Your job contains 1 sequence.
>046192
MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ
VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF
LKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTIDINNDG
LPDLEIV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046192
(187 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040282 - symbol:RR3 "response regulator 3" sp... 517 1.4e-52 2
TAIR|locus:2080590 - symbol:ARR9 "response regulator 9" s... 536 1.2e-51 1
UNIPROTKB|Q4GZK2 - symbol:rr9 "Type A response regulator ... 528 8.3e-51 1
UNIPROTKB|Q4GZK7 - symbol:rr4 "Type A response regulator ... 511 5.2e-49 1
TAIR|locus:2194584 - symbol:ARR4 "response regulator 4" s... 444 6.6e-42 1
TAIR|locus:2025911 - symbol:ARR3 "response regulator 3" s... 439 2.2e-41 1
TAIR|locus:2102509 - symbol:RR17 "response regulator 17" ... 433 9.6e-41 1
TAIR|locus:2011286 - symbol:ARR7 "response regulator 7" s... 423 1.1e-39 1
TAIR|locus:2027237 - symbol:ARR15 "response regulator 15"... 423 1.1e-39 1
TAIR|locus:2097870 - symbol:RR5 "response regulator 5" sp... 422 1.4e-39 1
TAIR|locus:2170723 - symbol:ARR6 "response regulator 6" s... 421 1.8e-39 1
UNIPROTKB|Q4GZK8 - symbol:rr3 "Type A response regulator ... 381 3.1e-35 1
UNIPROTKB|Q4GZK5 - symbol:rr6 "Type A response regulator ... 375 1.3e-34 1
UNIPROTKB|Q4GZK4 - symbol:rr7 "Type A response regulator ... 337 1.4e-30 1
UNIPROTKB|Q4GZL0 - symbol:rr1 "Type A response regulator ... 320 9.1e-29 1
UNIPROTKB|Q4GZK3 - symbol:rr8 "Type A response regulator ... 274 6.8e-24 1
UNIPROTKB|Q4GZK9 - symbol:rr2 "Type A response regulator ... 260 2.1e-22 1
TAIR|locus:2054895 - symbol:AT2G07440 species:3702 "Arabi... 204 1.5e-19 2
DICTYBASE|DDB_G0284331 - symbol:regA "response regulator ... 173 5.7e-12 1
TAIR|locus:2044376 - symbol:PRR9 "pseudo-response regulat... 166 1.4e-11 1
TAIR|locus:2040194 - symbol:RR12 "response regulator 12" ... 166 2.1e-11 1
UNIPROTKB|Q8EC92 - symbol:cheV "Chemotaxis signal transdu... 157 4.7e-11 1
TIGR_CMR|SO_3252 - symbol:SO_3252 "chemotaxis protein Che... 157 4.7e-11 1
UNIPROTKB|Q0C4H5 - symbol:cheY "Chemotaxis protein CheY" ... 148 1.5e-10 1
TAIR|locus:2151206 - symbol:PRR7 "pseudo-response regulat... 159 1.6e-10 1
TAIR|locus:2116587 - symbol:RR10 "response regulator 10" ... 156 2.2e-10 1
TIGR_CMR|CPS_1520 - symbol:CPS_1520 "chemotaxis protein C... 146 2.5e-10 1
TAIR|locus:2008585 - symbol:ARR11 "response regulator 11"... 155 2.6e-10 1
UNIPROTKB|Q9KQ05 - symbol:VC_2202 "Chemotaxis protein Che... 149 3.8e-10 1
TIGR_CMR|VC_2202 - symbol:VC_2202 "chemotaxis protein Che... 149 3.8e-10 1
TIGR_CMR|SPO_3037 - symbol:SPO_3037 "DNA-binding response... 145 6.9e-10 1
TIGR_CMR|BA_0994 - symbol:BA_0994 "response regulator" sp... 148 8.2e-10 1
TIGR_CMR|GSU_1038 - symbol:GSU_1038 "sensory box histidin... 150 8.7e-10 1
UNIPROTKB|Q9WYT9 - symbol:TM_0468 "Response regulator" sp... 140 1.1e-09 1
TIGR_CMR|GSU_2535 - symbol:GSU_2535 "response regulator" ... 140 1.1e-09 1
TIGR_CMR|GSU_1671 - symbol:GSU_1671 "response regulator/G... 145 1.2e-09 1
UNIPROTKB|P71403 - symbol:cheY "Chemotaxis protein CheY h... 139 1.4e-09 1
UNIPROTKB|Q4KG39 - symbol:cheY "Chemotaxis protein CheY" ... 139 1.4e-09 1
TIGR_CMR|SO_3209 - symbol:SO_3209 "chemotaxis protein Che... 139 1.4e-09 1
UNIPROTKB|Q48GG3 - symbol:cheY2 "Chemotaxis protein CheY"... 137 2.2e-09 1
TIGR_CMR|GSU_1285 - symbol:GSU_1285 "sensory box sensor h... 148 2.6e-09 1
TIGR_CMR|CJE_1664 - symbol:CJE_1664 "DNA-binding response... 137 2.7e-09 1
TIGR_CMR|GSU_1316 - symbol:GSU_1316 "response regulator" ... 141 3.3e-09 1
TAIR|locus:2093668 - symbol:RR1 "response regulator 1" sp... 145 4.7e-09 1
TAIR|locus:2130095 - symbol:RR2 "response regulator 2" sp... 143 7.3e-09 1
TIGR_CMR|CPS_3950 - symbol:CPS_3950 "response regulator/G... 142 7.4e-09 1
UNIPROTKB|Q55169 - symbol:rcp1 "Response regulator rcp1" ... 132 7.6e-09 1
UNIPROTKB|Q9KKK8 - symbol:VC_A1096 "Chemotaxis protein Ch... 132 7.6e-09 1
TIGR_CMR|VC_A1096 - symbol:VC_A1096 "chemotaxis protein C... 132 7.6e-09 1
TAIR|locus:2065398 - symbol:RR14 "response regulator 14" ... 139 8.0e-09 1
TAIR|locus:2163198 - symbol:TOC1 "TIMING OF CAB EXPRESSIO... 142 8.4e-09 1
TIGR_CMR|GSU_1658 - symbol:GSU_1658 "response regulator/G... 140 8.7e-09 1
UNIPROTKB|Q9KRN4 - symbol:VC1602 "Chemotaxis protein CheV... 137 9.5e-09 1
TIGR_CMR|VC_1602 - symbol:VC_1602 "chemotaxis protein Che... 137 9.5e-09 1
UNIPROTKB|Q48ND2 - symbol:cheY1 "Chemotaxis protein CheY"... 131 9.7e-09 1
UNIPROTKB|Q9KQD5 - symbol:VC_2065 "Chemotaxis protein Che... 131 9.7e-09 1
TIGR_CMR|VC_2065 - symbol:VC_2065 "chemotaxis protein Che... 131 9.7e-09 1
TIGR_CMR|GSU_2046 - symbol:GSU_2046 "response regulator" ... 138 1.1e-08 1
TIGR_CMR|SPO_1953 - symbol:SPO_1953 "phosphate regulon tr... 132 1.1e-08 1
TIGR_CMR|GSU_2219 - symbol:GSU_2219 "response regulator" ... 130 1.2e-08 1
TIGR_CMR|SPO_0022 - symbol:SPO_0022 "response regulator" ... 138 1.4e-08 1
UNIPROTKB|Q9KRI8 - symbol:VC_1653 "Sensory box sensor his... 142 1.9e-08 1
TIGR_CMR|VC_1653 - symbol:VC_1653 "sensory box sensor his... 142 1.9e-08 1
TIGR_CMR|CJE_1261 - symbol:CJE_1261 "chemotaxis protein C... 128 2.0e-08 1
UNIPROTKB|Q0BZW4 - symbol:pleD "Response regulator PleD" ... 135 3.0e-08 1
UNIPROTKB|Q747K4 - symbol:GSU3261 "Response regulator, pu... 124 5.3e-08 1
UNIPROTKB|Q7D1A8 - symbol:cheY "Chemotaxis receiver prote... 124 5.3e-08 1
TIGR_CMR|GSU_3261 - symbol:GSU_3261 "response regulator" ... 124 5.3e-08 1
NCBI_NP|NP_353545.1 - symbol:cheY "chemotaxisreceiverprot... 124 5.3e-08 1
TIGR_CMR|BA_0996 - symbol:BA_0996 "sensor histidine kinas... 136 6.1e-08 1
TIGR_CMR|APH_0551 - symbol:APH_0551 "response regulator/G... 132 6.3e-08 1
UNIPROTKB|Q8EEQ6 - symbol:cheY "Chemotaxis signal transdu... 123 6.8e-08 1
TIGR_CMR|GSU_1117 - symbol:GSU_1117 "response regulator" ... 123 6.8e-08 1
TIGR_CMR|SO_2318 - symbol:SO_2318 "chemotaxis protein Che... 123 6.8e-08 1
UNIPROTKB|Q48GB2 - symbol:PSPPH_3413 "Chemotaxis protein ... 128 8.1e-08 1
TIGR_CMR|GSU_0879 - symbol:GSU_0879 "chemotaxis protein C... 128 8.3e-08 1
TIGR_CMR|GSU_0598 - symbol:GSU_0598 "sigma-54 dependent D... 131 8.5e-08 1
UNIPROTKB|Q7Y0W3 - symbol:Q7Y0W3 "Two-component response ... 128 1.0e-07 1
UNIPROTKB|Q7Y0W5 - symbol:EHD1 "Two-component response re... 128 1.0e-07 1
UNIPROTKB|Q9KSB1 - symbol:VC_1348 "Response regulator" sp... 129 1.3e-07 1
TIGR_CMR|VC_1348 - symbol:VC_1348 "response regulator" sp... 129 1.3e-07 1
UNIPROTKB|Q8EF67 - symbol:cheY "Chemotaxis signal transdu... 119 1.8e-07 1
TIGR_CMR|SO_2120 - symbol:SO_2120 "chemotaxis protein Che... 119 1.8e-07 1
UNIPROTKB|Q3ADB1 - symbol:cheY1 "Chemotaxis protein CheY"... 118 2.3e-07 1
TIGR_CMR|CHY_1026 - symbol:CHY_1026 "chemotaxis protein C... 118 2.3e-07 1
TAIR|locus:2061971 - symbol:CKI1 "CYTOKININ-INDEPENDENT 1... 130 3.5e-07 1
UNIPROTKB|Q52879 - symbol:cheY1 "CheY1" species:382 "Sino... 116 3.8e-07 1
UNIPROTKB|Q9KRC3 - symbol:VC_1719 "DNA-binding response r... 124 4.2e-07 1
TIGR_CMR|VC_1719 - symbol:VC_1719 "DNA-binding response r... 124 4.2e-07 1
DICTYBASE|DDB_G0282377 - symbol:dhkM "histidine kinase M"... 132 5.0e-07 1
TIGR_CMR|NSE_0512 - symbol:NSE_0512 "response regulator/G... 126 5.6e-07 1
UNIPROTKB|Q9KPC0 - symbol:VC_2453 "Sensor histidine kinas... 127 5.8e-07 1
TIGR_CMR|VC_2453 - symbol:VC_2453 "sensor histidine kinas... 127 5.8e-07 1
TIGR_CMR|GSU_2287 - symbol:GSU_2287 "response regulator" ... 113 7.8e-07 1
UNIPROTKB|P0AE67 - symbol:cheY species:83333 "Escherichia... 112 1.0e-06 1
UNIPROTKB|Q9A5I5 - symbol:pleD "Response regulator PleD" ... 125 1.1e-06 1
UNIPROTKB|P14376 - symbol:rcsC "RcsC sensory histidine ki... 126 1.5e-06 1
UNIPROTKB|Q74DM7 - symbol:cheY34H-1 "Response receiver Ch... 110 1.6e-06 1
TIGR_CMR|GSU_1289 - symbol:GSU_1289 "chemotaxis protein C... 110 1.6e-06 1
UNIPROTKB|Q746Z1 - symbol:GSU3376 "Response receiver-modu... 123 1.7e-06 1
WARNING: Descriptions of 114 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2040282 [details] [associations]
symbol:RR3 "response regulator 3" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA;IMP;TAS] [GO:0007623 "circadian
rhythm" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=RCA] [GO:0048831 "regulation of shoot system
development" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0009536
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0007623
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K14492 eggNOG:COG3706
EMBL:AB010917 EMBL:AC005662 EMBL:AY074643 IPI:IPI00535987
PIR:T48853 RefSeq:NP_181663.1 UniGene:At.244
ProteinModelPortal:O80365 SMR:O80365 IntAct:O80365 STRING:O80365
EnsemblPlants:AT2G41310.1 GeneID:818730 KEGG:ath:AT2G41310
GeneFarm:4125 TAIR:At2g41310 InParanoid:O80365 OMA:METESKF
PhylomeDB:O80365 ProtClustDB:CLSN2683767 Genevestigator:O80365
GermOnline:AT2G41310 Uniprot:O80365
Length = 225
Score = 517 (187.1 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 102/146 (69%), Positives = 123/146 (84%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS- 59
M M T+S+FHVLAVDDS+ DRK+IERLL+ SS QVT VDSG+KALEFLGL +D N+
Sbjct: 1 MVMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNAL 60
Query: 60 -------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL 112
Q +++NLIITDYCMPGMTGYDLL+K+KESA+ + IPVVIMSSEN+P+RI+RCL
Sbjct: 61 STSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCL 120
Query: 113 EEGAEEFFLKPVQLADVNKLKPHLMK 138
EEGAEEFFLKPV+LAD+ KLKPH+MK
Sbjct: 121 EEGAEEFFLKPVKLADLTKLKPHMMK 146
Score = 45 (20.9 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 157 LEEIDSADRTRTRLND 172
+EE+ S DR+R + ND
Sbjct: 205 MEEVVSTDRSRPKYND 220
>TAIR|locus:2080590 [details] [associations]
symbol:ARR9 "response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IPI] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;IMP;TAS] [GO:0007623 "circadian rhythm"
evidence=RCA;IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 GO:GO:0009536 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0007623 GO:GO:0006351
GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034820 KO:K14492 eggNOG:COG3706
ProtClustDB:CLSN2683767 EMBL:AB010918 EMBL:AL138655 EMBL:AY090234
EMBL:AY133571 IPI:IPI00543561 PIR:T47764 RefSeq:NP_191263.1
UniGene:At.245 ProteinModelPortal:O80366 SMR:O80366 IntAct:O80366
STRING:O80366 EnsemblPlants:AT3G57040.1 GeneID:824871
KEGG:ath:AT3G57040 GeneFarm:4126 TAIR:At3g57040 InParanoid:O80366
OMA:GISTDRA PhylomeDB:O80366 Genevestigator:O80366
GermOnline:AT3G57040 Uniprot:O80366
Length = 234
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 106/148 (71%), Positives = 124/148 (83%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT--- 57
MGM +SQFHVLAVDDS+ DRKLIERLL+ SS QVT VDSG+KALEFLGL +
Sbjct: 1 MGMAAESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPN 60
Query: 58 -------NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
N QV++VNLIITDYCMPGMTGYDLL+K+KES++ +DIPVVIMSSEN+P+RI+R
Sbjct: 61 AFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISR 120
Query: 111 CLEEGAEEFFLKPVQLADVNKLKPHLMK 138
CLEEGAEEFFLKPV+LAD+NKLKPH+MK
Sbjct: 121 CLEEGAEEFFLKPVRLADLNKLKPHMMK 148
>UNIPROTKB|Q4GZK2 [details] [associations]
symbol:rr9 "Type A response regulator 9" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0009735
GO:GO:0006355 GO:GO:0035556 GO:GO:0007623 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
EMBL:CM000136 EMBL:AJ938078 STRING:Q4GZK2 Uniprot:Q4GZK2
Length = 201
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 103/143 (72%), Positives = 126/143 (88%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDE----- 55
M + ++ FHVLAVDDS+ DRKLIERLLKTSS+QVT VDSG+KALEFLGL + ++
Sbjct: 1 MAVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIST 60
Query: 56 QTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEG 115
Q++ Q + VNLIITDYCMPGMTGYDLL+KIKES+ L+DIPVVIMSS+NIPSRINRCLEEG
Sbjct: 61 QSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEG 120
Query: 116 AEEFFLKPVQLADVNKLKPHLMK 138
A+EFFLKPV+L+D++KLKPH++K
Sbjct: 121 ADEFFLKPVRLSDMSKLKPHILK 143
>UNIPROTKB|Q4GZK7 [details] [associations]
symbol:rr4 "Type A response regulator 4" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CM000126
EMBL:AJ938073 Uniprot:Q4GZK7
Length = 232
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 103/142 (72%), Positives = 121/142 (85%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS------ 59
+S+FHVLAVDDS+IDRKLIE LLK SSYQVT VDSG+KALE LGL +E + ++S
Sbjct: 7 ESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSSPSSSS 66
Query: 60 ---QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGA 116
Q I VNLIITDYCMPGMTGYDLL+++K S+SLKDIPVVIMSSEN+P+RINRCLE+GA
Sbjct: 67 PDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGA 126
Query: 117 EEFFLKPVQLADVNKLKPHLMK 138
EEFFLKPV+LAD+ KLK HL+K
Sbjct: 127 EEFFLKPVKLADMKKLKSHLLK 148
>TAIR|locus:2194584 [details] [associations]
symbol:ARR4 "response regulator 4" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;TAS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010017
"red or far-red light signaling pathway" evidence=IMP] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;IMP;TAS]
[GO:0010114 "response to red light" evidence=IMP] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA;IMP] [GO:0042752
"regulation of circadian rhythm" evidence=IGI] [GO:0009735
"response to cytokinin stimulus" evidence=IEP] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IDA] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009963 "positive
regulation of flavonoid biosynthetic process" evidence=RCA]
[GO:0010363 "regulation of plant-type hypersensitive response"
evidence=RCA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0007623 GO:GO:0004674
GO:GO:0046777 GO:GO:0006351 GO:GO:0042752 GO:GO:0010114
GO:GO:0009793 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AC007067 GO:GO:0010017
HOGENOM:HOG000034820 KO:K14492 ProtClustDB:CLSN2912722
EMBL:AB008487 EMBL:AB010915 EMBL:AF057282 IPI:IPI00523637
PIR:T48851 RefSeq:NP_172517.1 UniGene:At.22981 UniGene:At.67259
ProteinModelPortal:O82798 SMR:O82798 IntAct:O82798 STRING:O82798
EnsemblPlants:AT1G10470.1 GeneID:837587 KEGG:ath:AT1G10470
GeneFarm:4121 TAIR:At1g10470 InParanoid:O82798 OMA:KRIRDYM
PhylomeDB:O82798 Genevestigator:O82798 GermOnline:AT1G10470
Uniprot:O82798
Length = 259
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 85/133 (63%), Positives = 112/133 (84%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS++DR +IERLL+ +S +VTAVDSG +ALEFLGL NE ++V+LI
Sbjct: 33 EVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLI 92
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITDYCMPGMTGY+LL+KIKES++ +++PVVIMSSEN+ +RI+RCLEEGA++F LKPV+LA
Sbjct: 93 ITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLA 152
Query: 128 DVNKLKPHLMKGI 140
DV +L+ HL K +
Sbjct: 153 DVKRLRSHLTKDV 165
>TAIR|locus:2025911 [details] [associations]
symbol:ARR3 "response regulator 3" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;IDA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IDA;TAS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=TAS] [GO:0010114
"response to red light" evidence=IMP] [GO:0010161 "red light
signaling pathway" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0042752 "regulation of circadian rhythm"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0007623 GO:GO:0006351 GO:GO:0042752 EMBL:AC007258
GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034820 KO:K14492 EMBL:AB008486 IPI:IPI00532280
PIR:T50853 RefSeq:NP_176202.1 UniGene:At.237
ProteinModelPortal:Q9ZWS9 SMR:Q9ZWS9 IntAct:Q9ZWS9 STRING:Q9ZWS9
EnsemblPlants:AT1G59940.1 GeneID:842288 KEGG:ath:AT1G59940
GeneFarm:4120 TAIR:At1g59940 eggNOG:COG3706 InParanoid:Q9ZWS9
OMA:RSEMIGI PhylomeDB:Q9ZWS9 ProtClustDB:CLSN2912722
Genevestigator:Q9ZWS9 GermOnline:AT1G59940 GO:GO:0010161
Uniprot:Q9ZWS9
Length = 231
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 87/136 (63%), Positives = 113/136 (83%)
Query: 6 DS-QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
DS Q HVLAVDDS++DR +IERLL+ +S +VTAVDSG +ALEFLGL ++ ++V
Sbjct: 29 DSDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKV 88
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+LIITDYCMPGMTGY+LL+KIKES S K++PVVIMSSEN+ +RI+RCLEEGAE+F LKPV
Sbjct: 89 DLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPV 148
Query: 125 QLADVNKLKPHLMKGI 140
+LADV +L+ +L + +
Sbjct: 149 KLADVKRLRSYLTRDV 164
>TAIR|locus:2102509 [details] [associations]
symbol:RR17 "response regulator 17" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=TAS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005739 GO:GO:0005634
GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 KO:K14492
EMBL:AF305722 EMBL:AL163972 IPI:IPI00540746 PIR:T49039
RefSeq:NP_567037.1 UniGene:At.5240 ProteinModelPortal:Q9FPR6
SMR:Q9FPR6 STRING:Q9FPR6 EnsemblPlants:AT3G56380.1 GeneID:824805
KEGG:ath:AT3G56380 GeneFarm:4130 TAIR:At3g56380 InParanoid:Q9FPR6
OMA:MEEELHV PhylomeDB:Q9FPR6 ProtClustDB:CLSN2917444
Genevestigator:Q9FPR6 GermOnline:AT3G56380 Uniprot:Q9FPR6
Length = 153
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 82/134 (61%), Positives = 114/134 (85%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS--QVIQ 63
+ + HVLAVDD++IDRKL+ER+LK SS +VT ++G +ALE+LGL + +QT+S V++
Sbjct: 17 EEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGL-GDPQQTDSLTNVMK 75
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
VNLIITDYCMPGMTG++LL+K+KES++LK++PVVI+SSENIP+RIN+CL GA+ F KP
Sbjct: 76 VNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKP 135
Query: 124 VQLADVNKLKPHLM 137
++L+DV KLK HL+
Sbjct: 136 LKLSDVEKLKCHLL 149
>TAIR|locus:2011286 [details] [associations]
symbol:ARR7 "response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA;IMP;TAS] [GO:0019827 "stem cell
maintenance" evidence=IMP] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=RCA] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0010200 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K14492
ProtClustDB:CLSN2914197 eggNOG:COG3706 EMBL:AB008490 EMBL:AC068602
IPI:IPI00536268 PIR:T50854 RefSeq:NP_173339.1 UniGene:At.238
ProteinModelPortal:Q9ZWS7 SMR:Q9ZWS7 IntAct:Q9ZWS7 STRING:Q9ZWS7
EnsemblPlants:AT1G19050.1 GeneID:838487 KEGG:ath:AT1G19050
GeneFarm:4124 TAIR:At1g19050 InParanoid:Q9ZWS7 OMA:LRISSCK
PhylomeDB:Q9ZWS7 Genevestigator:Q9ZWS7 GermOnline:AT1G19050
GO:GO:0019827 Uniprot:Q9ZWS7
Length = 206
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 82/135 (60%), Positives = 110/135 (81%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
VT + HVLAVDDSI+DRK+IERLL+ SS +VT V+SG +AL++LGL +N + ++
Sbjct: 19 VTTPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLK 78
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
VNLI+TDY MPG++GYDLL+KIKES++ +++PVVIMSSENI RI CL+EGAEEF LKP
Sbjct: 79 VNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKP 138
Query: 124 VQLADVNKLKPHLMK 138
V+LADV ++K +M+
Sbjct: 139 VKLADVKRIKQLIMR 153
>TAIR|locus:2027237 [details] [associations]
symbol:ARR15 "response regulator 15" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=IGI;RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007623
"circadian rhythm" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AC008263 EMBL:AC013258
EMBL:AF305720 IPI:IPI00538856 RefSeq:NP_177627.1 UniGene:At.11589
ProteinModelPortal:Q7G8V2 SMR:Q7G8V2 IntAct:Q7G8V2 STRING:Q7G8V2
EnsemblPlants:AT1G74890.1 GeneID:843828 KEGG:ath:AT1G74890
GeneFarm:4128 TAIR:At1g74890 HOGENOM:HOG000034820 InParanoid:Q7G8V2
KO:K14492 OMA:KISACKV PhylomeDB:Q7G8V2 ProtClustDB:CLSN2914197
Genevestigator:Q7G8V2 GermOnline:AT1G74890 Uniprot:Q7G8V2
Length = 206
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 81/132 (61%), Positives = 110/132 (83%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS +DRK+IERLLK S+ +VT V+SG +AL++LGL ++ + + ++VNLI
Sbjct: 17 ELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLI 76
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+TDY MPG+TGY+LL+KIKES++L++IPVVIMSSENI RI +C+ EGAEEF LKPV+LA
Sbjct: 77 VTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLA 136
Query: 128 DVNKLKPHLMKG 139
DV +LK +M+G
Sbjct: 137 DVKRLKELIMRG 148
>TAIR|locus:2097870 [details] [associations]
symbol:RR5 "response regulator 5" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;IMP] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=RCA;IMP;TAS] [GO:0010114 "response to red light"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0009536
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0007623
GO:GO:0006351 GO:GO:0010114 GO:GO:0009736 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AL049658
HOGENOM:HOG000034820 KO:K14492 EMBL:AB008488 EMBL:AB010916
EMBL:AF057281 EMBL:AY072390 EMBL:AY114698 IPI:IPI00516847
PIR:T06673 PIR:T50855 PIR:T50856 RefSeq:NP_190393.1
UniGene:At.24915 ProteinModelPortal:Q9SB04 SMR:Q9SB04 IntAct:Q9SB04
STRING:Q9SB04 EnsemblPlants:AT3G48100.1 GeneID:823965
KEGG:ath:AT3G48100 GeneFarm:4122 TAIR:At3g48100 InParanoid:Q9SB04
OMA:LEANDIY PhylomeDB:Q9SB04 ProtClustDB:CLSN2684027
Genevestigator:Q9SB04 GermOnline:AT3G48100 Uniprot:Q9SB04
Length = 184
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 86/133 (64%), Positives = 109/133 (81%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV----IQVN 65
HVLAVDDS++DRK IERLL+ SS +VT VDS +AL++LGL D + NS V +++N
Sbjct: 26 HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL---DGENNSSVGFEDLKIN 82
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
LI+TDY MPGMTGY+LL+KIKES++ ++IPVVIMSSENI RI+RCLEEGAE+F LKPV+
Sbjct: 83 LIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVK 142
Query: 126 LADVNKLKPHLMK 138
LADV +L+ LMK
Sbjct: 143 LADVKRLRDSLMK 155
>TAIR|locus:2170723 [details] [associations]
symbol:ARR6 "response regulator 6" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;TAS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=RCA;IMP;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007623 "circadian rhythm" evidence=RCA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0005739 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009536 GO:GO:0006355 GO:GO:0006351 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K14492 ProtClustDB:CLSN2684027
EMBL:AB008489 EMBL:AB008491 EMBL:AB009053 EMBL:BT004799
IPI:IPI00547780 PIR:T50857 PIR:T50860 RefSeq:NP_201097.1
UniGene:At.24207 ProteinModelPortal:Q9ZWS6 SMR:Q9ZWS6 IntAct:Q9ZWS6
STRING:Q9ZWS6 EnsemblPlants:AT5G62920.1 GeneID:836412
KEGG:ath:AT5G62920 GeneFarm:4123 TAIR:At5g62920 InParanoid:Q9ZWS6
OMA:DDSQEIK PhylomeDB:Q9ZWS6 Genevestigator:Q9ZWS6
GermOnline:AT5G62920 Uniprot:Q9ZWS6
Length = 186
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 82/129 (63%), Positives = 107/129 (82%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DRK IERLL+ SS +VT VDS +AL++LGL E++ + ++VNLI+T
Sbjct: 26 HVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIMT 85
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MPGMTGY+LL+KIKES++ +++PVVIMSSENI RI+RCLEEGAE+F LKPV+L+DV
Sbjct: 86 DYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSDV 145
Query: 130 NKLKPHLMK 138
+L+ LMK
Sbjct: 146 KRLRDSLMK 154
>UNIPROTKB|Q4GZK8 [details] [associations]
symbol:rr3 "Type A response regulator 3" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0005737
GO:GO:0009735 GO:GO:0006355 GO:GO:0035556 GO:GO:0007623
GO:GO:0010114 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CM000127 EMBL:AJ938072
STRING:Q4GZK8 Uniprot:Q4GZK8
Length = 131
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 78/129 (60%), Positives = 101/129 (78%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
V + + HVLAVDDSI+DR +I RLL++S Y+VT VDSG +ALE L L D
Sbjct: 6 VPEPEPHVLAVDDSIVDRTVISRLLRSSKYRVTTVDSGKRALEVLSL---DRN------- 55
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
V++IITDYCMP MTG+DLL+++KESA LK+IPVV+MSSEN P+RI RCLEEGAE+F +KP
Sbjct: 56 VHMIITDYCMPEMTGFDLLKRVKESAELKEIPVVLMSSENSPTRIRRCLEEGAEDFLIKP 115
Query: 124 VQLADVNKL 132
V+ +DV++L
Sbjct: 116 VRPSDVSRL 124
>UNIPROTKB|Q4GZK5 [details] [associations]
symbol:rr6 "Type A response regulator 6" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0005737
GO:GO:0009735 GO:GO:0006355 GO:GO:0035556 GO:GO:0007623
GO:GO:0010114 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AJ938075 ProteinModelPortal:Q4GZK5 KEGG:dosa:Os04t0673300-01
Gramene:Q4GZK5 Uniprot:Q4GZK5
Length = 170
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 76/131 (58%), Positives = 101/131 (77%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV 61
G S+ HVLAVDDS +DR +I ++L++S Y+VT V+S +ALE L L V
Sbjct: 43 GDEAQSEMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCL--------GLV 94
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
VN+IITDY MPGMTGY+LL+++KES+ LK+IPVVIMSSEN+P+RI+RCLEEGAE+F L
Sbjct: 95 PNVNMIITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLL 154
Query: 122 KPVQLADVNKL 132
KPV+ +DV++L
Sbjct: 155 KPVRPSDVSRL 165
>UNIPROTKB|Q4GZK4 [details] [associations]
symbol:rr7 "Type A response regulator 7" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 EMBL:AJ938076
ProteinModelPortal:Q4GZK4 KEGG:dosa:Os07t0449700-01 Gramene:Q4GZK4
Uniprot:Q4GZK4
Length = 206
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 72/129 (55%), Positives = 96/129 (74%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+V+AVDDS +DR +I LL+ S Y+ DSG +ALE LG + N V++IIT
Sbjct: 92 YVMAVDDSSVDRAVITALLRRSKYR----DSGKRALEILG-----SEPN-----VSMIIT 137
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP MTGYDLL+KIKES+ LK IPVVIMSSEN+P+RI+RCLEEGAE+F LKPV+ AD+
Sbjct: 138 DYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADI 197
Query: 130 NKLKPHLMK 138
+++ +++
Sbjct: 198 SRITSRMLQ 206
>UNIPROTKB|Q4GZL0 [details] [associations]
symbol:rr1 "Type A response regulator 1" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CM000129 EMBL:AJ938070 eggNOG:NOG76823
Uniprot:Q4GZL0
Length = 231
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 66/127 (51%), Positives = 92/127 (72%)
Query: 11 VLAVDDSIIDRKLIERLLKTS----SYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
VL VDDS +DR++++ LL +S S+ V AVDS KA+EFLGL E ++ Q I ++
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKE---QAI--DM 64
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
++TDYCMP MTGY+LL+ IK + LK IPV++MSSEN P RI+RC+ GAE+F +KP+Q
Sbjct: 65 VLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQS 124
Query: 127 ADVNKLK 133
DV +L+
Sbjct: 125 KDVQRLR 131
>UNIPROTKB|Q4GZK3 [details] [associations]
symbol:rr8 "Type A response regulator 8" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:AJ938077 ProteinModelPortal:Q4GZK3
