E-40 1.2E-44 305.9 9.4 163 44-210 2-282 (359)
10 1qcx_A Pectin lyase B; beta-he 100.0 6E-39 2E-43 297.6 7.4 165 44-211 2-283 (359)
11 1air_A Pectate lyase C, PELC; 100.0 9.9E-38 3.4E-42 289.0 8.2 156 48-209 3-262 (353)
12 3zsc_A Pectate trisaccharide-l 97.8 5.4E-05 1.8E-09 69.7 7.7 119 45-174 2-159 (340)
13 3gq8_A Preneck appendage prote 97.4 0.00079 2.7E-08 66.3 11.3 84 114-205 169-272 (609)
14 1bhe_A PEHA, polygalacturonase 97.4 0.001 3.6E-08 60.9 11.2 103 111-219 199-316 (376)
15 3gqn_A Preneck appendage prote 97.3 0.00054 1.9E-08 68.9 8.0 85 114-206 169-273 (772)
16 3jur_A EXO-poly-alpha-D-galact 96.9 0.0024 8.1E-08 60.4 8.3 65 111-177 236-322 (448)
17 1ia5_A Polygalacturonase; glyc 96.8 0.01 3.5E-07 53.8 11.7 91 111-211 156-264 (339)
18 2iq7_A Endopolygalacturonase; 96.8 0.01 3.5E-07 53.7 11.7 92 111-212 152-261 (339)
19 2uvf_A Exopolygalacturonase; G 96.7 0.0085 2.9E-07 58.5 10.5 92 111-210 378-494 (608)
20 1nhc_A Polygalacturonase I; be 96.6 0.014 4.8E-07 52.8 10.7 93 111-212 151-260 (336)
21 1rmg_A Rgase A, rhamnogalactur 96.5 0.0089 3E-07 55.9 9.0 63 111-177 174-246 (422)
22 1pxz_A Major pollen allergen J 96.4 0.015 5.1E-07 53.3 9.8 61 113-174 105-193 (346)
23 3vmv_A Pectate lyase; polysacc 96.2 0.015 5.3E-07 53.0 8.7 62 113-174 94-173 (326)
24 1czf_A Polygalacturonase II; b 96.1 0.032 1.1E-06 51.1 10.5 43 113-157 179-221 (362)
25 2qy1_A Pectate lyase II; GAG l 96.1 0.027 9.1E-07 51.2 9.6 61 113-173 85-171 (330)
26 2pyg_A Poly(beta-D-mannuronate 96.1 0.04 1.4E-06 49.3 10.5 46 111-157 170-216 (377)
27 1pcl_A Pectate lyase E; lyase 96.0 0.037 1.3E-06 51.0 10.4 61 113-174 95-193 (355)
28 1rmg_A Rgase A, rhamnogalactur 96.0 0.023 7.8E-07 53.1 9.1 72 98-173 136-216 (422)
29 1hg8_A Endopolygalacturonase; 96.0 0.037 1.3E-06 50.4 10.0 89 111-208 164-268 (349)
30 1qcx_A Pectin lyase B; beta-he 95.9 0.046 1.6E-06 50.3 10.3 61 113-174 123-197 (359)
31 1vbl_A Pectate lyase 47; PL 47 95.9 0.031 1.1E-06 52.6 9.2 61 113-174 147-249 (416)
32 1bhe_A PEHA, polygalacturonase 95.8 0.089 3E-06 48.0 12.0 99 99-208 161-276 (376)
33 3gqn_A Preneck appendage prote 95.8 0.024 8.3E-07 57.1 8.4 75 98-173 183-271 (772)
34 2uvf_A Exopolygalacturonase; G 95.7 0.14 4.6E-06 50.0 13.3 101 98-208 340-462 (608)
35 1ia5_A Polygalacturonase; glyc 95.7 0.054 1.8E-06 49.0 9.7 101 98-209 113-232 (339)
36 1idk_A Pectin lyase A; signal, 95.7 0.053 1.8E-06 50.0 9.8 60 113-174 123-197 (359)
37 3gq8_A Preneck appendage prote 95.7 0.033 1.1E-06 54.9 8.8 75 98-173 183-271 (609)
38 2iq7_A Endopolygalacturonase; 95.6 0.037 1.3E-06 50.1 8.2 100 98-208 109-227 (339)
39 3jur_A EXO-poly-alpha-D-galact 95.5 0.079 2.7E-06 50.0 10.4 102 98-207 199-322 (448)
40 1nhc_A Polygalacturonase I; be 95.3 0.066 2.2E-06 48.3 9.0 100 98-209 109-227 (336)
41 2o04_A Pectate lyase, PL; hexa 95.3 0.061 2.1E-06 50.3 8.8 60 113-174 142-243 (399)
42 1pe9_A Pectate lyase A; parall 95.2 0.076 2.6E-06 49.0 9.3 62 113-174 102-204 (361)
43 1hg8_A Endopolygalacturonase; 95.1 0.089 3.1E-06 47.8 9.1 45 112-158 187-238 (349)
44 1air_A Pectate lyase C, PELC; 94.8 0.13 4.5E-06 47.2 9.6 60 113-174 102-186 (353)
45 1k5c_A Endopolygalacturonase; 93.9 0.079 2.7E-06 48.0 5.8 64 110-177 149-221 (335)
46 1k5c_A Endopolygalacturonase; 93.2 0.091 3.1E-06 47.6 5.1 65 106-173 112-191 (335)
47 1czf_A Polygalacturonase II; b 92.9 0.09 3.1E-06 48.1 4.6 67 105-174 141-220 (362)
48 2pyg_A Poly(beta-D-mannuronate 92.8 0.83 2.8E-05 40.6 10.7 64 109-173 144-214 (377)
49 1dbg_A Chondroitinase B; beta 88.2 1.4 4.9E-05 42.2 8.2 82 124-209 254-352 (506)
50 1ogo_X Dextranase; hydrolase, 87.9 1.9 6.5E-05 42.0 9.0 56 113-173 375-440 (574)
51 1dbg_A Chondroitinase B; beta 83.8 1.7 5.8E-05 41.7 6.3 92 113-208 118-241 (506)
52 2inu_A Insulin fructotransfera 83.1 1.6 5.6E-05 41.0 5.7 95 111-210 229-340 (410)
53 2inu_A Insulin fructotransfera 81.6 13 0.00044 34.9 11.2 93 112-212 205-304 (410)
54 1ogo_X Dextranase; hydrolase, 76.6 0.97 3.3E-05 44.1 1.9 61 109-173 343-412 (574)
55 1ru4_A Pectate lyase, PEL9A; p 75.4 2.9 0.0001 38.7 4.8 46 111-157 127-172 (400)
56 1h80_A IOTA-carrageenase; hydr 73.2 1.8 6.1E-05 41.1 2.8 64 112-177 166-245 (464)
57 1x0c_A Isopullulanase; glycosi 70.8 1.8 6.3E-05 41.7 2.3 60 112-177 336-405 (549)
58 1x0c_A Isopullulanase; glycosi 70.5 2.9 0.0001 40.3 3.6 47 111-158 355-405 (549)
59 1h80_A IOTA-carrageenase; hydr 54.6 10 0.00036 35.8 4.1 60 112-173 189-268 (464)
60 1ru4_A Pectate lyase, PEL9A; p 53.3 43 0.0015 30.8 8.0 20 114-133 152-172 (400)
61 2vbk_A Tailspike-protein; vira 32.3 57 0.0019 31.4 5.3 20 138-157 211-230 (514)
62 1vib_A Neurotoxin B-IV; hydrox 30.7 11 0.00039 25.2 0.2 20 27-46 19-38 (55)
63 1gq8_A Pectinesterase; hydrola 28.2 3.1E+02 0.011 24.2 15.3 74 96-173 97-172 (319)
64 3t9g_A Pectate lyase; PL3, par 24.6 38 0.0013 28.8 2.3 46 111-157 85-130 (196)
No 1
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=100.00 E-value=2.8e-59 Score=431.98 Aligned_cols=207 Identities=38% Similarity=0.651 Sum_probs=172.2
Q ss_pred CChhhhhhccCCCccccccccccccccccCCCCCCCCCcEEEEEECCCCCCCCCCC------------CceEEEeE--Ee
Q 046181 25 MNVTDQCWRKNPNWHMHQCQVATCSMSFSGKITDNVGKDIVHYKVTDPGDDTINPK------------LGTLRYGA--TL 90 (234)
Q Consensus 25 ~n~~d~c~~~~~~w~~~~~~lA~~a~Gfg~~tTGG~GG~v~~~~VTtl~D~~~~~~------------pgtlr~~~--~i 90 (234)
+||||+||||+|+|+.+||+||+||||||++||||+||++ |+||+++|++.+|+ |++|++.+ +|
T Consensus 1 ~~~~~~c~~~~~~w~~~~~~~~~~a~Gfg~~ttGG~gG~v--~~VT~~~d~~~~~~~GsLr~av~~~~P~~Ivf~~~g~I 78 (346)
T 1pxz_A 1 DNPIDSCWRGDSNWDQNRMKLADCAVGFGSSTMGGKGGDF--YTVTSTDDNPVNPTPGTLRYGATREKALWIIFSQNMNI 78 (346)
T ss_dssp CCTTHHHHHSSCCTTTCGGGGGGCCCGGGTTCCTTTTSEE--EEECCCCCCTTSCCTTSHHHHHHCSSCEEEEESSCEEE
T ss_pred CCccchhhccCcchhhhhhhcccCCccccCCCcCCCCccE--EEECChHHcccccCcchhHHHhccCCCeEEEEcCCcEE
Confidence 6999999999999999999999999999999999999999 99999999754444 45554443 32
Q ss_pred cCCc-----------------------cee-----EEEEEcCCccc----------------------cCCCCCeEEeeC
Q 046181 91 IPQK-----------------------QCD-----HLWAIHPPLLS----------------------EGPKPYAIRLVT 120 (234)
Q Consensus 91 ~~~~-----------------------~~i-----~gi~I~~~g~i----------------------~~~~~DaI~i~~ 120 (234)
...+ .|| +||+|| ++.+ ...++|||+|++
T Consensus 79 ~l~~~l~V~sn~TI~G~ga~~~i~G~G~gi~i~~a~NVIIr-nl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~ 157 (346)
T 1pxz_A 79 KLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILH-SLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRN 157 (346)
T ss_dssp CCSSCEECCSSEEEECTTSCEEEETTSCCEEEESCEEEEEE-SCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEES
T ss_pred ecCccEEecCCeEEEccCCceEEeCCcceEEEEccCCEEEE-eeEEEeeccCCCceEEeccCcccccccCCCCCEEEEec
Confidence 1100 122 556665 1111 136799999999
Q ss_pred CCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCccc------------CceeEEEEceEECCCCCCCCC------
Q 046181 121 TSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEKR------------QNMKVIVVNNHFGPNRNQRLP------ 182 (234)
Q Consensus 121 s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k~------------~~~~vT~hhN~fa~~~~~R~P------ 182 (234)
++|||||||+|+|+.||++|+++++++||||||+|++|+|+ +.++||||||||++++.+|+|
T Consensus 158 s~nVwIDHcs~s~~~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r~g~ 237 (346)
T 1pxz_A 158 VTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGL 237 (346)
T ss_dssp CEEEEEESCEEECCSSEEEEEESSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEESSE
T ss_pred CceEEEEeeEEecCCCCcEeeccCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCccEecce
Confidence 99999999999999999999999999999999999999988 246999999999559999999
Q ss_pred ---------CCCceeeecCCCCeEEEEceeEeCCCCCCC-----------------------------------------
Q 046181 183 ---------GYTQYAIGGSMNPSIKSQANLLIAPKVGNK----------------------------------------- 212 (234)
Q Consensus 183 ---------~~~~y~ig~~~~a~vlvE~NyF~~~~~p~~----------------------------------------- 212 (234)
+|..|++++++++++++|+|||++++.|..
T Consensus 238 ~hv~NN~~~~~~~~~i~~~~~~~i~~egN~F~~~~~~~~k~v~~~~~~~~~~~~~~~~~~~~g~~~~nG~~~~~s~~~~~ 317 (346)
T 1pxz_A 238 VHVANNNYDPWNIYAIGGSSNPTILSEGNSFTAPSESYKKEVTKRIGCESPSACANWVWRSTRDAFINGAYFVSSGKTEE 317 (346)
T ss_dssp EEEESCEECCCSSCSEEEESCCEEEEESCEEECCSCGGGCBSEEECSCSCHHHHTTSCEEEESCEEETTCBCCCBSCCCC
T ss_pred EEEEeeEEEcccceEEeccCCceEEEECCEEECCCCCcccccEEEeccCCccccccccEecCCCeEEeceEecCCCCCcc
Confidence 577899999999999999999999876421
Q ss_pred -----cccccccccccchhhhcccCCC
Q 046181 213 -----KEQTFQVADAKSARSLTSESSV 234 (234)
Q Consensus 213 -----~~~~~~~~p~~~v~~~~~~~g~ 234 (234)
+.++|+++|+++|++||++||+
T Consensus 318 ~~~y~~~~~~~~~~~~~v~~~~~~aG~ 344 (346)
T 1pxz_A 318 TNIYNSNEAFKVENGNAAPQLTKNAGV 344 (346)
T ss_dssp CCCCCTTTCCCCCCGGGHHHHTTTCSS
T ss_pred CCCCCcccccccCCHHHHHHHhhhccC
Confidence 2245889999999999999996
No 2
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=100.00 E-value=1.4e-45 Score=340.22 Aligned_cols=183 Identities=18% Similarity=0.247 Sum_probs=155.3
Q ss_pred ccccccCCCCCCCCCcEEEEEECCCCCC---CCCCCCceEEEeEEecCC--cc--------------------ee-----
Q 046181 48 CSMSFSGKITDNVGKDIVHYKVTDPGDD---TINPKLGTLRYGATLIPQ--KQ--------------------CD----- 97 (234)
Q Consensus 48 ~a~Gfg~~tTGG~GG~v~~~~VTtl~D~---~~~~~pgtlr~~~~i~~~--~~--------------------~i----- 97 (234)
.|||||++||||+||++ |+|||++|| +..++|.+|+++++|... .+ +|
T Consensus 13 ~AeG~g~~ttGG~gG~v--~~VTtl~dLr~al~~~~PriIvv~G~I~~~~~~~l~v~snkTI~G~ga~~I~G~Gi~I~~a 90 (340)
T 3zsc_A 13 PTADLPEGTVGGLGGEI--VFVRTAEELEKYTTAEGKYVIVVDGTIVFEPKREIKVLSDKTIVGINDAKIVGGGLVIKDA 90 (340)
T ss_dssp CCSSCTTSCCTTTTSEE--EEECSHHHHHHHHTSSSCEEEEEEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEEEEEESC
T ss_pred cccccCCCCccCCCceE--EEeCCHHHHHHHHhCCCCEEEEECcEEEeCCcceEEecCCCEEEeccCcEEecCceEEEcC
Confidence 78999999999999999 999999999 677899999999998322 11 11
Q ss_pred EEEEEcCCccccC-----------CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCccc---C-
Q 046181 98 HLWAIHPPLLSEG-----------PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEKR---Q- 162 (234)
Q Consensus 98 ~gi~I~~~g~i~~-----------~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k~---~- 162 (234)
+||+|| ++.++. .++|+|+|++++|||||||+|+|+.||++|+++++++||||||+|++|+|. +
T Consensus 91 ~NVIIr-nl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~ 169 (340)
T 3zsc_A 91 QNVIIR-NIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGS 169 (340)
T ss_dssp EEEEEE-SCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSBCCEECC
T ss_pred ceEEEe-CeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCceeeEeCc
Confidence 455555 333321 279999999999999999999999999999999999999999999999988 1
Q ss_pred -----------ceeEEEEceEECCCCCCCCC---------------C----------CCceeeecCCCCeEEEEceeEeC
Q 046181 163 -----------NMKVIVVNNHFGPNRNQRLP---------------G----------YTQYAIGGSMNPSIKSQANLLIA 206 (234)
Q Consensus 163 -----------~~~vT~hhN~fa~~~~~R~P---------------~----------~~~y~ig~~~~a~vlvE~NyF~~ 206 (234)
+++|||||||| +++.+|+| + |..|++++++++++++|+|||++
T Consensus 170 sd~~~~~~d~g~~~vT~hhN~f-~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~~~a~i~~E~N~F~~ 248 (340)
T 3zsc_A 170 SDKEDPEQAGQAYKVTYHHNYF-KNLIQRMPRIRFGMAHVFNNFYSMGLRTGVSGNVFPIYGVASAMGAKVHVEGNYFMG 248 (340)
T ss_dssp CTTSCHHHHHHSCEEEEESCEE-ESCCBCTTEEESSEEEEESCEEECCCCCSCSSCCSCCEEEEEETTCEEEEESCEEEC
T ss_pred CCCCccccccCCcEEEEECeEe-cCCCCCCCcccCCeEEEEccEEECCccccccccceeeeeEecCCCCEEEEECcEEEC
Confidence 36999999999 79999999 6 88999999999999999999999
Q ss_pred CCC---------CCC------------------------------------------cccccccccccchhhh-cccCCC
Q 046181 207 PKV---------GNK------------------------------------------KEQTFQVADAKSARSL-TSESSV 234 (234)
Q Consensus 207 ~~~---------p~~------------------------------------------~~~~~~~~p~~~v~~~-~~~~g~ 234 (234)
++. |.. ..++|.++|++.|+++ +++||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~G~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~pY~Y~l~~a~~v~~~V~~~AG~ 328 (340)
T 3zsc_A 249 YGAVMAEAGIAFLPTRIMGPVEGYLTLGEGDAKNEFYYCKEPEVRPVEEGKPALDPREYYDYTLDPVQDVPKIVVDGAGA 328 (340)
T ss_dssp SCHHHHHTTCCBEEEEECTTTBCEEEECCGGGCCEEESBCCCCCBCSSTTSCSCCGGGTCCCCCCCGGGHHHHHHHHCST
T ss_pred CCcccccccccccccccCCCCceEEEecCcccceeeccCCCCccccccCCccccccCCCceeecCcHHHhhHHHhhcCCC
Confidence 877 321 0156899999999999 777774
No 3
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=100.00 E-value=3.7e-44 Score=329.09 Aligned_cols=184 Identities=24% Similarity=0.266 Sum_probs=152.5
Q ss_pred cccccccC---CCCCCCCCcEEEEEECCCCCC---CC-------CCCCceEEEeEEecCC---------c---------c
Q 046181 47 TCSMSFSG---KITDNVGKDIVHYKVTDPGDD---TI-------NPKLGTLRYGATLIPQ---------K---------Q 95 (234)
Q Consensus 47 ~~a~Gfg~---~tTGG~GG~v~~~~VTtl~D~---~~-------~~~pgtlr~~~~i~~~---------~---------~ 95 (234)
++|+|||+ +||||+||+| |+||||+|| ++ .++|.+|+|+|+|... + +
T Consensus 2 ~~~~Gfa~~nggTtGG~gG~v--v~Vttl~dL~~Al~~~~~~~~~~~p~iI~V~G~I~l~~~~~~~i~v~~~~~~~~~~s 79 (326)
T 3vmv_A 2 NGPQGYASMNGGTTGGAGGRV--EYASTGAQIQQLIDNRSRSNNPDEPLTIYVNGTITQGNSPQSLIDVKNHRGKAHEIK 79 (326)
T ss_dssp -CCSGGGGSTTCCCTTTTSEE--EEESSHHHHHHHHHHHHHSSCTTSCEEEEECSEEESTTCSSSSEEESCTTCTTSCEE
T ss_pred CCCceeeecCCCCccCCCCeE--EEECCHHHHHHHHhhcccccCCCCCEEEEEeeEEecCCCCCceEEEecccccccCCC
Confidence 58999998 7999999999 999999999 45 7899999999998432 1 1
Q ss_pred -----------ee----------EEEEEcCCcccc---CCCCCeEEeeC-CCcEEEEceeeccC---------CCCeeEe
Q 046181 96 -----------CD----------HLWAIHPPLLSE---GPKPYAIRLVT-TSKVWIDHNIRYEC---------QDGLIDV 141 (234)
Q Consensus 96 -----------~i----------~gi~I~~~g~i~---~~~~DaI~i~~-s~nVWIDHcsfs~~---------~Dglldi 141 (234)
+| +||+|| |+.++ ..++|+|+|++ ++|||||||+|+|+ +||++|+
T Consensus 80 n~TI~G~g~~~~i~G~gl~i~~a~NVIIr-Nl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di 158 (326)
T 3vmv_A 80 NISIIGVGTNGEFDGIGIRLSNAHNIIIQ-NVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDM 158 (326)
T ss_dssp EEEEEECTTCCEEESCCEEEESEEEEEEE-SCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEE
T ss_pred CeEEEecCCCeEEeCcEEEEEecceEEEE-CeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEe
Confidence 11 555555 34443 35799999997 99999999999975 5999999
Q ss_pred eeCCccEEEeCceecCCccc---C--------ceeEEEEceEECCCCCCCCC---------------CCCceeeecCCCC
Q 046181 142 RRGSTDVTISNNWFRNQEKR---Q--------NMKVIVVNNHFGPNRNQRLP---------------GYTQYAIGGSMNP 195 (234)
Q Consensus 142 ~~~s~~VTIS~n~f~~h~k~---~--------~~~vT~hhN~fa~~~~~R~P---------------~~~~y~ig~~~~a 195 (234)
++++++||||||+|++|+|+ + .++|||||||| +++.+|+| +|..|+++.++++
T Consensus 159 ~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~~~~~vT~~~N~f-~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~a 237 (326)
T 3vmv_A 159 KRNAEYITVSWNKFENHWKTMLVGHTDNASLAPDKITYHHNYF-NNLNSRVPLIRYADVHMFNNYFKDINDTAINSRVGA 237 (326)
T ss_dssp CTTCEEEEEESCEEEEEEECEEECSSSCGGGCCEEEEEESCEE-EEEEECTTEEESCEEEEESCEEEEESSCSEEEETTC
T ss_pred cCCCceEEEEceEEecCceEEEECCCCCCcccCccEEEEeeEe-cCCcCcCCcccCCcEEEEccEEECCCceEEeecCCc
Confidence 99999999999999999999 2 35899999999 79999999 5677899999999
Q ss_pred eEEEEceeEeCC------------CCCCC---------------------------------cccccccccccchhhh-c
Q 046181 196 SIKSQANLLIAP------------KVGNK---------------------------------KEQTFQVADAKSARSL-T 229 (234)
Q Consensus 196 ~vlvE~NyF~~~------------~~p~~---------------------------------~~~~~~~~p~~~v~~~-~ 229 (234)
++++|+|||+++ +.|.. ..++|+++|++.||++ .