STRING:Q4GZK3 KEGG:dosa:Os08t0376700-01 KEGG:dosa:Os08t0377200-01
Gramene:Q4GZK3 Uniprot:Q4GZK3
Length = 121
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 60/131 (45%), Positives = 88/131 (67%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVL VDD+ +DR ++ L + +VTAV+S +AL FL D + + V++I++
Sbjct: 5 HVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFL-----DSEHD-----VDMIVS 54
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DYCMP MTGY+LL ++K+S L +PVVI SS+NIP RI +CL+ GA+++ LKPV++ DV
Sbjct: 55 DYCMPDMTGYNLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVDV 114
Query: 130 NKLKPHLMKGI 140
P +MK I
Sbjct: 115 ----PRIMKYI 121
>UNIPROTKB|Q4GZK9 [details] [associations]
symbol:rr2 "Type A response regulator 2" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 EMBL:AJ938071
ProteinModelPortal:Q4GZK9 KEGG:dosa:Os02t0557800-01 Gramene:Q4GZK9
Uniprot:Q4GZK9
Length = 252
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 57/117 (48%), Positives = 73/117 (62%)
Query: 29 KTSSYQVTAVDSGNKALEFLGLLNEDEQ------------TNSQVIQVNLIITDYCMPGM 76
+ + + VTAVDSG KA+E LG D N Q I + ++TDYCMP M
Sbjct: 39 EAAPFHVTAVDSGKKAMELLGRRRGDRDHLTPSSPAAAAAANDQAIDI--VLTDYCMPEM 96
Query: 77 TGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLK 133
TGYDLL+ IK S IPVV+MSSEN P RI+RCL GAE+F LKP+++ DV +L+
Sbjct: 97 TGYDLLKAIKALGSPNPIPVVVMSSENEPQRISRCLTAGAEDFILKPLKMNDVQRLR 153
>TAIR|locus:2054895 [details] [associations]
symbol:AT2G07440 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006217
IPI:IPI00531473 PIR:H84485 RefSeq:NP_178754.1 UniGene:At.63414
ProteinModelPortal:Q9ZQJ8 SMR:Q9ZQJ8 EnsemblPlants:AT2G07440.1
GeneID:815313 KEGG:ath:AT2G07440 TAIR:At2g07440 InParanoid:Q9ZQJ8
PhylomeDB:Q9ZQJ8 ArrayExpress:Q9ZQJ8 Genevestigator:Q9ZQJ8
Uniprot:Q9ZQJ8
Length = 136
Score = 204 (76.9 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 40/59 (67%), Positives = 50/59 (84%)
Query: 81 LLRKIK-ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMK 138
+ R +K ESA+ + I VVIMSSEN+P+RI+RCLE+GAEEFFLKPV+L D KLKPH+MK
Sbjct: 2 MARDVKWESAAFRSIHVVIMSSENVPTRISRCLEKGAEEFFLKPVKLVDHTKLKPHMMK 60
Score = 43 (20.2 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 157 LEEIDSADRTRTRLND 172
+EE+ S DR R + ND
Sbjct: 116 MEEVISTDRPRPKYND 131
>DICTYBASE|DDB_G0284331 [details] [associations]
symbol:regA "response regulator receiver
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030587 "sorocarp development" evidence=IMP] [GO:0051281
"positive regulation of release of sequestered calcium ion into
cytosol" evidence=IMP] [GO:0051279 "regulation of release of
sequestered calcium ion into cytosol" evidence=IMP] [GO:0046058
"cAMP metabolic process" evidence=IMP] [GO:0031276 "negative
regulation of lateral pseudopodium assembly" evidence=IMP]
[GO:0004115 "3',5'-cyclic-AMP phosphodiesterase activity"
evidence=IDA;IMP] [GO:0005622 "intracellular" evidence=TAS]
[GO:0006970 "response to osmotic stress" evidence=TAS] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IMP] [GO:0047555 "3',5'-cyclic-GMP phosphodiesterase
activity" evidence=IDA] [GO:0006198 "cAMP catabolic process"
evidence=IDA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0004114 "3',5'-cyclic-nucleotide
phosphodiesterase activity" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030552 "cAMP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001789 InterPro:IPR002073 InterPro:IPR003607
InterPro:IPR023088 InterPro:IPR023174 Pfam:PF00072 Pfam:PF00233
PRINTS:PR00387 PROSITE:PS00126 PROSITE:PS50110 SMART:SM00448
SMART:SM00471 dictyBase:DDB_G0284331 GO:GO:0005829
GenomeReviews:CM000153_GR GO:GO:0006355 GO:GO:0035556 GO:GO:0046872
GO:GO:0030435 GO:GO:0030587 GO:GO:0005622 GO:GO:0006970
GO:GO:0051281 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG3706 EMBL:AAFI02000064 GO:GO:0030552 GO:GO:0031276
GO:GO:0004115 GO:GO:0006198 Gene3D:1.10.1300.10 EMBL:U60170
EMBL:AJ005398 RefSeq:XP_638612.1 ProteinModelPortal:Q23917
STRING:Q23917 EnsemblProtists:DDB0191479 GeneID:8624583
KEGG:ddi:DDB_G0284331 OMA:SHYETIC ProtClustDB:CLSZ2728943
Uniprot:Q23917
Length = 793
Score = 173 (66.0 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 39/119 (32%), Positives = 68/119 (57%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S+ +L DD + RK++ LLK Y VT V +G A E++ N+ +Q + +L
Sbjct: 158 SKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYI---NKGQQ------KYDL 208
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI-NRCLEEGAEEFFLKPV 124
++TD MP +TG+DLL++I + + IPV++MS + + N ++ G ++F KP+
Sbjct: 209 VLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPI 267
>TAIR|locus:2044376 [details] [associations]
symbol:PRR9 "pseudo-response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0010017 "red or far-red light signaling pathway" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0006351 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034018
GO:GO:0010017 GO:GO:0009266 EMBL:AB046953 EMBL:AF272040
EMBL:AC005310 EMBL:AY099676 EMBL:AY128856 IPI:IPI00545462
PIR:T02680 RefSeq:NP_566085.1 UniGene:At.1675 UniGene:At.65052
ProteinModelPortal:Q8L500 SMR:Q8L500 STRING:Q8L500 PRIDE:Q8L500
EnsemblPlants:AT2G46790.1 GeneID:819292 KEGG:ath:AT2G46790
GeneFarm:4360 TAIR:At2g46790 eggNOG:COG0745 InParanoid:Q8L500
KO:K12128 OMA:HEACKNI PhylomeDB:Q8L500 ProtClustDB:CLSN2688972
Genevestigator:Q8L500 GermOnline:AT2G46790 Uniprot:Q8L500
Length = 468
Score = 166 (63.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 40/156 (25%), Positives = 80/156 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R++I LL+ Y+V AV G A E L E++++ ++LI+T+
Sbjct: 39 VLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVL-----KEKSHN----IDLILTE 89
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++G+ LL + E + K+IPV++MSS++ + +C+ GA ++ +KP++ ++
Sbjct: 90 LDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELK 149
Query: 131 KLKPHLMKGISXXXXXXXXXXXXXXGLEEIDSADRT 166
L H+ + ++ ++ D T
Sbjct: 150 NLWQHVWRRLTLRDDPTAHAQSLPASQHNLEDTDET 185
>TAIR|locus:2040194 [details] [associations]
symbol:RR12 "response regulator 12" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IGI;TAS]
[GO:0009735 "response to cytokinin stimulus" evidence=IGI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0010380
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0080022
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0048367
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG2204 HOGENOM:HOG000238840
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:BE522295
IPI:IPI00541861 IPI:IPI01019479 RefSeq:NP_180090.6 UniGene:At.19775
ProteinModelPortal:P62598 SMR:P62598 IntAct:P62598 STRING:P62598
GeneID:817056 KEGG:ath:AT2G25180 GeneFarm:3926 TAIR:At2g25180
InParanoid:P62598 OMA:QQAIMAN ArrayExpress:P62598
Genevestigator:P62598 GermOnline:AT2G25180 Uniprot:P62598
Length = 596
Score = 166 (63.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 43/129 (33%), Positives = 74/129 (57%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD K++E LL+ Y VT + KALE LL E++ + +L+I+D
Sbjct: 19 VLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALE---LLRENKN------KFDLVISD 69
Query: 71 YCMPGMTGYDLLRKIKESASLK-DIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MP M G+ LL E L+ D+PV+++S+ + P + + + GA ++ LKPV++ ++
Sbjct: 70 VDMPDMDGFKLL----ELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEEL 125
Query: 130 NKLKPHLMK 138
+ H+++
Sbjct: 126 KNIWQHVVR 134
>UNIPROTKB|Q8EC92 [details] [associations]
symbol:cheV "Chemotaxis signal transduction system response
regulator CheV" species:211586 "Shewanella oneidensis MR-1"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 InterPro:IPR002545
Pfam:PF00072 Pfam:PF01584 PROSITE:PS50110 PROSITE:PS50851
SMART:SM00260 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0016740 GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928 SUPFAM:SSF50341
HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181 PIRSF:PIRSF002867
OMA:QVSRCLQ RefSeq:NP_718806.1 ProteinModelPortal:Q8EC92
GeneID:1170945 KEGG:son:SO_3252 PATRIC:23526188
ProtClustDB:CLSK2304491 Uniprot:Q8EC92
Length = 306
Score = 157 (60.3 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 43/128 (33%), Positives = 72/128 (56%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+H++ +DDS + RK I R L++ + Q+ G +AL+ L + + N+ ++ LII
Sbjct: 179 YHIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKAIASE--MNNVADEIPLII 236
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE--GAEEFFLK--PV 124
+D MP M GY L +I++ LK+I VV+ +S + N+ + + GA +F K P
Sbjct: 237 SDIEMPEMDGYTLTAEIRDDPKLKNIKVVLHTS--LSGVFNQAMVQKVGANDFIAKFNPD 294
Query: 125 QLAD-VNK 131
+LA VNK
Sbjct: 295 ELAAAVNK 302
>TIGR_CMR|SO_3252 [details] [associations]
symbol:SO_3252 "chemotaxis protein CheV" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0016740 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928
SUPFAM:SSF50341 HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181
PIRSF:PIRSF002867 OMA:QVSRCLQ RefSeq:NP_718806.1
ProteinModelPortal:Q8EC92 GeneID:1170945 KEGG:son:SO_3252
PATRIC:23526188 ProtClustDB:CLSK2304491 Uniprot:Q8EC92
Length = 306
Score = 157 (60.3 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 43/128 (33%), Positives = 72/128 (56%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+H++ +DDS + RK I R L++ + Q+ G +AL+ L + + N+ ++ LII
Sbjct: 179 YHIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKAIASE--MNNVADEIPLII 236
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE--GAEEFFLK--PV 124
+D MP M GY L +I++ LK+I VV+ +S + N+ + + GA +F K P
Sbjct: 237 SDIEMPEMDGYTLTAEIRDDPKLKNIKVVLHTS--LSGVFNQAMVQKVGANDFIAKFNPD 294
Query: 125 QLAD-VNK 131
+LA VNK
Sbjct: 295 ELAAAVNK 302
>UNIPROTKB|Q0C4H5 [details] [associations]
symbol:cheY "Chemotaxis protein CheY" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CP000158
GenomeReviews:CP000158_GR KO:K03413 RefSeq:YP_759368.1
ProteinModelPortal:Q0C4H5 STRING:Q0C4H5 GeneID:4290241
KEGG:hne:HNE_0639 PATRIC:32214082 OMA:WNMPVMN
BioCyc:HNEP228405:GI69-682-MONOMER Uniprot:Q0C4H5
Length = 121
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/122 (33%), Positives = 60/122 (49%)
Query: 12 LAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDY 71
L VDDS + RK+ R+++ + VT G +AL+ + E + I+ D+
Sbjct: 5 LVVDDSRVVRKVASRIVRDLGFSVTEAGDGAEALK---MCRES--------MPDAILLDW 53
Query: 72 CMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNK 131
MP M G D LR ++ K +V S EN P IN L GA+EF +KP AD+ +
Sbjct: 54 NMPTMNGIDFLRALRREEGGKVPRIVFCSIENDPEHINEALRSGADEFIMKPFD-ADILE 112
Query: 132 LK 133
K
Sbjct: 113 SK 114
>TAIR|locus:2151206 [details] [associations]
symbol:PRR7 "pseudo-response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0010017 "red or far-red light signaling
pathway" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009639 "response to red or far red light" evidence=RCA]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA]
[GO:0048574 "long-day photoperiodism, flowering" evidence=RCA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005739
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0035556 GO:GO:0003677 GO:GO:0007623 GO:GO:0006351
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 EMBL:AB046954
EMBL:AL162973 EMBL:AY039943 EMBL:AY142560 IPI:IPI00520937
PIR:T48302 RefSeq:NP_568107.1 UniGene:At.20552
ProteinModelPortal:Q93WK5 SMR:Q93WK5 STRING:Q93WK5 PRIDE:Q93WK5
EnsemblPlants:AT5G02810.1 GeneID:831793 KEGG:ath:AT5G02810
GeneFarm:4348 TAIR:At5g02810 eggNOG:COG3437 HOGENOM:HOG000034018
InParanoid:Q93WK5 KO:K12129 OMA:HDERNIL PhylomeDB:Q93WK5
ProtClustDB:CLSN2917538 Genevestigator:Q93WK5 GermOnline:AT5G02810
GO:GO:0010017 GO:GO:0009266 Uniprot:Q93WK5
Length = 727
Score = 159 (61.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 38/128 (29%), Positives = 71/128 (55%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ SY+V +G +A + L LN +++++T+
Sbjct: 80 VLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNN---------HIDIVLTE 130
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI S ++IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 131 VIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELK 190
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 191 ILWQHVWR 198
>TAIR|locus:2116587 [details] [associations]
symbol:RR10 "response regulator 10" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0010380 "regulation of chlorophyll biosynthetic
process" evidence=IGI] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=IGI;RCA] [GO:0048367 "shoot system
development" evidence=IGI] [GO:0080022 "primary root development"
evidence=IGI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 EMBL:AJ005195
EMBL:AL021636 EMBL:AL161580 EMBL:BT003158 IPI:IPI00544491
PIR:T04653 RefSeq:NP_194920.1 UniGene:At.122 PDB:1IRZ PDBsum:1IRZ
ProteinModelPortal:O49397 SMR:O49397 IntAct:O49397 STRING:O49397
PRIDE:O49397 EnsemblPlants:AT4G31920.1 GeneID:829322
KEGG:ath:AT4G31920 GeneFarm:2450 TAIR:At4g31920 eggNOG:COG2204
HOGENOM:HOG000238840 InParanoid:O49397 OMA:THELHNK PhylomeDB:O49397
ProtClustDB:CLSN2685991 EvolutionaryTrace:O49397
Genevestigator:O49397 GermOnline:AT4G31920 GO:GO:0031537
InterPro:IPR017053 PIRSF:PIRSF036392 Uniprot:O49397
Length = 552
Score = 156 (60.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 40/129 (31%), Positives = 74/129 (57%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD ++++ LL+ Y VT + ALE LL E++ + +L+I+D
Sbjct: 19 VLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALE---LLRENKN------KFDLVISD 69
Query: 71 YCMPGMTGYDLLRKIKESASLK-DIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MP M G+ LL E L+ D+PV+++S+ + P + + ++ GA ++ LKPV++ ++
Sbjct: 70 VDMPDMDGFKLL----ELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEEL 125
Query: 130 NKLKPHLMK 138
+ H+++
Sbjct: 126 KNIWQHVVR 134
>TIGR_CMR|CPS_1520 [details] [associations]
symbol:CPS_1520 "chemotaxis protein CheY" species:167879
"Colwellia psychrerythraea 34H" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 OMA:LEANDIY
KO:K03413 RefSeq:YP_268262.1 ProteinModelPortal:Q485K3 SMR:Q485K3
STRING:Q485K3 GeneID:3522501 KEGG:cps:CPS_1520 PATRIC:21466247
BioCyc:CPSY167879:GI48-1601-MONOMER Uniprot:Q485K3
Length = 127
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 38/123 (30%), Positives = 61/123 (49%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSY-QVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
D VL VDD R++++ LL+ + + D GN AL L Q
Sbjct: 2 DKNMKVLVVDDFSTMRRIVKNLLRDLGFTNIQEADDGNTALPML-----------QGGDF 50
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+ ++TD+ MPGM G DLL+ I+ A+L IPV+++++E +I + G + +KP
Sbjct: 51 DFVVTDWNMPGMQGIDLLKAIRADANLSHIPVLLITAEAKKEQIIMAAQAGVNGYIVKPF 110
Query: 125 QLA 127
A
Sbjct: 111 TAA 113
>TAIR|locus:2008585 [details] [associations]
symbol:ARR11 "response regulator 11" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG0745 InterPro:IPR017053
PIRSF:PIRSF036392 EMBL:AJ005194 EMBL:AC008113 EMBL:BT008768
EMBL:AB041532 IPI:IPI00521272 PIR:C96700 PIR:T52034 PIR:T52074
RefSeq:NP_176938.1 UniGene:At.121 ProteinModelPortal:Q9FXD6
SMR:Q9FXD6 IntAct:Q9FXD6 STRING:Q9FXD6 EnsemblPlants:AT1G67710.1
GeneID:843096 KEGG:ath:AT1G67710 GeneFarm:3922 TAIR:At1g67710
HOGENOM:HOG000116485 InParanoid:Q9FXD6 OMA:WITRYDE PhylomeDB:Q9FXD6
ProtClustDB:CLSN2914476 Genevestigator:Q9FXD6 GermOnline:AT1G67710
Uniprot:Q9FXD6
Length = 521
Score = 155 (59.6 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 40/128 (31%), Positives = 72/128 (56%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD K++E++LK SY+VT +AL LL E + +++I+D
Sbjct: 13 VLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALR---LLRERKDG------YDIVISD 63
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL + L D+PV++MS + SR+ + ++ GA ++ LKP+++ ++
Sbjct: 64 VNMPDMDGFKLLEHV--GLEL-DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELK 120
Query: 131 KLKPHLMK 138
+ H+++
Sbjct: 121 IIWQHVLR 128
>UNIPROTKB|Q9KQ05 [details] [associations]
symbol:VC_2202 "Chemotaxis protein CheV" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072
Pfam:PF01584 PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341
KO:K03415 InterPro:IPR024181 PIRSF:PIRSF002867 OMA:QVSRCLQ
HSSP:P06143 PIR:A82107 RefSeq:NP_231833.1 ProteinModelPortal:Q9KQ05
DNASU:2613242 GeneID:2613242 KEGG:vch:VC2202 PATRIC:20083447
ProtClustDB:CLSK2300370 Uniprot:Q9KQ05
Length = 308
Score = 149 (57.5 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 44/133 (33%), Positives = 71/133 (53%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALE-FLGLLNEDEQTNSQVIQVNLIIT 69
+L DDS + RK ++R +++ ++V G A E L +L+E +N Q++L+I+
Sbjct: 184 ILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSEGPISN----QISLVIS 239
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE--GAEEFFLK--PVQ 125
D MP M GY L +I+ LKD+ V++ SS + N+ + E GA F K P +
Sbjct: 240 DIEMPEMDGYTLTAEIRRHNELKDLYVILHSS--LSGVFNQAMVERVGANAFIAKFNPDE 297
Query: 126 LADVNKLKPHLMK 138
L N +K L+K
Sbjct: 298 LG--NAVKAALVK 308
>TIGR_CMR|VC_2202 [details] [associations]
symbol:VC_2202 "chemotaxis protein CheV" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341 KO:K03415
InterPro:IPR024181 PIRSF:PIRSF002867 OMA:QVSRCLQ HSSP:P06143
PIR:A82107 RefSeq:NP_231833.1 ProteinModelPortal:Q9KQ05
DNASU:2613242 GeneID:2613242 KEGG:vch:VC2202 PATRIC:20083447
ProtClustDB:CLSK2300370 Uniprot:Q9KQ05
Length = 308
Score = 149 (57.5 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 44/133 (33%), Positives = 71/133 (53%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALE-FLGLLNEDEQTNSQVIQVNLIIT 69
+L DDS + RK ++R +++ ++V G A E L +L+E +N Q++L+I+
Sbjct: 184 ILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSEGPISN----QISLVIS 239
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE--GAEEFFLK--PVQ 125
D MP M GY L +I+ LKD+ V++ SS + N+ + E GA F K P +
Sbjct: 240 DIEMPEMDGYTLTAEIRRHNELKDLYVILHSS--LSGVFNQAMVERVGANAFIAKFNPDE 297
Query: 126 LADVNKLKPHLMK 138
L N +K L+K
Sbjct: 298 LG--NAVKAALVK 308
>TIGR_CMR|SPO_3037 [details] [associations]
symbol:SPO_3037 "DNA-binding response regulator, LysR
family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000847 InterPro:IPR001789
Pfam:PF00072 Pfam:PF00126 PRINTS:PR00039 PROSITE:PS50110
PROSITE:PS50931 SMART:SM00448 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:YP_168241.1
ProteinModelPortal:Q5LP15 DNASU:3195987 GeneID:3195987
KEGG:sil:SPO3037 PATRIC:23379513 Uniprot:Q5LP15
Length = 269
Score = 145 (56.1 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 42/127 (33%), Positives = 71/127 (55%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD+ + + LLK +Y++ SG AL FL + ++ +LI+ D
Sbjct: 115 LLVVDDTPQNIHHLHGLLK-DAYRIIPQTSGKGALSFL---------SGEL--ADLILLD 162
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY++ R+IK +ASL DIPV+ ++S + P + LE GA +F +P+ A +
Sbjct: 163 IRMPDMDGYEVCRQIKSTASLADIPVIFLTSLDDPMDETKGLEMGACDFITRPIVPAILR 222
Query: 131 -KLKPHL 136
+++ H+
Sbjct: 223 ARIRSHI 229
>TIGR_CMR|BA_0994 [details] [associations]
symbol:BA_0994 "response regulator" species:198094
"Bacillus anthracis str. Ames" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR001932 Pfam:PF00072 Pfam:PF07228 PROSITE:PS50110
SMART:SM00331 SMART:SM00448 GO:GO:0003824 GO:GO:0006355
GO:GO:0035556 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0008152 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF81606 HSSP:Q9A5I4
OMA:ERKWGDL RefSeq:NP_843495.1 RefSeq:YP_017622.1
RefSeq:YP_027204.1 ProteinModelPortal:Q81U90 DNASU:1088940
EnsemblBacteria:EBBACT00000010036 EnsemblBacteria:EBBACT00000013718
EnsemblBacteria:EBBACT00000020226 GeneID:1088940 GeneID:2814732
GeneID:2850195 KEGG:ban:BA_0994 KEGG:bar:GBAA_0994 KEGG:bat:BAS0930
HOGENOM:HOG000084736 ProtClustDB:CLSK916048
BioCyc:BANT260799:GJAJ-1008-MONOMER
BioCyc:BANT261594:GJ7F-1053-MONOMER Uniprot:Q81U90
Length = 380
Score = 148 (57.2 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 28/120 (23%), Positives = 71/120 (59%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L VDD+ ++ +I+++LK + YQ + +++S + E++ + + N +++LI+
Sbjct: 3 ILIVDDNPVNIFVIKKILKQAGYQDLVSLNSAQELFEYIHFGKDSSRHN----EIDLILL 58
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP + G ++ R++++ KDIP++ +++ +++ L+ GA ++ KP+ ++
Sbjct: 59 DIMMPEIDGLEVCRRLQKEEKFKDIPIIFVTALEDANKLAEALDIGAMDYITKPINKVEL 118
>TIGR_CMR|GSU_1038 [details] [associations]
symbol:GSU_1038 "sensory box histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 InterPro:IPR013656 Pfam:PF08448
RefSeq:NP_952091.1 ProteinModelPortal:Q74EC5 GeneID:2688721
KEGG:gsu:GSU1038 PATRIC:22024844 OMA:ECALENA
BioCyc:GSUL243231:GH27-1025-MONOMER Uniprot:Q74EC5
Length = 513
Score = 150 (57.9 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + RK++ L S Y+V + G +A+E L+ D L++ D
Sbjct: 23 ILLVDDDAVTRKMLRNLFTLSGYRVADAEDGARAVEMFRELSPD-----------LVLLD 71
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY I+ + +P++IM++ + + I R + GA +F KPV +N
Sbjct: 72 IMMPVMDGYGACAAIRGLPGGEHVPIIIMTALDDANSIGRAFDAGATDFIEKPVNWMLLN 131
Query: 131 KLKPHLMK 138
P+L++
Sbjct: 132 HRLPYLLR 139
>UNIPROTKB|Q9WYT9 [details] [associations]
symbol:TM_0468 "Response regulator" species:243274
"Thermotoga maritima MSB8" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0046872
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AE000512 GenomeReviews:AE000512_GR KO:K02485 EMBL:AGIJ01000001
PIR:D72374 RefSeq:NP_228278.1 PDB:3DGE PDB:3DGF PDB:3GL9
PDBsum:3DGE PDBsum:3DGF PDBsum:3GL9 IntAct:Q9WYT9 GeneID:897499
KEGG:tma:TM0468 PATRIC:23935833 OMA:WKRIPVI ProtClustDB:CLSK875163
EvolutionaryTrace:Q9WYT9 Uniprot:Q9WYT9
Length = 122
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 40/128 (31%), Positives = 65/128 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS + RK++ LK Y+V ++G ALE L D LI+ D
Sbjct: 5 VLLVDDSAVLRKIVSFNLKKEGYEVIEAENGQIALEKLSEFTPD-----------LIVLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD-V 129
MP M G+ +L+K++E K IPV++++++ + L GA + KP + +
Sbjct: 54 IMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPSQFI 113
Query: 130 NKLKPHLM 137
++K HL+
Sbjct: 114 EEVK-HLL 120
>TIGR_CMR|GSU_2535 [details] [associations]
symbol:GSU_2535 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820
RefSeq:NP_953581.1 ProteinModelPortal:Q74A55 GeneID:2687797
KEGG:gsu:GSU2535 PATRIC:22027919 OMA:DLGCNVY
BioCyc:GSUL243231:GH27-2511-MONOMER Uniprot:Q74A55
Length = 147
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 11 VLAVDDSIIDRKLIER-LLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+L VDD +LIE+ L + Q V +D+G +AL+F+ E E + ++ L+I
Sbjct: 9 ILLVDDDRGHARLIEKHLARMGGMQHVIWLDNGRRALDFI--FEEGEFEGVKTLRPCLVI 66
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MP + G +L ++K I VVI+++ + P+ I C E G + F KP+
Sbjct: 67 ADLNMPELGGVHVLSRLKGDERTSSIAVVILTTSDNPAEIEACHELGCDAFLRKPM 122
>TIGR_CMR|GSU_1671 [details] [associations]
symbol:GSU_1671 "response regulator/GGDEF domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HSSP:P06143 HOGENOM:HOG000167205 RefSeq:NP_952722.1
ProteinModelPortal:Q74CK2 GeneID:2687445 KEGG:gsu:GSU1671
PATRIC:22026193 OMA:IADWLMP ProtClustDB:CLSK740862
BioCyc:GSUL243231:GH27-1671-MONOMER Uniprot:Q74CK2
Length = 322
Score = 145 (56.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/126 (29%), Positives = 71/126 (56%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
F +L VDD+ + R ++E LK++ Y V ++G +ALE + N+ +++
Sbjct: 16 FPILIVDDNRLLRTMLETSLKSAGYDVVMAENGKEALE---IFNKGYYP--------IVM 64
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV-QLA 127
TD+ MP M G +L R I+ S + +++++S++ + + LE GA+E+ +KP Q+
Sbjct: 65 TDWVMPEMDGLELCRAIRADCSGRYTYIILLTSQDSKNDVIAGLEAGADEYLVKPAHQVE 124
Query: 128 DVNKLK 133
+ +LK
Sbjct: 125 LLTRLK 130
>UNIPROTKB|P71403 [details] [associations]
symbol:cheY "Chemotaxis protein CheY homolog" species:85962
"Helicobacter pylori 26695" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005737 GO:GO:0006355 GO:GO:0035556
GO:GO:0046872 GO:GO:0006935 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AE000511
GenomeReviews:AE000511_GR GO:GO:0001539 KO:K03413 EMBL:X81897
EMBL:U97567 EMBL:AF021090 PIR:C64653 RefSeq:NP_207858.1
RefSeq:YP_006934983.1 PDB:3GWG PDB:3H1E PDB:3H1F PDB:3H1G
PDBsum:3GWG PDBsum:3H1E PDBsum:3H1F PDBsum:3H1G
ProteinModelPortal:P71403 DIP:DIP-3256N MINT:MINT-160671
GeneID:13870261 GeneID:899603 KEGG:heo:C694_05515 KEGG:hpy:HP1067
PATRIC:20593473 OMA:DVLITDW ProtClustDB:CLSK872349
EvolutionaryTrace:P71403 Uniprot:P71403
Length = 124
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 34/114 (29%), Positives = 63/114 (55%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L VDDS R++I+ L Y+ V + G +A E L D +++V+ IT
Sbjct: 3 LLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKL-----DANADTKVL-----IT 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D+ MP M G DL++K++ + K+IP++++++E + + L+ G + +KP
Sbjct: 53 DWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>UNIPROTKB|Q4KG39 [details] [associations]
symbol:cheY "Chemotaxis protein CheY" species:220664
"Pseudomonas protegens Pf-5" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0005622 GO:GO:0006935
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K03413 OMA:FGFVISD RefSeq:YP_258794.1
ProteinModelPortal:Q4KG39 SMR:Q4KG39 STRING:Q4KG39 GeneID:3477601
KEGG:pfl:PFL_1668 PATRIC:19872565 ProtClustDB:CLSK715044
BioCyc:PFLU220664:GIX8-1676-MONOMER Uniprot:Q4KG39
Length = 123
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTA-VDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L VDD R++I+ LL+ + T D G A+ L NS ++ ++T
Sbjct: 3 ILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGTTAIPVL---------NSG--SIDFLVT 51
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D+ MPGMTG DLLR ++ LK +PV+++++E +I + G + +KP
Sbjct: 52 DWNMPGMTGIDLLRHVRADEKLKHLPVLMVTAEAKREQIIEAAQAGVNGYVVKP 105
>TIGR_CMR|SO_3209 [details] [associations]
symbol:SO_3209 "chemotaxis protein CheY" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 OMA:GHYDFLV
HSSP:P06143 RefSeq:NP_718764.1 ProteinModelPortal:Q8ECD4 SMR:Q8ECD4
GeneID:1170902 KEGG:son:SO_3209 PATRIC:23526102
ProtClustDB:CLSK907053 Uniprot:Q8ECD4
Length = 127
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 38/127 (29%), Positives = 63/127 (49%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTA-VDSGNKALEFLGLLNEDEQTNSQVIQV 64
D +L VDD R++I+ LL+ + T D G+ AL L Q
Sbjct: 2 DKNMKILIVDDFSTMRRIIKNLLRDLGFNNTQEADDGSTALPML-----------QKGDF 50
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+ ++TD+ MPGM G DLL+ I+ SLK +PV+++++E +I + G + +KP
Sbjct: 51 DFVVTDWNMPGMQGIDLLKAIRADDSLKHLPVLMVTAEAKREQIIAAAQAGVNGYVVKPF 110
Query: 125 QLADVNK 131
A + +
Sbjct: 111 TAATLKE 117
>UNIPROTKB|Q48GG3 [details] [associations]
symbol:cheY2 "Chemotaxis protein CheY" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_275520.1
ProteinModelPortal:Q48GG3 SMR:Q48GG3 STRING:Q48GG3 GeneID:3558182
KEGG:psp:PSPPH_3362 PATRIC:19976130 OMA:GHYDFLV
ProtClustDB:CLSK642753 Uniprot:Q48GG3
Length = 124
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 36/114 (31%), Positives = 62/114 (54%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTA-VDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L VDD R++I+ LL+ + T+ D G AL L Q+ + + ++T
Sbjct: 3 ILIVDDFSTMRRIIKNLLRDLGFTNTSEADDGLTALPML-------QSGA----FDFLVT 51
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D+ MPGMTG DLLR+++ LK +PV+++++E +I + G + +KP
Sbjct: 52 DWNMPGMTGIDLLRQVRADERLKSLPVLMVTAEAKREQIIEAAQAGVNGYVVKP 105
>TIGR_CMR|GSU_1285 [details] [associations]
symbol:GSU_1285 "sensory box sensor histidine
kinase/response regulator" species:243231 "Geobacter sulfurreducens
PCA" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
SUPFAM:SSF47226 InterPro:IPR013656 Pfam:PF08448 RefSeq:NP_952338.1
PDB:2R78 PDBsum:2R78 ProteinModelPortal:Q74DN1 SMR:Q74DN1
GeneID:2688111 KEGG:gsu:GSU1285 PATRIC:22025341
HOGENOM:HOG000144300 OMA:AHTNSER
BioCyc:GSUL243231:GH27-1253-MONOMER EvolutionaryTrace:Q74DN1
Uniprot:Q74DN1
Length = 772
Score = 148 (57.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 36/124 (29%), Positives = 68/124 (54%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS + RK++ LL++ ++VT G +AL +G E +L++ D
Sbjct: 548 VLLVDDSAVSRKVVSLLLESDGHRVTFAGDGVEALAAIG--RE---------AFDLVLMD 596
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
MP M G++ +R I+ E+A +P++ +++ + CLE GA+++ KPV ++
Sbjct: 597 VQMPVMDGFEAMRAIRAGEAAGGARLPIIALTARALAGDRELCLEAGADDYLAKPVNFSE 656
Query: 129 VNKL 132
+ ++
Sbjct: 657 LRRV 660
>TIGR_CMR|CJE_1664 [details] [associations]
symbol:CJE_1664 "DNA-binding response regulator"
species:195099 "Campylobacter jejuni RM1221" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 RefSeq:YP_179645.1 ProteinModelPortal:Q5HSU0
STRING:Q5HSU0 GeneID:3232292 KEGG:cjr:CJE1664 PATRIC:20045123
OMA:KRNICEL ProtClustDB:CLSK879286
BioCyc:CJEJ195099:GJC0-1694-MONOMER Uniprot:Q5HSU0
Length = 226
Score = 137 (53.3 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 29/91 (31%), Positives = 56/91 (61%)
Query: 48 LGLLNEDEQTNS-QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPS 106
+G N DE + + +L+ITD MP M G D+ R+IKE + D+P+V++S+ +
Sbjct: 35 IGAQNGDEGLKKFKKFKPDLVITDIAMPIMDGLDMAREIKEISD--DVPIVVLSAYSEKE 92
Query: 107 RINRCLEEGAEEFFLKPVQLADVNKLKPHLM 137
R+ R ++ G +++ +KPV + ++ K+ +L+
Sbjct: 93 RLLRSIDIGIDKYLIKPVDIEELFKVLDYLI 123
>TIGR_CMR|GSU_1316 [details] [associations]
symbol:GSU_1316 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR003018
InterPro:IPR001789 Pfam:PF00072 Pfam:PF13185 PROSITE:PS50110
SMART:SM00065 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:NP_952369.1
ProteinModelPortal:Q74DK0 DNASU:2685737 GeneID:2685737
KEGG:gsu:GSU1316 PATRIC:22025407 HOGENOM:HOG000276092 OMA:NMVLTDI
ProtClustDB:CLSK828294 BioCyc:GSUL243231:GH27-1295-MONOMER
Uniprot:Q74DK0
Length = 324
Score = 141 (54.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 42/124 (33%), Positives = 65/124 (52%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
MG T+ Q VL VD+S R I L+ Y VT+V SG +A+ + N+
Sbjct: 1 MGHATEIQ--VLVVDESAPSRAFIASTLENGGYIVTSVASGEEAVH---------EVNAA 49
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+ ++TD +PGM+G +LL+ +K+S D+ VVI++S + L GA +F
Sbjct: 50 PFDI--LVTDINLPGMSGLNLLKLLKDS--FPDLEVVIVTSNASSFTAIKALRLGAYDFI 105
Query: 121 LKPV 124
+KPV
Sbjct: 106 IKPV 109
>TAIR|locus:2093668 [details] [associations]
symbol:RR1 "response regulator 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI;RCA] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0010029
"regulation of seed germination" evidence=RCA] [GO:0010043
"response to zinc ion" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] [GO:0048831 "regulation of
shoot system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009736 GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 eggNOG:COG0745
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB016471
EMBL:AP001308 EMBL:AB028608 EMBL:AY056099 EMBL:AK316883
IPI:IPI00534841 IPI:IPI00547650 PIR:T51246 RefSeq:NP_566561.2
RefSeq:NP_850600.2 UniGene:At.183 UniGene:At.48672
ProteinModelPortal:Q940D0 SMR:Q940D0 IntAct:Q940D0 STRING:Q940D0
PaxDb:Q940D0 PRIDE:Q940D0 EnsemblPlants:AT3G16857.2 GeneID:820940
KEGG:ath:AT3G16857 GeneFarm:3920 TAIR:At3g16857
HOGENOM:HOG000034078 InParanoid:Q940D0 OMA:RTCLYEV PhylomeDB:Q940D0
ProtClustDB:CLSN2680844 Genevestigator:Q940D0 GermOnline:AT3G16857
Uniprot:Q940D0
Length = 690
Score = 145 (56.1 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S VL VDD ++ER+L+T Y+VT N+A L LL +++ ++
Sbjct: 35 SGLRVLVVDDDPTCLMILERMLRTCLYEVTKC---NRAEMALSLLRKNKHG------FDI 85
Query: 67 IITDYCMPGMTGYDLLRKIKESASLK-DIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
+I+D MP M G+ LL E L+ D+PV++MS+++ S + + + GA ++ +KPV+
Sbjct: 86 VISDVHMPDMDGFKLL----EHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVR 141
Query: 126 LADVNKLKPHLMK 138
+ + + H+++
Sbjct: 142 MEALKNIWQHVVR 154
>TAIR|locus:2130095 [details] [associations]
symbol:RR2 "response regulator 2" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA;TAS] [GO:0009723 "response
to ethylene stimulus" evidence=IMP] [GO:0009735 "response to
cytokinin stimulus" evidence=IEP;IGI] [GO:0010150 "leaf senescence"
evidence=IMP] [GO:0009873 "ethylene mediated signaling pathway"
evidence=IMP] [GO:0010119 "regulation of stomatal movement"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010029 "regulation of seed germination" evidence=RCA]
[GO:0031537 "regulation of anthocyanin metabolic process"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0010119 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0010150 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:Z97340 EMBL:AL161543 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG2204 InterPro:IPR017053 PIRSF:PIRSF036392
ProtClustDB:CLSN2680844 EMBL:AB016472 EMBL:AJ005196 EMBL:DQ473518
EMBL:DQ473519 EMBL:DQ473520 EMBL:DQ473521 EMBL:AK175378
EMBL:AK175737 EMBL:AK175959 EMBL:AK176614 IPI:IPI00518324
PIR:D71427 PIR:T51247 RefSeq:NP_193346.4 UniGene:At.21955
ProteinModelPortal:Q9ZWJ9 SMR:Q9ZWJ9 IntAct:Q9ZWJ9 STRING:Q9ZWJ9
PaxDb:Q9ZWJ9 PRIDE:Q9ZWJ9 EnsemblPlants:AT4G16110.1 GeneID:827297
KEGG:ath:AT4G16110 GeneFarm:3921 TAIR:At4g16110 InParanoid:Q9ZWJ9
OMA:ILERMLM PhylomeDB:Q9ZWJ9 Genevestigator:Q9ZWJ9
GermOnline:AT4G16110 Uniprot:Q9ZWJ9
Length = 664
Score = 143 (55.4 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+ VL VDD ++ER+L T Y+VT N+A L LL +++ N ++
Sbjct: 26 ANLRVLVVDDDPTCLMILERMLMTCLYRVTKC---NRAESALSLLRKNK--NG----FDI 76
Query: 67 IITDYCMPGMTGYDLLRKIKESASLK-DIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
+I+D MP M G+ LL E L+ D+PV++MS+++ S + + + GA ++ +KPV+
Sbjct: 77 VISDVHMPDMDGFKLL----EHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVR 132
Query: 126 LADVNKLKPHLMK 138
+ + + H+++
Sbjct: 133 IEALKNIWQHVVR 145
>TIGR_CMR|CPS_3950 [details] [associations]
symbol:CPS_3950 "response regulator/GGDEF domain protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 Pfam:PF00563 GO:GO:0006355 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 Gene3D:3.20.20.450
InterPro:IPR001633 SMART:SM00052 SUPFAM:SSF141868 PROSITE:PS50883
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000136246 RefSeq:YP_270608.1 ProteinModelPortal:Q47X62
STRING:Q47X62 GeneID:3523052 KEGG:cps:CPS_3950 PATRIC:21470787
OMA:NITEVES ProtClustDB:CLSK768238
BioCyc:CPSY167879:GI48-3963-MONOMER Uniprot:Q47X62
Length = 566
Score = 142 (55.0 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 40/114 (35%), Positives = 60/114 (52%)
Query: 11 VLAVDDSIIDRKLIERLLKTS--SYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL VDD I+DR+LI+R LK S S +T V+S + AL+ N Q + I+
Sbjct: 6 VLIVDDDIVDRELIKRTLKRSDISCNITEVESVDDALK-----------NLQDSSFDAIL 54
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
DY +P G +LL +IK + D V++MS+ C+ GA++F +K
Sbjct: 55 LDYNLPQRNGIELLLEIKGDPNRHDTAVIMMSTSKEDELALNCINAGAQDFLVK 108
>UNIPROTKB|Q55169 [details] [associations]
symbol:rcp1 "Response regulator rcp1" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 EMBL:BA000022 GenomeReviews:BA000022_GR
HOGENOM:HOG000034820 PIR:S74390 RefSeq:NP_442238.1
RefSeq:YP_005652298.1 PDB:1I3C PDB:1JLK PDBsum:1I3C PDBsum:1JLK
ProteinModelPortal:Q55169 SMR:Q55169 IntAct:Q55169 STRING:Q55169
GeneID:12253517 GeneID:952559 KEGG:syn:slr0474 KEGG:syy:SYNGTS_2345
PATRIC:23842114 KO:K11355 OMA:YELHVNC ProtClustDB:CLSK893477
EvolutionaryTrace:Q55169 Uniprot:Q55169
Length = 147
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 37/124 (29%), Positives = 67/124 (54%)
Query: 11 VLAVDDSIIDRKLIERLLKTSS--YQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+L V+DS D +L++ +LKTS+ +++ + G A+ FL + E NS + NLI+
Sbjct: 11 ILLVEDSKADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQ--QQGEYENSP--RPNLIL 66
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
D +P G ++L +IK++ LK IPVV++++ + + E + K L D
Sbjct: 67 LDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKD 126
Query: 129 VNKL 132
+ K+
Sbjct: 127 LFKM 130
>UNIPROTKB|Q9KKK8 [details] [associations]
symbol:VC_A1096 "Chemotaxis protein CheY" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 EMBL:AE003853 GenomeReviews:AE003853_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 OMA:MEEELHV
KO:K03413 HSSP:P06143 PIR:D82380 RefSeq:NP_233476.1
ProteinModelPortal:Q9KKK8 DNASU:2612407 GeneID:2612407
KEGG:vch:VCA1096 PATRIC:20086710 ProtClustDB:CLSK789264
Uniprot:Q9KKK8
Length = 125
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 32/113 (28%), Positives = 60/113 (53%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDDSI R+++ L+ + Y+V G +AL +Q + ++II+D
Sbjct: 10 VLAVDDSISIRQMVSHTLQDAGYEVETAADGREAL-----------AKAQKARFDVIISD 58
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP MTG++ ++ ++ + K P++++++E P + GA + +KP
Sbjct: 59 VNMPVMTGFEFVKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKP 111
>TIGR_CMR|VC_A1096 [details] [associations]
symbol:VC_A1096 "chemotaxis protein CheY" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 OMA:MEEELHV KO:K03413
HSSP:P06143 PIR:D82380 RefSeq:NP_233476.1 ProteinModelPortal:Q9KKK8
DNASU:2612407 GeneID:2612407 KEGG:vch:VCA1096 PATRIC:20086710
ProtClustDB:CLSK789264 Uniprot:Q9KKK8
Length = 125
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 32/113 (28%), Positives = 60/113 (53%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDDSI R+++ L+ + Y+V G +AL +Q + ++II+D
Sbjct: 10 VLAVDDSISIRQMVSHTLQDAGYEVETAADGREAL-----------AKAQKARFDVIISD 58
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP MTG++ ++ ++ + K P++++++E P + GA + +KP
Sbjct: 59 VNMPVMTGFEFVKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKP 111
>TAIR|locus:2065398 [details] [associations]
symbol:RR14 "response regulator 14" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG0745 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AC006069
EMBL:AY099726 EMBL:AY128887 EMBL:AY088149 IPI:IPI00545640
PIR:G84428 RefSeq:NP_178285.1 UniGene:At.42470
ProteinModelPortal:Q8L9Y3 SMR:Q8L9Y3 IntAct:Q8L9Y3 STRING:Q8L9Y3
EnsemblPlants:AT2G01760.1 GeneID:814707 KEGG:ath:AT2G01760
GeneFarm:3930 TAIR:At2g01760 HOGENOM:HOG000034077 InParanoid:Q8L9Y3
OMA:SWILERS PhylomeDB:Q8L9Y3 ProtClustDB:CLSN2913129
Genevestigator:Q8L9Y3 GermOnline:AT2G01760 Uniprot:Q8L9Y3
Length = 382
Score = 139 (54.0 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 36/132 (27%), Positives = 70/132 (53%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S +L VDD ++E++L YQVT + AL L E+ +S +L
Sbjct: 9 SGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILR-----ERKDS----FDL 59
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
+++D MPGM GY+LL+++ D+PV++MS + + + + GA ++ +KP++
Sbjct: 60 VLSDVHMPGMNGYNLLQQV--GLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRP 117
Query: 127 ADVNKLKPHLMK 138
++ + H+++
Sbjct: 118 EELKNIWQHVVR 129
>TAIR|locus:2163198 [details] [associations]
symbol:TOC1 "TIMING OF CAB EXPRESSION 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010031 "circumnutation" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=TAS] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010629 "negative regulation of gene expression"
evidence=IDA] [GO:0009639 "response to red or far red light"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072
Pfam:PF06203 PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0006351
GO:GO:0010629 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AB041530 EMBL:AF272039 EMBL:AJ251086 EMBL:AB010073
EMBL:AY094393 EMBL:BT005816 IPI:IPI00517214 PIR:T52075 PIR:T52076
RefSeq:NP_200946.1 UniGene:At.21919 ProteinModelPortal:Q9LKL2
SMR:Q9LKL2 IntAct:Q9LKL2 STRING:Q9LKL2 EnsemblPlants:AT5G61380.1
GeneID:836259 KEGG:ath:AT5G61380 GeneFarm:4313 TAIR:At5g61380
eggNOG:NOG242953 HOGENOM:HOG000034017 InParanoid:Q9LKL2 KO:K12127
OMA:IPIIMMS PhylomeDB:Q9LKL2 ProtClustDB:CLSN2686914
Genevestigator:Q9LKL2 GermOnline:AT5G61380 GO:GO:0010031
Uniprot:Q9LKL2
Length = 618
Score = 142 (55.0 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 36/137 (26%), Positives = 70/137 (51%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV 61
G + S+ +L D+ + LL SYQVTAV S + ++ L N++
Sbjct: 12 GFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDAL---------NAEG 62
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
+++I+ + +P G +LR I L+ IPV++MS ++ + +CL+ GA ++ +
Sbjct: 63 PDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLV 122
Query: 122 KPVQLADVNKLKPHLMK 138
KP++ ++ L H+ +
Sbjct: 123 KPLRTNELLNLWTHMWR 139
>TIGR_CMR|GSU_1658 [details] [associations]
symbol:GSU_1658 "response regulator/GGDEF domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 KO:K02488 HSSP:P06143 RefSeq:NP_952709.1
ProteinModelPortal:Q74CL4 GeneID:2685291 KEGG:gsu:GSU1658
PATRIC:22026165 HOGENOM:HOG000131459 OMA:NINFLEE
ProtClustDB:CLSK924527 BioCyc:GSUL243231:GH27-1650-MONOMER
Uniprot:Q74CL4
Length = 458
Score = 140 (54.3 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 36/113 (31%), Positives = 63/113 (55%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+D R++ LLK Y+V V SG + L+ L ++Q + +L+ITD
Sbjct: 4 ILVVEDDRFFRQMYVDLLKEEGYEVDTVASGTEGLKRL-----EKQ------EYHLVITD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MPGM+G ++L ++K+ A D+ +++ N+ S + L+ GA ++ LKP
Sbjct: 53 LVMPGMSGIEVLSRVKQKAPNVDV-ILVTGHANLESAVY-ALKNGARDYILKP 103
>UNIPROTKB|Q9KRN4 [details] [associations]
symbol:VC1602 "Chemotaxis protein CheV" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072
Pfam:PF01584 PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341 KO:K03415
OMA:AKWIGIV InterPro:IPR024181 PIRSF:PIRSF002867 HSSP:P04042
EMBL:AE004237 PIR:A82180 RefSeq:NP_231242.1
ProteinModelPortal:Q9KRN4 DNASU:2613858 GeneID:2613858
KEGG:vch:VC1602 PATRIC:20082263 ProtClustDB:CLSK874446
Uniprot:Q9KRN4
Length = 328
Score = 137 (53.3 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 34/115 (29%), Positives = 60/115 (52%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNED-EQTNSQVIQ-VNLII 68
++ VDDS R LI+ L ++ Y + A G +A E L L + ++ N V + ++ ++
Sbjct: 198 IMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQAAKEENVPVSELIDAVV 257
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
TD MP M G L++++++ S +P+V+ SS + L GA + KP
Sbjct: 258 TDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKP 312
>TIGR_CMR|VC_1602 [details] [associations]
symbol:VC_1602 "chemotaxis protein CheV" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GenomeReviews:AE003852_GR GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 SUPFAM:SSF50341 KO:K03415 OMA:AKWIGIV
InterPro:IPR024181 PIRSF:PIRSF002867 HSSP:P04042 EMBL:AE004237
PIR:A82180 RefSeq:NP_231242.1 ProteinModelPortal:Q9KRN4
DNASU:2613858 GeneID:2613858 KEGG:vch:VC1602 PATRIC:20082263
ProtClustDB:CLSK874446 Uniprot:Q9KRN4
Length = 328
Score = 137 (53.3 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 34/115 (29%), Positives = 60/115 (52%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNED-EQTNSQVIQ-VNLII 68
++ VDDS R LI+ L ++ Y + A G +A E L L + ++ N V + ++ ++
Sbjct: 198 IMVVDDSAFIRSLIQDTLSSAGYNIIACKDGGEAHEKLMELKQAAKEENVPVSELIDAVV 257
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
TD MP M G L++++++ S +P+V+ SS + L GA + KP
Sbjct: 258 TDVEMPRMDGMHLIKRLRDDDSYSSMPIVMFSSLMSDDNRAKALALGANDTLTKP 312
>UNIPROTKB|Q48ND2 [details] [associations]
symbol:cheY1 "Chemotaxis protein CheY" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_273089.1
ProteinModelPortal:Q48ND2 STRING:Q48ND2 GeneID:3556464
KEGG:psp:PSPPH_0807 PATRIC:19970685 OMA:KLANYKF
ProtClustDB:CLSK642719 Uniprot:Q48ND2
Length = 122
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 42/126 (33%), Positives = 67/126 (53%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS R+++ LK++ Y V G AL G L + V+LII+D
Sbjct: 5 VLVVDDSSSVRQVVGIALKSAGYDVIEACDGKDAL---GKLTGQK--------VHLIISD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ----L 126
MP M G ++++K+ AS K P++++++E+ S+ GA+ + +KP Q L
Sbjct: 54 VNMPNMDGITFVKEVKKLASYKFTPIIMLTTESQESKKAEGQAAGAKAWVVKPFQPAQML 113
Query: 127 ADVNKL 132
A V+KL
Sbjct: 114 AAVSKL 119
>UNIPROTKB|Q9KQD5 [details] [associations]
symbol:VC_2065 "Chemotaxis protein CheY" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413
OMA:GHYDFLV HSSP:P06143 PIR:C82123 RefSeq:NP_231697.1
ProteinModelPortal:Q9KQD5 SMR:Q9KQD5 DNASU:2613445 GeneID:2613445
KEGG:vch:VC2065 PATRIC:20083164 ProtClustDB:CLSK874661
Uniprot:Q9KQD5
Length = 130
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTA-VDSGNKALEFLGLLNEDEQTNS 59
M + + +L VDD R++++ LL+ + T D G AL +L + +
Sbjct: 1 MEAILNKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALP---MLKKGD---- 53
Query: 60 QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEF 119
+ ++TD+ MPGM G DLL+ I+ LK +PV+++++E +I + G +
Sbjct: 54 ----FDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGY 109
Query: 120 FLKPVQLADVNK 131
+KP A + +
Sbjct: 110 IVKPFTAATLKE 121
>TIGR_CMR|VC_2065 [details] [associations]
symbol:VC_2065 "chemotaxis protein CheY" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413 OMA:GHYDFLV
HSSP:P06143 PIR:C82123 RefSeq:NP_231697.1 ProteinModelPortal:Q9KQD5
SMR:Q9KQD5 DNASU:2613445 GeneID:2613445 KEGG:vch:VC2065
PATRIC:20083164 ProtClustDB:CLSK874661 Uniprot:Q9KQD5
Length = 130
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTA-VDSGNKALEFLGLLNEDEQTNS 59
M + + +L VDD R++++ LL+ + T D G AL +L + +
Sbjct: 1 MEAILNKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALP---MLKKGD---- 53
Query: 60 QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEF 119
+ ++TD+ MPGM G DLL+ I+ LK +PV+++++E +I + G +
Sbjct: 54 ----FDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGY 109
Query: 120 FLKPVQLADVNK 131
+KP A + +
Sbjct: 110 IVKPFTAATLKE 121
>TIGR_CMR|GSU_2046 [details] [associations]
symbol:GSU_2046 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:NP_953095.1
ProteinModelPortal:Q74BJ5 GeneID:2687978 KEGG:gsu:GSU2046
PATRIC:22026953 HOGENOM:HOG000129743 OMA:IVWEVVP
ProtClustDB:CLSK828706 BioCyc:GSUL243231:GH27-1956-MONOMER
Uniprot:Q74BJ5
Length = 404
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 35/130 (26%), Positives = 70/130 (53%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DDSI +K++ + +++T VD+G+ ALE ++ + ++++ D
Sbjct: 5 LLLADDSITIQKVVGIIFANEDFELTVVDNGDAALE-----------KARESRPDVMLID 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD-V 129
MPG GY++ +++ +LK+ P+++M+ P +R + GA++F KP + V
Sbjct: 54 ALMPGSNGYEVCAAVRQDPALKNTPLLLMTGAFEPFDEDRARQCGADDFISKPFESQQLV 113
Query: 130 NKLKPHLMKG 139
+K+K L G
Sbjct: 114 DKVKELLALG 123
>TIGR_CMR|SPO_1953 [details] [associations]
symbol:SPO_1953 "phosphate regulon transcriptional
regulatory protein PhoB" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0006817 "phosphate ion transport" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 InterPro:IPR011879
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0006817 HOGENOM:HOG000034819 KO:K07657
TIGRFAMs:TIGR02154 RefSeq:YP_167188.1 ProteinModelPortal:Q5LS17
GeneID:3193549 KEGG:sil:SPO1953 PATRIC:23377237 OMA:STLMEKP
ProtClustDB:CLSK933701 Uniprot:Q5LS17
Length = 229
Score = 132 (51.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/119 (26%), Positives = 67/119 (56%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+D + R+++ L+ ++V ++G +A+ LL DE T ++I+ D
Sbjct: 8 VLVVEDEMAQREVLAYNLEAEGFRVIRAENGEEAM----LL-VDEDTP------DIIVLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
+ MP ++G ++ R++K + IPV+++S+ + R LE GA+++ +KP + ++
Sbjct: 57 WMMPNLSGIEVCRRLKTRPETRSIPVIMLSARSEEVDKVRGLETGADDYVVKPYSVVEL 115
>TIGR_CMR|GSU_2219 [details] [associations]
symbol:GSU_2219 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 HSSP:P08402
RefSeq:NP_953268.1 ProteinModelPortal:Q74AY0 GeneID:2685652
KEGG:gsu:GSU2219 PATRIC:22027293 OMA:VMLTAKK ProtClustDB:CLSK828762
BioCyc:GSUL243231:GH27-2166-MONOMER Uniprot:Q74AY0
Length = 123
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+D KL LL + Y V V G AL+++ D LII D
Sbjct: 6 ILIVEDEESLLKLESILLSSRGYAVAGVTDGKSALDYIAATPPD-----------LIILD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
+PGM G+++ + IK S + IPVV+++++ ++ LE GA + KP + A +
Sbjct: 55 IMLPGMDGFEVCQMIKADPSTRHIPVVMLTAKKSTQDRDKGLEAGASAYVTKPFKSARI 113
>TIGR_CMR|SPO_0022 [details] [associations]
symbol:SPO_0022 "response regulator" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR001932 Pfam:PF00072 Pfam:PF07228 PROSITE:PS50110
SMART:SM00331 SMART:SM00448 GO:GO:0003824 GO:GO:0006355
GO:GO:0035556 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008152
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
SUPFAM:SSF81606 RefSeq:YP_165295.1 ProteinModelPortal:Q5LWH9
GeneID:3194721 KEGG:sil:SPO0022 PATRIC:23373275
HOGENOM:HOG000291805 OMA:ERKWGDL ProtClustDB:CLSK933114
Uniprot:Q5LWH9
Length = 445
Score = 138 (53.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 32/114 (28%), Positives = 62/114 (54%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS + R+++ LK ++V +SG +A+E D L+++D
Sbjct: 43 VLVVDDSRLQRRILSSSLKKWGFEVIEAESGEEAMEICARAMPD-----------LVLSD 91
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+ MPGM+G D ++ S + ++++S++ + + + L+ GA++F +KPV
Sbjct: 92 WVMPGMSGVDFCEAFRQLNSDRYCYFILLTSKSEKNEVAQGLDAGADDFLIKPV 145
>UNIPROTKB|Q9KRI8 [details] [associations]
symbol:VC_1653 "Sensory box sensor histidine
kinase/response regulator VieS" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=ISS] [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0023014 "signal transduction
by phosphorylation" evidence=ISS] [GO:0035556 "intracellular signal
transduction" evidence=ISS] InterPro:IPR000014 InterPro:IPR001638
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00497 Pfam:PF00512 Pfam:PF01627 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50894 SMART:SM00062
SMART:SM00073 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005215
GO:GO:0030288 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 KO:K07679 HSSP:Q56310
PIR:A82174 RefSeq:NP_231290.1 ProteinModelPortal:Q9KRI8
DNASU:2613784 GeneID:2613784 KEGG:vch:VC1653 PATRIC:20082368
OMA:IGCTANA ProtClustDB:CLSK874479 Uniprot:Q9KRI8
Length = 1146
Score = 142 (55.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 42/125 (33%), Positives = 62/125 (49%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
Q HVL DD I+R LI++ L T V G +A E L E Q +L+
Sbjct: 917 QGHVLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPE---------QYDLL 967
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITD MP + G+ L RK+K+ SL VV ++E+ + L+ G ++ KP LA
Sbjct: 968 ITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTAEDSRLAAEQALQAGMDKVIYKPYTLA 1027
Query: 128 DVNKL 132
++ K+
Sbjct: 1028 NLRKV 1032
>TIGR_CMR|VC_1653 [details] [associations]
symbol:VC_1653 "sensory box sensor histidine
kinase/response regulator VieS" species:686 "Vibrio cholerae O1
biovar El Tor" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR001638 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00497 Pfam:PF00512
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50894 SMART:SM00062 SMART:SM00073 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005215 GO:GO:0030288 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07679 HSSP:Q56310 PIR:A82174 RefSeq:NP_231290.1
ProteinModelPortal:Q9KRI8 DNASU:2613784 GeneID:2613784
KEGG:vch:VC1653 PATRIC:20082368 OMA:IGCTANA ProtClustDB:CLSK874479
Uniprot:Q9KRI8
Length = 1146
Score = 142 (55.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 42/125 (33%), Positives = 62/125 (49%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
Q HVL DD I+R LI++ L T V G +A E L E Q +L+
Sbjct: 917 QGHVLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPE---------QYDLL 967
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITD MP + G+ L RK+K+ SL VV ++E+ + L+ G ++ KP LA
Sbjct: 968 ITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTAEDSRLAAEQALQAGMDKVIYKPYTLA 1027
Query: 128 DVNKL 132
++ K+
Sbjct: 1028 NLRKV 1032
>TIGR_CMR|CJE_1261 [details] [associations]
symbol:CJE_1261 "chemotaxis protein CheY" species:195099
"Campylobacter jejuni RM1221" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413
OMA:DVLITDW ProtClustDB:CLSK872349 RefSeq:YP_179249.1
ProteinModelPortal:Q5HTY6 STRING:Q5HTY6 GeneID:3231768
KEGG:cjr:CJE1261 PATRIC:20044318
BioCyc:CJEJ195099:GJC0-1287-MONOMER Uniprot:Q5HTY6
Length = 130
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 32/114 (28%), Positives = 61/114 (53%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L VDDS R++I+ L + V + G +A + L NED V ++IT
Sbjct: 3 LLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLL-TKNED---------VKVLIT 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D+ MP M G +L++K++ +D+P++++++E + + L+ G + +KP
Sbjct: 53 DWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>UNIPROTKB|Q0BZW4 [details] [associations]
symbol:pleD "Response regulator PleD" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0006355
GO:GO:0005622 GO:GO:0004871 SUPFAM:SSF55073 GO:GO:0016849
GO:GO:0009190 InterPro:IPR000160 SMART:SM00267 TIGRFAMs:TIGR00254
PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG3706 EMBL:CP000158 GenomeReviews:CP000158_GR KO:K02488
HOGENOM:HOG000167204 RefSeq:YP_760979.1 ProteinModelPortal:Q0BZW4
STRING:Q0BZW4 GeneID:4287816 KEGG:hne:HNE_2284 PATRIC:32217411