T Consensus 238 ~v~~e~N~F~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~~~~n~~~n~~~~~~~~~~~~~p~Y~y~l~~a~~V~~~V~ 317 (326)
T 3vmv_A 238 RVFVENNYFDNVGSGQADPTTGFIKGPVGWFYGSPSTGYWNLRGNVFVNTPNSHLNSTTNFTPPYSYQVQSATQAKSSVE 317 (326)
T ss_dssp EEEEESCEEEEESCCSBCTTTCCBCSSEECCSCSSSBCEEEEESCEEESSCCTTCCCCCCCCCSSCCCCCCHHHHHHHHH
T ss_pred EEEEEceEEECCcCccccccccccccceeeccCCCCceEEEEECCeEccCcCcccCCCccccccCeeecCCHHHhhHHHh
Confidence 999999999998 43310 1257899999999998 6
Q ss_pred ccCCC
Q 046181 230 SESSV 234 (234)
Q Consensus 230 ~~~g~ 234 (234)
+.||+
T Consensus 318 ~~AG~ 322 (326)
T 3vmv_A 318 QHSGV 322 (326)
T ss_dssp HHCSS
T ss_pred ccCCC
Confidence 66664
No 4
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=100.00 E-value=1.2e-43 Score=325.52 Aligned_cols=183 Identities=22% Similarity=0.222 Sum_probs=150.7
Q ss_pred ccccccCCCCCCCCCcEEEEEECCCCCC---C---CCCCCceEEEeEEecCCc---------------c-----------
Q 046181 48 CSMSFSGKITDNVGKDIVHYKVTDPGDD---T---INPKLGTLRYGATLIPQK---------------Q----------- 95 (234)
Q Consensus 48 ~a~Gfg~~tTGG~GG~v~~~~VTtl~D~---~---~~~~pgtlr~~~~i~~~~---------------~----------- 95 (234)
+|||||++||||+||++ |+|||++|| + ..++|.+|+++++|.... +
T Consensus 1 ga~Gfa~~ttGG~gg~~--~~Vtt~~~L~~al~~~~~~~p~iI~~~G~i~~~~~~~~c~~~~~~~~~~~l~v~sn~TI~G 78 (330)
T 2qy1_A 1 GPVGYGAGTTGGGNKVP--VNVATFEAMQSAIDSYSGSGGLVLNYTGKFDFGTIKDVCAQWKLPAKTVQIKNKSDVTIKG 78 (330)
T ss_dssp CCCSTTTTCCTTTTSCC--EEECSHHHHHHHHHHSCSSSCEEEEECCBCCGGGCCCGGGSTTSCCCEEEEESCCSEEEEE
T ss_pred CCceeecCCCCCCCceE--EEcCCHHHHHHHHhccCCCCCEEEEEccEEecccccccccccccccceeEEEcCCCeEEEC
Confidence 58999999999999999 999999998 2 247999999998763221 1
Q ss_pred --------ee------EEEEEcCCccccC----CCCCeEEee-----CCCcEEEEceeeccCC-----------CCeeEe
Q 046181 96 --------CD------HLWAIHPPLLSEG----PKPYAIRLV-----TTSKVWIDHNIRYECQ-----------DGLIDV 141 (234)
Q Consensus 96 --------~i------~gi~I~~~g~i~~----~~~DaI~i~-----~s~nVWIDHcsfs~~~-----------Dglldi 141 (234)
+| +||+|| |+.++. +++|+|+|+ .++|||||||+|+|+. ||++|+
T Consensus 79 ~~a~i~g~gl~i~~~~~NVIIr-nl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi 157 (330)
T 2qy1_A 79 ANGSAANFGIRVVGNAHNVIIQ-NMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDM 157 (330)
T ss_dssp CTTCBBSSEEEEESSCEEEEEE-SCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEE
T ss_pred CCcEEeeeeEEEeCCCCeEEEe-CeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeeccccc
Confidence 11 455555 344432 368999999 5999999999999876 999999
Q ss_pred eeCCccEEEeCceecCCccc---C---------ceeEEEEceEECCCCCCCCC---------------CCCceeeecCCC
Q 046181 142 RRGSTDVTISNNWFRNQEKR---Q---------NMKVIVVNNHFGPNRNQRLP---------------GYTQYAIGGSMN 194 (234)
Q Consensus 142 ~~~s~~VTIS~n~f~~h~k~---~---------~~~vT~hhN~fa~~~~~R~P---------------~~~~y~ig~~~~ 194 (234)
++++++||||||+|++|+|+ + .++|||||||| +++.+|+| +|..|+++++++
T Consensus 158 ~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f-~~~~~R~Pr~r~G~~hv~NN~~~n~~~~~i~~~~~ 236 (330)
T 2qy1_A 158 KKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRF-ENVESRVPLQRFGLSHIYNNYFNNVTTSGINVRMG 236 (330)
T ss_dssp ESSCEEEEEESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEE-EEEEECTTEEESSEEEEESCEEEEECSCSEEEETT
T ss_pred ccCcceEEEEcceeccCCeEEEECCCCccccCCCceEEEECcEE-cCCCCCCCceecceEEEEeeEEEcccceEeccCCC
Confidence 99999999999999999998 2 27999999999 79999999 567789999999
Q ss_pred CeEEEEceeEeCCCCCCC-----------------------------------------------cccccccccccchhh
Q 046181 195 PSIKSQANLLIAPKVGNK-----------------------------------------------KEQTFQVADAKSARS 227 (234)
Q Consensus 195 a~vlvE~NyF~~~~~p~~-----------------------------------------------~~~~~~~~p~~~v~~ 227 (234)
+++++|+|||++++.|.. +.++|+++|++.|++
T Consensus 237 ~~i~~e~N~F~~~~~p~~~~~~~~~g~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~y~~~~a~~V~~ 316 (330)
T 2qy1_A 237 GIAKIESNYFENIKNPVTSRDSSEIGYWDLINNYVGSGITWGTPDGSKPYANATNWISTKVFPESLGYIYTVTPAAQVKA 316 (330)
T ss_dssp CEEEEESCEEEEEESSEEECSSSSBCEEEEESCEECSCEECCCCSSSSCCEECTTCCCSSCCCSCCCSCCCCCCGGGHHH
T ss_pred cEEEEEccEEECCCCceeeccCCCceeEEEeCCcccccccccccCcccccccccccCcccccccCCCceeeeCCHHHHHH
Confidence 999999999988754320 224688999999999
Q ss_pred h-cccCCC
Q 046181 228 L-TSESSV 234 (234)
Q Consensus 228 ~-~~~~g~ 234 (234)
+ ++.||+
T Consensus 317 ~V~~~AGa 324 (330)
T 2qy1_A 317 KVIATAGA 324 (330)
T ss_dssp HHHHHCST
T ss_pred hhHhccCC
Confidence 5 788874
No 5
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=100.00 E-value=1.7e-41 Score=315.05 Aligned_cols=159 Identities=25% Similarity=0.340 Sum_probs=132.9
Q ss_pred cccccc---CCCCCCCCC---cEEEEEECCCCCC---C-CCCCCceEEEeEEecCCc--------------c--------
Q 046181 48 CSMSFS---GKITDNVGK---DIVHYKVTDPGDD---T-INPKLGTLRYGATLIPQK--------------Q-------- 95 (234)
Q Consensus 48 ~a~Gfg---~~tTGG~GG---~v~~~~VTtl~D~---~-~~~~pgtlr~~~~i~~~~--------------~-------- 95 (234)
+++||| ++||||+|| +| |+|||++|| + ..++|.+|++.++|.... +
T Consensus 13 ~~~Gfa~~~~gtTGG~~g~~~~v--~~Vtt~~dL~~al~~~~~p~vI~V~GtI~~~~~~~~~s~~~~~~~~~l~v~snkT 90 (361)
T 1pe9_A 13 PTVGWASQNGFTTGGAAATSDNI--YIVTNISEFTSALSAGAEAKIIQIKGTIDISGGTPYTDFADQKARSQINIPANTT 90 (361)
T ss_dssp CSSSGGGSSSCCCTTTTCCGGGE--EEECSHHHHHHHHTTTTSCEEEEECSEEETTTTCCCCSHHHHHHHSEEECCSSEE
T ss_pred CCCceeecCCCCcCCCCCccccE--EEeCCHHHHHHHHhcCCCcEEEEECCEEecCCccccccccccccceeEEecCCcE
Confidence 379999 499999998 78 999999999 6 789999999999984321 1
Q ss_pred --------ee--EEEEE---c-------CCccccC---------------CCCCeEEeeC-CCcEEEEceeeccC-----
Q 046181 96 --------CD--HLWAI---H-------PPLLSEG---------------PKPYAIRLVT-TSKVWIDHNIRYEC----- 134 (234)
Q Consensus 96 --------~i--~gi~I---~-------~~g~i~~---------------~~~DaI~i~~-s~nVWIDHcsfs~~----- 134 (234)
+| .+|.| + ||+.++. .++|+|+|++ ++|||||||+|+|+
T Consensus 91 I~G~G~~~~i~g~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~ 170 (361)
T 1pe9_A 91 VIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDD 170 (361)
T ss_dssp EEECTTCCEEESSEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGG
T ss_pred EEccCCCeEEecCEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeeccccccc
Confidence 11 24444 2 2444431 4589999999 99999999999996
Q ss_pred ------------CCCeeEeeeCCccEEEeCceecCCccc--------------CceeEEEEceEECCCCCCCCC------
Q 046181 135 ------------QDGLIDVRRGSTDVTISNNWFRNQEKR--------------QNMKVIVVNNHFGPNRNQRLP------ 182 (234)
Q Consensus 135 ------------~Dglldi~~~s~~VTIS~n~f~~h~k~--------------~~~~vT~hhN~fa~~~~~R~P------ 182 (234)
.||+||+++++++||||||+|++|+|+ ++++|||||||| +|+.+|+|
T Consensus 171 ~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f-~~~~~R~Pr~R~G~ 249 (361)
T 1pe9_A 171 MYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVF-NRVTERAPRVRYGS 249 (361)
T ss_dssp GCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEE-EEEEECSSEESSCE
T ss_pred ccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEE-cCccccCcccccce
Confidence 699999999999999999999999988 246999999999 79999999
Q ss_pred ------------CCC----ceeeecCCCCeEEEEceeEeCCCC
Q 046181 183 ------------GYT----QYAIGGSMNPSIKSQANLLIAPKV 209 (234)
Q Consensus 183 ------------~~~----~y~ig~~~~a~vlvE~NyF~~~~~ 209 (234)
.|+ .|+++.++++++++|+|||++++.
T Consensus 250 ~Hv~NN~~~~~~~~~~~~~~ya~g~~~~~~i~~E~N~F~~~~~ 292 (361)
T 1pe9_A 250 IHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANL 292 (361)
T ss_dssp EEEESCEEEEETTCSSSCCCCSEEECTTCEEEEESCEEEEETC
T ss_pred EEEEcceEecccCCCccccceEecCCCCcEEEEECCEEECCCC
Confidence 233 688999999999999999998843
No 6
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=100.00 E-value=6.4e-41 Score=314.73 Aligned_cols=163 Identities=21% Similarity=0.300 Sum_probs=135.8
Q ss_pred ccccccccccC---CCCCCCCCc---EEEEEECCCCCC---C---CCCCCceEEEeEEecCC------------------
Q 046181 44 QVATCSMSFSG---KITDNVGKD---IVHYKVTDPGDD---T---INPKLGTLRYGATLIPQ------------------ 93 (234)
Q Consensus 44 ~lA~~a~Gfg~---~tTGG~GG~---v~~~~VTtl~D~---~---~~~~pgtlr~~~~i~~~------------------ 93 (234)
++...|+|||+ +||||++|+ | |+|||++|| + ++++|.+|++.++|...
T Consensus 6 ~~~~~a~Gfa~~~~gTTGG~~a~~~~v--~tVtt~aeL~~al~~~~~~~priI~v~GtId~~~~~~g~~~~c~~~~~~~~ 83 (399)
T 2o04_A 6 QTLGSNDGWGAYSTGTTGGSKASSSNV--YTVSNRNQLVSALGKETNTTPKIIYIKGTIDMNVDDNLKPLGLNDYKDPEY 83 (399)
T ss_dssp CCCCTTSSGGGSTTCCCTTTTCCGGGE--EEECSHHHHHHHHCCTTCCSCEEEEECSEEESSBCTTCCBCCHHHHCCTTC
T ss_pred cccCCCcceeecCCCCcCCCCCccceE--EEeCCHHHHHHHHHhccCCCCEEEEEcCEEecccCCccccccccccccCCc
Confidence 34468999998 999999997 8 999999999 4 67899999999998421
Q ss_pred ------------------------------------------cc-----------ee---------EEEEEcCCcccc--
Q 046181 94 ------------------------------------------KQ-----------CD---------HLWAIHPPLLSE-- 109 (234)
Q Consensus 94 ------------------------------------------~~-----------~i---------~gi~I~~~g~i~-- 109 (234)
.+ +| +||||| |+.|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~sg~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~g~gl~i~~~NVIIr-nl~i~~~ 162 (399)
T 2o04_A 84 DLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGNFQIKSDNVIIR-NIEFQDA 162 (399)
T ss_dssp CHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEESSSCCEEESCEEEECSEEEEEE-SCEEECC
T ss_pred chhhhhhcccccccccccCCCcccccccccccccccceEEEeCCCceEEeccCCeEEeeCEEEeeCCCEEEe-CeEEecC
Confidence 00 11 566666 33332
Q ss_pred -----------------CCCCCeEEeeCCCcEEEEceeeccC-----------------CCCeeEeeeCCccEEEeCcee
Q 046181 110 -----------------GPKPYAIRLVTTSKVWIDHNIRYEC-----------------QDGLIDVRRGSTDVTISNNWF 155 (234)
Q Consensus 110 -----------------~~~~DaI~i~~s~nVWIDHcsfs~~-----------------~Dglldi~~~s~~VTIS~n~f 155 (234)
..++|+|+|++++|||||||+|+|+ .||+||+++++++||||||+|
T Consensus 163 ~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f 242 (399)
T 2o04_A 163 YDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYY 242 (399)
T ss_dssp CCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEE
T ss_pred ccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEE
Confidence 1467999999999999999999996 599999999999999999999
Q ss_pred cCCccc-------------CceeEEEEceEECCCCCCCCC---------------CCC-------ceeeecCCCCeEEEE
Q 046181 156 RNQEKR-------------QNMKVIVVNNHFGPNRNQRLP---------------GYT-------QYAIGGSMNPSIKSQ 200 (234)
Q Consensus 156 ~~h~k~-------------~~~~vT~hhN~fa~~~~~R~P---------------~~~-------~y~ig~~~~a~vlvE 200 (234)
++|+|+ ++++|||||||| +++.+|+| +|. .|++++++++++++|
T Consensus 243 ~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f-~~~~~R~Pr~R~G~~Hv~NN~~~n~~~~~~~~~~ya~g~~~~~~i~~e 321 (399)
T 2o04_A 243 HDHDKSSIFGSSDSKTSDDGKLKITLHHNRY-KNIVQAAPRVRFGQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYAQ 321 (399)
T ss_dssp EEEEECCEESCCTTCGGGTTCCCEEEESCEE-EEEEECTTEESSCEEEEESCEEECCTTCSSSCCCCSEEECTTCEEEEE
T ss_pred cCCCceeEeCCCCCCccccCceeEEEECcEe-cCCcccCCCcccceEEEEcceEECCCCCCccceeeEeccCCCcEEEEE
Confidence 999998 246999999999 79999999 222 388999999999999
Q ss_pred ceeEeCCCCC
Q 046181 201 ANLLIAPKVG 210 (234)
Q Consensus 201 ~NyF~~~~~p 210 (234)
+|||+++..+
T Consensus 322 ~N~F~~~~~~ 331 (399)
T 2o04_A 322 NNVIDVPGLS 331 (399)
T ss_dssp SCEEECTTCC
T ss_pred ceEEECCCCC
Confidence 9999997443
No 7
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=100.00 E-value=2.2e-40 Score=306.96 Aligned_cols=159 Identities=21% Similarity=0.271 Sum_probs=132.6
Q ss_pred cccccccccC---CCCCCCCCc-EEEEEECCCCCC---C--CCCCCceEEEeEEecCCc--------------c------
Q 046181 45 VATCSMSFSG---KITDNVGKD-IVHYKVTDPGDD---T--INPKLGTLRYGATLIPQK--------------Q------ 95 (234)
Q Consensus 45 lA~~a~Gfg~---~tTGG~GG~-v~~~~VTtl~D~---~--~~~~pgtlr~~~~i~~~~--------------~------ 95 (234)
.+.+++|||+ +||||+||+ + |+|||++|| + ..++|.+|++.|+|.... +
T Consensus 4 ~~~~~~G~a~~~~gtTGG~~g~~v--~~Vtt~~~L~~al~~~~~~p~VI~V~GtI~~~~~~~~~s~~~~~~~~~l~v~sn 81 (355)
T 1pcl_A 4 TDAATTGWATQNGGTTGGAKAAKA--VEVKNISDFKKALNGTDSSAKIIKVTGPIDISGGKAYTSFDDQKARSQISIPSN 81 (355)
T ss_pred cccCCcceeecCCCCccCCCCceE--EEeCCHHHHHHHHhhCCCCcEEEEECCEEecCCccccccccccccceeEEeCCC
Confidence 3458899997 899999998 7 999999999 5 688999999999984321 1
Q ss_pred ----------ee----------EEEEEcCCccccC---------------CCCCeEEeeCCCcEEEEceeeccC------
Q 046181 96 ----------CD----------HLWAIHPPLLSEG---------------PKPYAIRLVTTSKVWIDHNIRYEC------ 134 (234)
Q Consensus 96 ----------~i----------~gi~I~~~g~i~~---------------~~~DaI~i~~s~nVWIDHcsfs~~------ 134 (234)
.| +||+|| |+.++. .++|+|+|++++|||||||+|+|+
T Consensus 82 ~TI~G~G~~~~i~g~gl~i~~~~NVIIr-nl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~ 160 (355)
T 1pcl_A 82 TTIIGVGSNGKFTNGSLVIKGVKNVILR-NLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDK 160 (355)
T ss_pred eEEEEecCCeEEecCEEEEecCCeEEEe-eeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccc
Confidence 11 344444 232221 458999999999999999999996
Q ss_pred -----------CCCeeEeeeCCccEEEeCceecCCccc--------------CceeEEEEceEECCCCCCCCC-------
Q 046181 135 -----------QDGLIDVRRGSTDVTISNNWFRNQEKR--------------QNMKVIVVNNHFGPNRNQRLP------- 182 (234)
Q Consensus 135 -----------~Dglldi~~~s~~VTIS~n~f~~h~k~--------------~~~~vT~hhN~fa~~~~~R~P------- 182 (234)
.||++|+++++++||||||+|++|+|+ ++++|||||||| +++.+|+|
T Consensus 161 ~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f-~~~~~R~PrvR~G~~ 239 (355)
T 1pcl_A 161 YTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVF-DRVTERAPRVRFGSI 239 (355)
T ss_pred cccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEE-eCCcccCCceecceE
Confidence 699999999999999999999999988 245899999999 79999999
Q ss_pred -----------CCC----ceeeecCCCCeEEEEceeEeCC
Q 046181 183 -----------GYT----QYAIGGSMNPSIKSQANLLIAP 207 (234)
Q Consensus 183 -----------~~~----~y~ig~~~~a~vlvE~NyF~~~ 207 (234)
+|+ .|+++.++++++++|+|||+++
T Consensus 240 Hv~NN~~~~~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~ 279 (355)
T 1pcl_A 240 HAYNNVYLGDVKHSVYPYLYSFGLGTSGSILSESNSFTLS 279 (355)
T ss_pred EEEcceEEcccCCCccccceEecCCCCcEEEEEccEEECC
Confidence 233 6889999999999999999998
No 8
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=100.00 E-value=3.6e-40 Score=311.04 Aligned_cols=162 Identities=25% Similarity=0.248 Sum_probs=134.0
Q ss_pred ccccccccccC---CCCCCCCCc---EEEEEECCCCCC---CC--------CCCCceEEEeEEecCCc------------
Q 046181 44 QVATCSMSFSG---KITDNVGKD---IVHYKVTDPGDD---TI--------NPKLGTLRYGATLIPQK------------ 94 (234)
Q Consensus 44 ~lA~~a~Gfg~---~tTGG~GG~---v~~~~VTtl~D~---~~--------~~~pgtlr~~~~i~~~~------------ 94 (234)
++..+|+|||+ +||||++|+ | |+|||++|| +. +++|.+|++.++|....
T Consensus 6 ~~~~~~~GfA~~~~gTTGG~~a~~~~v--~tVtt~aeL~~al~~~~~~~~~~~~priI~V~GtId~~~~~~g~~~~c~~~ 83 (416)
T 1vbl_A 6 EVLKPYDGWAAYGEGTTGGAMASPQNV--FVVTNRTELIQALGGNNHTNQYNSVPKIIYVKGTIDLNVDDNNQPVGPDFY 83 (416)
T ss_dssp CCCCTTSSGGGSTTCCCTTTTCCGGGE--EEECSHHHHHHHTTSCTTGGGGCCSCEEEEECSEEESSBCTTSCBCCHHHH
T ss_pred cccCCCcceeecCCCCcCCCCCccccE--EEeCCHHHHHHHHhccccccccCCCCEEEEECCEEecccCCCCcccccccc
Confidence 34468999998 999999996 8 999999999 43 35899999999984210
Q ss_pred -------------------------------------------c---------------------ee-----EEEEEcCC
Q 046181 95 -------------------------------------------Q---------------------CD-----HLWAIHPP 105 (234)
Q Consensus 95 -------------------------------------------~---------------------~i-----~gi~I~~~ 105 (234)
+ +| +||||| |
T Consensus 84 ~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~g~gl~i~~~~NVIIr-N 162 (416)
T 1vbl_A 84 KDPHFDFEAYLREYDPATWGKKEVEGPLEEARVRSQKKQKDRIMVYVGSNTSIIGVGKDAKIKGGGFLIKNVDNVIIR-N 162 (416)
T ss_dssp CCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEECTTCCEEESCEEEEESCEEEEEE-S
T ss_pred ccCCcchhhhhhhhCccccccccCCCCcccccccccccccceeEEEeCCCeeEEecCCCeEEecCEEEeecCceEEEe-C
Confidence 0 11 566666 3
Q ss_pred cccc-------------------CCCCCeEEeeCCCcEEEEceeeccC-----------------CCCeeEeeeCCccEE
Q 046181 106 LLSE-------------------GPKPYAIRLVTTSKVWIDHNIRYEC-----------------QDGLIDVRRGSTDVT 149 (234)
Q Consensus 106 g~i~-------------------~~~~DaI~i~~s~nVWIDHcsfs~~-----------------~Dglldi~~~s~~VT 149 (234)
+.|+ ..++|+|+|++++|||||||+|+|+ .||++|+++++++||
T Consensus 163 l~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~DGl~Di~~~s~~VT 242 (416)
T 1vbl_A 163 IEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFIT 242 (416)
T ss_dssp CEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEESSCEEEE
T ss_pred eEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeecccceeeecCCCcEE
Confidence 3332 1367999999999999999999996 599999999999999
Q ss_pred EeCceecCCccc-------------CceeEEEEceEECCCCCCCCC---------------C---C---CceeeecCCCC
Q 046181 150 ISNNWFRNQEKR-------------QNMKVIVVNNHFGPNRNQRLP---------------G---Y---TQYAIGGSMNP 195 (234)
Q Consensus 150 IS~n~f~~h~k~-------------~~~~vT~hhN~fa~~~~~R~P---------------~---~---~~y~ig~~~~a 195 (234)
||||+|++|+|+ ++++|||||||| +|+.+|+| + | ..|++++++++
T Consensus 243 ISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f-~~~~~R~Pr~R~G~~Hv~NN~~~n~~~~~~~~~ya~g~~~~~ 321 (416)
T 1vbl_A 243 ISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYY-KNVTQRLPRVRFGQVHIYNNYYEFSNLADYDFQYAWGVGVFS 321 (416)
T ss_dssp EESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEE-EEEEECSSEESSCEEEEESCEEEECTTSSSCCCCSEEEETTC
T ss_pred EEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEe-cCCccCCcccccceEEEEcceEECCCCCcccceeEeccCCCc
Confidence 999999999988 347899999999 79999999 1 2 24889999999
Q ss_pred eEEEEceeEeCCCC
Q 046181 196 SIKSQANLLIAPKV 209 (234)
Q Consensus 196 ~vlvE~NyF~~~~~ 209 (234)
++++|+|||++++.
T Consensus 322 ~i~~E~N~F~~~~~ 335 (416)
T 1vbl_A 322 QIYAQNNYFSFDWD 335 (416)
T ss_dssp EEEEESCEEEESSC
T ss_pred EEEEECCEEECCCC
Confidence 99999999998743
No 9
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=100.00 E-value=3.6e-40 Score=305.90 Aligned_cols=163 Identities=13% Similarity=0.049 Sum_probs=136.0
Q ss_pred ccccccccccCCCCCCCCCcEEEEEECCCCCC---CCCCCCceEEEeEEecCC---------------------------
Q 046181 44 QVATCSMSFSGKITDNVGKDIVHYKVTDPGDD---TINPKLGTLRYGATLIPQ--------------------------- 93 (234)
Q Consensus 44 ~lA~~a~Gfg~~tTGG~GG~v~~~~VTtl~D~---~~~~~pgtlr~~~~i~~~--------------------------- 93 (234)
.++++|+|||++||||++|++ |+|||++|| +..++|.+|+++++|...
T Consensus 2 ~~~~~a~Gfa~~tTGG~~g~~--~~Vtt~~dL~~al~~~~prvIvv~gti~~~~~~G~~t~~~c~~~~~~~~~~~~~~~~ 79 (359)
T 1idk_A 2 GVSGSAEGFAKGVTGGGSATP--VYPDTIDELVSYLGDDEARVIVLTKTFDFTDSEGTTTGTGCAPWGTASACQVAIDQD 79 (359)
T ss_dssp CCCSCCCGGGTTCCTTTTCCC--BCCCSHHHHHHHHHSSSCEEEEECSEEECTTTTCEEEEEEECTTCSSTTBCEEECGG
T ss_pred CCCCCCccccCCCCCCCCceE--EecCCHHHHHHHHcCCCceEEEECCEEEeccccCccccccccccccccccccccccc
Confidence 577899999999999999999 999999999 667899999999987421
Q ss_pred ----------------------cc----------------ee-----------EEEEEcCCccccC------CCCCeEEe
Q 046181 94 ----------------------KQ----------------CD-----------HLWAIHPPLLSEG------PKPYAIRL 118 (234)
Q Consensus 94 ----------------------~~----------------~i-----------~gi~I~~~g~i~~------~~~DaI~i 118 (234)
.+ .| +||+|| ++.++. +++|+|+|
T Consensus 80 ~w~~~~~~~~~~~~~t~~~~~~~~l~v~snkTI~G~G~~~~i~G~gl~i~~~a~NVIIr-nL~i~~~~~~~~~g~DaI~i 158 (359)
T 1idk_A 80 DWCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAIKGKGLRIVSGAENIIIQ-NIAVTDINPKYVWGGDAITL 158 (359)
T ss_dssp GHHHHHSCCSCEEEEEEESSTTSCEEECSSEEEEECTTTCEEESCCEEECTTCEEEEEE-SCEEEEECTTEETSCCSEEE
T ss_pred cccccccccCccccccccccccceEEeCCCceEEEecCCeEEecceEEEecCCCcEEEe-CeEEEcccccccccCCceee
Confidence 01 11 344444 444432 57899999
Q ss_pred eCCCcEEEEceeeccCCCCeeEe-eeCCccEEEeCceecCCc------------cc----CceeEEEEceEECCCCCCCC
Q 046181 119 VTTSKVWIDHNIRYECQDGLIDV-RRGSTDVTISNNWFRNQE------------KR----QNMKVIVVNNHFGPNRNQRL 181 (234)
Q Consensus 119 ~~s~nVWIDHcsfs~~~Dglldi-~~~s~~VTIS~n~f~~h~------------k~----~~~~vT~hhN~fa~~~~~R~ 181 (234)
++++|||||||+|+|..|++++. ++++++||||||+|++|. |. ..++|||||||| .++.+|+
T Consensus 159 ~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f-~~~~~R~ 237 (359)
T 1idk_A 159 DDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYI-YHTSGRS 237 (359)
T ss_dssp CSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEE-ESBCSCT
T ss_pred cCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccccCccccceEEEEecCCCeEEEceEe-ecCcccC
Confidence 99999999999999999999987 778999999999998654 33 236999999999 6999999
Q ss_pred C----------------CCCceeeecCCCCeEEEEceeEeCCCCC
Q 046181 182 P----------------GYTQYAIGGSMNPSIKSQANLLIAPKVG 210 (234)
Q Consensus 182 P----------------~~~~y~ig~~~~a~vlvE~NyF~~~~~p 210 (234)
| +|..|+++.++++++++|+|||++++.|
T Consensus 238 Pr~r~g~~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~p 282 (359)
T 1idk_A 238 PKVQDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNVDTV 282 (359)
T ss_dssp TEECTTCEEEEESCEEEEEEEEEEEECTTCEEEEESCEEEEEEEE
T ss_pred ccccCCceEEEECCEEecccceEEeccCCcEEEEEccEEECCCCc
Confidence 9 4567899999999999999999986554
No 10
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=100.00 E-value=6e-39 Score=297.62 Aligned_cols=165 Identities=16% Similarity=0.065 Sum_probs=133.3
Q ss_pred ccccccccccCCCCCCCCCcEEEEEECCCCCC---CCCCCCceEEEeEEecCC---------------------------
Q 046181 44 QVATCSMSFSGKITDNVGKDIVHYKVTDPGDD---TINPKLGTLRYGATLIPQ--------------------------- 93 (234)
Q Consensus 44 ~lA~~a~Gfg~~tTGG~GG~v~~~~VTtl~D~---~~~~~pgtlr~~~~i~~~--------------------------- 93 (234)
.++.+|||||++||||++|++ |+|||++|| +.+++|.+|++.++|.-.
T Consensus 2 ~~~~~a~Gfa~~tTGG~gg~~--v~Vtt~~~L~~al~~~~prvIvv~gtid~~g~~g~~~~~~c~~~~~~~~~~~~i~~~ 79 (359)
T 1qcx_A 2 GVVGAAEGFAHGVTGGGSASP--VYPTTTDELVSYLGDNEPRVIILDQTFDFTGTEGTETTTGCAPWGTASQCQVAINLH 79 (359)
T ss_dssp CCCSCCCGGGTTCCTTTTCCC--BCCCSHHHHHHHHHSSSCEEEEECSEEECTTTTCEEEEEEECTTCSSTTBCEEECGG
T ss_pred CcCCCcceeecCCcCCCCcce--EEeCCHHHHHHHHcCCCCeEEEECcEEeeccccccccccccccccccccccceeccc
Confidence 456799999999999999999 999999999 667899999977776310
Q ss_pred ---------cc-----------------------------ee--EEEEEc---C-----Ccccc------CCCCCeEEee
Q 046181 94 ---------KQ-----------------------------CD--HLWAIH---P-----PLLSE------GPKPYAIRLV 119 (234)
Q Consensus 94 ---------~~-----------------------------~i--~gi~I~---~-----~g~i~------~~~~DaI~i~ 119 (234)
.| .| .+|.|+ . ++.++ ..++|+|+|+
T Consensus 80 ~~~~~~~~~~p~~ti~~~~a~~~~i~v~snkTI~G~g~~~~I~G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~ 159 (359)
T 1qcx_A 80 SWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVD 159 (359)
T ss_dssp GHHHHHCTTSCEEEEEEEGGGTSCEECCSSEEEEECTTCCEEESCCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEE
T ss_pred ccccccccCCccceeeecccccceEEeCCCceEEecCCceEEecceEEEecCCCCEEEeCcEEEecCCcccccCceeEec
Confidence 00 11 234442 2 33332 1468999999
Q ss_pred CCCcEEEEceeeccCCCCee-EeeeCCccEEEeCceecCC------------ccc----CceeEEEEceEECCCCCCCCC
Q 046181 120 TTSKVWIDHNIRYECQDGLI-DVRRGSTDVTISNNWFRNQ------------EKR----QNMKVIVVNNHFGPNRNQRLP 182 (234)
Q Consensus 120 ~s~nVWIDHcsfs~~~Dgll-di~~~s~~VTIS~n~f~~h------------~k~----~~~~vT~hhN~fa~~~~~R~P 182 (234)
+++|||||||+|+|..|+++ +.++++++||||||+|+++ +|. ..+++||||||| .++.+|+|
T Consensus 160 ~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f-~~~~~R~P 238 (359)
T 1qcx_A 160 DSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYF-YNLSGRMP 238 (359)
T ss_dssp SCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCSSEEEEEESCEE-ESBCSCTT
T ss_pred CCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccccCcccccceeEEecCCCCeehcccEe-ccCcccCc
Confidence 99999999999999999998 5677899999999999853 233 346999999999 79999999
Q ss_pred ----------------CCCceeeecCCCCeEEEEceeEeCCCCCC
Q 046181 183 ----------------GYTQYAIGGSMNPSIKSQANLLIAPKVGN 211 (234)
Q Consensus 183 ----------------~~~~y~ig~~~~a~vlvE~NyF~~~~~p~ 211 (234)
+|..|+++.++++++++|+|||++++.|.
T Consensus 239 r~r~~~~~hv~NN~~~n~~~~a~~~~~~~~i~~e~N~F~~~~~~~ 283 (359)
T 1qcx_A 239 KVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNVVV 283 (359)
T ss_dssp EECSSEEEEEESCEEEEEEEEEEEECTTEEEEEESCEEEEEEEEE
T ss_pred eecCCceEEEEccEEECccCeEEecCCCceEEEEeeEEECCCccc
Confidence 45678999999999999999999887663
No 11
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=100.00 E-value=9.9e-38 Score=288.97 Aligned_cols=156 Identities=16% Similarity=0.160 Sum_probs=124.3
Q ss_pred ccccccC---CCCCCCCCcEEEEEECCCCCC---C-------------CCCCCceEEEeEEecC----------------
Q 046181 48 CSMSFSG---KITDNVGKDIVHYKVTDPGDD---T-------------INPKLGTLRYGATLIP---------------- 92 (234)
Q Consensus 48 ~a~Gfg~---~tTGG~GG~v~~~~VTtl~D~---~-------------~~~~pgtlr~~~~i~~---------------- 92 (234)
..+||+. +|+||. .+ ++|||+++| + ..++|.+|++.|+|..