OMA:APRTINA BioCyc:HNEP228405:GI69-2306-MONOMER Uniprot:Q0BZW4
Length = 455
Score = 135 (52.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 43/160 (26%), Positives = 78/160 (48%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD +R+L++ L+ + V ++G +ALE ++ N ++I + D
Sbjct: 5 ILVVDDIEANRRLLQAKLEAQYHTVLMAENGPQALEVA------QRENPEII-----LLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPVQLADV 129
MPGM GY++ +++K + IPVV++++ + R+ + L GAE+F KPV +
Sbjct: 54 VMMPGMDGYEVCQRLKADPTTSYIPVVMVTALSEMEDRV-KGLAAGAEDFLTKPVDDFLL 112
Query: 130 NKLKPHLMK--GISXXXXXXXXXXXXXXGLEEI--DSADR 165
N LM+ ++ +EE+ D DR
Sbjct: 113 NSRITALMRYNTVASELRQREASGIRSGAMEELNRDEVDR 152
>UNIPROTKB|Q747K4 [details] [associations]
symbol:GSU3261 "Response regulator, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0035556 "intracellular signal transduction" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034820 HSSP:P10957 RefSeq:NP_954302.1
ProteinModelPortal:Q747K4 GeneID:2686384 KEGG:gsu:GSU3261
PATRIC:22029363 OMA:KLPRIDG ProtClustDB:CLSK743192
BioCyc:GSUL243231:GH27-3237-MONOMER Uniprot:Q747K4
Length = 150
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSY--QVTAVDSGNKALEFL-GLLNEDEQTNSQVIQVNLI 67
+L V+D+ D L R L + VT V G +AL+FL G + ++ S I L+
Sbjct: 6 ILLVEDNPDDEVLTLRALGKHAITPDVTVVRDGVEALDFLFGTGSYSDRDLS--IMPKLV 63
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+ D +P + G ++LR+++ + +PVV+ +S N I C GA + KPV
Sbjct: 64 LLDLKLPKVDGLEVLRRLRADQRTRLLPVVVFTSSNEEQDILECHNLGANSYIRKPV--- 120
Query: 128 DVNKLKPHL 136
D N+L L
Sbjct: 121 DFNQLSEAL 129
>UNIPROTKB|Q7D1A8 [details] [associations]
symbol:cheY "Chemotaxis receiver protein" species:176299
"Agrobacterium fabrum str. C58" [GO:0006928 "cellular component
movement" evidence=IGC] [GO:0052143 "chemotaxis on or near host
involved in symbiotic interaction" evidence=IGC] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0006928 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 EMBL:AE007869 GenomeReviews:AE007869_GR
GO:GO:0052143 KO:K03413 ProtClustDB:CLSK881447 HSSP:P06143
RefSeq:NP_353545.1 ProteinModelPortal:Q7D1A8 STRING:Q7D1A8
GeneID:1132554 KEGG:atu:Atu0516 PATRIC:20810735 OMA:KNDRYRA
Uniprot:Q7D1A8
Length = 121
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 31/113 (27%), Positives = 58/113 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS R ++ L + ++ + G + LE L EQ+N VI +TD
Sbjct: 5 VLTVDDSRTIRNMLLVTLNNAGFETIQAEDGIEGLEVL------EQSNPDVI-----VTD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP + G+ + ++ + + IP++++++E+ + NR + GA + +KP
Sbjct: 54 INMPRLDGFGFIEGVRRNEKYRAIPILVLTTESDAEKKNRARQAGATGWIVKP 106
>TIGR_CMR|GSU_3261 [details] [associations]
symbol:GSU_3261 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 HSSP:P10957
RefSeq:NP_954302.1 ProteinModelPortal:Q747K4 GeneID:2686384
KEGG:gsu:GSU3261 PATRIC:22029363 OMA:KLPRIDG ProtClustDB:CLSK743192
BioCyc:GSUL243231:GH27-3237-MONOMER Uniprot:Q747K4
Length = 150
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSY--QVTAVDSGNKALEFL-GLLNEDEQTNSQVIQVNLI 67
+L V+D+ D L R L + VT V G +AL+FL G + ++ S I L+
Sbjct: 6 ILLVEDNPDDEVLTLRALGKHAITPDVTVVRDGVEALDFLFGTGSYSDRDLS--IMPKLV 63
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+ D +P + G ++LR+++ + +PVV+ +S N I C GA + KPV
Sbjct: 64 LLDLKLPKVDGLEVLRRLRADQRTRLLPVVVFTSSNEEQDILECHNLGANSYIRKPV--- 120
Query: 128 DVNKLKPHL 136
D N+L L
Sbjct: 121 DFNQLSEAL 129
>NCBI_NP|NP_353545.1 [details] [associations]
symbol:cheY "chemotaxisreceiverprotein" species:176299
"Agrobacterium fabrum str. C58" [GO:0052143 "chemotaxis on or near
host involved in symbiotic interaction" evidence=IGC] [GO:0006928
"cellular component movement" evidence=IGC] REFSEQ:NC_003062
Ncbi:NP_353545
Length = 121
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 31/113 (27%), Positives = 58/113 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS R ++ L + ++ + G + LE L EQ+N VI +TD
Sbjct: 5 VLTVDDSRTIRNMLLVTLNNAGFETIQAEDGIEGLEVL------EQSNPDVI-----VTD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP + G+ + ++ + + IP++++++E+ + NR + GA + +KP
Sbjct: 54 INMPRLDGFGFIEGVRRNEKYRAIPILVLTTESDAEKKNRARQAGATGWIVKP 106
>TIGR_CMR|BA_0996 [details] [associations]
symbol:BA_0996 "sensor histidine kinase/response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR003018 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF02518 Pfam:PF13185 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 SMART:SM00065 SMART:SM00304 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0005622
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 KO:K03407
HSSP:P52934 RefSeq:NP_843497.1 RefSeq:YP_017624.1
RefSeq:YP_027206.1 ProteinModelPortal:Q81U88 DNASU:1088076
EnsemblBacteria:EBBACT00000011936 EnsemblBacteria:EBBACT00000016656
EnsemblBacteria:EBBACT00000023286 GeneID:1088076 GeneID:2814798
GeneID:2849014 KEGG:ban:BA_0996 KEGG:bar:GBAA_0996 KEGG:bat:BAS0932
HOGENOM:HOG000084747 OMA:TNNVFQE ProtClustDB:CLSK916050
BioCyc:BANT260799:GJAJ-1010-MONOMER
BioCyc:BANT261594:GJ7F-1055-MONOMER InterPro:IPR007891 Pfam:PF05227
Uniprot:Q81U88
Length = 896
Score = 136 (52.9 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ VDD + ++ LK + +G + LE L TN ++LI+ D
Sbjct: 778 IMIVDDDHRNIFALQNALKKQHANIITAQNGLECLEIL-----KNNTN-----IDLILMD 827
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
MP M GY+ + I+ + L +IP++ ++++ +P+ +CL GA ++ KP+ L
Sbjct: 828 IMMPNMDGYETMEHIRMNLGLHEIPIIALTAKAMPNDKEKCLSAGASDYISKPLNL 883
>TIGR_CMR|APH_0551 [details] [associations]
symbol:APH_0551 "response regulator/GGDEF domain protein"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
EMBL:CP000235 GenomeReviews:CP000235_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG3706 KO:K02488 HOGENOM:HOG000167204
ProtClustDB:PRK09581 RefSeq:YP_505143.1 ProteinModelPortal:Q2GKF8
STRING:Q2GKF8 GeneID:3930248 KEGG:aph:APH_0551 PATRIC:20949762
OMA:VERENDF BioCyc:APHA212042:GHPM-575-MONOMER Uniprot:Q2GKF8
Length = 456
Score = 132 (51.5 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 38/126 (30%), Positives = 70/126 (55%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + KL++ L Y V SG +A+ + E+ Q + LI+ D
Sbjct: 5 ILIVDDLPSNIKLLQAKLTAEYYTVITATSGPEAIR----MAEEHQPD-------LILLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPS-RINRCLEEGAEEFFLKPVQ-LA 127
MPGM GY+ + ++ + ++ IP+V++++ +N S R+N L GA++F +KP+ +A
Sbjct: 54 VMMPGMDGYETCKNMRTNPAIAYIPIVMVTALDNTTSNRVNG-LSAGADDFLIKPIDDVA 112
Query: 128 DVNKLK 133
+++K
Sbjct: 113 LFSRIK 118
>UNIPROTKB|Q8EEQ6 [details] [associations]
symbol:cheY "Chemotaxis signal transduction system response
regulator CheY" species:211586 "Shewanella oneidensis MR-1"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 OMA:KLANYKF
HSSP:P06143 RefSeq:NP_717910.1 ProteinModelPortal:Q8EEQ6
GeneID:1170042 KEGG:son:SO_2318 PATRIC:23524259 Uniprot:Q8EEQ6
Length = 121
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS R ++ L+ + Y+V G AL LN D+ +NLII+D
Sbjct: 4 ILVVDDSASIRHVVSIALRGAGYEVIDACDGKDALS---KLNGDK--------INLIISD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MP M G L+++K+ K PV+++++E ++ GA+ + +KP Q
Sbjct: 53 VNMPNMDGISFLKEVKKHPRYKFTPVIMLTTEAGRDKMEEGRMAGAKAWVVKPFQ 107
>TIGR_CMR|GSU_1117 [details] [associations]
symbol:GSU_1117 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 HSSP:P06143
RefSeq:NP_952170.1 ProteinModelPortal:Q74E47 GeneID:2686890
KEGG:gsu:GSU1117 PATRIC:22024996 OMA:ASNVIMI ProtClustDB:CLSK828188
BioCyc:GSUL243231:GH27-1119-MONOMER Uniprot:Q74E47
Length = 127
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 37/128 (28%), Positives = 66/128 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD R + +LL+ ++V +V +G +AL +L Q +VN+I+TD
Sbjct: 9 ILVVDDEENARIGLTKLLEREGFEVASVSNGFEALNYL-----------QQREVNVIVTD 57
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G LR++ +S ++ ++I + + S I + GA E+ KPV+L ++
Sbjct: 58 INMPEMNGITFLRELNKSFPRSNV-IMITAYGGVESYIE-AMNLGAFEYINKPVKLDELK 115
Query: 131 KLKPHLMK 138
+ + K
Sbjct: 116 SILTKIFK 123
>TIGR_CMR|SO_2318 [details] [associations]
symbol:SO_2318 "chemotaxis protein CheY" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
OMA:KLANYKF HSSP:P06143 RefSeq:NP_717910.1
ProteinModelPortal:Q8EEQ6 GeneID:1170042 KEGG:son:SO_2318
PATRIC:23524259 Uniprot:Q8EEQ6
Length = 121
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS R ++ L+ + Y+V G AL LN D+ +NLII+D
Sbjct: 4 ILVVDDSASIRHVVSIALRGAGYEVIDACDGKDALS---KLNGDK--------INLIISD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MP M G L+++K+ K PV+++++E ++ GA+ + +KP Q
Sbjct: 53 VNMPNMDGISFLKEVKKHPRYKFTPVIMLTTEAGRDKMEEGRMAGAKAWVVKPFQ 107
>UNIPROTKB|Q48GB2 [details] [associations]
symbol:PSPPH_3413 "Chemotaxis protein CheV, putative"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 InterPro:IPR002545
Pfam:PF00072 Pfam:PF01584 PROSITE:PS50110 PROSITE:PS50851
SMART:SM00260 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 EMBL:CP000058
GenomeReviews:CP000058_GR SUPFAM:SSF50341 eggNOG:COG0835
HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181 PIRSF:PIRSF002867
RefSeq:YP_275571.1 ProteinModelPortal:Q48GB2 STRING:Q48GB2
GeneID:3556331 KEGG:psp:PSPPH_3413 PATRIC:19976236 OMA:QVSRCLQ
ProtClustDB:CLSK2299194 Uniprot:Q48GB2
Length = 308
Score = 128 (50.1 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 36/122 (29%), Positives = 67/122 (54%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFL-GLLNEDEQTNSQVIQVNLIIT 69
VL VDDS + RK + R L+T +V A++ G +AL++L ++ E ++ + + ++I+
Sbjct: 181 VLTVDDSSVARKQVSRCLETVGVEVVALNDGRQALDYLLKMVAEGKKPEEEFL---MMIS 237
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE--GAEEFFLK--PVQ 125
D MP M GY L I+ ++ + + + +S + N+ + + GA++F K P
Sbjct: 238 DIEMPEMDGYTLTAAIRNDPRMQKMHITLHTS--LSGVFNQAMVKKVGADDFLAKFRPDD 295
Query: 126 LA 127
LA
Sbjct: 296 LA 297
>TIGR_CMR|GSU_0879 [details] [associations]
symbol:GSU_0879 "chemotaxis protein CheV" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341 KO:K03415
OMA:AKWIGIV InterPro:IPR024181 PIRSF:PIRSF002867 HSSP:P04042
RefSeq:NP_951936.1 ProteinModelPortal:Q74ET0 DNASU:2687281
GeneID:2687281 KEGG:gsu:GSU0879 PATRIC:22024521
HOGENOM:HOG000255028 ProtClustDB:CLSK828077
BioCyc:GSUL243231:GH27-857-MONOMER Uniprot:Q74ET0
Length = 312
Score = 128 (50.1 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 45/143 (31%), Positives = 66/143 (46%)
Query: 2 GMVTD-SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
G V D SQ +L DDS R I L+ + Y V ++G A + +D+ T +
Sbjct: 174 GPVLDRSQRRILVADDSAFIRNSICSSLRGAGYNVDEAENGEDAWNMI----QDKLTRCR 229
Query: 61 VIQVNL------IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE 114
VNL +ITD MP M G L +K+ LKD+PV+I SS + +
Sbjct: 230 AAGVNLRSELDLLITDVEMPKMDGLHLTTLVKKDDVLKDLPVLIFSSLASDDNKRKWKDL 289
Query: 115 GAEEFFLKPVQLADVNKLKPHLM 137
GA + KP L ++ K+ +M
Sbjct: 290 GALDIVTKP-DLPNLVKIADSVM 311
>TIGR_CMR|GSU_0598 [details] [associations]
symbol:GSU_0598 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PROSITE:PS50045
PROSITE:PS50110 SMART:SM00382 SMART:SM00448 GO:GO:0005524
GO:GO:0035556 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 HSSP:P06143
RefSeq:NP_951656.1 ProteinModelPortal:Q74FK9 GeneID:2688651
KEGG:gsu:GSU0598 PATRIC:22023947 OMA:SGMEVLK ProtClustDB:CLSK827940
BioCyc:GSUL243231:GH27-583-MONOMER Uniprot:Q74FK9
Length = 470
Score = 131 (51.2 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 38/113 (33%), Positives = 58/113 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD I R+ + R+L+ Y V SG ALE L +DE L+ITD
Sbjct: 6 VLVVDDEAIIREGLRRILEKEGYHVETSASGQIALERL----QDEN-------YGLVITD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MPGM+G ++L+ IK ++PV+I++ + ++ GA ++ KP
Sbjct: 55 LKMPGMSGMEVLKAIK--VLQPEVPVIIITGFSTVDTAVEAMKNGAFDYIAKP 105
>UNIPROTKB|Q7Y0W3 [details] [associations]
symbol:Q7Y0W3 "Two-component response regulator EHD1"
species:39946 "Oryza sativa Indica Group" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0048576 "positive regulation of short-day
photoperiodism, flowering" evidence=IMP] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
eggNOG:NOG265546 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB092508
ProteinModelPortal:Q7Y0W3 SMR:Q7Y0W3 KEGG:dosa:Os10t0463400-01
Gramene:Q7Y0W3 HOGENOM:HOG000084878 GO:GO:0048576 Uniprot:Q7Y0W3
Length = 341
Score = 128 (50.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 38/128 (29%), Positives = 69/128 (53%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL +DD ++E LL SY+VT + +A+ F+ L+ N Q+ V+L+I+D
Sbjct: 13 VLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFI--LD-----NPQI--VDLVISD 63
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
P G +L+++ S IP VIM+S + + + + GA +F LKPV++ +++
Sbjct: 64 AFFPTEDGLLILQEV---TSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELS 120
Query: 131 KLKPHLMK 138
+ H+ +
Sbjct: 121 NIWQHIFR 128
>UNIPROTKB|Q7Y0W5 [details] [associations]
symbol:EHD1 "Two-component response regulator EHD1"
species:39947 "Oryza sativa Japonica Group" [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:DP000086 EMBL:CM000147 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
InterPro:IPR017053 PIRSF:PIRSF036392 GO:GO:0048576 EMBL:AB092506
EMBL:AB092507 EMBL:AC027038 ProteinModelPortal:Q7Y0W5
Gramene:Q7Y0W5 eggNOG:KOG1601 Uniprot:Q7Y0W5
Length = 341
Score = 128 (50.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 38/128 (29%), Positives = 69/128 (53%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL +DD ++E LL SY+VT + +A+ F+ L+ N Q+ V+L+I+D
Sbjct: 13 VLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFI--LD-----NPQI--VDLVISD 63
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
P G +L+++ S IP VIM+S + + + + GA +F LKPV++ +++
Sbjct: 64 AFFPTEDGLLILQEV---TSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELS 120
Query: 131 KLKPHLMK 138
+ H+ +
Sbjct: 121 NIWQHIFR 128
>UNIPROTKB|Q9KSB1 [details] [associations]
symbol:VC_1348 "Response regulator" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0000156 "phosphorelay
response regulator activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0035556
"intracellular signal transduction" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003607 InterPro:IPR006674
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 SMART:SM00471
GO:GO:0006355 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008152 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0008081 Gene3D:1.10.3210.10 HSSP:Q9A5I4
KO:K07814 PIR:G82211 RefSeq:NP_230992.1 ProteinModelPortal:Q9KSB1
DNASU:2614802 GeneID:2614802 KEGG:vch:VC1348 PATRIC:20081772
OMA:DNPRSRH ProtClustDB:CLSK794088 Uniprot:Q9KSB1
Length = 441
Score = 129 (50.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
M M SQ +L VDDS + + + L Y++ A SG ALE L +Q
Sbjct: 63 MSMEDLSQCTILIVDDSPDNIAFMSQGL-AQYYRIKAARSGKVALEIL----------AQ 111
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
++L++ D MP M+GY+++ +IK + + IPV+ ++ ++ P E GA ++
Sbjct: 112 Y-PIDLVLLDIVMPEMSGYEVINQIKHNPHTEHIPVIFLTGKSNPEDEQLGFELGAVDYV 170
Query: 121 LKPVQLADV-NKLKPHL 136
KPV + + +++ HL
Sbjct: 171 FKPVSIPLLKSRVHTHL 187
>TIGR_CMR|VC_1348 [details] [associations]
symbol:VC_1348 "response regulator" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003607 InterPro:IPR006674 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 SMART:SM00471 GO:GO:0006355 GO:GO:0046872
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008152 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0008081
Gene3D:1.10.3210.10 HSSP:Q9A5I4 KO:K07814 PIR:G82211
RefSeq:NP_230992.1 ProteinModelPortal:Q9KSB1 DNASU:2614802
GeneID:2614802 KEGG:vch:VC1348 PATRIC:20081772 OMA:DNPRSRH
ProtClustDB:CLSK794088 Uniprot:Q9KSB1
Length = 441
Score = 129 (50.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
M M SQ +L VDDS + + + L Y++ A SG ALE L +Q
Sbjct: 63 MSMEDLSQCTILIVDDSPDNIAFMSQGL-AQYYRIKAARSGKVALEIL----------AQ 111
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
++L++ D MP M+GY+++ +IK + + IPV+ ++ ++ P E GA ++
Sbjct: 112 Y-PIDLVLLDIVMPEMSGYEVINQIKHNPHTEHIPVIFLTGKSNPEDEQLGFELGAVDYV 170
Query: 121 LKPVQLADV-NKLKPHL 136
KPV + + +++ HL
Sbjct: 171 FKPVSIPLLKSRVHTHL 187
>UNIPROTKB|Q8EF67 [details] [associations]
symbol:cheY "Chemotaxis signal transduction system response
regulator CheY" species:211586 "Shewanella oneidensis MR-1"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P06143
OMA:FDVTEAC RefSeq:NP_717723.1 ProteinModelPortal:Q8EF67
GeneID:1169863 KEGG:son:SO_2120 PATRIC:23523858
ProtClustDB:CLSK906601 Uniprot:Q8EF67
Length = 121
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 32/113 (28%), Positives = 60/113 (53%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS R+++E LK+++YQVT G +AL+ +SQ + + I+TD
Sbjct: 5 ILIVDDSAAIRQMVEATLKSANYQVTLAKDGREALDLC---------SSQ--RFDFILTD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M G L++ ++ ++ P++++++E + GA + +KP
Sbjct: 54 QNMPRMDGLTLIKSLRGMSAFMRTPIIMLTTEAGDDMKAQGKAVGATGWMVKP 106
>TIGR_CMR|SO_2120 [details] [associations]
symbol:SO_2120 "chemotaxis protein CheY" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
HSSP:P06143 OMA:FDVTEAC RefSeq:NP_717723.1
ProteinModelPortal:Q8EF67 GeneID:1169863 KEGG:son:SO_2120
PATRIC:23523858 ProtClustDB:CLSK906601 Uniprot:Q8EF67
Length = 121
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 32/113 (28%), Positives = 60/113 (53%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS R+++E LK+++YQVT G +AL+ +SQ + + I+TD
Sbjct: 5 ILIVDDSAAIRQMVEATLKSANYQVTLAKDGREALDLC---------SSQ--RFDFILTD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M G L++ ++ ++ P++++++E + GA + +KP
Sbjct: 54 QNMPRMDGLTLIKSLRGMSAFMRTPIIMLTTEAGDDMKAQGKAVGATGWMVKP 106
>UNIPROTKB|Q3ADB1 [details] [associations]
symbol:cheY1 "Chemotaxis protein CheY" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 RefSeq:YP_359873.1 ProteinModelPortal:Q3ADB1
STRING:Q3ADB1 GeneID:3728270 KEGG:chy:CHY_1026 PATRIC:21275187
OMA:GATAWIT BioCyc:CHYD246194:GJCN-1025-MONOMER Uniprot:Q3ADB1
Length = 120
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/113 (29%), Positives = 59/113 (52%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+LA+DDS + I+ L +QV G++AL+ LG E + +LIITD
Sbjct: 4 ILALDDSATMLQSIKISLLRKGHQVATFTKGSEALDMLG--KE---------KFDLIITD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M G ++K++ ++ K PV+++++E+ ++ + GA + KP
Sbjct: 53 LNMPEMDGITFIQKVRALSNYKFTPVIVLTTESQAAKKEQARRAGATAWITKP 105
>TIGR_CMR|CHY_1026 [details] [associations]
symbol:CHY_1026 "chemotaxis protein CheY" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 RefSeq:YP_359873.1
ProteinModelPortal:Q3ADB1 STRING:Q3ADB1 GeneID:3728270
KEGG:chy:CHY_1026 PATRIC:21275187 OMA:GATAWIT
BioCyc:CHYD246194:GJCN-1025-MONOMER Uniprot:Q3ADB1
Length = 120
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/113 (29%), Positives = 59/113 (52%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+LA+DDS + I+ L +QV G++AL+ LG E + +LIITD
Sbjct: 4 ILALDDSATMLQSIKISLLRKGHQVATFTKGSEALDMLG--KE---------KFDLIITD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M G ++K++ ++ K PV+++++E+ ++ + GA + KP
Sbjct: 53 LNMPEMDGITFIQKVRALSNYKFTPVIVLTTESQAAKKEQARRAGATAWITKP 105
>TAIR|locus:2061971 [details] [associations]
symbol:CKI1 "CYTOKININ-INDEPENDENT 1" species:3702
"Arabidopsis thaliana" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=IEA] [GO:0000156 "phosphorelay response
regulator activity" evidence=IEA;TAS] [GO:0000160 "phosphorelay
signal transduction system" evidence=IEA] [GO:0004673 "protein
histidine kinase activity" evidence=IEA;ISS;IDA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0018106 "peptidyl-histidine phosphorylation" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=TAS] [GO:0010087 "phloem or
xylem histogenesis" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0080117 "secondary
growth" evidence=IMP] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 GO:GO:0042803
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0009736 GO:GO:0023014 GO:GO:0010087
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0004673
GO:GO:0080117 GO:GO:0009553 EMBL:AC002535 EMBL:D87545 EMBL:EF598269
EMBL:EF598270 EMBL:EF598271 EMBL:EF598272 EMBL:EF598273
EMBL:EF598274 EMBL:EF598275 EMBL:EF598276 EMBL:EF598277
EMBL:EF598278 EMBL:EF598279 EMBL:EF598280 EMBL:EF598281
EMBL:EF598282 EMBL:EF598283 EMBL:EF598284 EMBL:EF598285
EMBL:EF598286 EMBL:EF598287 EMBL:EF598288 EMBL:EF598289
EMBL:EF598290 EMBL:EF598291 IPI:IPI00546838 PIR:T00441
RefSeq:NP_182265.1 UniGene:At.341 PDB:3MM4 PDB:3MMN PDBsum:3MM4
PDBsum:3MMN ProteinModelPortal:O22267 SMR:O22267 IntAct:O22267
STRING:O22267 PaxDb:O22267 PRIDE:O22267 EnsemblPlants:AT2G47430.1
GeneID:819356 KEGG:ath:AT2G47430 TAIR:At2g47430
HOGENOM:HOG000114067 InParanoid:O22267 OMA:CPSSREL PhylomeDB:O22267
ProtClustDB:CLSN2913155 Genevestigator:O22267 Uniprot:O22267
Length = 1122
Score = 130 (50.8 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 41/127 (32%), Positives = 67/127 (52%)
Query: 11 VLAVDDSIIDRKLIE-RLLKTSSYQVTAVDSGNKALEFL--GLLNEDEQTNSQVIQVNLI 67
VL VDD+ I RK+ +L K +V DSG +AL + GL +EQ + + + I
Sbjct: 988 VLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALRLVTEGLTQREEQGSVDKLPFDYI 1047
Query: 68 ITDYCMPGMTGYDL---LRKIKESASLKDIPVVIMSSENIPSRINR-CLEEGAEEFFLKP 123
D MP M GY+ +RK+++S ++ P++ +S + S R ++ G + F K
Sbjct: 1048 FMDCQMPEMDGYEATREIRKVEKSYGVRT-PIIAVSGHDPGSEEARETIQAGMDAFLDKS 1106
Query: 124 V-QLADV 129
+ QLA+V
Sbjct: 1107 LNQLANV 1113
>UNIPROTKB|Q52879 [details] [associations]
symbol:cheY1 "CheY1" species:382 "Sinorhizobium meliloti"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HSSP:P06657 HOGENOM:HOG000034820 EMBL:U13166
GenomeReviews:AL591688_GR PIR:S61833 ProteinModelPortal:Q52879
IntAct:Q52879 PATRIC:23630491 ProtClustDB:CLSK881447 Uniprot:Q52879
Length = 121
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 28/113 (24%), Positives = 57/113 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS R ++ L + ++ + G + LE L N D +I+TD
Sbjct: 5 VLTVDDSRTIRNMLLVTLNNAGFETIQAEDGVEGLEKLDTANPD-----------VIVTD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP + G+ + ++++ + +P++++++E+ + NR + GA + +KP
Sbjct: 54 INMPRLDGFGFIEGVRKNDRYRAVPILVLTTESDAEKKNRARQAGATGWIVKP 106
>UNIPROTKB|Q9KRC3 [details] [associations]
symbol:VC_1719 "DNA-binding response regulator TorR"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072
Pfam:PF00486 PROSITE:PS50110 SMART:SM00448 SMART:SM00862
GO:GO:0006355 GO:GO:0003677 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P08402 KO:K07772
ProtClustDB:PRK10766 PIR:G82164 RefSeq:NP_231355.1
ProteinModelPortal:Q9KRC3 SMR:Q9KRC3 DNASU:2613724 GeneID:2613724
KEGG:vch:VC1719 PATRIC:20082498 OMA:WRISAAR Uniprot:Q9KRC3
Length = 234
Score = 124 (48.7 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 37/133 (27%), Positives = 68/133 (51%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+HVL V+D ++ R + + YQVT +SG + E L L N+ ++L++
Sbjct: 3 YHVLVVEDDLVTRSKLSGYFQNEGYQVTEAESGAQMREALEL-ND----------IDLVL 51
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
D +PG G L R+++ + + I +V +++I + LE GA+++ KPV L +
Sbjct: 52 LDINLPGEDGLLLTRELRSQSEI-GIILVTGRTDSIDKIVG--LEMGADDYVTKPVDLRE 108
Query: 129 VNKLKPHLMKGIS 141
+ +L+ IS
Sbjct: 109 LQVRVKNLLWRIS 121
>TIGR_CMR|VC_1719 [details] [associations]
symbol:VC_1719 "DNA-binding response regulator TorR"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486
PROSITE:PS50110 SMART:SM00448 SMART:SM00862 GO:GO:0006355
GO:GO:0003677 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P08402 KO:K07772
ProtClustDB:PRK10766 PIR:G82164 RefSeq:NP_231355.1
ProteinModelPortal:Q9KRC3 SMR:Q9KRC3 DNASU:2613724 GeneID:2613724
KEGG:vch:VC1719 PATRIC:20082498 OMA:WRISAAR Uniprot:Q9KRC3
Length = 234
Score = 124 (48.7 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 37/133 (27%), Positives = 68/133 (51%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+HVL V+D ++ R + + YQVT +SG + E L L N+ ++L++
Sbjct: 3 YHVLVVEDDLVTRSKLSGYFQNEGYQVTEAESGAQMREALEL-ND----------IDLVL 51
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
D +PG G L R+++ + + I +V +++I + LE GA+++ KPV L +
Sbjct: 52 LDINLPGEDGLLLTRELRSQSEI-GIILVTGRTDSIDKIVG--LEMGADDYVTKPVDLRE 108
Query: 129 VNKLKPHLMKGIS 141
+ +L+ IS
Sbjct: 109 LQVRVKNLLWRIS 121
>DICTYBASE|DDB_G0282377 [details] [associations]
symbol:dhkM "histidine kinase M" species:44689
"Dictyostelium discoideum" [GO:0048102 "autophagic cell death"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0004673 "protein
histidine kinase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR004358
Pfam:PF00072 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
SMART:SM00387 SMART:SM00448 InterPro:IPR005467
dictyBase:DDB_G0282377 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 Gene3D:3.30.565.10 SUPFAM:SSF55874 PROSITE:PS50109
eggNOG:COG0642 GO:GO:0004673 GO:GO:0048102 EMBL:AF362374
RefSeq:XP_640034.1 ProteinModelPortal:Q54SK5
EnsemblProtists:DDB0220020 GeneID:8623560 KEGG:ddi:DDB_G0282377
OMA:NTSTINP Uniprot:Q54SK5
Length = 2388
Score = 132 (51.5 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 34/121 (28%), Positives = 65/121 (53%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
++L V+D++++ K+ +L+ +++V +G A+E + +Q++S +LI+
Sbjct: 2262 NILLVEDNLVNAKIAMTVLRKHNFRVELSKNGQLAMERI------KQSHSSF---DLILM 2312
Query: 70 DYCMP---GMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
D MP G+T L RK + LK +P++ ++++ N CLE G EF KP+
Sbjct: 2313 DIHMPVMDGITCSKLTRKFETEHGLKHLPIIALTADATTGHKNLCLEAGCNEFMSKPLDY 2372
Query: 127 A 127
A
Sbjct: 2373 A 2373
>TIGR_CMR|NSE_0512 [details] [associations]
symbol:NSE_0512 "response regulator/GGDEF domain protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG3706 EMBL:CP000237
GenomeReviews:CP000237_GR KO:K02488 HOGENOM:HOG000167204
ProtClustDB:PRK09581 RefSeq:YP_506396.1 ProteinModelPortal:Q2GDQ0
STRING:Q2GDQ0 GeneID:3931788 KEGG:nse:NSE_0512 PATRIC:22681073
OMA:TELGIND BioCyc:NSEN222891:GHFU-532-MONOMER Uniprot:Q2GDQ0
Length = 456
Score = 126 (49.4 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 35/116 (30%), Positives = 61/116 (52%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + K++E L YQV SG A+E ++ Q ++I+ D
Sbjct: 5 ILVVDDIPSNIKILEIKLTAKYYQVITASSGIAAIEL-----------AKQHQPDVILLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSEN-IPSRINRCLEEGAEEFFLKPVQ 125
MP M G++ R++K + IPV+I+++ N I +++ L GA++F +KP +
Sbjct: 54 VMMPEMDGFETCRRLKSDYATMHIPVIIVTALNDIENKVEG-LNSGADDFLVKPAK 108
>UNIPROTKB|Q9KPC0 [details] [associations]
symbol:VC_2453 "Sensor histidine kinase/response regulator"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0023014 "signal transduction by phosphorylation"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07678 OMA:ANQVISQ ProtClustDB:PRK11107 InterPro:IPR019247