T Consensus 3 ~~~G~at~~Ggt~gg~--~~--~tvtt~~~L~~al~~~~~~~~g~~~~~~~~p~vi~v~GtId~~~~~~~~~~~~~~~~~ 78 (353)
T 1air_A 3 DTGGYAATAGGNVTGA--VS--KTATSMQDIVNIIDAARLDANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKD 78 (353)
T ss_dssp BCSSSCBCCTTCSTTC--EE--EEESSHHHHHHHHHHTTBCTTSCBCTBCSSCEEEEECCCCHHHHHHHHTSGGGSTTSC
T ss_pred CCCcceecCCCCCCCc--ce--EEeCCHHHHHHHHHhhccccccccccCCCceEEEEEccEEeccccccccccccccccC
Confidence 4689975 566554 56 889999998 2 3688999999997521
Q ss_pred -C-------cc--------------ee-----EEEEEcCCcccc-----CCCCCeEEeeCCCcEEEEceeeccC------
Q 046181 93 -Q-------KQ--------------CD-----HLWAIHPPLLSE-----GPKPYAIRLVTTSKVWIDHNIRYEC------ 134 (234)
Q Consensus 93 -~-------~~--------------~i-----~gi~I~~~g~i~-----~~~~DaI~i~~s~nVWIDHcsfs~~------ 134 (234)
. .+ +| +||||| ++.++ ..++|+|+|++++|||||||+|+|.
T Consensus 79 ~~~~~i~~~~sn~TI~G~~~~~~g~gl~i~~~~NVIIr-nl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g 157 (353)
T 1air_A 79 PRGVEIKEFTKGITIIGANGSSANFGIWIKKSSDVVVQ-NMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDG 157 (353)
T ss_dssp CCEEEEESBCSCEEEEECTTCCBSSEEEEESCCSEEEE-SCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTT
T ss_pred CCceEEEecCCCEEEEeccCCCCCceEEEeccCcEEEe-ccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCccccc
Confidence 0 01 11 344444 33333 2468999999999999999999986
Q ss_pred -------CCCeeEeeeCCccEEEeCceecCCccc---------CceeEEEEceEECCCCCCCCC---------------C
Q 046181 135 -------QDGLIDVRRGSTDVTISNNWFRNQEKR---------QNMKVIVVNNHFGPNRNQRLP---------------G 183 (234)
Q Consensus 135 -------~Dglldi~~~s~~VTIS~n~f~~h~k~---------~~~~vT~hhN~fa~~~~~R~P---------------~ 183 (234)
+||++|+++++++||||||+|++|+|. ..++|||||||| +++.+|+| +
T Consensus 158 ~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~g~~vT~hhN~f-~~~~~R~Pr~r~G~~Hv~NN~~~n 236 (353)
T 1air_A 158 TPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDTGRNITYHHNYY-NDVNARLPLQRGGLVHAYNNLYTN 236 (353)
T ss_dssp CGGGCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTTCCCCEEEEESCEE-EEEEECSCEEESSEEEEESCEEEE
T ss_pred ccccccccccceeeecccCcEEEEeeEEcCCCceeEECCCcCCCCceEEEEceEE-cCCcCCCCCCcCceEEEEccEEEC
Confidence 399999999999999999999999988 125899999999 79999999 5
Q ss_pred CCceeeecCCCCeEEEEceeEeCCCC
Q 046181 184 YTQYAIGGSMNPSIKSQANLLIAPKV 209 (234)
Q Consensus 184 ~~~y~ig~~~~a~vlvE~NyF~~~~~ 209 (234)
|..|++++++++++++|+|||++++.
T Consensus 237 ~~~~~~~~~~~~~i~~e~N~F~~~~~ 262 (353)
T 1air_A 237 ITGSGLNVRQNGQALIENNWFEKAIN 262 (353)
T ss_dssp ESSCSEEEETTCEEEEESCEEEEEES
T ss_pred CCCceeccCCCcEEEEEceEEECCCC
Confidence 66789999999999999999998754
No 12
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=97.75 E-value=5.4e-05 Score=69.73 Aligned_cols=119 Identities=13% Similarity=-0.003 Sum_probs=76.2
Q ss_pred cccccccccC-CCCCC----CCCcEEEEEECCCCCCCCCCCCceEEEeEEecCCccee----EEEEE--------cCCcc
Q 046181 45 VATCSMSFSG-KITDN----VGKDIVHYKVTDPGDDTINPKLGTLRYGATLIPQKQCD----HLWAI--------HPPLL 107 (234)
Q Consensus 45 lA~~a~Gfg~-~tTGG----~GG~v~~~~VTtl~D~~~~~~pgtlr~~~~i~~~~~~i----~gi~I--------~~~g~ 107 (234)
|.++++||++ .+-|. .||+= =+|-...++. -||.++ .+.+|.+ .-|.+ ..+..
T Consensus 2 ~~~~~~G~As~~AeG~g~~ttGG~g--G~v~~VTtl~------dLr~al--~~~~PriIvv~G~I~~~~~~~l~v~snkT 71 (340)
T 3zsc_A 2 LNDKPVGFASVPTADLPEGTVGGLG--GEIVFVRTAE------ELEKYT--TAEGKYVIVVDGTIVFEPKREIKVLSDKT 71 (340)
T ss_dssp --CCCCSGGGCCCSSCTTSCCTTTT--SEEEEECSHH------HHHHHH--TSSSCEEEEEEEEEEEEEEEEEEECSSEE
T ss_pred CCCCCceeecccccccCCCCccCCC--ceEEEeCCHH------HHHHHH--hCCCCEEEEECcEEEeCCcceEEecCCCE
Confidence 4568999988 44433 34444 3333333321 155555 5666622 22222 23333
Q ss_pred cc--CCC---CCeEEeeCCCcEEEEceeeccCC-----------CCeeEeeeCCccEEEeCceecCCccc------Ccee
Q 046181 108 SE--GPK---PYAIRLVTTSKVWIDHNIRYECQ-----------DGLIDVRRGSTDVTISNNWFRNQEKR------QNMK 165 (234)
Q Consensus 108 i~--~~~---~DaI~i~~s~nVWIDHcsfs~~~-----------Dglldi~~~s~~VTIS~n~f~~h~k~------~~~~ 165 (234)
|. +.+ +++|.|.+++||+|-++.|.... +..|.+. ++++|.|-+|.|+...++ +...
T Consensus 72 I~G~ga~~I~G~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~-~s~nVWIDHcs~s~~~Dg~idi~~~s~~ 150 (340)
T 3zsc_A 72 IVGINDAKIVGGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVE-NSHHIWIDHITFVNGNDGAVDIKKYSNY 150 (340)
T ss_dssp EEEEEEEEEEEEEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEE-SCEEEEEESCEEESCSSCSEEEETTCEE
T ss_pred EEeccCcEEecCceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEe-cCCcEEEEeeeeccCCccceEEecCCce
Confidence 32 222 67999999999999999998752 2345664 589999999999987665 5689
Q ss_pred EEEEceEEC
Q 046181 166 VIVVNNHFG 174 (234)
Q Consensus 166 vT~hhN~fa 174 (234)
||+.+|+|.
T Consensus 151 vTISnn~f~ 159 (340)
T 3zsc_A 151 ITVSWNKFV 159 (340)
T ss_dssp EEEESCEEE
T ss_pred EEEECcEec
Confidence 999999994
No 13
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=97.43 E-value=0.00079 Score=66.28 Aligned_cols=84 Identities=15% Similarity=0.175 Sum_probs=61.1
Q ss_pred CeEEeeC------CCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCc-----cc-----CceeEEEEceEECCCC
Q 046181 114 YAIRLVT------TSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQE-----KR-----QNMKVIVVNNHFGPNR 177 (234)
Q Consensus 114 DaI~i~~------s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~-----k~-----~~~~vT~hhN~fa~~~ 177 (234)
|++.+++ ++||||++|.+....|..|.++ .+++|+|++|.+++.. -+ +..+|++.+|.| .++
T Consensus 169 DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIk-sseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i-~nt 246 (609)
T 3gq8_A 169 YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTH-HSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRS-KGC 246 (609)
T ss_dssp CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEEC-SCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEE-ESS
T ss_pred ccccCCCccccccceeEEEEeeEEEecCCCEEEec-CCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEE-ECC
Confidence 6777776 9999999999988788888985 5999999999995432 12 447999999999 555
Q ss_pred CCCCCCCCceeee----cCCCCeEEEEceeEe
Q 046181 178 NQRLPGYTQYAIG----GSMNPSIKSQANLLI 205 (234)
Q Consensus 178 ~~R~P~~~~y~ig----~~~~a~vlvE~NyF~ 205 (234)
.. + --|- +..-..|.+++|++.
T Consensus 247 ~~-----G-IrIKt~~~~~~v~NV~I~n~vs~ 272 (609)
T 3gq8_A 247 YG-----G-IEIKAHGDAPAAYNISINGHMSV 272 (609)
T ss_dssp SE-----E-EEEEECTTSCCCEEEEEEEEEEE
T ss_pred CC-----E-EEEEecCCCCccccEEEECCEee
Confidence 43 1 1111 223346888888664
No 14
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=97.41 E-value=0.001 Score=60.90 Aligned_cols=103 Identities=8% Similarity=0.050 Sum_probs=70.3
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeee-----CCccEEEeCceecC-Cccc------CceeEEEEceEECCCCC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRR-----GSTDVTISNNWFRN-QEKR------QNMKVIVVNNHFGPNRN 178 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~-----~s~~VTIS~n~f~~-h~k~------~~~~vT~hhN~fa~~~~ 178 (234)
...|||.+.+|+||+|.+|.|+.+ |..+.++. .+.+|+|++|.+.. |--. +-.+|++.+|.| .++.
T Consensus 199 ~NtDGid~~~s~nV~I~n~~i~~g-DDcIaiks~~~~~~s~nI~I~n~~~~~ghGisiGSe~~~v~nV~v~n~~~-~~t~ 276 (376)
T 1bhe_A 199 RNTDGIDPMSSKNITIAYSNIATG-DDNVAIKAYKGRAETRNISILHNDFGTGHGMSIGSETMGVYNVTVDDLKM-NGTT 276 (376)
T ss_dssp SSCCSEEEESCEEEEEESCEEECS-SCSEEEEECTTSCCEEEEEEEEEEECSSSCEEEEEEESSEEEEEEEEEEE-ESCS
T ss_pred CCCceEeecCCceEEEEeCEEecC-CCeEEEcccCCCCCceEEEEEeeEEEccccEEeccCCccEeeEEEEeeEE-eCCC
Confidence 458999999999999999999865 77789883 68999999999985 2111 345899999999 5543
Q ss_pred CCCC---CCCceeeecCCCCeEEEEceeEeCCCCCCCccccccc
Q 046181 179 QRLP---GYTQYAIGGSMNPSIKSQANLLIAPKVGNKKEQTFQV 219 (234)
Q Consensus 179 ~R~P---~~~~y~ig~~~~a~vlvE~NyF~~~~~p~~~~~~~~~ 219 (234)
. .- .|.. +++.-..+.+|+...++...|..-.+.|..
T Consensus 277 ~-GirIKt~~g---~~G~v~ni~f~ni~~~~v~~~i~i~~~y~~ 316 (376)
T 1bhe_A 277 N-GLRIKSDKS---AAGVVNGVRYSNVVMKNVAKPIVIDTVYEK 316 (376)
T ss_dssp E-EEEEECCTT---TCCEEEEEEEEEEEEESCSEEEEEETTSSC
T ss_pred c-EEEEEEecC---CCceEeeEEEEeEEEeCCCceEEEEeeccC
Confidence 2 10 1100 011113577888888887766543344533
No 15
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=97.26 E-value=0.00054 Score=68.95 Aligned_cols=85 Identities=15% Similarity=0.177 Sum_probs=61.7
Q ss_pred CeEEeeC------CCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCc-----cc-----CceeEEEEceEECCCC
Q 046181 114 YAIRLVT------TSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQE-----KR-----QNMKVIVVNNHFGPNR 177 (234)
Q Consensus 114 DaI~i~~------s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~-----k~-----~~~~vT~hhN~fa~~~ 177 (234)
|++.+++ ++||||++|.++...|..|.++ .+++|+|++|.+++.. -+ +..+|++.+|.| .++
T Consensus 169 DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIk-sSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~-~nT 246 (772)
T 3gqn_A 169 YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTH-HSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRS-KGC 246 (772)
T ss_dssp CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEEC-SCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEE-ESS
T ss_pred CcCCCcCcccccccceEEEEeeEEEecCcCeEEec-CCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEE-ECC
Confidence 6777776 9999999999988888889985 5999999999995432 12 447999999999 555
Q ss_pred CCCCCCCCceee----ecCCCCeEEEEceeEeC
Q 046181 178 NQRLPGYTQYAI----GGSMNPSIKSQANLLIA 206 (234)
Q Consensus 178 ~~R~P~~~~y~i----g~~~~a~vlvE~NyF~~ 206 (234)
.. + --| .+..-..|.+++|+...
T Consensus 247 ~n-----G-IRIKt~~~gg~v~NV~I~gnis~~ 273 (772)
T 3gqn_A 247 YG-----G-IEIKAHGDAPAAYNISINGHMSVE 273 (772)
T ss_dssp SE-----E-EEECCCTTSCCCEEEEEEEEEEES
T ss_pred Cc-----E-EEEEEeCCCCccccEEEECCEEec
Confidence 43 1 111 12233467888888763
No 16
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=96.90 E-value=0.0024 Score=60.44 Aligned_cols=65 Identities=17% Similarity=0.189 Sum_probs=52.8
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeC-----------CccEEEeCcee--c-CCcc--------cCceeEEE
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRG-----------STDVTISNNWF--R-NQEK--------RQNMKVIV 168 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~-----------s~~VTIS~n~f--~-~h~k--------~~~~~vT~ 168 (234)
...|||.+..|+||.|++|.|.. .|..+.++.+ +.+|+|++|.+ . +|.- ++-.+|++
T Consensus 236 ~NtDGidi~~s~nV~I~n~~i~~-gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v 314 (448)
T 3jur_A 236 PNNDGIDPESCKYMLIEKCRFDT-GDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVA 314 (448)
T ss_dssp TTCCSBCCBSCEEEEEESCEEEE-SSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEE
T ss_pred CCCccccccCCcCEEEEeeEEEe-CCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEE
Confidence 56899999999999999999997 5888999876 78999999999 3 3411 13368999
Q ss_pred EceEECCCC
Q 046181 169 VNNHFGPNR 177 (234)
Q Consensus 169 hhN~fa~~~ 177 (234)
.++.| .++
T Consensus 315 ~n~~~-~~t 322 (448)
T 3jur_A 315 RNNVY-MNV 322 (448)
T ss_dssp ESCEE-ESC
T ss_pred EEEEE-ecc
Confidence 99999 544
No 17
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=96.84 E-value=0.01 Score=53.82 Aligned_cols=91 Identities=15% Similarity=0.150 Sum_probs=63.6
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCccc------------CceeEEEEceEECCCCC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEKR------------QNMKVIVVNNHFGPNRN 178 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k~------------~~~~vT~hhN~fa~~~~ 178 (234)
...|||.+..++||+|.+|.++.+ |..+.++. +.+|+|++|.+.... + .-.+|++.++.| .++.
T Consensus 156 ~ntDGid~~~s~nV~I~n~~i~~g-DDcIaiks-g~nI~i~n~~~~~gh-GisiGS~g~~~~~~v~nV~v~n~~~-~~t~ 231 (339)
T 1ia5_A 156 HNTDAFDIGTSTYVTISGATVYNQ-DDCVAVNS-GENIYFSGGYCSGGH-GLSIGSVGGRSDNTVKNVTFVDSTI-INSD 231 (339)
T ss_dssp CSCCSEEEESCEEEEEESCEEECS-SCSEEESS-EEEEEEESCEEESSS-CEEEEEECSSSCCEEEEEEEEEEEE-ESCS
T ss_pred CCCCcEEecCCceEEEEeeEEEcC-CCeEEEeC-CeEEEEEeEEEECCc-eEEECcCCcccCCCEEEEEEEeeEE-ECCC
Confidence 458999999999999999999865 66788875 589999999998621 2 235899999999 5532
Q ss_pred CCCCCCCceeee---cC--CCCeEEEEceeEeCCCC-CC
Q 046181 179 QRLPGYTQYAIG---GS--MNPSIKSQANLLIAPKV-GN 211 (234)
Q Consensus 179 ~R~P~~~~y~ig---~~--~~a~vlvE~NyF~~~~~-p~ 211 (234)
. + -.|- ++ .-..|.+|+...++... |.
T Consensus 232 ~--g----irIKt~~g~~G~v~nI~~~ni~~~~v~~~~i 264 (339)
T 1ia5_A 232 N--G----VRIKTNIDTTGSVSDVTYKDITLTSIAKYGI 264 (339)
T ss_dssp E--E----EEEEEETTCCCEEEEEEEEEEEEEEESSEEE
T ss_pred c--E----EEEEEeCCCCcEEEeeEEEEEEEECcccccE
Confidence 1 2 1111 11 12357777777777665 53
No 18
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=96.84 E-value=0.01 Score=53.72 Aligned_cols=92 Identities=14% Similarity=0.130 Sum_probs=64.7
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCccc------------CceeEEEEceEECCCCC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEKR------------QNMKVIVVNNHFGPNRN 178 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k~------------~~~~vT~hhN~fa~~~~ 178 (234)
...|||.+..++||+|.+|.++.+ |..+.++. +.+|+|++|.+.... + .-.+|++.++.| .++.
T Consensus 152 ~ntDGid~~~s~nV~I~n~~i~~g-DDciaiks-g~nI~i~n~~~~~gh-GisiGSlg~~~~~~v~nV~v~n~~~-~~~~ 227 (339)
T 2iq7_A 152 HNTDAFDVGSSTGVYISGANVKNQ-DDCLAINS-GTNITFTGGTCSGGH-GLSIGSVGGRSDNTVKTVTISNSKI-VNSD 227 (339)
T ss_dssp CSCCSEEEESCEEEEEESCEEECS-SCSEEESS-EEEEEEESCEEESSC-CEEEEEESSSSCCEEEEEEEEEEEE-ESCS
T ss_pred CCCCcEEEcCcceEEEEecEEecC-CCEEEEcC-CccEEEEeEEEECCc-eEEECcCCcccCCCEEEEEEEeeEE-ECCC
Confidence 458999999999999999999876 66688875 589999999998621 2 235899999999 5542
Q ss_pred CCCCCCCceeee---cC--CCCeEEEEceeEeCCCC-CCC
Q 046181 179 QRLPGYTQYAIG---GS--MNPSIKSQANLLIAPKV-GNK 212 (234)
Q Consensus 179 ~R~P~~~~y~ig---~~--~~a~vlvE~NyF~~~~~-p~~ 212 (234)
. + --|- ++ .-..|.+|+...++... |..
T Consensus 228 ~--g----irIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~ 261 (339)
T 2iq7_A 228 N--G----VRIKTVSGATGSVSGVTYSGITLSNIAKYGIV 261 (339)
T ss_dssp E--E----EEEEEETTCCCEEEEEEEEEEEEEEESSEEEE
T ss_pred c--E----EEEEEeCCCCeEEEEEEEEeEEccCcccccEE
Confidence 2 1 1111 11 12357777777777665 543
No 19
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=96.67 E-value=0.0085 Score=58.52 Aligned_cols=92 Identities=15% Similarity=0.073 Sum_probs=64.3
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeC----------CccEEEeCceecCCccc---------CceeEEEEce
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRG----------STDVTISNNWFRNQEKR---------QNMKVIVVNN 171 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~----------s~~VTIS~n~f~~h~k~---------~~~~vT~hhN 171 (234)
...|||.+.+|+||+|++|.+..+ |..+.++.+ +.+|+|++|.+..-.-. +-.+|++.+|
T Consensus 378 ~NtDGidi~~s~nV~I~n~~i~~g-DD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~ 456 (608)
T 2uvf_A 378 NNGDGIEFGNSQNVMVFNNFFDTG-DDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENN 456 (608)
T ss_dssp TTCCSEEEESCEEEEEESCEEECS-SCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESC
T ss_pred CCCCeEEecCCceEEEEeeEEecC-CceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeE
Confidence 358999999999999999999865 778888754 68999999999863211 2258999999
Q ss_pred EECCCCCCCCCCCCceeee---cCCC--CeEEEEceeEeCC-CCC
Q 046181 172 HFGPNRNQRLPGYTQYAIG---GSMN--PSIKSQANLLIAP-KVG 210 (234)
Q Consensus 172 ~fa~~~~~R~P~~~~y~ig---~~~~--a~vlvE~NyF~~~-~~p 210 (234)
.| .++.. .-.|. ++.+ ..|.+|++..++. ..|
T Consensus 457 ~~-~~t~~------GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~ 494 (608)
T 2uvf_A 457 VM-YLTDI------GLRAKSTSTIGGGARNVTFRNNAMRDLAKQV 494 (608)
T ss_dssp EE-ESCSE------EEEEEEETTTCCEEEEEEEEEEEEEEESSEE
T ss_pred EE-ECCCc------eEEEeeecCCCceEECcEEEeeEEEcccccc
Confidence 99 55421 11111 1111 3567777777766 344
No 20
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=96.59 E-value=0.014 Score=52.77 Aligned_cols=93 Identities=11% Similarity=0.065 Sum_probs=63.6
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCccc-----------CceeEEEEceEECCCCCC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEKR-----------QNMKVIVVNNHFGPNRNQ 179 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k~-----------~~~~vT~hhN~fa~~~~~ 179 (234)
...|||.+..++||.|.+|.+..+ |..+.++. +.+|+|++|.+....-- .-.+|++.++.| .++..
T Consensus 151 ~ntDGidi~~s~nV~I~n~~i~~g-DDciaiks-g~nI~i~n~~~~~ghGisiGS~g~~~~~~v~nV~v~n~~~-~~t~~ 227 (336)
T 1nhc_A 151 HNTDGFDISESTGVYISGATVKNQ-DDCIAINS-GESISFTGGTCSGGHGLSIGSVGGRDDNTVKNVTISDSTV-SNSAN 227 (336)
T ss_dssp CSCCSEEECSCEEEEEESCEEESS-SEEEEESS-EEEEEEESCEEESSSEEEEEEESSSSCCEEEEEEEEEEEE-ESCSE
T ss_pred CCCCcEEecCCCeEEEEeCEEEcC-CCEEEEeC-CeEEEEEeEEEECCcCceEccCccccCCCEEEEEEEeeEE-ECCCc
Confidence 458999999999999999999876 66788865 58999999999862100 235889999999 55321
Q ss_pred CCCCCCceeee---cC--CCCeEEEEceeEeCCCC-CCC
Q 046181 180 RLPGYTQYAIG---GS--MNPSIKSQANLLIAPKV-GNK 212 (234)
Q Consensus 180 R~P~~~~y~ig---~~--~~a~vlvE~NyF~~~~~-p~~ 212 (234)
+ --|- ++ .-..|.+|+...++... |..
T Consensus 228 --g----irIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~ 260 (336)
T 1nhc_A 228 --G----VRIKTIYKETGDVSEITYSNIQLSGITDYGIV 260 (336)
T ss_dssp --E----EEEEEETTCCCEEEEEEEEEEEEEEESSEEEE
T ss_pred --E----EEEEEECCCCCEEeeeEEeeEEeeccccccEE
Confidence 1 1111 11 12356777777777665 543
No 21
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=96.50 E-value=0.0089 Score=55.88 Aligned_cols=63 Identities=10% Similarity=0.096 Sum_probs=51.1
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCccc----------CceeEEEEceEECCCC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEKR----------QNMKVIVVNNHFGPNR 177 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k~----------~~~~vT~hhN~fa~~~ 177 (234)
...|||.+.. +||+|.+|.+..+ |..|.++.++.+|+|++|.+.... + .-.+|++.++.| .++
T Consensus 174 ~ntDGidi~~-~nV~I~n~~i~~g-DD~Iai~s~~~nI~I~n~~~~~~~-GisIGS~g~~~~v~nV~v~n~~~-~~~ 246 (422)
T 1rmg_A 174 GGLDGIDVWG-SNIWVHDVEVTNK-DECVTVKSPANNILVESIYCNWSG-GCAMGSLGADTDVTDIVYRNVYT-WSS 246 (422)
T ss_dssp TTCCSEEEEE-EEEEEEEEEEESS-SEEEEEEEEEEEEEEEEEEEESSS-EEEEEEECTTEEEEEEEEEEEEE-ESS
T ss_pred CCCccEeecC-CeEEEEeeEEeCC-CCeEEeCCCCcCEEEEeEEEcCCc-ceeecccCCCCcEEEEEEEeEEE-ecc
Confidence 3589999999 9999999999755 777899888999999999987532 2 235789999999 554
No 22
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=96.41 E-value=0.015 Score=53.32 Aligned_cols=61 Identities=20% Similarity=0.226 Sum_probs=48.6
Q ss_pred CCeEEeeCCCcEEEEceeeccCC----------------------CCeeEeeeCCccEEEeCceecCCccc------Cce
Q 046181 113 PYAIRLVTTSKVWIDHNIRYECQ----------------------DGLIDVRRGSTDVTISNNWFRNQEKR------QNM 164 (234)
Q Consensus 113 ~DaI~i~~s~nVWIDHcsfs~~~----------------------Dglldi~~~s~~VTIS~n~f~~h~k~------~~~ 164 (234)
+-+|.|..++||+|.++.|.... +..|.+. ++++|.|.+|.|+...++ +..
T Consensus 105 G~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~-~s~nVwIDHcs~s~~~Dg~id~~~~s~ 183 (346)
T 1pxz_A 105 GPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMR-NVTNAWIDHNSLSDCSDGLIDVTLGST 183 (346)
T ss_dssp SCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEE-SCEEEEEESCEEECCSSEEEEEESSCE
T ss_pred cceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEe-cCceEEEEeeEEecCCCCcEeeccCcc
Confidence 35799999999999999997531 2245664 689999999999976554 667
Q ss_pred eEEEEceEEC
Q 046181 165 KVIVVNNHFG 174 (234)
Q Consensus 165 ~vT~hhN~fa 174 (234)
+||+.+|+|.
T Consensus 184 ~vTISnn~f~ 193 (346)
T 1pxz_A 184 GITISNNHFF 193 (346)
T ss_dssp EEEEESCEEE
T ss_pred eEEEEeeEEe
Confidence 9999999994
No 23
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=96.21 E-value=0.015 Score=53.00 Aligned_cols=62 Identities=23% Similarity=0.214 Sum_probs=48.0
Q ss_pred CCeEEeeCCCcEEEEceeeccCC---CCeeEeeeCCccEEEeCceecC-----C----ccc------CceeEEEEceEEC
Q 046181 113 PYAIRLVTTSKVWIDHNIRYECQ---DGLIDVRRGSTDVTISNNWFRN-----Q----EKR------QNMKVIVVNNHFG 174 (234)
Q Consensus 113 ~DaI~i~~s~nVWIDHcsfs~~~---Dglldi~~~s~~VTIS~n~f~~-----h----~k~------~~~~vT~hhN~fa 174 (234)
+.+|.|..++||+|-++.|.... +..|.+...+++|.|-+|.|+. + .++ +...||+.+|+|.
T Consensus 94 G~gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~ 173 (326)
T 3vmv_A 94 GIGIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFE 173 (326)
T ss_dssp SCCEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEE
T ss_pred CcEEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEe
Confidence 56788889999999999999752 2346776458999999999962 1 121 5689999999993
No 24
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=96.14 E-value=0.032 Score=51.09 Aligned_cols=43 Identities=12% Similarity=-0.002 Sum_probs=25.1
Q ss_pred CCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC
Q 046181 113 PYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN 157 (234)
Q Consensus 113 ~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~ 157 (234)
.|||.+..++||+|.+|.+..+ |..+.++. +.+|+|++|.+..
T Consensus 179 tDGidi~~s~nV~I~n~~i~~g-DDcIaiks-g~nI~i~n~~~~~ 221 (362)
T 1czf_A 179 TDAFDVGNSVGVNIIKPWVHNQ-DDCLAVNS-GENIWFTGGTCIG 221 (362)
T ss_dssp CCSEEECSCEEEEEESCEEECS-SCSEEESS-EEEEEEESCEEES
T ss_pred CCceeecCcceEEEEeeEEecC-CCEEEEeC-CeEEEEEEEEEeC
Confidence 5666666666666666666543 44455543 3566666666654
No 25
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=96.10 E-value=0.027 Score=51.24 Aligned_cols=61 Identities=18% Similarity=0.122 Sum_probs=48.0
Q ss_pred CCeEEee-CCCcEEEEceeeccCC----CCeeEeee----CCccEEEeCceecCCc-----------cc------CceeE
Q 046181 113 PYAIRLV-TTSKVWIDHNIRYECQ----DGLIDVRR----GSTDVTISNNWFRNQE-----------KR------QNMKV 166 (234)
Q Consensus 113 ~DaI~i~-~s~nVWIDHcsfs~~~----Dglldi~~----~s~~VTIS~n~f~~h~-----------k~------~~~~v 166 (234)
+-+|.|. +++||+|-+..|.... ...|.+.. .+++|.|-+|.|+... .+ +..+|
T Consensus 85 g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~V 164 (330)
T 2qy1_A 85 NFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHV 164 (330)
T ss_dssp SSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEE
T ss_pred eeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceE
Confidence 5689999 8999999999999763 23467764 6999999999995311 11 56799
Q ss_pred EEEceEE
Q 046181 167 IVVNNHF 173 (234)
Q Consensus 167 T~hhN~f 173 (234)
|+.+|+|
T Consensus 165 TISnn~f 171 (330)
T 2qy1_A 165 TVSYNYV 171 (330)
T ss_dssp EEESCEE
T ss_pred EEEccee
Confidence 9999999
No 26
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=96.05 E-value=0.04 Score=49.28 Aligned_cols=46 Identities=15% Similarity=0.157 Sum_probs=24.3
Q ss_pred CCCCeEEeeCCCcEEEEceeecc-CCCCeeEeeeCCccEEEeCceecC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYE-CQDGLIDVRRGSTDVTISNNWFRN 157 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~-~~Dglldi~~~s~~VTIS~n~f~~ 157 (234)
...|+|.+..++++-|.+|.+.. ..|| +++..++++++|++|.+.+
T Consensus 170 ~~~dGI~~~~s~~~~i~~N~~~~~~~~G-I~~~~~s~~v~I~nN~i~~ 216 (377)
T 2pyg_A 170 NGLDGFVADYLVDSVFENNVAYANDRHG-FNVVTSTHDFVMTNNVAYG 216 (377)
T ss_dssp CSSCSEEEESEEEEEEESCEEESCSSCS-EEEETTCEEEEEESCEEES
T ss_pred CCCCceeEeccCCcEEECcEEEccccCc-EEEEeccCCeEEECCEEEC
Confidence 44566666666666666663322 2333 4444445666666666654
No 27
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=96.05 E-value=0.037 Score=50.97 Aligned_cols=61 Identities=11% Similarity=0.039 Sum_probs=46.0
Q ss_pred CCeEEeeCCCcEEEEceeeccCCC---------------CeeEeeeCCccEEEeCceecCC-----------------cc
Q 046181 113 PYAIRLVTTSKVWIDHNIRYECQD---------------GLIDVRRGSTDVTISNNWFRNQ-----------------EK 160 (234)
Q Consensus 113 ~DaI~i~~s~nVWIDHcsfs~~~D---------------glldi~~~s~~VTIS~n~f~~h-----------------~k 160 (234)
+-+|.|.+++||+|-+..|....| ..|.+ .++++|.|-+|.|+.. ..
T Consensus 95 g~gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i-~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~D 173 (355)
T 1pcl_A 95 NGSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVI-DNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHD 173 (355)
T ss_pred cCEEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEe-cCCCcEEEEeeEEeccccCccccccccCccccccc
Confidence 457888889999999999985421 24666 4688999999988752 11
Q ss_pred c------CceeEEEEceEEC
Q 046181 161 R------QNMKVIVVNNHFG 174 (234)
Q Consensus 161 ~------~~~~vT~hhN~fa 174 (234)
+ +...||+.+|+|.
T Consensus 174 gl~Di~~~s~~VTiS~n~f~ 193 (355)
T 1pcl_A 174 GALDIKKGSDYVTISYSRFE 193 (355)
T ss_pred cceeeecCCCcEEEEeeEEc
Confidence 1 5679999999994
No 28
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=96.03 E-value=0.023 Score=53.09 Aligned_cols=72 Identities=14% Similarity=0.163 Sum_probs=51.9
Q ss_pred EEEEEcCCccccCCCCCeEEeeCCCcEEEEceeecc----CCCCeeEeeeCCccEEEeCceecCCccc-----CceeEEE
Q 046181 98 HLWAIHPPLLSEGPKPYAIRLVTTSKVWIDHNIRYE----CQDGLIDVRRGSTDVTISNNWFRNQEKR-----QNMKVIV 168 (234)
Q Consensus 98 ~gi~I~~~g~i~~~~~DaI~i~~s~nVWIDHcsfs~----~~Dglldi~~~s~~VTIS~n~f~~h~k~-----~~~~vT~ 168 (234)
.|+.|+ +..++.++..+|.++.++||-|++|++.. ..|| +|+.. ++|+|.+|.|...+.+ +..+|++
T Consensus 136 ~nv~I~-~iti~nsp~~~i~i~~~~nv~I~n~~I~~~d~~ntDG-idi~~--~nV~I~n~~i~~gDD~Iai~s~~~nI~I 211 (422)
T 1rmg_A 136 THFSVH-DIILVDAPAFHFTMDTCSDGEVYNMAIRGGNEGGLDG-IDVWG--SNIWVHDVEVTNKDECVTVKSPANNILV 211 (422)
T ss_dssp EEEEEE-EEEEECCSSCSEEEEEEEEEEEEEEEEECCSSTTCCS-EEEEE--EEEEEEEEEEESSSEEEEEEEEEEEEEE
T ss_pred ceEEEE-CeEEECCCceEEEEeCcCCEEEEeEEEECCCCCCCcc-EeecC--CeEEEEeeEEeCCCCeEEeCCCCcCEEE
Confidence 344444 33344556678888889999999999876 3556 67765 8899999998876555 3567888
Q ss_pred EceEE
Q 046181 169 VNNHF 173 (234)
Q Consensus 169 hhN~f 173 (234)
.++++
T Consensus 212 ~n~~~ 216 (422)
T 1rmg_A 212 ESIYC 216 (422)
T ss_dssp EEEEE
T ss_pred EeEEE
Confidence 88887
No 29
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=95.99 E-value=0.037 Score=50.37 Aligned_cols=89 Identities=16% Similarity=0.164 Sum_probs=62.9
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC-Ccc----------cCceeEEEEceEECCCCCC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN-QEK----------RQNMKVIVVNNHFGPNRNQ 179 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~-h~k----------~~~~~vT~hhN~fa~~~~~ 179 (234)
...|||.+..++||+|.+|.+..+ |..+.++. +.+|+|++|.+.. |-- +.-.+|++.++.| .++..
T Consensus 164 ~NtDGid~~~s~nV~I~n~~i~~g-DDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~~~~~v~nV~v~n~~~-~~~~~ 240 (349)
T 1hg8_A 164 HNTDGFDISSSDHVTLDNNHVYNQ-DDCVAVTS-GTNIVVSNMYCSGGHGLSIGSVGGKSDNVVDGVQFLSSQV-VNSQN 240 (349)
T ss_dssp CSCCSEEEESCEEEEEEEEEEECS-SCSEEESS-EEEEEEEEEEEESSCCEEEEEESSSSCCEEEEEEEEEEEE-EEEEE
T ss_pred CCCCeEEEccccEEEEEeeEEecC-CCeEEeeC-CeEEEEEeEEEeCCcceEEccccccccCCEEEEEEEEEEE-ECCCc
Confidence 458999999999999999999854 77789976 5999999999985 211 1234899999999 44321
Q ss_pred CCCCCCceeeecC-----CCCeEEEEceeEeCCC
Q 046181 180 RLPGYTQYAIGGS-----MNPSIKSQANLLIAPK 208 (234)
Q Consensus 180 R~P~~~~y~ig~~-----~~a~vlvE~NyF~~~~ 208 (234)
+ . -|-.. .-..|.+|+...++..
T Consensus 241 --G---i-rIKt~~g~~G~v~nI~~~ni~~~~v~ 268 (349)
T 1hg8_A 241 --G---C-RIKSNSGATGTINNVTYQNIALTNIS 268 (349)
T ss_dssp --E---E-EEEEETTCCEEEEEEEEEEEEEEEEE
T ss_pred --E---E-EEEecCCCCccccceEEEEEEEEccc
Confidence 1 1 11111 1235778888877765
No 30
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=95.89 E-value=0.046 Score=50.33 Aligned_cols=61 Identities=16% Similarity=0.121 Sum_probs=47.0
Q ss_pred CCeEEee-CCCcEEEEceeeccCC------CCeeEeeeCCccEEEeCceecCCccc-------CceeEEEEceEEC
Q 046181 113 PYAIRLV-TTSKVWIDHNIRYECQ------DGLIDVRRGSTDVTISNNWFRNQEKR-------QNMKVIVVNNHFG 174 (234)
Q Consensus 113 ~DaI~i~-~s~nVWIDHcsfs~~~------Dglldi~~~s~~VTIS~n~f~~h~k~-------~~~~vT~hhN~fa 174 (234)
+.+|.|. +++||+|-++.|.... +..|.+. ++++|.|.+|.|+.-.+. +..+||+.+|+|.
T Consensus 123 G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~-~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~ 197 (359)
T 1qcx_A 123 GKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVD-DSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLID 197 (359)
T ss_dssp SCCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEE-SCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEE
T ss_pred cceEEEecCCCCEEEeCcEEEecCCcccccCceeEec-CCceEEEEeeEeeccCcCceeecccccccEEEECcEec
Confidence 5678998 8999999999998642 1335665 589999999998752221 5679999999993
No 31
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=95.86 E-value=0.031 Score=52.57 Aligned_cols=61 Identities=18% Similarity=0.153 Sum_probs=46.9
Q ss_pred CCeEEeeCCCcEEEEceeeccCCC-------------------CeeEeeeCCccEEEeCceecCC---------------
Q 046181 113 PYAIRLVTTSKVWIDHNIRYECQD-------------------GLIDVRRGSTDVTISNNWFRNQ--------------- 158 (234)
Q Consensus 113 ~DaI~i~~s~nVWIDHcsfs~~~D-------------------glldi~~~s~~VTIS~n~f~~h--------------- 158 (234)
+-+|.|.+++||+|-+..|....| ..|.+ .++++|.|-+|.|+..