Pfam:PF09984 HSSP:Q9A5I4 PIR:B82075 RefSeq:NP_232082.1
ProteinModelPortal:Q9KPC0 DNASU:2612995 GeneID:2612995
KEGG:vch:VC2453 PATRIC:20083927 Uniprot:Q9KPC0
Length = 927
Score = 127 (49.8 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 34/115 (29%), Positives = 60/115 (52%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
V+AVDD+ + KLI LL+ V + SG +A+E Q S+ Q ++I+ D
Sbjct: 667 VMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIE---------QAQSR--QFDIILMD 715
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MP M G + IK+ +D PV+ +++ + +R L+ G +++ KP++
Sbjct: 716 IQMPHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIE 770
>TIGR_CMR|VC_2453 [details] [associations]
symbol:VC_2453 "sensor histidine kinase/response regulator"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005524 GO:GO:0006355 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
KO:K07678 OMA:ANQVISQ ProtClustDB:PRK11107 InterPro:IPR019247
Pfam:PF09984 HSSP:Q9A5I4 PIR:B82075 RefSeq:NP_232082.1
ProteinModelPortal:Q9KPC0 DNASU:2612995 GeneID:2612995
KEGG:vch:VC2453 PATRIC:20083927 Uniprot:Q9KPC0
Length = 927
Score = 127 (49.8 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 34/115 (29%), Positives = 60/115 (52%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
V+AVDD+ + KLI LL+ V + SG +A+E Q S+ Q ++I+ D
Sbjct: 667 VMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIE---------QAQSR--QFDIILMD 715
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MP M G + IK+ +D PV+ +++ + +R L+ G +++ KP++
Sbjct: 716 IQMPHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIE 770
>TIGR_CMR|GSU_2287 [details] [associations]
symbol:GSU_2287 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820
RefSeq:NP_953336.1 ProteinModelPortal:Q74AR5 GeneID:2686930
KEGG:gsu:GSU2287 PATRIC:22027433 OMA:HERDMEA
BioCyc:GSUL243231:GH27-2270-MONOMER Uniprot:Q74AR5
Length = 136
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 32/132 (24%), Positives = 67/132 (50%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKT--SSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
M + +L V+D+ + L R+LK + ++ V G +AL +L + E+
Sbjct: 1 MAGTEEITMLLVEDNPDEEFLTRRVLKKFPALSRIDVVKDGVEALRYLTVA-ENR----- 54
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+ ++ D +P + G D+LR++++ +DIPVV+++S + + C + GA F
Sbjct: 55 -VPPRFVLLDLKLPRVDGVDVLREMRKREETRDIPVVVLTSSDHERDMEACGKLGAAHFL 113
Query: 121 LKPVQLADVNKL 132
KP+ ++++
Sbjct: 114 QKPLDAGRMSEV 125
>UNIPROTKB|P0AE67 [details] [associations]
symbol:cheY species:83333 "Escherichia coli K-12"
[GO:0006473 "protein acetylation" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0060286 "flagellar cell motility" evidence=TAS]
[GO:0006935 "chemotaxis" evidence=IEA;IMP;TAS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IMP] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA;IDA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005737 GO:GO:0006355 GO:GO:0035556
GO:GO:0000287 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006935 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0000160
PDB:1BDJ PDBsum:1BDJ HOGENOM:HOG000034820 GO:GO:0006473
GO:GO:0060286 PDB:1A0O PDB:1EAY PDB:1FFG PDB:1FFS PDB:1FFW PDB:2LP4
PDBsum:1A0O PDBsum:1EAY PDBsum:1FFG PDBsum:1FFS PDBsum:1FFW
PDBsum:2LP4 EMBL:M13463 EMBL:K02175 PIR:E25195 RefSeq:NP_416396.1
RefSeq:YP_490144.1 PDB:1AB5 PDB:1AB6 PDB:1C4W PDB:1CEY PDB:1CHN
PDB:1CYE PDB:1D4Z PDB:1DJM PDB:1E6K PDB:1E6L PDB:1E6M PDB:1EHC
PDB:1F4V PDB:1FQW PDB:1HEY PDB:1JBE PDB:1KMI PDB:1MIH PDB:1U8T
PDB:1UDR PDB:1VLZ PDB:1YMU PDB:1YMV PDB:1ZDM PDB:2B1J PDB:2ID7
PDB:2ID9 PDB:2IDM PDB:3CHY PDB:3F7N PDB:3FFT PDB:3FFW PDB:3FFX
PDB:3FGZ PDB:3MYY PDB:3OLV PDB:3OLW PDB:3OLX PDB:3OLY PDB:3OO0
PDB:3OO1 PDB:3RVJ PDB:3RVK PDB:3RVL PDB:3RVM PDB:3RVN PDB:3RVO
PDB:3RVP PDB:3RVQ PDB:3RVR PDB:3RVS PDB:5CHY PDB:6CHY PDBsum:1AB5
PDBsum:1AB6 PDBsum:1C4W PDBsum:1CEY PDBsum:1CHN PDBsum:1CYE
PDBsum:1D4Z PDBsum:1DJM PDBsum:1E6K PDBsum:1E6L PDBsum:1E6M
PDBsum:1EHC PDBsum:1F4V PDBsum:1FQW PDBsum:1HEY PDBsum:1JBE
PDBsum:1KMI PDBsum:1MIH PDBsum:1U8T PDBsum:1UDR PDBsum:1VLZ
PDBsum:1YMU PDBsum:1YMV PDBsum:1ZDM PDBsum:2B1J PDBsum:2ID7
PDBsum:2ID9 PDBsum:2IDM PDBsum:3CHY PDBsum:3F7N PDBsum:3FFT
PDBsum:3FFW PDBsum:3FFX PDBsum:3FGZ PDBsum:3MYY PDBsum:3OLV
PDBsum:3OLW PDBsum:3OLX PDBsum:3OLY PDBsum:3OO0 PDBsum:3OO1
PDBsum:3RVJ PDBsum:3RVK PDBsum:3RVL PDBsum:3RVM PDBsum:3RVN
PDBsum:3RVO PDBsum:3RVP PDBsum:3RVQ PDBsum:3RVR PDBsum:3RVS
PDBsum:5CHY PDBsum:6CHY ProteinModelPortal:P0AE67 SMR:P0AE67
DIP:DIP-48237N IntAct:P0AE67 SWISS-2DPAGE:P0AE67 PRIDE:P0AE67
EnsemblBacteria:EBESCT00000000750 EnsemblBacteria:EBESCT00000017790
GeneID:12930559 GeneID:946393 KEGG:ecj:Y75_p1858 KEGG:eco:b1882
PATRIC:32119091 EchoBASE:EB0148 EcoGene:EG10150 KO:K03413
OMA:FGFVISD ProtClustDB:PRK10610 BioCyc:EcoCyc:CHEY-MONOMER
BioCyc:ECOL316407:JW1871-MONOMER EvolutionaryTrace:P0AE67
Genevestigator:P0AE67 Uniprot:P0AE67
Length = 129
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 33/129 (25%), Positives = 59/129 (45%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+ D + L VDD R+++ LLK + V + G AL L Q
Sbjct: 1 MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL-----------QAG 49
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+I+D+ MP M G +LL+ I+ ++ +PV+++++E I + GA + +K
Sbjct: 50 GYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVK 109
Query: 123 PVQLADVNK 131
P A + +
Sbjct: 110 PFTAATLEE 118
>UNIPROTKB|Q9A5I5 [details] [associations]
symbol:pleD "Response regulator PleD" species:190650
"Caulobacter crescentus CB15" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0005525
GO:GO:0005737 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0007049 SUPFAM:SSF55073 UniPathway:UPA00599 GO:GO:0052621
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG3706 EMBL:AE005673
GenomeReviews:AE005673_GR KO:K02488 EMBL:L42554 PIR:E87554
RefSeq:NP_421265.1 ProteinModelPortal:Q9A5I5 SMR:Q9A5I5
DIP:DIP-29503N IntAct:Q9A5I5 GeneID:943650 KEGG:ccr:CC_2462
PATRIC:21301956 HOGENOM:HOG000167204 OMA:LAICERN
ProtClustDB:PRK09581 Uniprot:Q9A5I5
Length = 454
Score = 125 (49.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/115 (31%), Positives = 59/115 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + +L+E L Y+V+ G AL + D ++I+ D
Sbjct: 5 ILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTAL---AMAARDLP--------DIILLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPV 124
MPGM G+ + RK+K+ + + IPVV++++ + RI LE GA +F KP+
Sbjct: 54 VMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQG-LESGASDFLTKPI 107
>UNIPROTKB|P14376 [details] [associations]
symbol:rcsC "RcsC sensory histidine kinase" species:83333
"Escherichia coli K-12" [GO:0018106 "peptidyl-histidine
phosphorylation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0023014 "signal transduction by phosphorylation"
evidence=IEA;IDA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046777
"protein autophosphorylation" evidence=IMP] [GO:0044010
"single-species biofilm formation" evidence=IMP] [GO:0071470
"cellular response to osmotic stress" evidence=IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA;RCA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA;IDA] [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA;IDA] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 InterPro:IPR019017 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 Pfam:PF09456 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50112 PROSITE:PS51426 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0006355 GO:GO:0035556 EMBL:U00096
EMBL:AP009048 GenomeReviews:U00096_GR GO:GO:0046777 GO:GO:0005622
GO:GO:0071470 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
BRENDA:2.7.13.3 GO:GO:0018106 GO:GO:0044010 EMBL:M28242 EMBL:L11272
PIR:H64991 RefSeq:NP_416722.2 PDB:2AYX PDB:2AYY PDB:2AYZ
PDBsum:2AYX PDBsum:2AYY PDBsum:2AYZ ProteinModelPortal:P14376
SMR:P14376 DIP:DIP-10647N IntAct:P14376 MINT:MINT-1267658
PRIDE:P14376 EnsemblBacteria:EBESCT00000001645
EnsemblBacteria:EBESCT00000017555 GeneID:948993 KEGG:eco:b2218
PATRIC:32119795 EchoBASE:EB0815 EcoGene:EG10822
HOGENOM:HOG000122300 KO:K07677 OMA:HPINRSL ProtClustDB:PRK10841
BioCyc:EcoCyc:RCSC-MONOMER BioCyc:ECOL316407:JW5917-MONOMER
BioCyc:ECOL316407:JW5920-MONOMER EvolutionaryTrace:P14376
Genevestigator:P14376 Uniprot:P14376
Length = 949
Score = 126 (49.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/129 (28%), Positives = 68/129 (52%)
Query: 4 VTDSQ-FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
V+D+ +L VDD I+R+L+ L + YQ + G ++ L +L+++
Sbjct: 819 VSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDG---VDALNVLSKNH------- 868
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
++++++D MP M GY L ++I++ +PV+ +++ + RCLE G + K
Sbjct: 869 -IDIVLSDVNMPNMDGYRLTQRIRQLGLT--LPVIGVTANALAEEKQRCLESGMDSCLSK 925
Query: 123 PVQLADVNK 131
PV L DV K
Sbjct: 926 PVTL-DVIK 933
>UNIPROTKB|Q74DM7 [details] [associations]
symbol:cheY34H-1 "Response receiver CheY associated with
MCPs of class 34H" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P08402
RefSeq:NP_952342.1 ProteinModelPortal:Q74DM7 GeneID:2688101
KEGG:gsu:GSU1289 PATRIC:22025351 OMA:FDVTEAC ProtClustDB:CLSK828284
BioCyc:GSUL243231:GH27-1257-MONOMER Uniprot:Q74DM7
Length = 121
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ VDDS R+++ LK + Y V G AL L +V+++ITD
Sbjct: 5 IMTVDDSASVRQMVSFTLKQNGYDVVEAVDGKDALAKLA-----------GTRVDMVITD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP + G L++ ++ + + + P+V++++E+ SR GA + +KP
Sbjct: 54 LNMPNLDGIGLIKGVRANPTYRFTPIVMLTTESQESRKQEGKAAGATGWIVKP 106
>TIGR_CMR|GSU_1289 [details] [associations]
symbol:GSU_1289 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
HSSP:P08402 RefSeq:NP_952342.1 ProteinModelPortal:Q74DM7
GeneID:2688101 KEGG:gsu:GSU1289 PATRIC:22025351 OMA:FDVTEAC
ProtClustDB:CLSK828284 BioCyc:GSUL243231:GH27-1257-MONOMER
Uniprot:Q74DM7
Length = 121
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ VDDS R+++ LK + Y V G AL L +V+++ITD
Sbjct: 5 IMTVDDSASVRQMVSFTLKQNGYDVVEAVDGKDALAKLA-----------GTRVDMVITD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP + G L++ ++ + + + P+V++++E+ SR GA + +KP
Sbjct: 54 LNMPNLDGIGLIKGVRANPTYRFTPIVMLTTESQESRKQEGKAAGATGWIVKP 106
>UNIPROTKB|Q746Z1 [details] [associations]
symbol:GSU3376 "Response receiver-modulated diguanylate
cyclase" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0006355
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:NP_954416.1 HSSP:P06143
ProteinModelPortal:Q746Z1 GeneID:2686891 KEGG:gsu:GSU3376
PATRIC:22029607 HOGENOM:HOG000167205 OMA:LTHLHNR
ProtClustDB:CLSK829255 BioCyc:GSUL243231:GH27-3335-MONOMER
Uniprot:Q746Z1
Length = 308
Score = 123 (48.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 38/132 (28%), Positives = 72/132 (54%)
Query: 12 LAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDY 71
L +DDS + R+ I R LK + T +++ + F LLN +V+L++ D
Sbjct: 6 LVIDDSEVLREEIVRTLKEARLFETYLEARDGLEGFKTLLNN---------KVDLVLCDL 56
Query: 72 CMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPVQLAD-V 129
MP M G+ L + L+D+P+++++S E+ ++I R LE+GA ++ KP + V
Sbjct: 57 EMPRMDGFRFLSMTRSRGELQDLPIILLTSREDRDTKI-RGLEQGASDYVTKPFDSGELV 115
Query: 130 NKLKPHL-MKGI 140
+++ + +KG+
Sbjct: 116 ARVRVQMKVKGL 127
>TIGR_CMR|GSU_3376 [details] [associations]
symbol:GSU_3376 "GGDEF/response regulator receiver domain
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 Pfam:PF00990 GO:GO:0006355
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
SUPFAM:SSF55073 GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160
SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:NP_954416.1 HSSP:P06143
ProteinModelPortal:Q746Z1 GeneID:2686891 KEGG:gsu:GSU3376
PATRIC:22029607 HOGENOM:HOG000167205 OMA:LTHLHNR
ProtClustDB:CLSK829255 BioCyc:GSUL243231:GH27-3335-MONOMER
Uniprot:Q746Z1
Length = 308
Score = 123 (48.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 38/132 (28%), Positives = 72/132 (54%)
Query: 12 LAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDY 71
L +DDS + R+ I R LK + T +++ + F LLN +V+L++ D
Sbjct: 6 LVIDDSEVLREEIVRTLKEARLFETYLEARDGLEGFKTLLNN---------KVDLVLCDL 56
Query: 72 CMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPVQLAD-V 129
MP M G+ L + L+D+P+++++S E+ ++I R LE+GA ++ KP + V
Sbjct: 57 EMPRMDGFRFLSMTRSRGELQDLPIILLTSREDRDTKI-RGLEQGASDYVTKPFDSGELV 115
Query: 130 NKLKPHL-MKGI 140
+++ + +KG+
Sbjct: 116 ARVRVQMKVKGL 127
>TIGR_CMR|BA_1660 [details] [associations]
symbol:BA_1660 "chemotaxis response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006935 "chemotaxis" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
OMA:PFQAPKV RefSeq:NP_844107.1 RefSeq:YP_018295.1
RefSeq:YP_027808.1 HSSP:Q56312 ProteinModelPortal:Q81SI8 SMR:Q81SI8
DNASU:1083740 EnsemblBacteria:EBBACT00000009828
EnsemblBacteria:EBBACT00000015597 EnsemblBacteria:EBBACT00000020958
GeneID:1083740 GeneID:2817294 GeneID:2851539 KEGG:ban:BA_1660
KEGG:bar:GBAA_1660 KEGG:bat:BAS1541 ProtClustDB:CLSK916318
BioCyc:BANT260799:GJAJ-1613-MONOMER
BioCyc:BANT261594:GJ7F-1681-MONOMER Uniprot:Q81SI8
Length = 122
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD++ R +I+ LLK++S + + +E + E +Q +++ D
Sbjct: 5 ILVVDDAMFMRTMIKNLLKSNS-EFEVIGEAENGVEAIQKYKE--------LQPDIVTLD 55
Query: 71 YCMPGMTGYDLLRKI-KESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
MP M G + L++I K AS K VVI S+ + ++ GA++F +KP Q AD
Sbjct: 56 ITMPEMDGLEALKEIIKIDASAK---VVICSAMGQQGMVLDAIKGGAKDFIVKPFQ-AD 110
>TAIR|locus:2155954 [details] [associations]
symbol:APRR4 "pseudo-response regulator 4" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0035556 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AB016872 IPI:IPI00535768 RefSeq:NP_199735.1
UniGene:At.55447 ProteinModelPortal:Q9FJ16 SMR:Q9FJ16
EnsemblPlants:AT5G49240.1 GeneID:834984 KEGG:ath:AT5G49240
GeneFarm:4344 TAIR:At5g49240 eggNOG:NOG265546 HOGENOM:HOG000029456
InParanoid:Q9FJ16 KO:K14491 OMA:SEIGSEM PhylomeDB:Q9FJ16
ProtClustDB:CLSN2916474 Genevestigator:Q9FJ16 GermOnline:AT5G49240
Uniprot:Q9FJ16
Length = 292
Score = 122 (48.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL D+ ++ER L+ YQVT + NKA+ L N + + +IQVN
Sbjct: 44 VLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLR--NHRNRFDLAMIQVN----- 96
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
G D+ R + E S D+P++I+S ++ + + + GA ++ +KP++ D+
Sbjct: 97 ----NAEG-DIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLR 151
Query: 131 KLKPHLMK 138
+ HL+K
Sbjct: 152 IVFKHLVK 159
>TIGR_CMR|CPS_1474 [details] [associations]
symbol:CPS_1474 "chemotaxis protein CheV" species:167879
"Colwellia psychrerythraea 34H" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341 eggNOG:COG0835
HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181 PIRSF:PIRSF002867
RefSeq:YP_268216.1 ProteinModelPortal:Q485P9 STRING:Q485P9
GeneID:3523307 KEGG:cps:CPS_1474 PATRIC:21466155 OMA:AWEELSR
BioCyc:CPSY167879:GI48-1555-MONOMER Uniprot:Q485P9
Length = 309
Score = 122 (48.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
V+ DDS + R + R L+ + +G ALE L L E N +V L+I+D
Sbjct: 181 VMIADDSTVARNQVRRALEPLGINMVLAKNGRDALEQL-LAIEATCENCITEKVALMISD 239
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE--GAEEFFLK--PVQL 126
MP M GY L ++K + + +P+++ +S + N + E GAE+F K P +L
Sbjct: 240 IEMPEMDGYTLTAEVKGNDRMSKMPIILHTS--LSGVFNNAMVEKVGAEDFIPKFHPDEL 297
Query: 127 ADVNK 131
A K
Sbjct: 298 ATAVK 302
>UNIPROTKB|Q74AX6 [details] [associations]
symbol:cheY40H-1 "Response receiver CheY associated with
MCPs of class 40H" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P06143
RefSeq:NP_953272.2 ProteinModelPortal:Q74AX6 GeneID:2685646
KEGG:gsu:GSU2223 PATRIC:22027301 OMA:GANEYLV ProtClustDB:CLSK828765
BioCyc:GSUL243231:GH27-2170-MONOMER Uniprot:Q74AX6
Length = 121
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/123 (27%), Positives = 62/123 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKT-SSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L +DS R ++ +++ ++V SG +AL LL + +++LIIT
Sbjct: 4 ILIAEDSATMRSMLVATIQSLDGFEVVEASSGFEALR---LLPRE--------RLDLIIT 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP + G +L+ ++ S + + IP+ I+S+E + L GA E+ +KP A +
Sbjct: 53 DINMPDINGLELVSFVRTSDNYRHIPLFIISTEGSERDREKGLSLGANEYLVKPFDPARL 112
Query: 130 NKL 132
L
Sbjct: 113 QDL 115
>TIGR_CMR|GSU_0403 [details] [associations]
symbol:GSU_0403 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P06143
RefSeq:NP_951462.1 ProteinModelPortal:Q74G46 GeneID:2685717
KEGG:gsu:GSU0403 PATRIC:22023550 OMA:MEGKSID ProtClustDB:CLSK827806
BioCyc:GSUL243231:GH27-435-MONOMER Uniprot:Q74G46
Length = 120
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 32/122 (26%), Positives = 59/122 (48%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+VL VDDS RK+I R L+ + V + +E L +L+ V+LI++
Sbjct: 3 NVLIVDDSSTMRKIISRSLRQAGLPVDEIFEAGDGIEGLNVLSGKS--------VDLILS 54
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP M G + +++ + A+ P+V++++E + + GA + KP +
Sbjct: 55 DINMPNMDGLEFIKQAR--ANGHKAPIVMITTEGGEDILKEAISSGASDSIKKPFTPDQL 112
Query: 130 NK 131
N+
Sbjct: 113 NE 114
>TIGR_CMR|GSU_2223 [details] [associations]
symbol:GSU_2223 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
HSSP:P06143 RefSeq:NP_953272.2 ProteinModelPortal:Q74AX6
GeneID:2685646 KEGG:gsu:GSU2223 PATRIC:22027301 OMA:GANEYLV
ProtClustDB:CLSK828765 BioCyc:GSUL243231:GH27-2170-MONOMER
Uniprot:Q74AX6
Length = 121
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/123 (27%), Positives = 62/123 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKT-SSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L +DS R ++ +++ ++V SG +AL LL + +++LIIT
Sbjct: 4 ILIAEDSATMRSMLVATIQSLDGFEVVEASSGFEALR---LLPRE--------RLDLIIT 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP + G +L+ ++ S + + IP+ I+S+E + L GA E+ +KP A +
Sbjct: 53 DINMPDINGLELVSFVRTSDNYRHIPLFIISTEGSERDREKGLSLGANEYLVKPFDPARL 112
Query: 130 NKL 132
L
Sbjct: 113 QDL 115
>UNIPROTKB|Q0PBM1 [details] [associations]
symbol:cheV "Chemotaxis protein" species:192222
"Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001789
InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584 PROSITE:PS50110
PROSITE:PS50851 SMART:SM00260 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0016740 GO:GO:0005622 GO:GO:0006935
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341
EMBL:AL111168 GenomeReviews:AL111168_GR PIR:C81447
RefSeq:YP_002343726.1 ProteinModelPortal:Q0PBM1 IntAct:Q0PBM1
MINT:MINT-6484008 DNASU:904609 GeneID:904609 KEGG:cje:Cj0285c
PATRIC:20057489 HOGENOM:HOG000255027 KO:K03415 OMA:AKWIGIV
ProtClustDB:CLSK872487 BioCyc:CJEJ192222:GJTS-264-MONOMER
InterPro:IPR024181 PIRSF:PIRSF002867 Uniprot:Q0PBM1
Length = 318
Score = 122 (48.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 12 LAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ--VNLIIT 69
L +DDS+ RK ++ +++ +QV G +E + L E Q + + + +I++
Sbjct: 185 LILDDSMTARKRVKEMMQQMGFQVVEAKDG---VEGINKLEELSQIYGESLNDTLKIIVS 241
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE-GAEEFFLK 122
D MP M G+ +IKE KDIP+V SS + + ++E G E + +K
Sbjct: 242 DVEMPQMDGFHFAARIKEDPRFKDIPIVFNSSLSNEFMNEKGVQEAGGEGYLVK 295
>TIGR_CMR|CJE_0333 [details] [associations]
symbol:CJE_0333 "chemotaxis protein CheV" species:195099
"Campylobacter jejuni RM1221" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0016740 GO:GO:0005622
GO:GO:0006935 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341 eggNOG:COG0835
PIR:C81447 HOGENOM:HOG000255027 KO:K03415 OMA:AKWIGIV
ProtClustDB:CLSK872487 InterPro:IPR024181 PIRSF:PIRSF002867
RefSeq:YP_178353.1 ProteinModelPortal:Q5HWI2 STRING:Q5HWI2
GeneID:3231095 KEGG:cjr:CJE0333 PATRIC:20042368
BioCyc:CJEJ195099:GJC0-338-MONOMER Uniprot:Q5HWI2
Length = 318
Score = 122 (48.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 12 LAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ--VNLIIT 69
L +DDS+ RK ++ +++ +QV G +E + L E Q + + + +I++
Sbjct: 185 LILDDSMTARKRVKEMMQQMGFQVVEAKDG---VEGINKLEELSQIYGESLNDTLKIIVS 241
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE-GAEEFFLK 122
D MP M G+ +IKE KDIP+V SS + + ++E G E + +K
Sbjct: 242 DVEMPQMDGFHFAARIKEDPRFKDIPIVFNSSLSNEFMNEKGVQEAGGEGYLVK 295
>DICTYBASE|DDB_G0282927 [details] [associations]
symbol:dhkL "histidine kinase L" species:44689
"Dictyostelium discoideum" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113
SMART:SM00091 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 InterPro:IPR001610 dictyBase:DDB_G0282927
GO:GO:0005525 GO:GO:0005524 GenomeReviews:CM000153_GR GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0003924 GO:GO:0006184
GO:GO:0005622 EMBL:AAFI02000049 GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
EMBL:AF362373 EMBL:AF258796 RefSeq:XP_639305.1
ProteinModelPortal:Q54RP6 EnsemblProtists:DDB0191389 GeneID:8623876
KEGG:ddi:DDB_G0282927 OMA:FIERNDT Uniprot:Q54RP6
Length = 1709
Score = 126 (49.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 34/125 (27%), Positives = 65/125 (52%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD+ I+ +++ ++L+T +V +V SG AL + + D + I D
Sbjct: 1571 VLVVDDNHINIQILSKMLQTVGCEVDSVLSGADALAKINQSSGDSY--------DAIFLD 1622
Query: 71 YCMPGMTGYDLLRKIKESASLKDIP--VVIMSSENIPSRIN-RCLEEGAEEFFLKPVQLA 127
MP M G+ + RKI+E +P +I ++ N+ +C + G ++F KP++ A
Sbjct: 1623 IQMPDMDGFQVSRKIREREKKFSLPRVAIIATTANVFKEDQLKCFDAGMDDFISKPIKRA 1682
Query: 128 DVNKL 132
++ ++
Sbjct: 1683 EIKEI 1687
>TIGR_CMR|GSU_2212 [details] [associations]
symbol:GSU_2212 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P06143
RefSeq:NP_953261.1 ProteinModelPortal:Q74AY7 GeneID:2687085
KEGG:gsu:GSU2212 PATRIC:22027279 OMA:SSAMRRQ ProtClustDB:CLSK924580
BioCyc:GSUL243231:GH27-2150-MONOMER Uniprot:Q74AY7
Length = 128
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+DS R+LI LK ++ V++ + ++ GL ++ ++ I +LI+TD
Sbjct: 6 VLIVEDSPTMRQLIAFALKRIP-GISIVEASD-GVD--GL----KKLSAHAI--DLILTD 55
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G L+ ++ S + +P+ I+++E R L GA + KP+Q V
Sbjct: 56 INMPVMDGLKLVSLVRSDPSHRHLPIAIITTEGAAEDRERALALGANAYITKPIQAGRVL 115
Query: 131 KLKPHLMKGIS 141
+ L+ GIS
Sbjct: 116 SVARELL-GIS 125
>TIGR_CMR|SPO_1023 [details] [associations]
symbol:SPO_1023 "response regulator" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820
RefSeq:YP_166275.1 ProteinModelPortal:Q5LUN0 GeneID:3195651
KEGG:sil:SPO1023 PATRIC:23375339 OMA:AGVSRFM ProtClustDB:CLSK933415
Uniprot:Q5LUN0
Length = 126
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL ++D + I LL +QV G A++ + D L+I D
Sbjct: 5 VLLIEDEPNIAEAIRFLLSRDGWQVETHADGADAVDIITTALPD-----------LVILD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE-GAEEFFLKPVQLADV 129
+PG +G D+LR+++E A+ +D+PV+++++ SR E+ G F KP +V
Sbjct: 54 VMLPGKSGMDILRELREQAATQDLPVLMLTARG-QSRDRDMAEKAGVSRFMTKPFSNTEV 112
>TIGR_CMR|GSU_2693 [details] [associations]
symbol:GSU_2693 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820
RefSeq:NP_953738.1 ProteinModelPortal:Q749P9 GeneID:2687548
KEGG:gsu:GSU2693 PATRIC:22028241 OMA:VEMHRAR
BioCyc:GSUL243231:GH27-2669-MONOMER Uniprot:Q749P9
Length = 128
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ +VL VDD + ++ LL++ +VT+ G +A++ + +T +++
Sbjct: 3 RINVLIVDDDVNFLYVLGLLLESKDLEVTSASRGAEAVDIV------RKTT-----FDMV 51
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ-- 125
ITD+ MPGM G +L +KE D+PV++++ E I + G KPV
Sbjct: 52 ITDFSMPGMNGLELAAAVKELHP--DLPVMMVTCEVTSDLIEMATDVGICRVLDKPVNVG 109
Query: 126 --LADV 129
LAD+
Sbjct: 110 RLLADI 115
>TIGR_CMR|GSU_1129 [details] [associations]
symbol:GSU_1129 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 HSSP:P06143
RefSeq:NP_952182.1 ProteinModelPortal:Q74E35 GeneID:2687644
KEGG:gsu:GSU1129 PATRIC:22025020 OMA:YEFANII ProtClustDB:CLSK828199
BioCyc:GSUL243231:GH27-1139-MONOMER Uniprot:Q74E35
Length = 453
Score = 122 (48.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 30/119 (25%), Positives = 64/119 (53%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L +DD R+ + LLK + + V + +G++A + L D +++ITD
Sbjct: 7 ILLIDDEETGREALTLLLKAAGHAVKSAGAGSEAFQ---TLTRDT--------FDIVITD 55
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
+P +G D+L+K+KE A L ++ ++I + + + + ++EGA ++ KP+ ++
Sbjct: 56 LFLPDASGIDILKKVKEDAPLTEV-ILITGHASAETAV-KAMKEGAFDYITKPLNFDEL 112
>UNIPROTKB|Q3ADA5 [details] [associations]
symbol:cheY2 "Chemotaxis protein CheY" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_359879.1
ProteinModelPortal:Q3ADA5 STRING:Q3ADA5 GeneID:3726250
KEGG:chy:CHY_1032 PATRIC:21275199 OMA:AGANFYL
BioCyc:CHYD246194:GJCN-1031-MONOMER Uniprot:Q3ADA5
Length = 118
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 34/114 (29%), Positives = 59/114 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS R+ + + + S++V +G +ALE +LN + +L+ D
Sbjct: 3 VLIVDDSFTVRQYFKEIFQGFSWEVEEAVNGLEALE--KVLNGE---------FDLMTVD 51
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MP M GY + K++E +PV+++S+E+ + L+ GA + +KPV
Sbjct: 52 VNMPKMDGYTFVYKVREMGV--SLPVILISTESKEHDKLKGLQAGATLYLVKPV 103
>UNIPROTKB|Q45976 [details] [associations]
symbol:divK "Cell division response regulator DivK"
species:155892 "Caulobacter vibrioides" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0051301 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:U13765 PIR:S58671 HSSP:Q9A5I4
ProteinModelPortal:Q45976 SMR:Q45976 DIP:DIP-46001N IntAct:Q45976
Uniprot:Q45976
Length = 125
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 31/116 (26%), Positives = 56/116 (48%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+D+ ++ KL LL+ Y+ G L L + E++ +LI+ D
Sbjct: 5 VLIVEDNELNMKLFHDLLEAQGYETLQTREG---LSALSIARENKP--------DLILMD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
+P ++G ++ + +KE L IPVV +++ + R E G E + KP+ +
Sbjct: 54 IQLPEISGLEVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGGCEAYISKPISV 109
>UNIPROTKB|Q48P87 [details] [associations]
symbol:pilG "Type IV pilus response regulator PilG"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0009297 "pilus assembly" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0784 HOGENOM:HOG000034820 GO:GO:0009297
RefSeq:YP_272782.1 ProteinModelPortal:Q48P87 STRING:Q48P87
GeneID:3558225 KEGG:psp:PSPPH_0479 PATRIC:19969990 KO:K02657
OMA:CDILMPR ProtClustDB:CLSK821914 Uniprot:Q48P87
Length = 136
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 38/134 (28%), Positives = 63/134 (47%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQV-TAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
S V+ +DDS R+ E LLK + +V TA+D G AL + D
Sbjct: 6 SALKVMVIDDSKTIRRTAETLLKNAGCEVITAID-GFDALAKIA----DNHPR------- 53