T Consensus 147 g~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i-~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~ 225 (416)
T 1vbl_A 147 GGGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISI-EGSSHIWIDHNTFTDGDHPDRSLGTYFGRPF 225 (416)
T ss_dssp SCEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEE-ESCEEEEEESCEEECTTCCGGGSCEETTEEC
T ss_pred cCEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEe-cCCceEEEEccEEecCCCcccccccccCcce
Confidence 567888899999999999975422 24566 4689999999999852
Q ss_pred --ccc------CceeEEEEceEEC
Q 046181 159 --EKR------QNMKVIVVNNHFG 174 (234)
Q Consensus 159 --~k~------~~~~vT~hhN~fa 174 (234)
..+ +...||+.+|+|.
T Consensus 226 ~~~DGl~Di~~~s~~VTISnn~f~ 249 (416)
T 1vbl_A 226 QQHDGALDIKNSSDFITISYNVFT 249 (416)
T ss_dssp CCCCCSEEEESSCEEEEEESCEEE
T ss_pred eecccceeeecCCCcEEEEeeEEc
Confidence 121 5679999999994
No 32
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=95.84 E-value=0.089 Score=48.01 Aligned_cols=99 Identities=12% Similarity=0.143 Sum_probs=70.1
Q ss_pred EEEEcCCccccCCCCCeEEeeCCCcEEEEceeeccC-----CCCeeEeeeCCccEEEeCceecCCccc----------Cc
Q 046181 99 LWAIHPPLLSEGPKPYAIRLVTTSKVWIDHNIRYEC-----QDGLIDVRRGSTDVTISNNWFRNQEKR----------QN 163 (234)
Q Consensus 99 gi~I~~~g~i~~~~~DaI~i~~s~nVWIDHcsfs~~-----~Dglldi~~~s~~VTIS~n~f~~h~k~----------~~ 163 (234)
++.|+ +..++.++.-.+.+.++++|.|+++++... .|| +|+. .+++|+|++|.|...+++ ..
T Consensus 161 nv~I~-~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDG-id~~-~s~nV~I~n~~i~~gDDcIaiks~~~~~~s 237 (376)
T 1bhe_A 161 NFTLY-NVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDG-IDPM-SSKNITIAYSNIATGDDNVAIKAYKGRAET 237 (376)
T ss_dssp EEEEE-EEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCS-EEEE-SCEEEEEESCEEECSSCSEEEEECTTSCCE
T ss_pred EEEEE-eEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCce-Eeec-CCceEEEEeCEEecCCCeEEEcccCCCCCc
Confidence 44443 233344556789999999999999998763 566 6875 599999999999976554 35
Q ss_pred eeEEEEceEECCCCCCCCCCCCceeeecC--CCCeEEEEceeEeCCC
Q 046181 164 MKVIVVNNHFGPNRNQRLPGYTQYAIGGS--MNPSIKSQANLLIAPK 208 (234)
Q Consensus 164 ~~vT~hhN~fa~~~~~R~P~~~~y~ig~~--~~a~vlvE~NyF~~~~ 208 (234)
.+|++.+|+|. .. ..-.||+- .-..|.+++|+|.+..
T Consensus 238 ~nI~I~n~~~~-~g-------hGisiGSe~~~v~nV~v~n~~~~~t~ 276 (376)
T 1bhe_A 238 RNISILHNDFG-TG-------HGMSIGSETMGVYNVTVDDLKMNGTT 276 (376)
T ss_dssp EEEEEEEEEEC-SS-------SCEEEEEEESSEEEEEEEEEEEESCS
T ss_pred eEEEEEeeEEE-cc-------ccEEeccCCccEeeEEEEeeEEeCCC
Confidence 68999999993 21 12345432 2246899999999864
No 33
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=95.76 E-value=0.024 Score=57.15 Aligned_cols=75 Identities=13% Similarity=0.015 Sum_probs=54.0
Q ss_pred EEEEEcCCccccCCCCCeEEeeCCCcEEEEceeeccCC----CCeeEeeeCCccEEEeCceecCCccc----------Cc
Q 046181 98 HLWAIHPPLLSEGPKPYAIRLVTTSKVWIDHNIRYECQ----DGLIDVRRGSTDVTISNNWFRNQEKR----------QN 163 (234)
Q Consensus 98 ~gi~I~~~g~i~~~~~DaI~i~~s~nVWIDHcsfs~~~----Dglldi~~~s~~VTIS~n~f~~h~k~----------~~ 163 (234)
.||.|+ +-.++..++|+|.|.+++||+|.+|.+.... ..-+.+..++.+|||++|.|.+...+ ..
T Consensus 183 ~NV~I~-Nc~I~ntGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~~~gg~v 261 (772)
T 3gqn_A 183 ENIWIE-NCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHGDAPAA 261 (772)
T ss_dssp EEEEEE-SCEEESCSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSEEEEECCCTTSCCC
T ss_pred ceEEEE-eeEEEecCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCcEEEEEEeCCCCcc
Confidence 445555 2233455789999999999999999995432 34577777779999999999985544 33
Q ss_pred eeEEEEceEE
Q 046181 164 MKVIVVNNHF 173 (234)
Q Consensus 164 ~~vT~hhN~f 173 (234)
.+|.+.+|+.
T Consensus 262 ~NV~I~gnis 271 (772)
T 3gqn_A 262 YNISINGHMS 271 (772)
T ss_dssp EEEEEEEEEE
T ss_pred ccEEEECCEE
Confidence 5677776655
No 34
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=95.69 E-value=0.14 Score=50.02 Aligned_cols=101 Identities=18% Similarity=0.194 Sum_probs=73.0
Q ss_pred EEEEEcCCccccCCCCCeEEeeCCCcEEEEceeecc----CCCCeeEeeeCCccEEEeCceecCCccc-----C------
Q 046181 98 HLWAIHPPLLSEGPKPYAIRLVTTSKVWIDHNIRYE----CQDGLIDVRRGSTDVTISNNWFRNQEKR-----Q------ 162 (234)
Q Consensus 98 ~gi~I~~~g~i~~~~~DaI~i~~s~nVWIDHcsfs~----~~Dglldi~~~s~~VTIS~n~f~~h~k~-----~------ 162 (234)
.++.|+ +..++.++.-+|.+.+++||.|+++.+.. -.|| +|+. .+++|+|++|.|...++. +
T Consensus 340 ~nv~I~-giti~ns~~~~i~~~~~~nv~i~~v~i~~~~~~NtDG-idi~-~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~ 416 (608)
T 2uvf_A 340 ENVYLA-GFTVRNPAFHGIMNLENHNVVANGLIHQTYDANNGDG-IEFG-NSQNVMVFNNFFDTGDDCINFAAGTGEKAQ 416 (608)
T ss_dssp EEEEEE-SCEEECCSSCSEEEESCEEEEEESCEEECTTCTTCCS-EEEE-SCEEEEEESCEEECSSCSEEEECCCSGGGG
T ss_pred eeEEEe-CcEEecCCCCEEEEecCCCEEEeeEEEcCCCCCCCCe-EEec-CCceEEEEeeEEecCCceEEecCCcCcccc
Confidence 566666 34455666788999999999999999864 2555 7885 589999999999876544 1
Q ss_pred ----ceeEEEEceEECCCCCCCCCCCCceeeecCCC---CeEEEEceeEeCCC
Q 046181 163 ----NMKVIVVNNHFGPNRNQRLPGYTQYAIGGSMN---PSIKSQANLLIAPK 208 (234)
Q Consensus 163 ----~~~vT~hhN~fa~~~~~R~P~~~~y~ig~~~~---a~vlvE~NyF~~~~ 208 (234)
..+|++.+|++ .+.+ +...+|+.+. ..|.+++|+|....
T Consensus 417 ~~~~s~nI~I~n~~~-~~gh------g~~~iGS~~~~~v~nI~v~n~~~~~t~ 462 (608)
T 2uvf_A 417 EQEPMKGAWLFNNYF-RMGH------GAIVTGSHTGAWIEDILAENNVMYLTD 462 (608)
T ss_dssp GSCCEEEEEEESCEE-CSSS------CSEEEESCCTTCEEEEEEESCEEESCS
T ss_pred ccccccCEEEEeEEE-eCCC------CeEEEcccCCCCEEEEEEEeEEEECCC
Confidence 36899999999 3322 2334555332 25899999999864
No 35
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=95.68 E-value=0.054 Score=49.03 Aligned_cols=101 Identities=15% Similarity=0.077 Sum_probs=71.9
Q ss_pred EEEEEcCCccccCCCCCeEEeeCCCcEEEEceeeccC---------CCCeeEeeeCCccEEEeCceecCCccc----Cce
Q 046181 98 HLWAIHPPLLSEGPKPYAIRLVTTSKVWIDHNIRYEC---------QDGLIDVRRGSTDVTISNNWFRNQEKR----QNM 164 (234)
Q Consensus 98 ~gi~I~~~g~i~~~~~DaI~i~~s~nVWIDHcsfs~~---------~Dglldi~~~s~~VTIS~n~f~~h~k~----~~~ 164 (234)
.++.|+ ++.++.++..+|.+..++||.|+++++... .|| +|+. .+++|+|++|.|...++. ...
T Consensus 113 ~nv~i~-~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDG-id~~-~s~nV~I~n~~i~~gDDcIaiksg~ 189 (339)
T 1ia5_A 113 TNSVIS-GLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDA-FDIG-TSTYVTISGATVYNQDDCVAVNSGE 189 (339)
T ss_dssp EEEEEE-SCEEECCSSCCEEEESCEEEEEESCEEECGGGTTTTCCSCCS-EEEE-SCEEEEEESCEEECSSCSEEESSEE
T ss_pred CcEEEE-EEEEEcCCcceEEEecccCeEEeeEEEECCccccccCCCCCc-EEec-CCceEEEEeeEEEcCCCeEEEeCCe
Confidence 455555 455566677899999999999999998753 556 6875 489999999999876665 457
Q ss_pred eEEEEceEECCCCCCCCCCCCceeeec-CC-----CCeEEEEceeEeCCCC
Q 046181 165 KVIVVNNHFGPNRNQRLPGYTQYAIGG-SM-----NPSIKSQANLLIAPKV 209 (234)
Q Consensus 165 ~vT~hhN~fa~~~~~R~P~~~~y~ig~-~~-----~a~vlvE~NyF~~~~~ 209 (234)
+|++.++++ .+. ..-.||+ ++ -..|.++++.|.+...
T Consensus 190 nI~i~n~~~-~~g-------hGisiGS~g~~~~~~v~nV~v~n~~~~~t~~ 232 (339)
T 1ia5_A 190 NIYFSGGYC-SGG-------HGLSIGSVGGRSDNTVKNVTFVDSTIINSDN 232 (339)
T ss_dssp EEEEESCEE-ESS-------SCEEEEEECSSSCCEEEEEEEEEEEEESCSE
T ss_pred EEEEEeEEE-ECC-------ceEEECcCCcccCCCEEEEEEEeeEEECCCc
Confidence 899999988 321 1234544 11 1258899999988653
No 36
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=95.67 E-value=0.053 Score=49.99 Aligned_cols=60 Identities=17% Similarity=0.143 Sum_probs=47.2
Q ss_pred CCeEEee-CCCcEEEEceeeccC-------CCCeeEeeeCCccEEEeCceecCCc-------ccCceeEEEEceEEC
Q 046181 113 PYAIRLV-TTSKVWIDHNIRYEC-------QDGLIDVRRGSTDVTISNNWFRNQE-------KRQNMKVIVVNNHFG 174 (234)
Q Consensus 113 ~DaI~i~-~s~nVWIDHcsfs~~-------~Dglldi~~~s~~VTIS~n~f~~h~-------k~~~~~vT~hhN~fa 174 (234)
+.+|.|. +++||+|-++.|... .|+ |.+. ++++|.|-+|.|+... +.+..+||+.+|+|.
T Consensus 123 G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~Da-I~i~-~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~ 197 (359)
T 1idk_A 123 GKGLRIVSGAENIIIQNIAVTDINPKYVWGGDA-ITLD-DCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYID 197 (359)
T ss_dssp SCCEEECTTCEEEEEESCEEEEECTTEETSCCS-EEEC-SCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEE
T ss_pred cceEEEecCCCcEEEeCeEEEcccccccccCCc-eeec-CCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEec
Confidence 5678998 899999999999863 354 5664 5999999999988522 225679999999994
No 37
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=95.67 E-value=0.033 Score=54.87 Aligned_cols=75 Identities=13% Similarity=0.015 Sum_probs=54.0
Q ss_pred EEEEEcCCccccCCCCCeEEeeCCCcEEEEceeeccCC----CCeeEeeeCCccEEEeCceecCCccc----------Cc
Q 046181 98 HLWAIHPPLLSEGPKPYAIRLVTTSKVWIDHNIRYECQ----DGLIDVRRGSTDVTISNNWFRNQEKR----------QN 163 (234)
Q Consensus 98 ~gi~I~~~g~i~~~~~DaI~i~~s~nVWIDHcsfs~~~----Dglldi~~~s~~VTIS~n~f~~h~k~----------~~ 163 (234)
.+|.|+ +-.++..++|+|.|.+++||+|.+|.+.... ..-+.+..++.+|||++|.|.+...+ ..
T Consensus 183 ~NV~I~-Nc~I~~tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~~~~~v 261 (609)
T 3gq8_A 183 ENIWIE-NCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHGDAPAA 261 (609)
T ss_dssp EEEEEE-SCEEESCSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEECTTSCCC
T ss_pred eeEEEE-eeEEEecCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEecCCCCcc
Confidence 445554 2233456789999999999999999995432 34577777779999999999985544 33
Q ss_pred eeEEEEceEE
Q 046181 164 MKVIVVNNHF 173 (234)
Q Consensus 164 ~~vT~hhN~f 173 (234)
.+|.+.+|++
T Consensus 262 ~NV~I~n~vs 271 (609)
T 3gq8_A 262 YNISINGHMS 271 (609)
T ss_dssp EEEEEEEEEE
T ss_pred ccEEEECCEe
Confidence 4677777655
No 38
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=95.56 E-value=0.037 Score=50.06 Aligned_cols=100 Identities=16% Similarity=0.149 Sum_probs=67.9
Q ss_pred EEEEEcCCccccCCCCCeEEeeCCCcEEEEceeeccC---------CCCeeEeeeCCccEEEeCceecCCccc----Cce
Q 046181 98 HLWAIHPPLLSEGPKPYAIRLVTTSKVWIDHNIRYEC---------QDGLIDVRRGSTDVTISNNWFRNQEKR----QNM 164 (234)
Q Consensus 98 ~gi~I~~~g~i~~~~~DaI~i~~s~nVWIDHcsfs~~---------~Dglldi~~~s~~VTIS~n~f~~h~k~----~~~ 164 (234)
.++.|+ ++.++.++..+|.+..++||.|+++++... .|| +|+. .+++|+|++|.|...++. ...
T Consensus 109 ~nv~i~-giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDG-id~~-~s~nV~I~n~~i~~gDDciaiksg~ 185 (339)
T 2iq7_A 109 KSSNIK-GLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDA-FDVG-SSTGVYISGANVKNQDDCLAINSGT 185 (339)
T ss_dssp EEEEEE-CCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTTCCSCCS-EEEE-SCEEEEEESCEEECSSCSEEESSEE
T ss_pred CcEEEE-EEEEEeCCcceEEEeccCCEEEEEEEEECCccccccCCCCCc-EEEc-CcceEEEEecEEecCCCEEEEcCCc
Confidence 455554 344556667888888899999999888753 455 6775 488899999998876555 447
Q ss_pred eEEEEceEECCCCCCCCCCCCceeeec-CC-----CCeEEEEceeEeCCC
Q 046181 165 KVIVVNNHFGPNRNQRLPGYTQYAIGG-SM-----NPSIKSQANLLIAPK 208 (234)
Q Consensus 165 ~vT~hhN~fa~~~~~R~P~~~~y~ig~-~~-----~a~vlvE~NyF~~~~ 208 (234)
+|++.+|.+ ... ...+||+ ++ -..|.++++.|.+..
T Consensus 186 nI~i~n~~~-~~g-------hGisiGSlg~~~~~~v~nV~v~n~~~~~~~ 227 (339)
T 2iq7_A 186 NITFTGGTC-SGG-------HGLSIGSVGGRSDNTVKTVTISNSKIVNSD 227 (339)
T ss_dssp EEEEESCEE-ESS-------CCEEEEEESSSSCCEEEEEEEEEEEEESCS
T ss_pred cEEEEeEEE-ECC-------ceEEECcCCcccCCCEEEEEEEeeEEECCC
Confidence 888888888 321 1244544 11 125788888887754
No 39
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=95.49 E-value=0.079 Score=50.01 Aligned_cols=102 Identities=16% Similarity=0.173 Sum_probs=68.3
Q ss_pred EEEEEcCCccccCCCCCeEEeeCCCcEEEEceeecc---CCCCeeEeeeCCccEEEeCceecCCccc-----C-------
Q 046181 98 HLWAIHPPLLSEGPKPYAIRLVTTSKVWIDHNIRYE---CQDGLIDVRRGSTDVTISNNWFRNQEKR-----Q------- 162 (234)
Q Consensus 98 ~gi~I~~~g~i~~~~~DaI~i~~s~nVWIDHcsfs~---~~Dglldi~~~s~~VTIS~n~f~~h~k~-----~------- 162 (234)
.|+.|+ +..++.++.-.|.+..++||.|+++++.. -.|| +|+. .+++|+|++|.|...+++ +
T Consensus 199 ~nv~i~-giti~nsp~~~i~~~~~~nv~i~~v~I~~~~~NtDG-idi~-~s~nV~I~n~~i~~gDDcIaiksg~~~dg~~ 275 (448)
T 3jur_A 199 RNVLVE-GVKIINSPMWCIHPVLSENVIIRNIEISSTGPNNDG-IDPE-SCKYMLIEKCRFDTGDDSVVIKSGRDADGRR 275 (448)
T ss_dssp EEEEEE-SCEEESCSSCSEEEESCEEEEEESCEEEECSTTCCS-BCCB-SCEEEEEESCEEEESSEEEEEBCCCHHHHHH
T ss_pred cceEEE-eeEEEeCCCceEeeeccCCEEEEeEEEeeccCCCcc-cccc-CCcCEEEEeeEEEeCCCcEEeccCccccccc
Confidence 566665 34445566778999999999999999986 3666 5775 489999999999875543 2
Q ss_pred ----ceeEEEEceEECCCCCCCCCCCCceeeecCCC---CeEEEEceeEeCC
Q 046181 163 ----NMKVIVVNNHFGPNRNQRLPGYTQYAIGGSMN---PSIKSQANLLIAP 207 (234)
Q Consensus 163 ----~~~vT~hhN~fa~~~~~R~P~~~~y~ig~~~~---a~vlvE~NyF~~~ 207 (234)
..+|++.++++ .+..+ .+.-.||+.+. ..|.+++++|...
T Consensus 276 ~~~ps~nI~I~n~~~-~~~~g----h~gisiGS~~~~~v~nV~v~n~~~~~t 322 (448)
T 3jur_A 276 IGVPSEYILVRDNLV-ISQAS----HGGLVIGSEMSGGVRNVVARNNVYMNV 322 (448)
T ss_dssp HCCCEEEEEEESCEE-ECSSC----SEEEEECSSCTTCEEEEEEESCEEESC
T ss_pred cCCCceeEEEEEeEE-ecCCC----cceEEECCcccCcEEEEEEEEEEEecc
Confidence 46899999988 22111 01223333221 3566777777544
No 40
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=95.33 E-value=0.066 Score=48.34 Aligned_cols=100 Identities=15% Similarity=0.139 Sum_probs=68.5
Q ss_pred EEEEEcCCccccCCCCCeEEeeCCCcEEEEceeeccC---------CCCeeEeeeCCccEEEeCceecCCccc----Cce
Q 046181 98 HLWAIHPPLLSEGPKPYAIRLVTTSKVWIDHNIRYEC---------QDGLIDVRRGSTDVTISNNWFRNQEKR----QNM 164 (234)
Q Consensus 98 ~gi~I~~~g~i~~~~~DaI~i~~s~nVWIDHcsfs~~---------~Dglldi~~~s~~VTIS~n~f~~h~k~----~~~ 164 (234)
.++.|+ ++.++.++.-+|.+. ++||.|+++++... .|| +|+. .+++|+|++|.|...++. ...
T Consensus 109 ~nv~i~-~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDG-idi~-~s~nV~I~n~~i~~gDDciaiksg~ 184 (336)
T 1nhc_A 109 EDSTFK-GINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDG-FDIS-ESTGVYISGATVKNQDDCIAINSGE 184 (336)
T ss_dssp EEEEEE-SCEEECCSSCCEEEE-EEEEEEESCEEECTTHHHHTCCSCCS-EEEC-SCEEEEEESCEEESSSEEEEESSEE
T ss_pred CcEEEE-EEEEEeCCccEEEEE-eCCEEEEEEEEECCCcccccCCCCCc-EEec-CCCeEEEEeCEEEcCCCEEEEeCCe
Confidence 445554 344455566789999 99999999998763 566 7875 488999999999876655 447
Q ss_pred eEEEEceEECCCCCCCCCCCCceeeec-CC-----CCeEEEEceeEeCCCC
Q 046181 165 KVIVVNNHFGPNRNQRLPGYTQYAIGG-SM-----NPSIKSQANLLIAPKV 209 (234)
Q Consensus 165 ~vT~hhN~fa~~~~~R~P~~~~y~ig~-~~-----~a~vlvE~NyF~~~~~ 209 (234)
+|++.+|++ ... ....||+ ++ -..|.++++.|.+...
T Consensus 185 nI~i~n~~~-~~g-------hGisiGS~g~~~~~~v~nV~v~n~~~~~t~~ 227 (336)
T 1nhc_A 185 SISFTGGTC-SGG-------HGLSIGSVGGRDDNTVKNVTISDSTVSNSAN 227 (336)
T ss_dssp EEEEESCEE-ESS-------SEEEEEEESSSSCCEEEEEEEEEEEEESCSE
T ss_pred EEEEEeEEE-ECC-------cCceEccCccccCCCEEEEEEEeeEEECCCc
Confidence 888888888 321 1245544 11 1258888998887543
No 41
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=95.26 E-value=0.061 Score=50.31 Aligned_cols=60 Identities=15% Similarity=0.152 Sum_probs=45.1
Q ss_pred CCeEEeeCCCcEEEEceeeccCCC-------------------CeeEeeeCCccEEEeCceecCC---------------
Q 046181 113 PYAIRLVTTSKVWIDHNIRYECQD-------------------GLIDVRRGSTDVTISNNWFRNQ--------------- 158 (234)
Q Consensus 113 ~DaI~i~~s~nVWIDHcsfs~~~D-------------------glldi~~~s~~VTIS~n~f~~h--------------- 158 (234)
+-+|.|.. +||+|-+..|....| ..|.+ .++++|.|-+|.|+..
T Consensus 142 g~gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i-~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~ 219 (399)
T 2o04_A 142 GGNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITI-NGGTHIWIDHCTFNDGSRPDSTSPKYYGRKY 219 (399)
T ss_dssp SCEEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEE-ESCEEEEEESCEEECTTCCGGGSCEETTEEC
T ss_pred eCEEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEe-cCCCcEEEEeeeeecCCCcccccccccccee
Confidence 45677777 999999999975422 24566 4689999999999842
Q ss_pred --ccc------CceeEEEEceEEC
Q 046181 159 --EKR------QNMKVIVVNNHFG 174 (234)
Q Consensus 159 --~k~------~~~~vT~hhN~fa 174 (234)
..+ +...||+.+|+|.
T Consensus 220 ~~~Dgl~Di~~~s~~VTISnn~f~ 243 (399)
T 2o04_A 220 QHHDGQTDASNGANYITMSYNYYH 243 (399)
T ss_dssp CCCCCSEEEETTCEEEEEESCEEE
T ss_pred eccccceeeeccCCcEEEEeeEEc
Confidence 111 5679999999994
No 42
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=95.24 E-value=0.076 Score=49.03 Aligned_cols=62 Identities=15% Similarity=0.103 Sum_probs=47.7
Q ss_pred CCeEEe---eCCCcEEEEceeeccCCC---------------CeeEeeeCCccEEEeCceecCC----------------
Q 046181 113 PYAIRL---VTTSKVWIDHNIRYECQD---------------GLIDVRRGSTDVTISNNWFRNQ---------------- 158 (234)
Q Consensus 113 ~DaI~i---~~s~nVWIDHcsfs~~~D---------------glldi~~~s~~VTIS~n~f~~h---------------- 158 (234)
+-+|.| .+++||+|-+..|....| ..|.+..++++|.|-+|.|+..
T Consensus 102 g~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~ 181 (361)
T 1pe9_A 102 NGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYV 181 (361)
T ss_dssp SSEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECC
T ss_pred cCEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCccee
Confidence 568899 789999999999985421 2467754499999999999852
Q ss_pred -ccc------CceeEEEEceEEC
Q 046181 159 -EKR------QNMKVIVVNNHFG 174 (234)
Q Consensus 159 -~k~------~~~~vT~hhN~fa 174 (234)
.++ +...||+.+|+|.
T Consensus 182 ~~DgllDi~~~s~~VTiS~n~f~ 204 (361)
T 1pe9_A 182 QHDGALDIKRGSDYVTISNSLID 204 (361)
T ss_dssp CCCCSEEECTTCEEEEEESCEEE
T ss_pred eccceeeeecCCCcEEEEeeEEc
Confidence 121 5689999999994
No 43
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=95.06 E-value=0.089 Score=47.80 Aligned_cols=45 Identities=7% Similarity=0.104 Sum_probs=23.5
Q ss_pred CCCeEEeeCCCcEEEEceeeccCCCCeeEee-------eCCccEEEeCceecCC
Q 046181 112 KPYAIRLVTTSKVWIDHNIRYECQDGLIDVR-------RGSTDVTISNNWFRNQ 158 (234)
Q Consensus 112 ~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~-------~~s~~VTIS~n~f~~h 158 (234)
++|+|.|..++||+|.+|.+..+. | |.+. ....+|+|++|.|.+.
T Consensus 187 gDDcIaiksg~nI~i~n~~~~~gh-G-isiGS~G~~~~~~v~nV~v~n~~~~~~ 238 (349)
T 1hg8_A 187 QDDCVAVTSGTNIVVSNMYCSGGH-G-LSIGSVGGKSDNVVDGVQFLSSQVVNS 238 (349)
T ss_dssp SSCSEEESSEEEEEEEEEEEESSC-C-EEEEEESSSSCCEEEEEEEEEEEEEEE
T ss_pred CCCeEEeeCCeEEEEEeEEEeCCc-c-eEEccccccccCCEEEEEEEEEEEECC
Confidence 355666665566666666665443 3 3431 1134566666666553
No 44
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=94.85 E-value=0.13 Score=47.22 Aligned_cols=60 Identities=20% Similarity=0.129 Sum_probs=47.1
Q ss_pred CCeEEeeCCCcEEEEceeeccC------CCCeeEeeeCCccEEEeCceecCCc-------------cc------CceeEE
Q 046181 113 PYAIRLVTTSKVWIDHNIRYEC------QDGLIDVRRGSTDVTISNNWFRNQE-------------KR------QNMKVI 167 (234)
Q Consensus 113 ~DaI~i~~s~nVWIDHcsfs~~------~Dglldi~~~s~~VTIS~n~f~~h~-------------k~------~~~~vT 167 (234)
+-+|.|.+++||+|-+..|... .|. |.+. ++++|.|-+|.|+... .+ +..+||
T Consensus 102 g~gl~i~~~~NVIIrnl~i~~~~~~~~~~Da-I~i~-~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VT 179 (353)
T 1air_A 102 NFGIWIKKSSDVVVQNMRIGYLPGGAKDGDM-IRVD-DSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVT 179 (353)
T ss_dssp SSEEEEESCCSEEEESCEEESCSCGGGTCCS-EEEE-SCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEE
T ss_pred CceEEEeccCcEEEeccEEEeCCCCCCCCCe-EEee-CCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEE
Confidence 5688999999999999999853 344 6775 6899999999997421 11 567999
Q ss_pred EEceEEC
Q 046181 168 VVNNHFG 174 (234)
Q Consensus 168 ~hhN~fa 174 (234)
+.+|+|.
T Consensus 180 ISnn~f~ 186 (353)
T 1air_A 180 VSYNYIH 186 (353)
T ss_dssp EESCEEE
T ss_pred EEeeEEc
Confidence 9999994
No 45
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=93.85 E-value=0.079 Score=48.00 Aligned_cols=64 Identities=17% Similarity=0.274 Sum_probs=50.6
Q ss_pred CCCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC-Ccc--------cCceeEEEEceEECCCC
Q 046181 110 GPKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN-QEK--------RQNMKVIVVNNHFGPNR 177 (234)
Q Consensus 110 ~~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~-h~k--------~~~~~vT~hhN~fa~~~ 177 (234)
....|||.+ .++||+|.+|.++.+ |..+.++.+ .+|+|++|.+.. |-- +.-.+|++.++.| .++
T Consensus 149 ~~NtDGidi-~s~nV~I~n~~i~~g-DDcIaiksg-~nI~i~n~~~~~ghGisIGS~g~~~~v~nV~v~n~~~-~~t 221 (335)
T 1k5c_A 149 GHNTDGFDV-SANNVTIQNCIVKNQ-DDCIAINDG-NNIRFENNQCSGGHGISIGSIATGKHVSNVVIKGNTV-TRS 221 (335)
T ss_dssp CCSCCSEEE-ECSSEEEESCEEESS-SCSEEEEEE-EEEEEESCEEESSCCEEEEEECTTCEEEEEEEESCEE-EEE
T ss_pred CCCCCeEcc-cCCeEEEEeeEEEcC-CCEEEeeCC-eeEEEEEEEEECCccCeEeeccCCCCEEEEEEEeeEE-ECC
Confidence 346899999 999999999999865 778999874 899999999986 311 1234789999988 443
No 46
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=93.24 E-value=0.091 Score=47.61 Aligned_cols=65 Identities=25% Similarity=0.267 Sum_probs=46.8
Q ss_pred ccccCCCCCeEEeeCCCc-EEEEceeeccC----------CCCeeEeeeCCccEEEeCceecCCccc----CceeEEEEc
Q 046181 106 LLSEGPKPYAIRLVTTSK-VWIDHNIRYEC----------QDGLIDVRRGSTDVTISNNWFRNQEKR----QNMKVIVVN 170 (234)
Q Consensus 106 g~i~~~~~DaI~i~~s~n-VWIDHcsfs~~----------~Dglldi~~~s~~VTIS~n~f~~h~k~----~~~~vT~hh 170 (234)
+.++.++...|.+..++| |.|+++++... .|| +|+ .+++|+|++|.|...++. ...+|++.+
T Consensus 112 iti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDG-idi--~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n 188 (335)
T 1k5c_A 112 FEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDG-FDV--SANNVTIQNCIVKNQDDCIAINDGNNIRFEN 188 (335)
T ss_dssp CEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCS-EEE--ECSSEEEESCEEESSSCSEEEEEEEEEEEES
T ss_pred EEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccCCCCCe-Ecc--cCCeEEEEeeEEEcCCCEEEeeCCeeEEEEE
Confidence 444455667788888888 88888887652 344 677 488888888888876655 336788888
Q ss_pred eEE
Q 046181 171 NHF 173 (234)
Q Consensus 171 N~f 173 (234)
+++
T Consensus 189 ~~~ 191 (335)
T 1k5c_A 189 NQC 191 (335)
T ss_dssp CEE
T ss_pred EEE
Confidence 887
No 47
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=92.92 E-value=0.09 Score=48.14 Aligned_cols=67 Identities=16% Similarity=0.191 Sum_probs=54.3
Q ss_pred CccccCCCCCeEEeeCCCcEEEEceeeccC---------CCCeeEeeeCCccEEEeCceecCCccc----CceeEEEEce
Q 046181 105 PLLSEGPKPYAIRLVTTSKVWIDHNIRYEC---------QDGLIDVRRGSTDVTISNNWFRNQEKR----QNMKVIVVNN 171 (234)
Q Consensus 105 ~g~i~~~~~DaI~i~~s~nVWIDHcsfs~~---------~Dglldi~~~s~~VTIS~n~f~~h~k~----~~~~vT~hhN 171 (234)
+..++.++..+|.+. ++||.|+++++... .|| +|+. .+++|+|++|.|...++. ...+|++.++
T Consensus 141 ~iti~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDG-idi~-~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~ 217 (362)
T 1czf_A 141 GLNIKNTPLMAFSVQ-ANDITFTDVTINNADGDTQGGHNTDA-FDVG-NSVGVNIIKPWVHNQDDCLAVNSGENIWFTGG 217 (362)
T ss_dssp SCEEECCSSCCEEEE-CSSEEEESCEEECGGGGTTTCCSCCS-EEEC-SCEEEEEESCEEECSSCSEEESSEEEEEEESC
T ss_pred EEEEecCCccEEEEe-eCCEEEEEEEEECCccccccCCCCCc-eeec-CcceEEEEeeEEecCCCEEEEeCCeEEEEEEE
Confidence 344556777889999 99999999999752 566 7885 589999999999987766 4478999999
Q ss_pred EEC
Q 046181 172 HFG 174 (234)
Q Consensus 172 ~fa 174 (234)
++.
T Consensus 218 ~~~ 220 (362)
T 1czf_A 218 TCI 220 (362)
T ss_dssp EEE
T ss_pred EEe
Confidence 983
No 48
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=92.77 E-value=0.83 Score=40.64 Aligned_cols=64 Identities=13% Similarity=0.072 Sum_probs=43.2
Q ss_pred cCCCCCeEEeeCC-CcEEEEceeeccCCCCeeEeeeCCccEEEeCce-ecCCccc-----CceeEEEEceEE
Q 046181 109 EGPKPYAIRLVTT-SKVWIDHNIRYECQDGLIDVRRGSTDVTISNNW-FRNQEKR-----QNMKVIVVNNHF 173 (234)
Q Consensus 109 ~~~~~DaI~i~~s-~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~-f~~h~k~-----~~~~vT~hhN~f 173 (234)
+....++|.+..+ .+++|+.|.+....+.-|.+. .+++++|++|. ++....+ +..++++.+|++
T Consensus 144 ~n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~-~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i 214 (377)
T 2pyg_A 144 REMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVAD-YLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVA 214 (377)
T ss_dssp ECCSSCSEEECSSEEEEEEESCEEESCSSCSEEEE-SEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEE
T ss_pred EecccceEEeecccCCeEEEeEEeecCCCCceeEe-ccCCcEEECcEEEccccCcEEEEeccCCeEEECCEE
Confidence 3455678888765 467888887765444445664 47888899994 4433333 367899999999
No 49
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=88.15 E-value=1.4 Score=42.22 Aligned_cols=82 Identities=13% Similarity=0.116 Sum_probs=43.5
Q ss_pred EEEEceeeccCCCCeeEeeeCCccEEEeCceecCCc-----cc---CceeEEEEceEECCCCCCCCCCCCceeeecCCCC
Q 046181 124 VWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQE-----KR---QNMKVIVVNNHFGPNRNQRLPGYTQYAIGGSMNP 195 (234)
Q Consensus 124 VWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~-----k~---~~~~vT~hhN~fa~~~~~R~P~~~~y~ig~~~~a 195 (234)
.-|.++.|... ++.|-..+ +++.+|+.|.|.+.. ++ -....++.+|+| .++..|+-.| .-++...+|.
T Consensus 254 n~i~~N~~~~~-~ggi~l~~-~~~s~I~~N~f~gN~~~~~~~Gi~i~~~~~~I~nN~f-~~~~g~~~~~-~~GI~i~~G~ 329 (506)
T 1dbg_A 254 NVYYGNTYLNC-QGTMNFRH-GDHQVAINNFYIGNDQRFGYGGMFVWGSRHVIACNYF-ELSETIKSRG-NAALYLNPGA 329 (506)
T ss_dssp CEEESCEEESC-SSEEEEEE-CSSCEEESCEEEECSSSSCBCCEEECSBSCEEESCEE-EESSBCGGGT-SEEEEECCBC
T ss_pred EEEECCEEEcc-cCcEEEee-cCccEEECCEEECCcCccCceEEEEECCCCEEECCEE-ECCcCccccc-cccEEEecCC
Confidence 34555555444 22333333 344466666665543 22 112238888888 5665543222 1144433333
Q ss_pred ---------eEEEEceeEeCCCC
Q 046181 196 ---------SIKSQANLLIAPKV 209 (234)
Q Consensus 196 ---------~vlvE~NyF~~~~~ 209 (234)
...+++|-|.+-..
T Consensus 330 ~~~~~~~~~~~~I~~Ntfi~n~~ 352 (506)
T 1dbg_A 330 MASEHALAFDMLIANNAFINVNG 352 (506)
T ss_dssp TTSTTCCCBSEEEESCEEESCSS
T ss_pred CccccccccCcEEECCEEECCcc
Confidence 78899999988775
No 50
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=87.87 E-value=1.9 Score=42.02 Aligned_cols=56 Identities=7% Similarity=0.019 Sum_probs=35.4
Q ss_pred CCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC-Cccc---------CceeEEEEceEE
Q 046181 113 PYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN-QEKR---------QNMKVIVVNNHF 173 (234)
Q Consensus 113 ~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~-h~k~---------~~~~vT~hhN~f 173 (234)
.|||.++ +||.|.+|.|..+-| +|.++ +.+|+|++|.+.. |.-+ .-.+|++.++.+
T Consensus 375 TDGIDi~--~NV~I~nc~I~~gDD-cIaIk--s~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i 440 (574)
T 1ogo_X 375 TDGPEIY--PNSVVHDVFWHVNDD-AIKIY--YSGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNV 440 (574)
T ss_dssp CCCCBCC--TTCEEEEEEEEESSC-SEECC--STTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEE
T ss_pred CccCccc--CCEEEEeeEEECCCC-EEEEC--CccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEE
Confidence 6777776 777777777777644 56664 3777777777642 2111 234667777766
No 51
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=83.76 E-value=1.7 Score=41.68 Aligned_cols=92 Identities=14% Similarity=0.064 Sum_probs=57.1
Q ss_pred CCeEEeeCCCcEEEEceeeccCCCCe-eEee-------eCCccEEEeCceecCCccc-----C---------------ce
Q 046181 113 PYAIRLVTTSKVWIDHNIRYECQDGL-IDVR-------RGSTDVTISNNWFRNQEKR-----Q---------------NM 164 (234)
Q Consensus 113 ~DaI~i~~s~nVWIDHcsfs~~~Dgl-ldi~-------~~s~~VTIS~n~f~~h~k~-----~---------------~~ 164 (234)
..++.++ ++++-|.+|.|....++. +-+. -.+++.+|.+|.|.+.... + ..