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSEN--IPSRINRCLEEGAEEFFLKP 123
+I D MP + GY IK + + K PV+++SS++ R + G+++F KP
Sbjct: 54 IIFVDIMMPRLDGYQTCALIKNNRAFKSTPVIMLSSKDGLFDKAKGRIV--GSDQFLTKP 111
Query: 124 VQLADV-NKLKPHL 136
++ + +K H+
Sbjct: 112 FSKEELLSAIKAHV 125
>UNIPROTKB|Q9KS62 [details] [associations]
symbol:VC_1398 "Chemotaxis protein CheY" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413
OMA:AGANFYL HSSP:P06143 PIR:F82205 RefSeq:NP_231041.1
ProteinModelPortal:Q9KS62 DNASU:2614030 GeneID:2614030
KEGG:vch:VC1398 PATRIC:20081860 ProtClustDB:CLSK794124
Uniprot:Q9KS62
Length = 124
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
V+ VDD+ R + LL+ + +G +ALE + + V+L + D
Sbjct: 5 VMVVDDASTVRMYHKALLEEIGIFILEASNGVEALE-----------RALEMPVDLFLVD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ L+R+I+ L IP V++S+E+ S + + GA + +KPV ++
Sbjct: 54 INMPKMDGFTLVREIRCRPELAGIPTVMISTESQESDRQQGIHMGANLYMVKPVNPEELQ 113
Query: 131 KLKPHLMKGI 140
+ ++ G+
Sbjct: 114 QTVTLMLGGL 123
>TIGR_CMR|CHY_1032 [details] [associations]
symbol:CHY_1032 "chemotaxis protein CheY" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0006935 "chemotaxis" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0005622
GO:GO:0006935 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_359879.1
ProteinModelPortal:Q3ADA5 STRING:Q3ADA5 GeneID:3726250
KEGG:chy:CHY_1032 PATRIC:21275199 OMA:AGANFYL
BioCyc:CHYD246194:GJCN-1031-MONOMER Uniprot:Q3ADA5
Length = 118
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 34/114 (29%), Positives = 59/114 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS R+ + + + S++V +G +ALE +LN + +L+ D
Sbjct: 3 VLIVDDSFTVRQYFKEIFQGFSWEVEEAVNGLEALE--KVLNGE---------FDLMTVD 51
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MP M GY + K++E +PV+++S+E+ + L+ GA + +KPV
Sbjct: 52 VNMPKMDGYTFVYKVREMGV--SLPVILISTESKEHDKLKGLQAGATLYLVKPV 103
>TIGR_CMR|VC_1398 [details] [associations]
symbol:VC_1398 "chemotaxis protein CheY" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413 OMA:AGANFYL
HSSP:P06143 PIR:F82205 RefSeq:NP_231041.1 ProteinModelPortal:Q9KS62
DNASU:2614030 GeneID:2614030 KEGG:vch:VC1398 PATRIC:20081860
ProtClustDB:CLSK794124 Uniprot:Q9KS62
Length = 124
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
V+ VDD+ R + LL+ + +G +ALE + + V+L + D
Sbjct: 5 VMVVDDASTVRMYHKALLEEIGIFILEASNGVEALE-----------RALEMPVDLFLVD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ L+R+I+ L IP V++S+E+ S + + GA + +KPV ++
Sbjct: 54 INMPKMDGFTLVREIRCRPELAGIPTVMISTESQESDRQQGIHMGANLYMVKPVNPEELQ 113
Query: 131 KLKPHLMKGI 140
+ ++ G+
Sbjct: 114 QTVTLMLGGL 123
>UNIPROTKB|O25153 [details] [associations]
symbol:C694_01990 "Histidine kinase CheA" species:85962
"Helicobacter pylori 26695" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 InterPro:IPR002545
InterPro:IPR003594 InterPro:IPR004105 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF01584
Pfam:PF01627 Pfam:PF02518 Pfam:PF02895 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50851 PROSITE:PS50894 SMART:SM00073
SMART:SM00260 SMART:SM00387 SMART:SM00448 InterPro:IPR005467
GO:GO:0005524 GO:GO:0005737 GO:GO:0006355 GO:GO:0035556
GO:GO:0006935 GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160 SUPFAM:SSF47226
EMBL:AE000511 GenomeReviews:AE000511_GR KO:K03407
Gene3D:1.10.287.560 SUPFAM:SSF50341 EMBL:CP003904 PIR:H64568
RefSeq:NP_207190.1 RefSeq:YP_006934316.1 HSSP:Q56310 DIP:DIP-3162N
MINT:MINT-160605 GeneID:13869578 GeneID:898900 KEGG:heo:C694_01990
KEGG:hpy:HP0392 PATRIC:20592023 OMA:CDHGIED ProtClustDB:CLSK872488
Uniprot:O25153
Length = 803
Score = 123 (48.4 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 36/117 (30%), Positives = 60/117 (51%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S + VLA+DDS DR +I + LK +T +++ N LE L +L N I +
Sbjct: 675 SDYIVLAIDDSSTDRAIIRKCLKPLG--ITLLEATN-GLEGLEMLK-----NGDKIP-DA 725
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
I+ D MP M GY ++++ K++P++ ++S + R +E G E+ KP
Sbjct: 726 ILVDIEMPKMDGYTFASEVRKYNKFKNLPLIAVTSRVTKTDRMRGVESGMTEYITKP 782
>TIGR_CMR|GSU_1495 [details] [associations]
symbol:GSU_1495 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 HSSP:P06143
RefSeq:NP_952546.1 ProteinModelPortal:Q74D24 GeneID:2686126
KEGG:gsu:GSU1495 PATRIC:22025837 KO:K02667 OMA:IHARAGH
ProtClustDB:CLSK828394 BioCyc:GSUL243231:GH27-1478-MONOMER
Uniprot:Q74D24
Length = 458
Score = 121 (47.7 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVL VDD + R+ + LL Y V S +AL L + +T +L+
Sbjct: 2 EIHVLVVDDELSMREFLAILLDREGYTVDQAASAEEALACL-----ERKT------YDLV 50
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
I+D MPG+ G LL +IKE D V++M++ + + ++ GA ++ KP ++
Sbjct: 51 ISDVKMPGLDGITLLGRIKEMTP--DTAVLLMTAFSTAEQAVEAMKLGAYDYIAKPFKVE 108
Query: 128 DVNKL 132
+V L
Sbjct: 109 EVKIL 113
>TIGR_CMR|BA_3067 [details] [associations]
symbol:BA_3067 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P06628
RefSeq:NP_845397.1 RefSeq:YP_019708.1 RefSeq:YP_029111.1
ProteinModelPortal:Q81NV5 DNASU:1088217
EnsemblBacteria:EBBACT00000009080 EnsemblBacteria:EBBACT00000017281
EnsemblBacteria:EBBACT00000021032 GeneID:1088217 GeneID:2817324
GeneID:2850761 KEGG:ban:BA_3067 KEGG:bar:GBAA_3067 KEGG:bat:BAS2853
OMA:LTKEHFF ProtClustDB:CLSK886597
BioCyc:BANT260799:GJAJ-2916-MONOMER
BioCyc:BANT261594:GJ7F-3019-MONOMER Uniprot:Q81NV5
Length = 223
Score = 117 (46.2 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 33/116 (28%), Positives = 66/116 (56%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+++L V+D +I L++++L+ Y V G K L+ +++E ++L++
Sbjct: 4 YNILIVEDDLIIGDLLQKILQREKYNVYWEKEGRKVLD---IIHE----------IDLVV 50
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSEN-IPSRINRCLEEGAEEFFLKP 123
D +PG GY + +KIK + L +IP++ +S+ N + S++ + L G EE+ +KP
Sbjct: 51 MDVMLPGEDGYQITKKIK-NLGL-NIPIIFLSARNDMDSKL-KGLTIG-EEYMIKP 102
>TIGR_CMR|BA_4920 [details] [associations]
symbol:BA_4920 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819
SUPFAM:SSF46894 HSSP:P08402 RefSeq:NP_847118.1 RefSeq:YP_021563.2
ProteinModelPortal:Q81KS0 DNASU:1084104
EnsemblBacteria:EBBACT00000011298 EnsemblBacteria:EBBACT00000014550
GeneID:1084104 GeneID:2819868 KEGG:ban:BA_4920 KEGG:bar:GBAA_4920
PATRIC:18787418 OMA:FFVTHPN ProtClustDB:CLSK882384
BioCyc:BANT261594:GJ7F-4779-MONOMER Uniprot:Q81KS0
Length = 229
Score = 117 (46.2 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 34/129 (26%), Positives = 68/129 (52%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L ++D + +L L+ + +QV SG L+ L ED +LII D
Sbjct: 4 ILLIEDEVSIAELQRDYLEINDFQVDVEHSGETGLQMA--LQED---------YDLIILD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD-V 129
+P M G+++ ++I+ ++KDIP++++S++ R L GA+++ KP ++ V
Sbjct: 53 IMLPKMNGFEICKQIR---AIKDIPILLVSAKKEDIDKIRGLGLGADDYITKPFSPSELV 109
Query: 130 NKLKPHLMK 138
++K H+ +
Sbjct: 110 ARVKAHISR 118
>TIGR_CMR|GSU_1220 [details] [associations]
symbol:GSU_1220 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR007831 Pfam:PF00072 Pfam:PF05157 PROSITE:PS50110
SMART:SM00448 GO:GO:0005524 GO:GO:0006355 GO:GO:0035556
GO:GO:0006810 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:NP_952273.1
ProteinModelPortal:Q74DU5 DNASU:2688249 GeneID:2688249
KEGG:gsu:GSU1220 PATRIC:22025211 HOGENOM:HOG000134726 OMA:PIRIVTR
ProtClustDB:CLSK828245 BioCyc:GSUL243231:GH27-1212-MONOMER
Uniprot:Q74DU5
Length = 277
Score = 118 (46.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/125 (28%), Positives = 60/125 (48%)
Query: 2 GMVTDSQFH-VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
G DSQ +L V+D+ +I+ L + V G + L+ +
Sbjct: 145 GKAKDSQRQKILVVEDTPPVATIIQVALHKEGFDVLLAGDGVEGLK-----------TAV 193
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
V + +LII D MP M G+ L+R ++ + ++ D P+++++S+ R LE G +F
Sbjct: 194 VEKPDLIICDSVMPRMDGFSLMRAVRSNPTIADTPMILLTSKATGEDEQRALEAGFIDFI 253
Query: 121 LKPVQ 125
KPVQ
Sbjct: 254 AKPVQ 258
>TIGR_CMR|CPS_0081 [details] [associations]
symbol:CPS_0081 "response regulator/GGDEF domain protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG3706 RefSeq:YP_266849.1
ProteinModelPortal:Q48AR4 STRING:Q48AR4 DNASU:3523347
GeneID:3523347 KEGG:cps:CPS_0081 PATRIC:21463585
HOGENOM:HOG000276492 OMA:CPEEFYC ProtClustDB:CLSK2309571
BioCyc:CPSY167879:GI48-184-MONOMER Uniprot:Q48AR4
Length = 419
Score = 120 (47.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/119 (29%), Positives = 61/119 (51%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
T+++ +L VDDS R I LLK ++ V ++G +ALE L + N +
Sbjct: 120 TNNKNTILVVDDSSSARNHIVELLKRRNFNVITANNGVQALEKLA-----QHKN-----I 169
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
++ITD MP M G +L +I+ + + + V+ +S + R ++ GA++F KP
Sbjct: 170 KMVITDLEMPAMDGIELTNEIRRVYTREQLAVIGISGASNGIHSARFIKNGADDFLRKP 228
>UNIPROTKB|P14375 [details] [associations]
symbol:zraR species:83333 "Escherichia coli K-12"
[GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA;IGI;IEP;ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IDA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA;IDA] InterPro:IPR001789
InterPro:IPR002078 InterPro:IPR002197 InterPro:IPR003593
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158 Pfam:PF02954
PRINTS:PR01590 PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382
SMART:SM00448 GO:GO:0005524 GO:GO:0005737 GO:GO:0035556 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:U00006 GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2204
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688
HOGENOM:HOG000058487 EMBL:M28369 PIR:G65207 RefSeq:NP_418432.1
RefSeq:YP_491456.1 ProteinModelPortal:P14375 SMR:P14375
DIP:DIP-9980N PRIDE:P14375 EnsemblBacteria:EBESCT00000003356
EnsemblBacteria:EBESCT00000015912 GeneID:12933469 GeneID:948505
KEGG:ecj:Y75_p3192 KEGG:eco:b4004 PATRIC:32123533 EchoBASE:EB0477
EcoGene:EG10482 KO:K07713 OMA:AEVNAGH ProtClustDB:PRK10365
BioCyc:EcoCyc:HYDG-MONOMER BioCyc:ECOL316407:JW3968-MONOMER
Genevestigator:P14375 Uniprot:P14375
Length = 441
Score = 120 (47.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 41/138 (29%), Positives = 67/138 (48%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T +L VDD I +++ LL+ Y V +SG +ALE Q QV
Sbjct: 1 MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALE---------QVREQVF- 50
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+L++ D M M G L++IK A IPV+IM++ + L+ GA ++ +KP
Sbjct: 51 -DLVLCDVRMAEMDGIATLKEIK--ALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKP 107
Query: 124 VQLADVNKLKPHLMKGIS 141
+ D + L+ L K ++
Sbjct: 108 L---DFDNLQATLEKALA 122
>UNIPROTKB|Q9KUA1 [details] [associations]
symbol:VC_0622 "Sensory box sensor histidine
kinase/response regulator" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=ISS] [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0023014 "signal transduction
by phosphorylation" evidence=ISS] [GO:0035556 "intracellular signal
transduction" evidence=ISS] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF02518 Pfam:PF13188 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 SMART:SM00091 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005524 GO:GO:0006355 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 HSSP:P08402 PIR:A82300
RefSeq:NP_230271.1 ProteinModelPortal:Q9KUA1 DNASU:2615410
GeneID:2615410 KEGG:vch:VC0622 PATRIC:20080353 OMA:SLYVSSQ
ProtClustDB:CLSK874044 Uniprot:Q9KUA1
Length = 1177
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 29/127 (22%), Positives = 64/127 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD ++ ++++ L+ Y+V G++ LE + E + L++ D
Sbjct: 772 LLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLE--AIKREKPE---------LVLLD 820
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPGM+GY + K++++ ++P++++++ N R E GA ++ KP ++
Sbjct: 821 IMMPGMSGYQVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELA 880
Query: 131 -KLKPHL 136
++ HL
Sbjct: 881 ARIVAHL 887
>TIGR_CMR|VC_0622 [details] [associations]
symbol:VC_0622 "sensory box sensor histidine
kinase/response regulator" species:686 "Vibrio cholerae O1 biovar
El Tor" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF00672 Pfam:PF02518 Pfam:PF13188
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50885 SMART:SM00091
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 HSSP:P08402 PIR:A82300
RefSeq:NP_230271.1 ProteinModelPortal:Q9KUA1 DNASU:2615410
GeneID:2615410 KEGG:vch:VC0622 PATRIC:20080353 OMA:SLYVSSQ
ProtClustDB:CLSK874044 Uniprot:Q9KUA1
Length = 1177
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 29/127 (22%), Positives = 64/127 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD ++ ++++ L+ Y+V G++ LE + E + L++ D
Sbjct: 772 LLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLE--AIKREKPE---------LVLLD 820
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPGM+GY + K++++ ++P++++++ N R E GA ++ KP ++
Sbjct: 821 IMMPGMSGYQVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELA 880
Query: 131 -KLKPHL 136
++ HL
Sbjct: 881 ARIVAHL 887
>TIGR_CMR|BA_1497 [details] [associations]
symbol:BA_1497 "DNA-binding response regulator ResD"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009060 "aerobic respiration"
evidence=ISS] [GO:0009061 "anaerobic respiration" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486
PROSITE:PS50110 SMART:SM00448 SMART:SM00862 GO:GO:0006355
GO:GO:0035556 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P08402 RefSeq:NP_843949.1
RefSeq:YP_018120.1 RefSeq:YP_027655.1 ProteinModelPortal:Q81SZ6
DNASU:1087158 EnsemblBacteria:EBBACT00000009602
EnsemblBacteria:EBBACT00000013896 EnsemblBacteria:EBBACT00000020931
GeneID:1087158 GeneID:2818509 GeneID:2850870 KEGG:ban:BA_1497
KEGG:bar:GBAA_1497 KEGG:bat:BAS1386 KO:K07775 OMA:VWHYEFF
ProtClustDB:CLSK873069 BioCyc:BANT260799:GJAJ-1460-MONOMER
BioCyc:BANT261594:GJ7F-1522-MONOMER Uniprot:Q81SZ6
Length = 238
Score = 116 (45.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/126 (25%), Positives = 65/126 (51%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
+++ +L VDD R+L++ L+ Y + D+G+ ALE + L N+ +
Sbjct: 2 ENESRILIVDDEDRIRRLLKMYLEREQYTIEEADNGDTALE-MALQND----------YD 50
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRC--LEEGAEEFFLKP 123
LI+ D MPG G ++ + ++E K P+++++++ +NR E G +++ +KP
Sbjct: 51 LILLDLMMPGKDGIEVCKGVREK---KATPIIMLTAKG--EEVNRVQGFEVGTDDYIVKP 105
Query: 124 VQLADV 129
+V
Sbjct: 106 FSPREV 111
>UNIPROTKB|Q0PBM2 [details] [associations]
symbol:cheA "Chemotaxis histidine kinase" species:192222
"Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001789
InterPro:IPR002545 InterPro:IPR003594 InterPro:IPR004105
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF01584 Pfam:PF01627 Pfam:PF02518 Pfam:PF02895
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50851 PROSITE:PS50894
SMART:SM00073 SMART:SM00260 SMART:SM00387 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0005737 GO:GO:0006355
GO:GO:0035556 GO:GO:0006935 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 KO:K03407 Gene3D:1.10.287.560 SUPFAM:SSF50341
EMBL:AL111168 GenomeReviews:AL111168_GR OMA:CDHGIED
ProtClustDB:CLSK872488 PIR:B81447 RefSeq:YP_002343725.1
ProteinModelPortal:Q0PBM2 IntAct:Q0PBM2 GeneID:904608
KEGG:cje:Cj0284c PATRIC:20057487 HOGENOM:HOG000255264
BioCyc:CJEJ192222:GJTS-263-MONOMER Uniprot:Q0PBM2
Length = 769
Score = 121 (47.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 32/117 (27%), Positives = 63/117 (53%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S + VL VDDS +DR L+++ L+ V+ +++ N +E L ++ E ++
Sbjct: 645 SDYKVLIVDDSKMDRTLMQKALEPLG--VSLIEATN-GVEALNIIKSGEH------DIDA 695
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
++ D MP M GY L +I++ + +++P++ ++S + R +E G E+ KP
Sbjct: 696 MLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRGVEVGMTEYITKP 752
>UNIPROTKB|Q5HWI3 [details] [associations]
symbol:cheA "Chemotaxis protein CheA" species:195099
"Campylobacter jejuni RM1221" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
[GO:0016301 "kinase activity" evidence=ISS] InterPro:IPR001789
InterPro:IPR002545 InterPro:IPR003594 InterPro:IPR004105
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF01584 Pfam:PF01627 Pfam:PF02518 Pfam:PF02895
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50851 PROSITE:PS50894
SMART:SM00073 SMART:SM00260 SMART:SM00387 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0005737 GO:GO:0006355
GO:GO:0035556 GO:GO:0006935 GO:GO:0016301 GO:GO:0004871
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0000155
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 KO:K03407 Gene3D:1.10.287.560
SUPFAM:SSF50341 OMA:CDHGIED ProtClustDB:CLSK872488
HOGENOM:HOG000255264 RefSeq:YP_178352.1 ProteinModelPortal:Q5HWI3
STRING:Q5HWI3 GeneID:3231094 KEGG:cjr:CJE0332 PATRIC:20042366
BioCyc:CJEJ195099:GJC0-337-MONOMER Uniprot:Q5HWI3
Length = 769
Score = 121 (47.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 32/117 (27%), Positives = 63/117 (53%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S + VL VDDS +DR L+++ L+ V+ +++ N +E L ++ E ++
Sbjct: 645 SDYKVLIVDDSKMDRTLMQKALEPLG--VSLIEATN-GVEALNIIKSGEH------DIDA 695
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
++ D MP M GY L +I++ + +++P++ ++S + R +E G E+ KP
Sbjct: 696 MLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRGVEVGMTEYITKP 752
>TIGR_CMR|CJE_0332 [details] [associations]
symbol:CJE_0332 "chemotaxis protein CheA" species:195099
"Campylobacter jejuni RM1221" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
[GO:0016301 "kinase activity" evidence=ISS] InterPro:IPR001789
InterPro:IPR002545 InterPro:IPR003594 InterPro:IPR004105
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF01584 Pfam:PF01627 Pfam:PF02518 Pfam:PF02895
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50851 PROSITE:PS50894
SMART:SM00073 SMART:SM00260 SMART:SM00387 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0005737 GO:GO:0006355
GO:GO:0035556 GO:GO:0006935 GO:GO:0016301 GO:GO:0004871
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0000155
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 KO:K03407 Gene3D:1.10.287.560
SUPFAM:SSF50341 OMA:CDHGIED ProtClustDB:CLSK872488
HOGENOM:HOG000255264 RefSeq:YP_178352.1 ProteinModelPortal:Q5HWI3
STRING:Q5HWI3 GeneID:3231094 KEGG:cjr:CJE0332 PATRIC:20042366
BioCyc:CJEJ195099:GJC0-337-MONOMER Uniprot:Q5HWI3
Length = 769
Score = 121 (47.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 32/117 (27%), Positives = 63/117 (53%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S + VL VDDS +DR L+++ L+ V+ +++ N +E L ++ E ++
Sbjct: 645 SDYKVLIVDDSKMDRTLMQKALEPLG--VSLIEATN-GVEALNIIKSGEH------DIDA 695
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
++ D MP M GY L +I++ + +++P++ ++S + R +E G E+ KP
Sbjct: 696 MLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRGVEVGMTEYITKP 752
>UNIPROTKB|Q9KS16 [details] [associations]
symbol:VC_1445 "Sensor histidine kinase/response regulator"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0023014 "signal transduction by phosphorylation"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 PIR:E82198 RefSeq:NP_231088.1
ProteinModelPortal:Q9KS16 DNASU:2614077 GeneID:2614077
KEGG:vch:VC1445 PATRIC:20081952 OMA:GTAKDIS ProtClustDB:CLSK874379
Uniprot:Q9KS16
Length = 572
Score = 120 (47.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 32/127 (25%), Positives = 65/127 (51%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+V H+L V+D+ ++ +I+ LL Y VT ++G +A+E L E+ + V
Sbjct: 448 IVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------EKNH--VF 499
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+L++ D MP M G + +++ +IP++ +++ S C++ G + LK
Sbjct: 500 --DLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCIDAGMNDIVLK 555
Query: 123 PVQLADV 129
P++ D+
Sbjct: 556 PIRSKDI 562
>TIGR_CMR|VC_1445 [details] [associations]
symbol:VC_1445 "sensor histidine kinase/response regulator"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 PIR:E82198
RefSeq:NP_231088.1 ProteinModelPortal:Q9KS16 DNASU:2614077
GeneID:2614077 KEGG:vch:VC1445 PATRIC:20081952 OMA:GTAKDIS
ProtClustDB:CLSK874379 Uniprot:Q9KS16
Length = 572
Score = 120 (47.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 32/127 (25%), Positives = 65/127 (51%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+V H+L V+D+ ++ +I+ LL Y VT ++G +A+E L E+ + V
Sbjct: 448 IVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL------EKNH--VF 499
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+L++ D MP M G + +++ +IP++ +++ S C++ G + LK
Sbjct: 500 --DLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNCIDAGMNDIVLK 555
Query: 123 PVQLADV 129
P++ D+
Sbjct: 556 PIRSKDI 562
>TIGR_CMR|GSU_2574 [details] [associations]
symbol:GSU_2574 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003607 InterPro:IPR006674 Pfam:PF00072 Pfam:PF01966
PROSITE:PS50110 SMART:SM00448 SMART:SM00471 GO:GO:0006355
GO:GO:0035556 GO:GO:0046872 GO:GO:0008152 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0008081
Gene3D:1.10.3210.10 HOGENOM:HOG000266481 RefSeq:NP_953620.1
ProteinModelPortal:Q74A17 GeneID:2686365 KEGG:gsu:GSU2574
PATRIC:22028001 KO:K07814 OMA:HTRRISE ProtClustDB:CLSK746108
BioCyc:GSUL243231:GH27-2551-MONOMER Uniprot:Q74A17
Length = 368
Score = 118 (46.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 38/130 (29%), Positives = 66/130 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD ++R+L+ +L + +TA LE L +L++ NS + +LI+ D
Sbjct: 7 VLVVDDEEMNRELLSVMLDGLATPITA----QNGLEALRVLDK----NSAI---DLILLD 55
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP + G+ L +K+ DIPV+++++ + R L GA +F KP D
Sbjct: 56 LEMPELNGFATLATLKKHPLWCDIPVIVLTASK--DEVTRTLRLGANDFLAKPY---DTE 110
Query: 131 KLKPHLMKGI 140
+L+ +M +
Sbjct: 111 ELRLRVMNHV 120
>TIGR_CMR|CBU_0634 [details] [associations]
symbol:CBU_0634 "sensory box sensor histidine
kinase/response regulator" species:227377 "Coxiella burnetii RSA
493" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 Pfam:PF13188 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0023014 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 InterPro:IPR013656 Pfam:PF08448
RefSeq:NP_819664.2 ProteinModelPortal:Q83DR2 GeneID:1208519
KEGG:cbu:CBU_0634 PATRIC:17929947 HOGENOM:HOG000026879 OMA:ICRRIAQ
ProtClustDB:CLSK914201 BioCyc:CBUR227377:GJ7S-631-MONOMER
Uniprot:Q83DR2
Length = 630
Score = 120 (47.3 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 35/130 (26%), Positives = 65/130 (50%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
++ + + VL ++D + + + + L+ +V D+ + A E L NE +
Sbjct: 506 ILKERKVRVLLIEDDKLSQNIEKIFLEEFGCKV---DTASNAEEALVKFNESYE------ 556
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESA-SLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
LI TD +P GY L+R+I++ A S K +P++ M++ N+CLE G F
Sbjct: 557 ---LICTDIGLPDKDGYALVREIRQMANSHKPVPILAMTAHVFDREKNKCLEAGMNGFIN 613
Query: 122 KPVQLADVNK 131
KPV + ++ +
Sbjct: 614 KPVTVEEIRR 623
>UNIPROTKB|Q7D1A5 [details] [associations]
symbol:cheY "Chemotaxis receiver protein" species:176299
"Agrobacterium fabrum str. C58" [GO:0006928 "cellular component
movement" evidence=IGC] [GO:0052143 "chemotaxis on or near host
involved in symbiotic interaction" evidence=IGC] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0006928 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 EMBL:AE007869 GenomeReviews:AE007869_GR
GO:GO:0052143 KO:K03413 ProtClustDB:CLSK800134 HSSP:P06143
RefSeq:NP_353549.1 ProteinModelPortal:Q7D1A5 SMR:Q7D1A5
STRING:Q7D1A5 GeneID:1132558 KEGG:atu:Atu0520 PATRIC:20810743
OMA:FKQITAA Uniprot:Q7D1A5
Length = 129
Score = 100 (40.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 27/114 (23%), Positives = 55/114 (48%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSY-QVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
VL VDD + R L+ L + Q+T+ G + L+ + ++Q + +L+I+
Sbjct: 9 VLIVDDQVTSRLLLSDALTQLGFKQITSAGDGEQGLKIM-----EQQPH------HLVIS 57
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D+ MP M G L ++ + + K +I++++ + + + + GA KP
Sbjct: 58 DFNMPKMDGLGFLHAVRANPTTKKAAFIILTAQGDRALVQKAAQLGANNVLAKP 111
>TIGR_CMR|BA_5581 [details] [associations]
symbol:BA_5581 "stage 0 sporulation protein F"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0030436 "asexual sporulation" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016740 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K02490
ProtClustDB:CLSK873695 RefSeq:NP_847737.1 RefSeq:YP_022251.1
RefSeq:YP_031424.1 HSSP:P06628 ProteinModelPortal:Q81JW3 SMR:Q81JW3
DNASU:1085276 EnsemblBacteria:EBBACT00000010293
EnsemblBacteria:EBBACT00000016210 EnsemblBacteria:EBBACT00000023627
GeneID:1085276 GeneID:2814845 GeneID:2853145 KEGG:ban:BA_5581
KEGG:bar:GBAA_5581 KEGG:bat:BAS5185 OMA:EADGAMD
BioCyc:BANT260799:GJAJ-5260-MONOMER
BioCyc:BANT261594:GJ7F-5440-MONOMER Uniprot:Q81JW3
Length = 122
Score = 100 (40.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD R L+ + + YQ +G +AL+ + N D L++ D
Sbjct: 5 ILIVDDQYGIRVLLHEVFQKEGYQTFQAANGFQALDIVKKDNPD-----------LVVLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+PGM G ++L+ +KE + I V++M++ I + GA F KP + ++
Sbjct: 54 MKIPGMDGIEILKHVKEID--ESIKVILMTAYGELDMIQEAKDLGALMHFAKPFDIDEIR 111
Query: 131 K 131
+
Sbjct: 112 Q 112
>NCBI_NP|NP_353549.1 [details] [associations]
symbol:cheY "chemotaxisreceiverprotein" species:176299
"Agrobacterium fabrum str. C58" [GO:0052143 "chemotaxis on or near
host involved in symbiotic interaction" evidence=IGC] [GO:0006928
"cellular component movement" evidence=IGC] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS]
REFSEQ:NC_003062 Ncbi:NP_353549
Length = 129
Score = 100 (40.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 27/114 (23%), Positives = 55/114 (48%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSY-QVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
VL VDD + R L+ L + Q+T+ G + L+ + ++Q + +L+I+
Sbjct: 9 VLIVDDQVTSRLLLSDALTQLGFKQITSAGDGEQGLKIM-----EQQPH------HLVIS 57
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D+ MP M G L ++ + + K +I++++ + + + + GA KP
Sbjct: 58 DFNMPKMDGLGFLHAVRANPTTKKAAFIILTAQGDRALVQKAAQLGANNVLAKP 111
>CGD|CAL0003344 [details] [associations]
symbol:SLN1 species:5476 "Candida albicans" [GO:0007234
"osmosensory signaling via phosphorelay pathway" evidence=IGI]
[GO:0004673 "protein histidine kinase activity" evidence=ISS;IDA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0006469
"negative regulation of protein kinase activity" evidence=IEA]
[GO:0005034 "osmosensor activity" evidence=IEA] [GO:0009927
"histidine phosphotransfer kinase activity" evidence=IEA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00304 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 CGD:CAL0003344 GO:GO:0016021