T Consensus 118 ~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~ 196 (506)
T 1dbg_A 118 PGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGM 196 (506)
T ss_dssp CCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCC
T ss_pred ccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEEECCcCcceEEecCceeEeccCcccccccC
Confidence 3466666 478889999999876651 1222 1346678999999874221 1 13
Q ss_pred eEEEEceEECCCCCCCCCCCCc----eeeecCCCCeEEEEceeEeCCC
Q 046181 165 KVIVVNNHFGPNRNQRLPGYTQ----YAIGGSMNPSIKSQANLLIAPK 208 (234)
Q Consensus 165 ~vT~hhN~fa~~~~~R~P~~~~----y~ig~~~~a~vlvE~NyF~~~~ 208 (234)
...++||+| .+.. -..... |+..........+|+|+|+...
T Consensus 197 ~~~I~nN~f-~~~~--~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~~ 241 (506)
T 1dbg_A 197 YHRVDHCFF-SNPQ--KPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQD 241 (506)
T ss_dssp CCEEESCEE-EECC--CSSSCCCSEEECSSTTCBCCCEEESCEEEEEC
T ss_pred CeEEeCcEE-cccc--cCCCccccEEEEEEecccCCcEEECCEEEecc
Confidence 678999999 4443 111122 3322223457899999999753
No 52
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=83.12 E-value=1.6 Score=40.99 Aligned_cols=95 Identities=9% Similarity=0.076 Sum_probs=63.7
Q ss_pred CCCCeEEeeCCCcEEEEceeecc-CCCCeeEeeeCCccEEEeCceecCCccc----C--ceeEEEEceEECCCCCCCCC-
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYE-CQDGLIDVRRGSTDVTISNNWFRNQEKR----Q--NMKVIVVNNHFGPNRNQRLP- 182 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~-~~Dglldi~~~s~~VTIS~n~f~~h~k~----~--~~~vT~hhN~fa~~~~~R~P- 182 (234)
.+|++|.++.+++.-|.++.+.+ +.|++ -+. .+++..|+.|.|++...+ . ..+.++..|.| .+. |.|
T Consensus 229 ~dG~gIyl~ns~~~~I~~N~i~~~~R~gI-h~m-~s~~~~i~~N~f~~~~~Gi~~M~s~~~~n~v~~N~f-~~~--~~g~ 303 (410)
T 2inu_A 229 PDGVTLLAENHEGLLVTGNNLFPRGRSLI-EFT-GCNRCSVTSNRLQGFYPGMLRLLNGCKENLITANHI-RRT--NEGY 303 (410)
T ss_dssp TTSEEEEEESEESCEEESCEECSCSSEEE-EEE-SCBSCEEESCEEEESSSCSEEEESSCBSCEEESCEE-EEE--CCCS
T ss_pred CCCCEEEEEeCCCCEEECCCcccCcceEE-EEE-ccCCCEEECCEEecceeEEEEEEcCCCCCEEECCEE-ecc--CCce
Confidence 45666888898888888887644 66664 433 478889999999876555 2 23678888999 333 334
Q ss_pred -------CCC--ceeeecCCCCeEEEEceeEeCCCCC
Q 046181 183 -------GYT--QYAIGGSMNPSIKSQANLLIAPKVG 210 (234)
Q Consensus 183 -------~~~--~y~ig~~~~a~vlvE~NyF~~~~~p 210 (234)
+|. .||+---.+....+++|.|...-.|
T Consensus 304 a~M~s~~~~~d~~~Gill~~~~~~~i~~N~i~~~~~~ 340 (410)
T 2inu_A 304 PPFIGRGNGLDDLYGVVHIAGDNNLISDNLFAYNVPP 340 (410)
T ss_dssp GGGTTCCCSCCTTSCSEEEESSSCEEEEEEEEEECCG
T ss_pred eeeeccCCCCCccEeeEEEeecCcEEECCEEEeecCc
Confidence 221 3566555566777888888765433
No 53
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=81.64 E-value=13 Score=34.93 Aligned_cols=93 Identities=11% Similarity=0.020 Sum_probs=56.4
Q ss_pred CCCeEEeeC-CCcEEEEceeeccCCCCe-eEeeeCCccEEEeCcee-cCCccc----CceeEEEEceEECCCCCCCCCCC
Q 046181 112 KPYAIRLVT-TSKVWIDHNIRYECQDGL-IDVRRGSTDVTISNNWF-RNQEKR----QNMKVIVVNNHFGPNRNQRLPGY 184 (234)
Q Consensus 112 ~~DaI~i~~-s~nVWIDHcsfs~~~Dgl-ldi~~~s~~VTIS~n~f-~~h~k~----~~~~vT~hhN~fa~~~~~R~P~~ 184 (234)
-+.+|.+.+ +...+|-.+.+....||. +-+. .++...|+.|.+ .+.-.+ ...+..+..|.| ++..-
T Consensus 205 ~GNgI~L~G~~~~~~I~~N~i~~~~dG~gIyl~-ns~~~~I~~N~i~~~~R~gIh~m~s~~~~i~~N~f-~~~~~----- 277 (410)
T 2inu_A 205 CGNCVELTGAGQATIVSGNHMGAGPDGVTLLAE-NHEGLLVTGNNLFPRGRSLIEFTGCNRCSVTSNRL-QGFYP----- 277 (410)
T ss_dssp SSEEEEECSCEESCEEESCEEECCTTSEEEEEE-SEESCEEESCEECSCSSEEEEEESCBSCEEESCEE-EESSS-----
T ss_pred cCCceeeccccccceEecceeeecCCCCEEEEE-eCCCCEEECCCcccCcceEEEEEccCCCEEECCEE-eccee-----
Confidence 467777777 666777777777777772 3343 477788888855 433322 334556677777 32211
Q ss_pred CceeeecCCCCeEEEEceeEeCCCCCCC
Q 046181 185 TQYAIGGSMNPSIKSQANLLIAPKVGNK 212 (234)
Q Consensus 185 ~~y~ig~~~~a~vlvE~NyF~~~~~p~~ 212 (234)
+..-+ .+.....++++|.|.....++.
T Consensus 278 Gi~~M-~s~~~~n~v~~N~f~~~~~g~a 304 (410)
T 2inu_A 278 GMLRL-LNGCKENLITANHIRRTNEGYP 304 (410)
T ss_dssp CSEEE-ESSCBSCEEESCEEEEECCCSG
T ss_pred EEEEE-EcCCCCCEEECCEEeccCCcee
Confidence 22122 2223578999999997776654
No 54
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=76.58 E-value=0.97 Score=44.07 Aligned_cols=61 Identities=10% Similarity=0.149 Sum_probs=37.6
Q ss_pred cCCCCCeEEeeCCCcE--EEEceeecc----CCCCeeEeeeCCccEEEeCceecCCccc---CceeEEEEceEE
Q 046181 109 EGPKPYAIRLVTTSKV--WIDHNIRYE----CQDGLIDVRRGSTDVTISNNWFRNQEKR---QNMKVIVVNNHF 173 (234)
Q Consensus 109 ~~~~~DaI~i~~s~nV--WIDHcsfs~----~~Dglldi~~~s~~VTIS~n~f~~h~k~---~~~~vT~hhN~f 173 (234)
+.++.-.|.+..++|| .|+.++... ..|| +|+. ++|+|++|.|...+++ +..+|++.++.+
T Consensus 343 ~NSp~w~i~~~~c~nV~~~I~nv~i~~~~~~nTDG-IDi~---~NV~I~nc~I~~gDDcIaIks~NI~I~nc~i 412 (574)
T 1ogo_X 343 NAPPFNTMDFNGNSGISSQISDYKQVGAFFFQTDG-PEIY---PNSVVHDVFWHVNDDAIKIYYSGASVSRATI 412 (574)
T ss_dssp ECCSSCSEEECSSSCEEEEEEEEEEECCCSTTCCC-CBCC---TTCEEEEEEEEESSCSEECCSTTCEEEEEEE
T ss_pred ECCCCcEEeecCCCChhhEEEeeEeeCCCCCCCcc-Cccc---CCEEEEeeEEECCCCEEEECCccEEEEeEEE
Confidence 3445556667777777 777776432 2555 5664 7777777777766555 335666666655
No 55
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=75.42 E-value=2.9 Score=38.66 Aligned_cols=46 Identities=9% Similarity=0.013 Sum_probs=31.7
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN 157 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~ 157 (234)
.+..||.+++ +++.|++|.|....+.-|.+...+.+.+|.+|.+++
T Consensus 127 ~g~~GI~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~ 172 (400)
T 1ru4_A 127 AGYQGAYVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYR 172 (400)
T ss_dssp CSSCSEEECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEEC
T ss_pred CCCCcEEEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEc
Confidence 3344788776 566788888888777556666555577777777765
No 56
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=73.17 E-value=1.8 Score=41.09 Aligned_cols=64 Identities=8% Similarity=-0.048 Sum_probs=45.0
Q ss_pred CCCeEEeeCCCcEEEEceeeccCCCCee-EeeeCCccEEEeCceecC-------Cc--------ccCceeEEEEceEECC
Q 046181 112 KPYAIRLVTTSKVWIDHNIRYECQDGLI-DVRRGSTDVTISNNWFRN-------QE--------KRQNMKVIVVNNHFGP 175 (234)
Q Consensus 112 ~~DaI~i~~s~nVWIDHcsfs~~~Dgll-di~~~s~~VTIS~n~f~~-------h~--------k~~~~~vT~hhN~fa~ 175 (234)
..|||.+ .++||+|.+|++....|+.- .....+.+|+|++|.|.+ .. .+.-.+|+|.++.+ .
T Consensus 166 NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~gg~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~-~ 243 (464)
T 1h80_A 166 ERNGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEGGIALRMETDNLLMKNYKQGGIRNIFADNIRC-S 243 (464)
T ss_dssp EETTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEESSEEEEEECCCHHHHHHTCCEEEEEEEEEEEE-E
T ss_pred cCCCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEECCCEEEEEeCCceeccCCCCcEEEEEEEeEEE-E
Confidence 3577777 78999999999998866432 223457899999999776 11 01235788999888 4
Q ss_pred CC
Q 046181 176 NR 177 (234)
Q Consensus 176 ~~ 177 (234)
+.
T Consensus 244 nv 245 (464)
T 1h80_A 244 KG 245 (464)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 57
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=70.77 E-value=1.8 Score=41.73 Aligned_cols=60 Identities=10% Similarity=0.058 Sum_probs=45.2
Q ss_pred CCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC-C--c--cc-----CceeEEEEceEECCCC
Q 046181 112 KPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN-Q--E--KR-----QNMKVIVVNNHFGPNR 177 (234)
Q Consensus 112 ~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~-h--~--k~-----~~~~vT~hhN~fa~~~ 177 (234)
..|||.+. +||-|.+|.|..+ |.+|.++. .+|+|++|.+.. | . +- .-.+|+|.++.+ .++
T Consensus 336 NTDGidi~--~nV~I~n~~i~~g-DDcIaIks--~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i-~~s 405 (549)
T 1x0c_A 336 QTDGLEMY--PGTILQDVFYHTD-DDGLKMYY--SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDV-IHQ 405 (549)
T ss_dssp TCCCCBCC--TTCEEEEEEEEES-SCCEECCS--SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEE-EEC
T ss_pred CCCccccc--CCEEEEeeEEeCC-CCEEEECC--CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEE-ECc
Confidence 36888888 9999999999987 44788864 999999999852 2 2 11 335789998888 444
No 58
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=70.46 E-value=2.9 Score=40.32 Aligned_cols=47 Identities=13% Similarity=0.126 Sum_probs=37.0
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCe-eEee---eCCccEEEeCceecCC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGL-IDVR---RGSTDVTISNNWFRNQ 158 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dgl-ldi~---~~s~~VTIS~n~f~~h 158 (234)
.+.|+|.|.. +||.|.+|++..+..+. +.+. ....+|+|++|.+.+.
T Consensus 355 ~gDDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s 405 (549)
T 1x0c_A 355 TDDDGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQ 405 (549)
T ss_dssp ESSCCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEEC
T ss_pred CCCCEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECc
Confidence 3578999987 99999999998766554 6653 3447999999999764
No 59
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=54.56 E-value=10 Score=35.80 Aligned_cols=60 Identities=12% Similarity=0.016 Sum_probs=41.6
Q ss_pred CCCe-EEeeCCCcEEEEceeeccCCCCeeEeeeC-----------CccEEEeCceecCCccc--------CceeEEEEce
Q 046181 112 KPYA-IRLVTTSKVWIDHNIRYECQDGLIDVRRG-----------STDVTISNNWFRNQEKR--------QNMKVIVVNN 171 (234)
Q Consensus 112 ~~Da-I~i~~s~nVWIDHcsfs~~~Dglldi~~~-----------s~~VTIS~n~f~~h~k~--------~~~~vT~hhN 171 (234)
+++| +....++||.|..|.|.. +..|.++-+ ..+|++++|.|.+...+ .-.+|+|.+-
T Consensus 189 dgiGs~~~~~~~NV~V~n~~~~g--g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~~~I~I~p~~~~isnItfeNI 266 (464)
T 1h80_A 189 FGYGLIQTYGADNILFRNLHSEG--GIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGLAAVMFGPHFMKNGDVQVTNV 266 (464)
T ss_dssp TTCEEEEESEEEEEEEEEEEEES--SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESSSEEEEEECTTCBCCCEEEEEE
T ss_pred CeEEecccCCEeEEEEEeeEEEC--CCEEEEEeCCceeccCCCCcEEEEEEEeEEEECCceeEEEeCCCceEeEEEEEEE
Confidence 4566 556679999999999887 333444433 47999999999885433 2246777766
Q ss_pred EE
Q 046181 172 HF 173 (234)
Q Consensus 172 ~f 173 (234)
..
T Consensus 267 ~~ 268 (464)
T 1h80_A 267 SS 268 (464)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 60
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=53.30 E-value=43 Score=30.77 Aligned_cols=20 Identities=10% Similarity=0.026 Sum_probs=10.1
Q ss_pred CeEEeeCC-CcEEEEceeecc
Q 046181 114 YAIRLVTT-SKVWIDHNIRYE 133 (234)
Q Consensus 114 DaI~i~~s-~nVWIDHcsfs~ 133 (234)
.+|.+.+. ++..|.+|++..
T Consensus 152 ~GI~l~~~~s~n~I~nn~i~~ 172 (400)
T 1ru4_A 152 TGLEINNGGSYNTVINSDAYR 172 (400)
T ss_dssp CSEEECTTCCSCEEESCEEEC
T ss_pred eeEEEEcccCCeEEEceEEEc
Confidence 35665542 245555555543
No 61
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=32.30 E-value=57 Score=31.40 Aligned_cols=20 Identities=15% Similarity=0.184 Sum_probs=14.6
Q ss_pred eeEeeeCCccEEEeCceecC
Q 046181 138 LIDVRRGSTDVTISNNWFRN 157 (234)
Q Consensus 138 lldi~~~s~~VTIS~n~f~~ 157 (234)
.|++.....+|.|++|+|+-
T Consensus 211 gL~f~eSCrNV~IsnC~FsV 230 (514)
T 2vbk_A 211 GLHFLGQCVSVSVSSCHFSR 230 (514)
T ss_dssp EEEEESCCEEEEEESCEEEC
T ss_pred CccccCCCCeEEEeccEEec
Confidence 45666667888888888874
No 62
>1vib_A Neurotoxin B-IV; hydroxylation; HET: HYP; NMR {Cerebratulus lacteus} SCOP: g.2.2.1
Probab=30.70 E-value=11 Score=25.23 Aligned_cols=20 Identities=25% Similarity=0.416 Sum_probs=16.3
Q ss_pred hhhhhhccCCCccccccccc
Q 046181 27 VTDQCWRKNPNWHMHQCQVA 46 (234)
Q Consensus 27 ~~d~c~~~~~~w~~~~~~lA 46 (234)
.-|+|-||+.-|+-.|-.-|
T Consensus 19 ~yd~ci~cqgkwagkrgkca 38 (55)
T 1vib_A 19 KYDLCIRCQGKWAGKRGKCA 38 (55)
T ss_dssp HHHHHCCTTGGGTTTHHHHH
T ss_pred HhhHHheecceeccccCcch
Confidence 35899999999999885544
No 63
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=28.22 E-value=3.1e+02 Score=24.21 Aligned_cols=74 Identities=12% Similarity=0.009 Sum_probs=50.1
Q ss_pred eeEEEEEcCCccccCCCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecCCccc--CceeEEEEceEE
Q 046181 96 CDHLWAIHPPLLSEGPKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRNQEKR--QNMKVIVVNNHF 173 (234)
Q Consensus 96 ~i~gi~I~~~g~i~~~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~h~k~--~~~~vT~hhN~f 173 (234)
.+.||.|+....-.....-||.+ .++++-+.+|.|....|.|.+- +.+..+.+|++.++-+. |.-.+-|.+|-+
T Consensus 97 ~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~---~~r~~~~~c~I~G~vDFIfG~~~a~f~~c~i 172 (319)
T 1gq8_A 97 LARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQDSLYVH---SNRQFFINCFIAGTVDFIFGNAAVVLQDCDI 172 (319)
T ss_dssp EEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECSTTCEEEC---SSEEEEESCEEEESSSCEEESCEEEEESCEE
T ss_pred EEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccceeeeec---CccEEEEecEEEeeeeEEecCCcEEEEeeEE
Confidence 45888888221111233456666 4899999999999999987763 23457888888876554 455566777776
No 64
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=24.57 E-value=38 Score=28.79 Aligned_cols=46 Identities=13% Similarity=0.057 Sum_probs=25.6
Q ss_pred CCCCeEEeeCCCcEEEEceeeccCCCCeeEeeeCCccEEEeCceecC
Q 046181 111 PKPYAIRLVTTSKVWIDHNIRYECQDGLIDVRRGSTDVTISNNWFRN 157 (234)
Q Consensus 111 ~~~DaI~i~~s~nVWIDHcsfs~~~Dglldi~~~s~~VTIS~n~f~~ 157 (234)
-..||+++.++..+.|.-..+..+.|..+... +...++|++-...+
T Consensus 85 VcEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~N-g~Gtv~I~nF~~~~ 130 (196)
T 3t9g_A 85 VGEDALTVKSEGVVEVIGGSAKEAADKVFQLN-APCTFKVKNFTATN 130 (196)
T ss_dssp CCSCSEEECSSEEEEEESCEEEEEEEEEEEEC-SSEEEEEEEEEEEE
T ss_pred eeceeeEEcCCCeEEEECCCccCCCceEEEEC-CCceEEEeeEEEcc
Confidence 34566666655566666666666666655543 23445565444443
Done!