GO:GO:0005524 GO:GO:0036180 GO:GO:1900445 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0004673 EMBL:AACQ01000049
EMBL:AACQ01000048 GO:GO:0007234 GO:GO:0097308 KO:K11231
RefSeq:XP_717880.1 RefSeq:XP_717946.1 ProteinModelPortal:Q5A872
SMR:Q5A872 STRING:Q5A872 GeneID:3640422 GeneID:3640485
KEGG:cal:CaO19.10766 KEGG:cal:CaO19.3256 Uniprot:Q5A872
Length = 1373
Score = 122 (48.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 31/127 (24%), Positives = 61/127 (48%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSY-QVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
S VL +D+ +++++I R+LK +T +G KA++F+ E + N +
Sbjct: 1242 SHLRVLVAEDNSVNQEVISRMLKQEGITNLTMACNGAKAIDFV---KESIENNENF---D 1295
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
LI D MP + G + I+++ P++ +++ S + CL G F KP+
Sbjct: 1296 LIFMDVQMPEVDGLKATKMIRKNLQYNK-PIIALTAFADESNVKECLNSGMSGFITKPIS 1354
Query: 126 LADVNKL 132
++ K+
Sbjct: 1355 KTNIKKV 1361
>UNIPROTKB|Q5A872 [details] [associations]
symbol:SLN1 "Potential response regulator protein"
species:237561 "Candida albicans SC5314" [GO:0004673 "protein
histidine kinase activity" evidence=ISS;IDA] [GO:0007234
"osmosensory signaling via phosphorelay pathway" evidence=IGI]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00304 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 CGD:CAL0003344 GO:GO:0016021
GO:GO:0005524 GO:GO:0036180 GO:GO:1900445 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0004673 EMBL:AACQ01000049
EMBL:AACQ01000048 GO:GO:0007234 GO:GO:0097308 KO:K11231
RefSeq:XP_717880.1 RefSeq:XP_717946.1 ProteinModelPortal:Q5A872
SMR:Q5A872 STRING:Q5A872 GeneID:3640422 GeneID:3640485
KEGG:cal:CaO19.10766 KEGG:cal:CaO19.3256 Uniprot:Q5A872
Length = 1373
Score = 122 (48.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 31/127 (24%), Positives = 61/127 (48%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSY-QVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
S VL +D+ +++++I R+LK +T +G KA++F+ E + N +
Sbjct: 1242 SHLRVLVAEDNSVNQEVISRMLKQEGITNLTMACNGAKAIDFV---KESIENNENF---D 1295
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
LI D MP + G + I+++ P++ +++ S + CL G F KP+
Sbjct: 1296 LIFMDVQMPEVDGLKATKMIRKNLQYNK-PIIALTAFADESNVKECLNSGMSGFITKPIS 1354
Query: 126 LADVNKL 132
++ K+
Sbjct: 1355 KTNIKKV 1361
>TIGR_CMR|GSU_1927 [details] [associations]
symbol:GSU_1927 "sensory box/response regulator"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR000014 InterPro:IPR000700 InterPro:IPR001054
InterPro:IPR001789 InterPro:IPR013655 Pfam:PF00072 Pfam:PF08447
PROSITE:PS50110 PROSITE:PS50113 SMART:SM00091 SMART:SM00448
InterPro:IPR001610 Pfam:PF00990 Pfam:PF00563 GO:GO:0006355
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
SUPFAM:SSF55073 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0016849
GO:GO:0009190 InterPro:IPR000160 SMART:SM00267 TIGRFAMs:TIGR00254
PROSITE:PS50887 Gene3D:3.20.20.450 InterPro:IPR001633 SMART:SM00052
SUPFAM:SSF141868 PROSITE:PS50883 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 HOGENOM:HOG000136246
RefSeq:NP_952976.2 GeneID:2688352 KEGG:gsu:GSU1927 PATRIC:22026719
BioCyc:GSUL243231:GH27-2001-MONOMER Uniprot:Q74BV5
Length = 708
Score = 120 (47.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 31/114 (27%), Positives = 53/114 (46%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
V+ +DD + R L R ++ + V G A+E L D +I+ D
Sbjct: 13 VMIIDDDELVRVLARRAVEQGGFAVIEAGDGVTAIEMFSRLVPD-----------IILLD 61
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MPGM G+D+ R+I+ + +++M+S + I+ E GA +F KP+
Sbjct: 62 VVMPGMGGFDVCRRIRRLPGGDRVQILVMTSLDDTGAIDEAYEAGASDFLAKPI 115
>UNIPROTKB|Q74CL9 [details] [associations]
symbol:GSU1654 "Response receiver-modulated cyclic
diguanylate phosphodiesterase" species:243231 "Geobacter
sulfurreducens PCA" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001789
InterPro:IPR003607 InterPro:IPR006674 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 SMART:SM00471 GO:GO:0006355 GO:GO:0035556
GO:GO:0046872 GO:GO:0008152 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0008081 Gene3D:1.10.3210.10
InterPro:IPR006675 TIGRFAMs:TIGR00277 HOGENOM:HOG000266481
RefSeq:NP_952705.1 ProteinModelPortal:Q74CL9 GeneID:2687011
KEGG:gsu:GSU1654 PATRIC:22026155 OMA:IVLSHQE ProtClustDB:CLSK828468
BioCyc:GSUL243231:GH27-1639-MONOMER Uniprot:Q74CL9
Length = 349
Score = 117 (46.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 35/119 (29%), Positives = 60/119 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + R L+ L Y S ++A + L LN +V L + D
Sbjct: 5 ILTVDDEEMIRDLLVTALSREGYDCFQAGSADEARDVL--LNN---------RVELALLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MPG +G DLL++IK+ ++ D V+++++ + RC+ GA+++ LKP + V
Sbjct: 54 IMMPGTSGVDLLKEIKKISA--DTVVLMVTAISDMETAMRCIHLGADDYILKPFDIERV 110
>TIGR_CMR|GSU_1654 [details] [associations]
symbol:GSU_1654 "response regulator, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001789 InterPro:IPR003607
InterPro:IPR006674 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
SMART:SM00471 GO:GO:0006355 GO:GO:0035556 GO:GO:0046872
GO:GO:0008152 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0008081
Gene3D:1.10.3210.10 InterPro:IPR006675 TIGRFAMs:TIGR00277
HOGENOM:HOG000266481 RefSeq:NP_952705.1 ProteinModelPortal:Q74CL9
GeneID:2687011 KEGG:gsu:GSU1654 PATRIC:22026155 OMA:IVLSHQE
ProtClustDB:CLSK828468 BioCyc:GSUL243231:GH27-1639-MONOMER
Uniprot:Q74CL9
Length = 349
Score = 117 (46.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 35/119 (29%), Positives = 60/119 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + R L+ L Y S ++A + L LN +V L + D
Sbjct: 5 ILTVDDEEMIRDLLVTALSREGYDCFQAGSADEARDVL--LNN---------RVELALLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MPG +G DLL++IK+ ++ D V+++++ + RC+ GA+++ LKP + V
Sbjct: 54 IMMPGTSGVDLLKEIKKISA--DTVVLMVTAISDMETAMRCIHLGADDYILKPFDIERV 110
>TIGR_CMR|GSU_0104 [details] [associations]
symbol:GSU_0104 "response regulator, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 HSSP:P10957 RefSeq:NP_951166.1
ProteinModelPortal:Q74GY9 GeneID:2688136 KEGG:gsu:GSU0104
PATRIC:22022954 OMA:NVAVARD ProtClustDB:CLSK309460
BioCyc:GSUL243231:GH27-65-MONOMER Uniprot:Q74GY9
Length = 129
Score = 99 (39.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 31/115 (26%), Positives = 54/115 (46%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L V+D+ D L R L+ Q V G +A+ G L E + + L++
Sbjct: 6 ILLVEDNPDDEFLALRALRRHGLQDVVVARDGEQAV---GQLFEA----APPLDPWLVLL 58
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D +P M G ++LR I+ + PV+++SS + + +C E G + KP+
Sbjct: 59 DLKLPKMNGLEVLRTIRSEERTRHTPVIVISSSQEETDVVKCRELGVLAYLTKPI 113
>TIGR_CMR|BA_0271 [details] [associations]
symbol:BA_0271 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P08402
RefSeq:NP_842823.1 RefSeq:YP_016879.1 RefSeq:YP_026540.1
ProteinModelPortal:Q81VD8 DNASU:1085970
EnsemblBacteria:EBBACT00000008300 EnsemblBacteria:EBBACT00000015450
EnsemblBacteria:EBBACT00000024239 GeneID:1085970 GeneID:2815661
GeneID:2850601 KEGG:ban:BA_0271 KEGG:bar:GBAA_0271 KEGG:bat:BAS0256
OMA:EAKEMPI ProtClustDB:CLSK915759
BioCyc:BANT260799:GJAJ-293-MONOMER
BioCyc:BANT261594:GJ7F-302-MONOMER Uniprot:Q81VD8
Length = 233
Score = 113 (44.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 37/129 (28%), Positives = 62/129 (48%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD R LI LK Y+V G + L LL E+E V+L++ D
Sbjct: 6 ILVVDDEKEIRNLITIYLKNEGYKVLQAGDGEEGLR---LLEENE--------VHLVVLD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ-LADV 129
MP + G + KI+E K++P++++S++ L GA+++ KP L +
Sbjct: 55 IMMPKVDGIHMCMKIREE---KEMPIIMLSAKTQDMDKILGLTTGADDYVTKPFNPLELI 111
Query: 130 NKLKPHLMK 138
++K L +
Sbjct: 112 ARIKSQLRR 120
>UNIPROTKB|Q52884 [details] [associations]
symbol:cheY2 "CheY2" species:382 "Sinorhizobium meliloti"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 EMBL:U13166
GenomeReviews:AL591688_GR PIR:S61838 PDB:1P6Q PDB:1P6U PDBsum:1P6Q
PDBsum:1P6U ProteinModelPortal:Q52884 SMR:Q52884 IntAct:Q52884
PATRIC:23630501 ProtClustDB:CLSK800134 EvolutionaryTrace:Q52884
Uniprot:Q52884
Length = 129
Score = 98 (39.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 28/114 (24%), Positives = 54/114 (47%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSY-QVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
VL VDD + R L+ L+ + Q+TA G + ++ + N +L+I+
Sbjct: 9 VLIVDDQVTSRLLLGDALQQLGFKQITAAGDGEQGMKIMA-------QNPH----HLVIS 57
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D+ MP M G LL+ ++ + + K +I++++ + + + GA KP
Sbjct: 58 DFNMPKMDGLGLLQAVRANPATKKAAFIILTAQGDRALVQKAAALGANNVLAKP 111
>ASPGD|ASPL0000043398 [details] [associations]
symbol:AN9048 species:162425 "Emericella nidulans"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003018 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 SMART:SM00065 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 EMBL:BN001307
GO:GO:0005622 GO:GO:0023014 EMBL:AACD01000168 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 RefSeq:XP_682317.1
ProteinModelPortal:Q5ARN2 EnsemblFungi:CADANIAT00007805
GeneID:2868194 KEGG:ani:AN9048.2 HOGENOM:HOG000178140 OMA:EVPIYSP
OrthoDB:EOG415KNG Uniprot:Q5ARN2
Length = 1109
Score = 120 (47.3 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/130 (28%), Positives = 59/130 (45%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD+ I+ K++ RL+ YQ T +G + E NS ++++ D
Sbjct: 989 VLIVDDNEINLKVLARLMSKLGYQHTTATNG-----LVAFTKYKESPNS----FSMVLMD 1039
Query: 71 YCMPGMTGYDLLRKIKE---SASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
MP M G D R I+ L + V ++ + + L G +E+ +KP+ L
Sbjct: 1040 ISMPVMDGIDATRNIRSYEWEKQLSSVKVFAVTGIGSAAMQHEALMAGVDEYLVKPLSLG 1099
Query: 128 DVNKL-KPHL 136
+ KL K HL
Sbjct: 1100 QLGKLMKVHL 1109
>UNIPROTKB|Q1DF43 [details] [associations]
symbol:MXAN_0460 "Response regulator" species:246197
"Myxococcus xanthus DK 1622" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:CP000113 GenomeReviews:CP000113_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2204
RefSeq:YP_628730.1 ProteinModelPortal:Q1DF43 IntAct:Q1DF43
STRING:Q1DF43 GeneID:4103270 KEGG:mxa:MXAN_0460 PATRIC:22643509
HOGENOM:HOG000025389 OMA:NLELEGH ProtClustDB:CLSK955207
BioCyc:MXAN246197:GIWU-455-MONOMER Uniprot:Q1DF43
Length = 255
Score = 113 (44.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD R + L+ + V +G +AL L ++Q+ V++++TD
Sbjct: 12 ILLVDDEESLRITLAANLELEGHTVLEAANGEEALRLL-----EKQS------VDVVLTD 60
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MPG+ G +LLR+IK+ D+PVV+M++ ++ L EGA KP
Sbjct: 61 IRMPGLHGVELLRRIKQERP--DMPVVLMTAFTAEELVDDALAEGAFTVLPKP 111
>TIGR_CMR|CHY_1125 [details] [associations]
symbol:CHY_1125 "response regulator" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR005471 Pfam:PF00072 Pfam:PF09339
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
RefSeq:YP_359971.1 ProteinModelPortal:Q3AD13 STRING:Q3AD13
GeneID:3727659 KEGG:chy:CHY_1125 PATRIC:21275390
HOGENOM:HOG000131195 OMA:RNEYLWI ProtClustDB:CLSK289825
BioCyc:CHYD246194:GJCN-1124-MONOMER Uniprot:Q3AD13
Length = 205
Score = 111 (44.1 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 21/72 (29%), Positives = 44/72 (61%)
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
++++ DY MP + G D + +I+E + +P+++++ + ++ LE GA +F LKP+
Sbjct: 46 DMVLVDYHMPALDGLDTVERIREID--QGVPIIVLTVDERQQIADKFLEVGASDFALKPI 103
Query: 125 QLAD-VNKLKPH 135
+ D + +LK H
Sbjct: 104 KAPDLIARLKVH 115
>TIGR_CMR|DET_0135 [details] [associations]
symbol:DET_0135 "DNA-binding response regulator"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072
Pfam:PF00486 PROSITE:PS50110 SMART:SM00448 SMART:SM00862
GO:GO:0006355 GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0745 HOGENOM:HOG000034819 KO:K02483
RefSeq:YP_180885.1 ProteinModelPortal:Q3ZA64 STRING:Q3ZA64
GeneID:3230499 KEGG:det:DET0135 PATRIC:21607359 OMA:CYNLAKE
ProtClustDB:CLSK837603 BioCyc:DETH243164:GJNF-135-MONOMER
Uniprot:Q3ZA64
Length = 230
Score = 112 (44.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 34/119 (28%), Positives = 60/119 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+D R+L+ L YQ+ + G KAL G+ + +L+I D
Sbjct: 6 ILVVEDDATLRELLCYNLAKEGYQLECAEDGLKAL---GMYRR--------FKPSLVILD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
+PGM G++L R I+ +S+ + + SSE ++N LE GA+++ KP + ++
Sbjct: 55 VMLPGMDGFELCRLIRAESSVPILMLTARSSET--DKVNG-LEVGADDYLSKPFGMKEL 110
>TIGR_CMR|GSU_1320 [details] [associations]
symbol:GSU_1320 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 KO:K02481
HSSP:P06143 RefSeq:NP_952373.2 GeneID:2686471 KEGG:gsu:GSU1320
PATRIC:22025417 ProtClustDB:CLSK828298
BioCyc:GSUL243231:GH27-1307-MONOMER Uniprot:Q74DJ6
Length = 461
Score = 116 (45.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD + R+++E L+ Y V SG + L DE++ + L++TD
Sbjct: 11 VLIVDDDVSLRRVLEYNLQEEGYDVITAGSGEEGLRLF-----DERSPA------LVVTD 59
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPGM G+ LL++IK + D V+++++ ++ GA ++ KP D
Sbjct: 60 LKMPGMGGFRLLQEIKGRSP--DTAVIVITAFGAVETAVDAMKAGAYDYITKPFN-RDAL 116
Query: 131 KL--KPHL-MKGIS 141
KL K L M G+S
Sbjct: 117 KLTVKKALEMLGLS 130
>TIGR_CMR|CPS_4295 [details] [associations]
symbol:CPS_4295 "putative chemotaxis response regulator
CheY" species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006935 "chemotaxis" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 RefSeq:YP_270945.1 ProteinModelPortal:Q47W77
STRING:Q47W77 GeneID:3521289 KEGG:cps:CPS_4295 PATRIC:21471447
OMA:QHEDLNT BioCyc:CPSY167879:GI48-4305-MONOMER Uniprot:Q47W77
Length = 117
Score = 96 (38.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 40/128 (31%), Positives = 64/128 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTS-SYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L DDS + RK + R L V +G +AL L + NS + ++
Sbjct: 1 MLICDDSNMARKQVLRSLPEEWKDSVQIACNGAEALTIL-------RDNS----IEILFL 49
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MPG+ G +L+ IK+ +L + V ++S++ P N+ GA+EF KPV+ AD+
Sbjct: 50 DLTMPGIDGIGVLQGIKK-LNL-NCSVFVISADIQPEMQNKVKALGAKEFMRKPVK-ADL 106
Query: 130 --NKLKPH 135
N L+ H
Sbjct: 107 LLNNLRQH 114
>TIGR_CMR|CHY_2047 [details] [associations]
symbol:CHY_2047 "DNA-binding response regulator"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 SUPFAM:SSF46894 RefSeq:YP_360866.1
ProteinModelPortal:Q3AAG8 SMR:Q3AAG8 STRING:Q3AAG8 GeneID:3727851
KEGG:chy:CHY_2047 PATRIC:21277175 KO:K07658 OMA:WGYEFSG
ProtClustDB:CLSK2772343 BioCyc:CHYD246194:GJCN-2046-MONOMER
Uniprot:Q3AAG8
Length = 231
Score = 111 (44.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 35/131 (26%), Positives = 68/131 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD +LI+ L+ Y+V G +ALE + + E + L+I D
Sbjct: 3 ILVVDDEAPIVELIKFNLEREGYKVLEAYDGIRALEIV----KKELPD-------LVILD 51
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSS--ENIPSRINRCLEEGAEEFFLKPVQLAD 128
+PGM+G ++ + I+ + +IP++++S+ E + + LE GA+++ +KP +
Sbjct: 52 IMLPGMSGLEVCKNIRNNEKTAEIPIIMLSARGEEVDKILG--LELGADDYMVKPFSPRE 109
Query: 129 -VNKLKPHLMK 138
V ++K L +
Sbjct: 110 LVARVKARLRR 120
>TIGR_CMR|GSU_2581 [details] [associations]
symbol:GSU_2581 "sigma-54 dependent transcriptional
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PROSITE:PS50045
PROSITE:PS50110 SMART:SM00382 SMART:SM00448 GO:GO:0005524
GO:GO:0035556 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025944 PROSITE:PS00688 HSSP:P06143 RefSeq:NP_953627.1
ProteinModelPortal:Q74A10 GeneID:2687775 KEGG:gsu:GSU2581
PATRIC:22028017 OMA:LTERIMA ProtClustDB:CLSK763211
BioCyc:GSUL243231:GH27-2558-MONOMER Uniprot:Q74A10
Length = 456
Score = 115 (45.5 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 35/114 (30%), Positives = 60/114 (52%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+LAVDD + ++E LL + + +TAV SG +AL L E E V+L+I+
Sbjct: 6 ILAVDDDELSLLMLENLLADAGFAPLTAV-SGAQALALL----EREH-------VDLLIS 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D M GM G +LL +++E ++PV+++++ + GA ++ KP
Sbjct: 54 DLIMEGMNGLELLDRVRER--YPNVPVIVVTARGSVESAVEAMRRGAYDYLAKP 105
>TIGR_CMR|GSU_0877 [details] [associations]
symbol:GSU_0877 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR009875 Pfam:PF00072 Pfam:PF07238 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0035438 HSSP:P06143
HOGENOM:HOG000276126 RefSeq:NP_951934.1 ProteinModelPortal:Q74ET2
GeneID:2685581 KEGG:gsu:GSU0877 PATRIC:22024519 OMA:PDIDRRE
ProtClustDB:CLSK2522230 BioCyc:GSUL243231:GH27-855-MONOMER
Uniprot:Q74ET2
Length = 248
Score = 111 (44.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 34/114 (29%), Positives = 54/114 (47%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD + +L + LL+ S +V +G +ALE + S+ + +L+ D
Sbjct: 6 VLIVDDVNLMLELEKSLLRFSPVRVFTARNGEEALELV---------RSE--RPDLVYMD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MP M G D IK L+D PV+++++ P C G + + KPV
Sbjct: 55 LNMPKMNGVDCCIAIKSDPELRDTPVIMVTTAGKPEDQELCARAGCDGYITKPV 108
>UNIPROTKB|Q74CQ4 [details] [associations]
symbol:cheY-4 "Response receiver CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
HSSP:P04042 RefSeq:NP_952670.1 ProteinModelPortal:Q74CQ4
GeneID:2687423 KEGG:gsu:GSU1619 PATRIC:22026087 OMA:DIICMDM
ProtClustDB:CLSK828443 BioCyc:GSUL243231:GH27-1579-MONOMER
Uniprot:Q74CQ4
Length = 119
Score = 95 (38.5 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 39/124 (31%), Positives = 60/124 (48%)
Query: 11 VLAVDDSI-IDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
VL VDDSI + R+L + L ++ +QV V G +E + + QT ++I
Sbjct: 4 VLIVDDSISVARQLDKILSESGEFQV--VGHGKNGMEAIRM----HQTEHP----DIICM 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPVQLAD 128
D MPGM G LR + A K+I VV+++S + + L GA KP + +
Sbjct: 54 DMNMPGMDGLTALRTLV--ALDKNIKVVMVTSLGGVGDKFTEALRLGARTVISKPFEADN 111
Query: 129 VNKL 132
V K+
Sbjct: 112 VLKI 115
>TIGR_CMR|CHY_1018 [details] [associations]
symbol:CHY_1018 "chemotaxis response regulator"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 OMA:PFQAPKV
RefSeq:YP_359865.1 ProteinModelPortal:Q3ADB9 SMR:Q3ADB9
STRING:Q3ADB9 GeneID:3728492 KEGG:chy:CHY_1018 PATRIC:21275169
BioCyc:CHYD246194:GJCN-1017-MONOMER Uniprot:Q3ADB9
Length = 121
Score = 95 (38.5 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 30/116 (25%), Positives = 56/116 (48%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTA-VDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
VL VDD+ R +I+ +L + Y+V ++G +A+E L D ++
Sbjct: 5 VLIVDDAAFMRMMIKNILVKNGYEVVGEAENGAQAVEMYKELKPD-----------VVTM 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G +R+IK+ + +++ S+ + + ++ GA +F +KP Q
Sbjct: 54 DITMPEMDGIQAVREIKKIDP--NAKIIMCSAMGQQALVMEAIQAGAIDFIVKPFQ 107
>TIGR_CMR|GSU_1619 [details] [associations]
symbol:GSU_1619 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
HSSP:P04042 RefSeq:NP_952670.1 ProteinModelPortal:Q74CQ4
GeneID:2687423 KEGG:gsu:GSU1619 PATRIC:22026087 OMA:DIICMDM
ProtClustDB:CLSK828443 BioCyc:GSUL243231:GH27-1579-MONOMER
Uniprot:Q74CQ4
Length = 119
Score = 95 (38.5 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 39/124 (31%), Positives = 60/124 (48%)
Query: 11 VLAVDDSI-IDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
VL VDDSI + R+L + L ++ +QV V G +E + + QT ++I
Sbjct: 4 VLIVDDSISVARQLDKILSESGEFQV--VGHGKNGMEAIRM----HQTEHP----DIICM 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPVQLAD 128
D MPGM G LR + A K+I VV+++S + + L GA KP + +
Sbjct: 54 DMNMPGMDGLTALRTLV--ALDKNIKVVMVTSLGGVGDKFTEALRLGARTVISKPFEADN 111
Query: 129 VNKL 132
V K+
Sbjct: 112 VLKI 115
>UNIPROTKB|P0AFJ5 [details] [associations]
symbol:phoB "PhoB transcriptional dual regulator"
species:83333 "Escherichia coli K-12" [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0001108
"bacterial-type RNA polymerase holo enzyme binding" evidence=IMP]
[GO:2000142 "regulation of DNA-dependent transcription, initiation"
evidence=IDA] [GO:0006817 "phosphate ion transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA]
InterPro:IPR001789 InterPro:IPR001867 InterPro:IPR011879
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0005737 GO:GO:0035556 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 EMBL:U73857
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0006817
eggNOG:COG0745 HOGENOM:HOG000034819 GO:GO:0001108 EMBL:X04026
PIR:A24256 RefSeq:NP_414933.1 RefSeq:YP_488691.1 PDB:1B00 PDB:1GXP
PDB:1GXQ PDB:1QQI PDB:1ZES PDB:2IYN PDB:2JB9 PDB:2JBA PDB:2Z33
PDB:3T72 PDBsum:1B00 PDBsum:1GXP PDBsum:1GXQ PDBsum:1QQI
PDBsum:1ZES PDBsum:2IYN PDBsum:2JB9 PDBsum:2JBA PDBsum:2Z33
PDBsum:3T72 ProteinModelPortal:P0AFJ5 SMR:P0AFJ5 DIP:DIP-35852N
IntAct:P0AFJ5 MINT:MINT-1313174 EnsemblBacteria:EBESCT00000002796
EnsemblBacteria:EBESCT00000016242 GeneID:12930822 GeneID:945046
KEGG:ecj:Y75_p0387 KEGG:eco:b0399 PATRIC:32115943 EchoBASE:EB0721
EcoGene:EG10728 KO:K07657 OMA:QVLEMGP ProtClustDB:PRK10161
BioCyc:EcoCyc:PHOB-MONOMER BioCyc:ECOL316407:JW0389-MONOMER
EvolutionaryTrace:P0AFJ5 Genevestigator:P0AFJ5 GO:GO:2000142
TIGRFAMs:TIGR02154 Uniprot:P0AFJ5
Length = 229
Score = 110 (43.8 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 30/95 (31%), Positives = 53/95 (55%)
Query: 53 EDEQTNSQVIQVN-----LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSR 107
E E +S V Q+N LI+ D+ +PG +G ++ +K + +DIPVV++++
Sbjct: 31 EAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEED 90
Query: 108 INRCLEEGAEEFFLKPVQLAD-VNKLKPHLMKGIS 141
R LE GA+++ KP + V ++K +M+ IS
Sbjct: 91 RVRGLETGADDYITKPFSPKELVARIKA-VMRRIS 124
>UNIPROTKB|G3LTY8 [details] [associations]
symbol:phoB "Two-component regulator protein" species:636
"Edwardsiella tarda" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001789 InterPro:IPR001867 InterPro:IPR011879
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0006817 TIGRFAMs:TIGR02154
EMBL:JN543949 Uniprot:G3LTY8
Length = 229
Score = 110 (43.8 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 35/132 (26%), Positives = 68/132 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+D R ++ +L+ + YQ +S + AL L D LI+ D
Sbjct: 5 ILVVEDETPIRDMVSFVLEQNGYQPLEAESYDGALSQLCEPYPD-----------LILLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD-V 129
+ +PG +G L++++K + ++IPV+++++ R LE GA+++ KP + V
Sbjct: 54 WMLPGGSGIQLIKQLKREPATREIPVMMLTARGEEEDRVRGLEVGADDYITKPFSPKELV 113
Query: 130 NKLKPHLMKGIS 141
++K +M+ IS
Sbjct: 114 ARIKA-VMRRIS 124
>TIGR_CMR|SO_0549 [details] [associations]
symbol:SO_0549 "chemotaxis protein CheY/response regulator
receiver domain protein" species:211586 "Shewanella oneidensis
MR-1" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0006935 "chemotaxis" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P06657
KO:K03413 RefSeq:NP_716185.2 ProteinModelPortal:Q8EJB8
GeneID:1168418 KEGG:son:SO_0549 PATRIC:23520780
HOGENOM:HOG000221832 OMA:SEANDAH ProtClustDB:CLSK905805
Uniprot:Q8EJB8
Length = 265
Score = 111 (44.1 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 35/129 (27%), Positives = 64/129 (49%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
VL VDDS + R +I+R + + +T + G +A+E + + N +LIIT
Sbjct: 147 VLVVDDSRMARNVIKRTIGNLGIKLITEAEDGAQAIELM-------RHN----MFDLIIT 195
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP + G L + I+ + +P++++SSE + ++ + G KP + V
Sbjct: 196 DYNMPSVDGLALTQFIRSESQQSHVPILMVSSEANDAHLSNVSQAGVNALCDKPFEPKLV 255
Query: 130 NKLKPHLMK 138
+L L++
Sbjct: 256 KQLLYQLLE 264
>UNIPROTKB|Q1CXR3 [details] [associations]
symbol:difD "Fibril biogenesis regulator DifD"
species:246197 "Myxococcus xanthus DK 1622" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:CP000113 GenomeReviews:CP000113_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_634810.1
ProteinModelPortal:Q1CXR3 SMR:Q1CXR3 IntAct:Q1CXR3 STRING:Q1CXR3
GeneID:4104566 KEGG:mxa:MXAN_6693 PATRIC:22655877 OMA:PFQAPKV
ProtClustDB:CLSK947176 BioCyc:MXAN246197:GIWU-6635-MONOMER
Uniprot:Q1CXR3
Length = 122
Score = 94 (38.1 bits), Expect = 0.00011, P = 0.00011
Identities = 32/119 (26%), Positives = 58/119 (48%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD+I R +I+ + + ++V ++ N LE + E ++ +L D
Sbjct: 5 VLVVDDAIFMRNMIKDIFASGGFEVVG-EAAN-GLEAVEKYKE--------LKPDLTTMD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MP +G + R+I ++ S V++ S+ S + +E GA +F +KP + DV
Sbjct: 55 IVMPFKSGIEATREIIKADS--SAVVIMCSALGQESLVMEAIEAGASDFIVKPFRAEDV 111
>TIGR_CMR|BA_5504 [details] [associations]
symbol:BA_5504 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P08402
RefSeq:NP_847664.1 RefSeq:YP_022171.1 RefSeq:YP_031352.1
ProteinModelPortal:Q81K35 DNASU:1085148
EnsemblBacteria:EBBACT00000010087 EnsemblBacteria:EBBACT00000018699
EnsemblBacteria:EBBACT00000023974 GeneID:1085148 GeneID:2819097
GeneID:2848975 KEGG:ban:BA_5504 KEGG:bar:GBAA_5504 KEGG:bat:BAS5113
OMA:NMARRVK ProtClustDB:CLSK899140
BioCyc:BANT260799:GJAJ-5188-MONOMER
BioCyc:BANT261594:GJ7F-5366-MONOMER Uniprot:Q81K35
Length = 223
Score = 109 (43.4 bits), Expect = 0.00012, P = 0.00012
Identities = 34/119 (28%), Positives = 59/119 (49%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD R LI L+ Y+V G + LE NE +++I D
Sbjct: 3 ILVVDDESSIRNLIRMQLEMEGYEVLTAADGREVLE---RWNEGP---------DVLILD 50
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
+P GY+LLR +E +DIPV+++++++ + L+ GA+++ KP A++
Sbjct: 51 VMLPDTDGYELLRLFREKD--RDIPVLMLTAKSQMNDKLLGLQLGADDYVTKPFNYAEL 107
>TIGR_CMR|CPS_2387 [details] [associations]
symbol:CPS_2387 "DNA-binding response regulator"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486
PROSITE:PS50110 SMART:SM00448 SMART:SM00862 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 SUPFAM:SSF46894 KO:K02483 RefSeq:YP_269105.1
ProteinModelPortal:Q482B3 STRING:Q482B3 GeneID:3521255
KEGG:cps:CPS_2387 PATRIC:21467857
BioCyc:CPSY167879:GI48-2450-MONOMER Uniprot:Q482B3
Length = 236
Score = 109 (43.4 bits), Expect = 0.00014, P = 0.00014
Identities = 39/116 (33%), Positives = 63/116 (54%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDD+ R+ + R L +VT+VD G KA+ E + VI +LI+
Sbjct: 3 HILIVDDNPDIRQPLARYLGDHGMRVTSVDGG-KAMR--------ETLKNSVI--DLILL 51
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRC--LEEGAEEFFLKP 123
D MPG G L R ++ ++LK IPV+++++ + +R LE GA+++ KP
Sbjct: 52 DIMMPGEDGLSLCRFVQ--SNLK-IPVILLTA--LTEDTDRVVGLEMGADDYVAKP 102
>TIGR_CMR|GSU_1003 [details] [associations]
symbol:GSU_1003 "nitrogen regulation protein NR(I)"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006808 "regulation of nitrogen utilization" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002078 InterPro:IPR002197
InterPro:IPR003593 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158
Pfam:PF02954 PRINTS:PR01590 PROSITE:PS50045 PROSITE:PS50110
SMART:SM00382 SMART:SM00448 GO:GO:0005524 GO:GO:0035556
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 KO:K07712
HSSP:P06143 RefSeq:NP_952057.1 ProteinModelPortal:Q74EF9
GeneID:2687478 KEGG:gsu:GSU1003 PATRIC:22024778 OMA:NQVRAAD
ProtClustDB:CLSK828129 BioCyc:GSUL243231:GH27-989-MONOMER
Uniprot:Q74EF9
Length = 481
Score = 113 (44.8 bits), Expect = 0.00015, P = 0.00015
Identities = 38/134 (28%), Positives = 65/134 (48%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD R ++ + L+ + V G +AL + Q+N + +L I D
Sbjct: 6 ILVADDEESMRWVLSKALRKKGFTVDLARDGEEALRLI-------QSN----EYDLAILD 54
Query: 71 YCMPGMTGYDLLRKIKESASLK-DIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MPG TG +LL K++E LK D+ +VIM++E ++ GA ++ KP L +
Sbjct: 55 IKMPGFTGLELLDKVRE---LKHDLLMVIMTAEASMKNAVEAMKRGAYDYITKPFDLDVI 111
Query: 130 NKL--KPHLMKGIS 141
+ + K H + I+
Sbjct: 112 DAIIEKVHKAREIT 125
>DICTYBASE|DDB_G0291424 [details] [associations]
symbol:DDB_G0291424 "Transcription factor SKN7"
species:44689 "Dictyostelium discoideum" [GO:0035556 "intracellular
signal transduction" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
dictyBase:DDB_G0291424 EMBL:AAFI02000177 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 RefSeq:XP_635201.1
ProteinModelPortal:Q54EN9 EnsemblProtists:DDB0183884 GeneID:8628146
KEGG:ddi:DDB_G0291424 InParanoid:Q54EN9 OMA:MCANITD
ProtClustDB:CLSZ2429563 Uniprot:Q54EN9
Length = 902
Score = 114 (45.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/124 (25%), Positives = 62/124 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+D+ + K+I ++++ ++ V +G AL+ + N + L++ D
Sbjct: 711 VLLVEDNPLQIKVISKVMERYNFDVEVASNGQMALDMF-------KANPRY---ELVLMD 760
Query: 71 YCMP---GMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
MP G+T L+R+ + LK PV+I ++++ S CL G ++F KP+
Sbjct: 761 MIMPIMDGLTATMLIREYERERGLKRTPVIIQTADSRESHKLICLAAGCDDFMTKPLDKR 820
Query: 128 DVNK 131
V++
Sbjct: 821 FVDR 824
Score = 37 (18.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 158 EEIDSADRTRTRLNDTIDINN 178
EE DS D N+ + NN
Sbjct: 831 EEFDSTDNNNNNNNNNNNNNN 851
>UNIPROTKB|P76340 [details] [associations]
symbol:yedW "predicted DNA-binding response regulator in
two-component system with YedV" species:83333 "Escherichia coli
K-12" [GO:0005622 "intracellular" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA;ISS] InterPro:IPR001789
InterPro:IPR001867 InterPro:IPR006291 InterPro:IPR016032
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0005737 GO:GO:0006355 GO:GO:0035556 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
SUPFAM:SSF46894 HOGENOM:HOG000034815 TIGRFAMs:TIGR01387 KO:K02483
PIR:E64961 RefSeq:NP_416478.2 RefSeq:YP_490219.1
ProteinModelPortal:P76340 SMR:P76340 DIP:DIP-11853N IntAct:P76340
MINT:MINT-1223015 PRIDE:P76340 EnsemblBacteria:EBESCT00000004539
EnsemblBacteria:EBESCT00000015627 GeneID:12931392 GeneID:946486
KEGG:ecj:Y75_p1936 KEGG:eco:b1969 PATRIC:32119269 EchoBASE:EB3798
EcoGene:EG14045 OMA:MTYDLWH ProtClustDB:PRK11517
BioCyc:EcoCyc:G7057-MONOMER BioCyc:ECOL316407:JW5322-MONOMER
Genevestigator:P76340 Uniprot:P76340
Length = 223
Score = 108 (43.1 bits), Expect = 0.00016, P = 0.00016
Identities = 30/120 (25%), Positives = 65/120 (54%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L ++D+ ++ + + L + Y + AV G L +L L +D+ LII D
Sbjct: 3 ILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGL-YLAL--KDDYA--------LIILD 51
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPVQLADV 129
+PGM G+ +L+ ++ + K PV+ +++ +++ R+ R L+ GA ++ +KP +++
Sbjct: 52 IMLPGMDGWQILQTLRTA---KQTPVICLTARDSVDDRV-RGLDSGANDYLVKPFSFSEL 107
>TIGR_CMR|GSU_2313 [details] [associations]
symbol:GSU_2313 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001054
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
Pfam:PF00990 GO:GO:0006355 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR SUPFAM:SSF55073 GO:GO:0016849
GO:GO:0009190 InterPro:IPR000160 SMART:SM00267 TIGRFAMs:TIGR00254
PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P08402 HOGENOM:HOG000167205 RefSeq:NP_953362.1
ProteinModelPortal:Q74AN9 GeneID:2687341 KEGG:gsu:GSU2313
PATRIC:22027481 OMA:ARYRYLC ProtClustDB:CLSK763191
BioCyc:GSUL243231:GH27-2319-MONOMER Uniprot:Q74AN9
Length = 301
Score = 110 (43.8 bits), Expect = 0.00017, P = 0.00017
Identities = 29/120 (24%), Positives = 65/120 (54%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD + R ++ L+K Y V G +A E L +++++ L + D
Sbjct: 3 ILIADDDVTSRTMLTGLMKRWGYDVVEAIDGAQAWEEL------QKSDAP----KLAVLD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIP-VVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
+ MP M G +++R+++ + S + +P +++++++N + R L+ GA+++ KP L ++
Sbjct: 53 WVMPVMDGVEVIRQVR-ARSAEHLPYILLLTAKNGTDDVIRGLDAGADDYVGKPFSLGEL 111
>TIGR_CMR|CPS_3065 [details] [associations]
symbol:CPS_3065 "DNA-binding response regulator"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0745 HOGENOM:HOG000034819
RefSeq:YP_269763.1 ProteinModelPortal:Q47ZK7 STRING:Q47ZK7
GeneID:3520016 KEGG:cps:CPS_3065 PATRIC:21469133
ProtClustDB:CLSK938167 BioCyc:CPSY167879:GI48-3114-MONOMER
Uniprot:Q47ZK7
Length = 237
Score = 108 (43.1 bits), Expect = 0.00019, P = 0.00019
Identities = 29/123 (23%), Positives = 67/123 (54%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
V + + H+L ++D +L E L+++ Y+ T + G+ A+ + L+ D
Sbjct: 8 VLNEKMHILIIEDDKEIARLTEIYLQSTGYETTIIADGSLAIAMIKKLSPD--------- 58
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLK 122
LI+ D +PG+ G++L ++ +E + P++++++ E+ S ++ L+ GA+++ K
Sbjct: 59 --LILLDLMLPGVDGFELCKQARE---FYNGPIIVLTAMEDDLSEVS-LLKLGADDYLRK 112
Query: 123 PVQ 125
P +
Sbjct: 113 PAK 115
>UNIPROTKB|P06628 [details] [associations]
symbol:spo0F "Sporulation initiation phosphotransferase F"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0005737
GO:GO:0006355 GO:GO:0035556 GO:GO:0046872 GO:GO:0030435
GO:GO:0016301 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 EMBL:Z49782 EMBL:X03497 EMBL:M11081
EMBL:M22039 PIR:A24737 RefSeq:NP_391594.1 PDB:1F51 PDB:1FSP
PDB:1NAT PDB:1PEY PDB:1PUX PDB:1SRR PDB:2FSP PDB:2FTK PDB:2JVI
PDB:2JVJ PDB:2JVK PDB:3Q15 PDBsum:1F51 PDBsum:1FSP PDBsum:1NAT
PDBsum:1PEY PDBsum:1PUX PDBsum:1SRR PDBsum:2FSP PDBsum:2FTK
PDBsum:2JVI PDBsum:2JVJ PDBsum:2JVK PDBsum:3Q15
ProteinModelPortal:P06628 SMR:P06628 DIP:DIP-58965N IntAct:P06628
EnsemblBacteria:EBBACT00000000330 GeneID:937041 KEGG:bsu:BSU37130
PATRIC:18979462 GenoList:BSU37130 KO:K02490 OMA:IRVIIMT
ProtClustDB:CLSK873695 BioCyc:BSUB:BSU37130-MONOMER
BindingDB:P06628 ChEMBL:CHEMBL3857 EvolutionaryTrace:P06628
Uniprot:P06628
Length = 124
Score = 92 (37.4 bits), Expect = 0.00019, P = 0.00019
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD R L+ + YQ +G +AL+ + D L++ D
Sbjct: 6 ILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPD-----------LVLLD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV- 129
+PGM G ++L+++K ++I V+IM++ I E GA F KP + ++
Sbjct: 55 MKIPGMDGIEILKRMKVID--ENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIR 112
Query: 130 NKLKPHL 136
+ +K +L
Sbjct: 113 DAVKKYL 119
>TIGR_CMR|SO_2547 [details] [associations]
symbol:SO_2547 "response regulator" species:211586
"Shewanella oneidensis MR-1" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 OMA:QHEDLNT
HSSP:Q56312 RefSeq:NP_718133.1 ProteinModelPortal:Q8EE43
GeneID:1170254 KEGG:son:SO_2547 PATRIC:23524721
ProtClustDB:CLSK793943 Uniprot:Q8EE43
Length = 121
Score = 92 (37.4 bits), Expect = 0.00019, P = 0.00019
Identities = 35/123 (28%), Positives = 57/123 (46%)
Query: 11 VLAVDDSIIDRKLIERLLKTS-SYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
V DDS++ RK + R L ++T +G +ALE NS +V +
Sbjct: 5 VTIADDSLMSRKAVRRALPEDWDVEITEACNGKEALE---------AANSGKAEV--LFL 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE-GAEEFFLKPVQLAD 128
D MP + G+ +L+ + E S K + +VI S +I ++ GA F KP+Q A
Sbjct: 54 DLTMPELDGFGVLKYLHEQQS-KTVVIVI--SADIQPEAKLLVDSLGAFRFLQKPLQPAQ 110
Query: 129 VNK 131
+ +
Sbjct: 111 LRE 113
>TIGR_CMR|SO_4633 [details] [associations]
symbol:SO_4633 "transcriptional regulatory protein OmpR"
species:211586 "Shewanella oneidensis MR-1" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486
PROSITE:PS50110 SMART:SM00448 SMART:SM00862 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 KO:K07659
ProtClustDB:PRK09468 OMA:AANSEQM RefSeq:NP_720149.1 HSSP:P03025
ProteinModelPortal:Q8E8N0 SMR:Q8E8N0 GeneID:1172214
KEGG:son:SO_4633 PATRIC:23528927 Uniprot:Q8E8N0
Length = 241
Score = 108 (43.1 bits), Expect = 0.00019, P = 0.00019
Identities = 36/125 (28%), Positives = 62/125 (49%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
MG T +L VDD + R L+ER L YQV + + + L E+ N
Sbjct: 1 MGQETSK---ILVVDDDMRLRALLERYLMEQGYQVRSAANAEQMDRLL------EREN-- 49
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRC--LEEGAEE 118
+LI+ D +PG G + R++++ S IP+V+++++ ++R LE GA++
Sbjct: 50 ---FHLIVLDLMLPGEDGLSICRRLRQQGST--IPIVMLTAKG--DEVDRIIGLELGADD 102
Query: 119 FFLKP 123
+ KP
Sbjct: 103 YLPKP 107
>TIGR_CMR|CPS_0681 [details] [associations]
symbol:CPS_0681 "DNA-binding response regulator"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 RefSeq:YP_267431.1 ProteinModelPortal:Q488T3
STRING:Q488T3 GeneID:3522148 KEGG:cps:CPS_0681 PATRIC:21464685
BioCyc:CPSY167879:GI48-768-MONOMER Uniprot:Q488T3
Length = 246
Score = 108 (43.1 bits), Expect = 0.00020, P = 0.00020
Identities = 30/133 (22%), Positives = 67/133 (50%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+++L V+D I + L + VT V G+ ++ + + N+ ++++
Sbjct: 2 YNILLVEDDISLADWVSEYLTEQGFNVTHVARGDLVIDVI-------KKNT----TDIVL 50
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSS--ENIPSRINRCLEEGAEEFFLKPVQ- 125
D +PG+ G ++ R I++ K +P++++++ + I LE GA+++ +KPV+
Sbjct: 51 LDVMLPGLNGIEVCRLIRQHEQSKQVPIIMLTARADEFDEVIG--LEAGADDYVIKPVRP 108
Query: 126 ---LADVNKLKPH 135
LA +N+ H
Sbjct: 109 RALLARINRQLSH 121
>UNIPROTKB|P0AEV1 [details] [associations]
symbol:rssB "regulator of RpoS" species:83333 "Escherichia
coli K-12" [GO:0000156 "phosphorelay response regulator activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0006508
"proteolysis" evidence=EXP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006508 GO:GO:0006351
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 EMBL:X66003 EMBL:M64675 PIR:A36871
RefSeq:NP_415751.1 RefSeq:YP_489503.1 PDB:3EOD PDBsum:3EOD
ProteinModelPortal:P0AEV1 SMR:P0AEV1 IntAct:P0AEV1 PRIDE:P0AEV1
EnsemblBacteria:EBESCT00000002730 EnsemblBacteria:EBESCT00000002731
EnsemblBacteria:EBESCT00000016710 GeneID:12932932 GeneID:945855
KEGG:ecj:Y75_p1208 KEGG:eco:b1235 PATRIC:32117726 EchoBASE:EB2042
EcoGene:EG12121 HOGENOM:HOG000119811 KO:K02485 OMA:MICDLAM
ProtClustDB:PRK10693 BioCyc:EcoCyc:EG12121-MONOMER
BioCyc:ECOL316407:JW1223-MONOMER EvolutionaryTrace:P0AEV1
Genevestigator:P0AEV1 Uniprot:P0AEV1
Length = 337
Score = 110 (43.8 bits), Expect = 0.00021, P = 0.00021
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 11 VLAVDDSIIDRKLIERLLKT-SSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L V+D + R L++ + + V A D G ALE LG D L+I
Sbjct: 10 ILIVEDEQVFRSLLDSWFSSLGATTVLAAD-GVDALELLGGFTPD-----------LMIC 57
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP M G LL I+ + +VI ++EN+ I + L G E+ LKPV+ D+
Sbjct: 58 DIAMPRMNGLKLLEHIRNRGDQTPV-LVISATENMAD-IAKALRLGVEDVLLKPVK--DL 113
Query: 130 NKLK 133
N+L+
Sbjct: 114 NRLR 117
>UNIPROTKB|P0A5Z6 [details] [associations]
symbol:prrA "Transcriptional regulatory protein PrrA"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0005509 "calcium ion binding"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0044110 "growth involved in
symbiotic interaction" evidence=IDA] [GO:0052572 "response to host
immune response" evidence=IEP] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0005829 GO:GO:0005886
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0035556 GO:GO:0000287 GO:GO:0003677
GO:GO:0005509 GO:GO:0052572 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 EMBL:BX842574 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0745 HOGENOM:HOG000034815 PIR:D70783
RefSeq:NP_215418.1 RefSeq:NP_335359.1 RefSeq:YP_006514256.1
PDB:1YS6 PDB:1YS7 PDBsum:1YS6 PDBsum:1YS7 ProteinModelPortal:P0A5Z6
SMR:P0A5Z6 DIP:DIP-29035N PhosSite:P12061589
EnsemblBacteria:EBMYCT00000002159 EnsemblBacteria:EBMYCT00000072508
GeneID:13318807 GeneID:885209 GeneID:926241 KEGG:mtc:MT0926
KEGG:mtu:Rv0903c KEGG:mtv:RVBD_0903c PATRIC:18123784
TubercuList:Rv0903c KO:K07671 OMA:VDDRISG ProtClustDB:CLSK790822
EvolutionaryTrace:P0A5Z6 GO:GO:0044110 Uniprot:P0A5Z6
Length = 233
Score = 107 (42.7 bits), Expect = 0.00024, P = 0.00024
Identities = 48/170 (28%), Positives = 84/170 (49%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQV-TAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
VL VDD +ER L+ S ++V TAVD G +AL + + ++ V+ +N
Sbjct: 10 VLVVDDDSDVLASLERGLRLSGFEVATAVD-GAEALRSA----TENRPDAIVLDIN---- 60
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSEN-IPSRINRCLEEGAEEFFLKPVQLAD 128
MP + G ++ ++ A D+PV ++S+ + + R+ LE GA+++ +KP LA+
Sbjct: 61 ---MPVLDGVSVVTALR--AMDNDVPVCVLSARSSVDDRVAG-LEAGADDYLVKPFVLAE 114
Query: 129 -VNKLKPHLMKGISXXXXXXXXXXXXXXGLEEIDSADRTRTRLNDTIDIN 177
V ++K L + S G E+D R R R+N +D++
Sbjct: 115 LVARVKALLRRRGSTATSSSETITV---GPLEVDIPGR-RARVNG-VDVD 159
>DICTYBASE|DDB_G0295835 [details] [associations]
symbol:dhkI-2 "histidine kinase I" species:44689
"Dictyostelium discoideum" [GO:0006928 "cellular component
movement" evidence=IGI] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 dictyBase:DDB_G0295835
dictyBase:DDB_G0273475 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GenomeReviews:CM000151_GR GO:GO:0006928 GO:GO:0005622
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 eggNOG:COG0784 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
EMBL:AAFI02000010 EMBL:AF362371 RefSeq:XP_644590.1
ProteinModelPortal:Q86AT9 PRIDE:Q86AT9 EnsemblProtists:DDB0231984
GeneID:8618954 KEGG:ddi:DDB_G0273475 OMA:HRISSIC
ProtClustDB:CLSZ2729225 Uniprot:Q86AT9
Length = 1736
Score = 116 (45.9 bits), Expect = 0.00027, P = 0.00027
Identities = 29/116 (25%), Positives = 60/116 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL +D+ +++KLI+ LL + +T G +AL+F E N ++ + I+ D
Sbjct: 1552 VLVAEDNTMNQKLIKTLLTKRGFDITIAKDGKQALDFY-----HESKNKSILY-DCILMD 1605
Query: 71 YCMPGMTGYDLLRKIKESASLKD--IPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MP ++G + I+E + + IP++ +++ + + LE G +++ KP+
Sbjct: 1606 IQMPILSGLEATCAIREIEANEGGHIPIIAVTAHAMKGDKEKFLESGVDDYVTKPI 1661
>DICTYBASE|DDB_G0273475 [details] [associations]
symbol:dhkI-1 "histidine kinase I" species:44689
"Dictyostelium discoideum" [GO:0006928 "cellular component
movement" evidence=IGI] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 dictyBase:DDB_G0295835
dictyBase:DDB_G0273475 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GenomeReviews:CM000151_GR GO:GO:0006928 GO:GO:0005622
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 eggNOG:COG0784 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
EMBL:AAFI02000010 EMBL:AF362371 RefSeq:XP_644590.1
ProteinModelPortal:Q86AT9 PRIDE:Q86AT9 EnsemblProtists:DDB0231984
GeneID:8618954 KEGG:ddi:DDB_G0273475 OMA:HRISSIC
ProtClustDB:CLSZ2729225 Uniprot:Q86AT9
Length = 1736
Score = 116 (45.9 bits), Expect = 0.00027, P = 0.00027
Identities = 29/116 (25%), Positives = 60/116 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL +D+ +++KLI+ LL + +T G +AL+F E N ++ + I+ D
Sbjct: 1552 VLVAEDNTMNQKLIKTLLTKRGFDITIAKDGKQALDFY-----HESKNKSILY-DCILMD 1605
Query: 71 YCMPGMTGYDLLRKIKESASLKD--IPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MP ++G + I+E + + IP++ +++ + + LE G +++ KP+
Sbjct: 1606 IQMPILSGLEATCAIREIEANEGGHIPIIAVTAHAMKGDKEKFLESGVDDYVTKPI 1661
>TIGR_CMR|CJE_1358 [details] [associations]
symbol:CJE_1358 "DNA-binding response regulator"
species:195099 "Campylobacter jejuni RM1221" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 PIR:A81329 RefSeq:YP_179345.1
ProteinModelPortal:Q5HTP0 STRING:Q5HTP0 GeneID:3231864
KEGG:cjr:CJE1358 PATRIC:20044514 OMA:ACIFEEI ProtClustDB:CLSK879148
BioCyc:CJEJ195099:GJC0-1384-MONOMER Uniprot:Q5HTP0
Length = 221
Score = 106 (42.4 bits), Expect = 0.00029, P = 0.00029
Identities = 32/132 (24%), Positives = 67/132 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L ++D + ++IE L Y+V D+ +AL+ E+ +L I D
Sbjct: 5 ILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAQEALDMAY-----ER------YFDLWILD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P G+ LL+++++S K P + M+S N + + + + G +++ KP +LA+++
Sbjct: 54 VKVPLGDGFSLLKELRKSG--KQTPAIFMTSLNTTNDLKQGFDAGCDDYIKKPFELAELS 111
Query: 131 -KLKPHLMKGIS 141
++K L + S
Sbjct: 112 IRVKALLKRAFS 123
>TIGR_CMR|CJE_0746 [details] [associations]
symbol:CJE_0746 "response regulator/GGDEF domain protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 GO:GO:0005622
EMBL:CP000025 GenomeReviews:CP000025_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG3706 HOGENOM:HOG000276492
RefSeq:YP_178757.1 ProteinModelPortal:Q5HVC8 STRING:Q5HVC8
GeneID:3230699 KEGG:cjr:CJE0746 PATRIC:20043221 OMA:NEFALDN
ProtClustDB:CLSK2297739 BioCyc:CJEJ195099:GJC0-763-MONOMER
Uniprot:Q5HVC8
Length = 414
Score = 110 (43.8 bits), Expect = 0.00030, P = 0.00030
Identities = 31/120 (25%), Positives = 59/120 (49%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+LA+ + +R I+++L + V A G +A+ +L N++ V LII D
Sbjct: 126 ILAMS-KLPERNEIKKILTQRQFNVLAAAHGEEAMSYL---NDNND-------VKLIIAD 174
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G++LL +++E S ++ V+++ N N + G E+ KP+ N
Sbjct: 175 VNMPVISGFELLTQVRERFSDDELGVILLGDHNDSFEANS-FKNGVNEYLFKPLSKESFN 233
>TIGR_CMR|BA_1312 [details] [associations]
symbol:BA_1312 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P08402
RefSeq:NP_843778.1 RefSeq:YP_017926.1 RefSeq:YP_027483.1
ProteinModelPortal:Q81TG5 DNASU:1086011
EnsemblBacteria:EBBACT00000008055 EnsemblBacteria:EBBACT00000016708
EnsemblBacteria:EBBACT00000023489 GeneID:1086011 GeneID:2814757
GeneID:2850086 KEGG:ban:BA_1312 KEGG:bar:GBAA_1312 KEGG:bat:BAS1213
OMA:WDEAENG ProtClustDB:CLSK916176
BioCyc:BANT260799:GJAJ-1288-MONOMER
BioCyc:BANT261594:GJ7F-1346-MONOMER Uniprot:Q81TG5
Length = 223
Score = 106 (42.4 bits), Expect = 0.00030, P = 0.00030
Identities = 30/118 (25%), Positives = 64/118 (54%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S++ VL VDD R+L+ L Y+ ++G +AL+ L +T+ +
Sbjct: 2 SKYRVLVVDDESDMRQLVGMYLDNFGYEWGEAENGKEALKKL-------ETD----HYDF 50
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIP-SRINRCLEEGAEEFFLKP 123
++ D MP M G + ++I++++ D+P++ ++++ +R+N L GA+++ +KP
Sbjct: 51 VVLDIMMPEMDGLSVCKEIRKTS---DVPIIFLTAKGEEWNRVNG-LRMGADDYIVKP 104
>ASPGD|ASPL0000049453 [details] [associations]
symbol:tcsB species:162425 "Emericella nidulans"
[GO:0004673 "protein histidine kinase activity" evidence=IGI;ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=IGI;ISS] [GO:0007234 "osmosensory signaling via
phosphorelay pathway" evidence=IGI;ISS] [GO:0006468 "protein
phosphorylation" evidence=IGI;ISS] [GO:0005886 "plasma membrane"
evidence=IGI;ISS] [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0005034 "osmosensor activity" evidence=IEA]
[GO:0009927 "histidine phosphotransfer kinase activity"
evidence=IEA] [GO:0018106 "peptidyl-histidine phosphorylation"
evidence=IEA] [GO:0006469 "negative regulation of protein kinase
activity" evidence=IEA] [GO:0070795 "positive regulation of
conidiophore development" evidence=IEA] [GO:0070787 "conidiophore
development" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0005524 GO:GO:0005887
GO:GO:0006355 EMBL:BN001307 EMBL:AACD01000029 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0000161 KO:K11231
OrthoDB:EOG4N8VCT EMBL:AB036054 RefSeq:XP_659404.1
ProteinModelPortal:Q9P4U6 STRING:Q9P4U6
EnsemblFungi:CADANIAT00008448 GeneID:2874961 KEGG:ani:AN1800.2
HOGENOM:HOG000185666 OMA:DQHRILQ Uniprot:Q9P4U6
Length = 1065
Score = 114 (45.2 bits), Expect = 0.00030, P = 0.00030
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSS-YQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+ L +D++++++++ R+L Y VT V G +A + + N +E +V +L
Sbjct: 932 KIRALVAEDNVVNQEVVLRMLALEDVYDVTVVKDGQEAYDTVKA-NMEE---GKVF--DL 985
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
I D MP + G + R I++ P+V +S+ + S I C+ G + F KP++
Sbjct: 986 IFMDIQMPNLDGIESTRLIRQMGC--SAPIVALSAFSEDSNIKDCMNSGMDMFISKPIR 1042
>UNIPROTKB|Q9P4U6 [details] [associations]
symbol:tcsB "Two-component system protein B" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000155 "phosphorelay sensor
kinase activity" evidence=IGI] [GO:0000156 "phosphorelay response
regulator activity" evidence=IGI] [GO:0000161 "MAPK cascade
involved in osmosensory signaling pathway" evidence=TAS]
[GO:0005887 "integral to plasma membrane" evidence=NAS] [GO:0023014
"signal transduction by phosphorylation" evidence=IGI]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0005887 GO:GO:0006355 EMBL:BN001307 EMBL:AACD01000029
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0000161
KO:K11231 OrthoDB:EOG4N8VCT EMBL:AB036054 RefSeq:XP_659404.1
ProteinModelPortal:Q9P4U6 STRING:Q9P4U6
EnsemblFungi:CADANIAT00008448 GeneID:2874961 KEGG:ani:AN1800.2
HOGENOM:HOG000185666 OMA:DQHRILQ Uniprot:Q9P4U6
Length = 1065
Score = 114 (45.2 bits), Expect = 0.00030, P = 0.00030
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSS-YQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+ L +D++++++++ R+L Y VT V G +A + + N +E +V +L
Sbjct: 932 KIRALVAEDNVVNQEVVLRMLALEDVYDVTVVKDGQEAYDTVKA-NMEE---GKVF--DL 985
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
I D MP + G + R I++ P+V +S+ + S I C+ G + F KP++
Sbjct: 986 IFMDIQMPNLDGIESTRLIRQMGC--SAPIVALSAFSEDSNIKDCMNSGMDMFISKPIR 1042
>TIGR_CMR|SO_4003 [details] [associations]
symbol:SO_4003 "response regulator" species:211586
"Shewanella oneidensis MR-1" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789
InterPro:IPR003607 InterPro:IPR006674 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 SMART:SM00471 GO:GO:0006355 GO:GO:0035556
GO:GO:0046872 GO:GO:0008152 GO:GO:0005622 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0008081 Gene3D:1.10.3210.10 HSSP:Q9A5I4
HOGENOM:HOG000266481 KO:K07814 RefSeq:NP_719533.1
ProteinModelPortal:Q8EAA5 GeneID:1171631 KEGG:son:SO_4003
PATRIC:23527676 OMA:FVTAKTD ProtClustDB:CLSK577304 Uniprot:Q8EAA5
Length = 357
Score = 109 (43.4 bits), Expect = 0.00033, P = 0.00033
Identities = 37/129 (28%), Positives = 64/129 (49%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS + +++ LL + Y + A SG KAL + E +LI+ D
Sbjct: 10 VLVVDDSADNIQILHGLL-SDKYSIRAATSGAKALALAAI----EP------MPDLILLD 58
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSEN--IPSRINRCLEEGAEEFFLKPVQLAD 128
MP M G+ ++K + + IP++ ++++ + R E GA ++ KPV+ A
Sbjct: 59 VMMPEMDGFQTCIRLKHNPLTRHIPIIFVTAKTDIVDERTG--FELGAVDYISKPVKPAI 116
Query: 129 VN-KLKPHL 136
+ ++K HL
Sbjct: 117 LEARVKTHL 125
>TIGR_CMR|CHY_1855 [details] [associations]
symbol:CHY_1855 "sigma-54 dependent transcriptional
regulator/response regulator" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2204
HOGENOM:HOG000058489 InterPro:IPR025662 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00688 RefSeq:YP_360675.1
ProteinModelPortal:Q3AB09 STRING:Q3AB09 GeneID:3727631
KEGG:chy:CHY_1855 PATRIC:21276809 KO:K02481 OMA:NTRELFH
ProtClustDB:CLSK928866 BioCyc:CHYD246194:GJCN-1854-MONOMER
Uniprot:Q3AB09
Length = 443
Score = 110 (43.8 bits), Expect = 0.00033, P = 0.00033
Identities = 37/120 (30%), Positives = 63/120 (52%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD R L+ + L Y+V +G +AL+FL E+T +L I D
Sbjct: 7 VLVVDDEENFRDLLIQRLTRKGYEVKGAATGEEALQFL-----KEET------FHLAIFD 55
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSEN-IPSRINRCLEEGAEEFFLKPVQLADV 129
MPG+ G +LL++ ++ +++ V+I++ I S I ++ GA ++ KP LA++
Sbjct: 56 IKMPGIDGIELLQRARQLD--ENLQVIILTGHGTIESAIG-AMKLGAYDYLTKPCNLAEL 112
>TIGR_CMR|BA_1877 [details] [associations]
symbol:BA_1877 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819
RefSeq:NP_844293.1 RefSeq:YP_018518.1 RefSeq:YP_028003.1
HSSP:Q9WXY0 ProteinModelPortal:Q81S03 DNASU:1087421
EnsemblBacteria:EBBACT00000008114 EnsemblBacteria:EBBACT00000014243
EnsemblBacteria:EBBACT00000023021 GeneID:1087421 GeneID:2817591
GeneID:2853065 KEGG:ban:BA_1877 KEGG:bar:GBAA_1877 KEGG:bat:BAS1739
OMA:ANLMQEG ProtClustDB:CLSK584084
BioCyc:BANT260799:GJAJ-1808-MONOMER
BioCyc:BANT261594:GJ7F-1884-MONOMER Uniprot:Q81S03
Length = 232
Score = 106 (42.4 bits), Expect = 0.00033, P = 0.00033
Identities = 44/171 (25%), Positives = 80/171 (46%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + + L ++V + +G +ALE + N+ IQ L I D
Sbjct: 6 ILIVDDDQDIVRFMNVNLMQEGFKVFSAYNGEEALEII---------NNNSIQ--LAILD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL--EEGAEEFFLKPVQLAD 128
MP M G +L R+I+E SL P++ +S+++ S +++ + GA+++ +KP +
Sbjct: 55 IMMPQMDGIELCRRIREKHSL---PIIFLSAKS--SDVDKVVGFSTGADDYIVKPFSTIE 109
Query: 129 -VNKLKPHLMKG--ISXXXXXXXXXXXXXXGLEEIDSADRTRTRLNDTIDI 176
+ ++K L + + GLE ID RT +TI++
Sbjct: 110 FIARVKAQLRRYTYFNQNAVQVIEKKINIRGLE-IDEVSRTVMLYGETINL 159
>TIGR_CMR|SO_3457 [details] [associations]
symbol:SO_3457 "sensor histidine kinase/response regulator"
species:211586 "Shewanella oneidensis MR-1" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003660
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF00672
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073 SMART:SM00304
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0016021 GO:GO:0005524 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0023014
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 HOGENOM:HOG000272329 OMA:ANQVISQ
ProtClustDB:PRK11107 InterPro:IPR019247 Pfam:PF09984
RefSeq:NP_719006.2 ProteinModelPortal:Q8EBQ2 GeneID:1171133
PATRIC:23526610 Uniprot:Q8EBQ2
Length = 935
Score = 113 (44.8 bits), Expect = 0.00035, P = 0.00035
Identities = 33/117 (28%), Positives = 58/117 (49%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD+ + KLI+ LL V AV+SG +A++ Q ++ +LI D
Sbjct: 684 VLAVDDNFANLKLIDTLLNELVTTVIAVNSGEEAVK---------QAKTRTF--DLIFMD 732
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
MPG G ++I++ + ++ P++ +++ I L G + + KP+ A
Sbjct: 733 IQMPGTDGISATKQIRQGSMNRNTPIIAVTAHAIAEERELILGSGMDGYLPKPIDEA 789
>TIGR_CMR|GSU_1879 [details] [associations]
symbol:GSU_1879 "DNA-binding response regulator"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P08402
RefSeq:NP_952928.1 ProteinModelPortal:Q74BZ8 GeneID:2688525
KEGG:gsu:GSU1879 PATRIC:22026623 OMA:SHVESGE ProtClustDB:CLSK828616
BioCyc:GSUL243231:GH27-1891-MONOMER Uniprot:Q74BZ8
Length = 238
Score = 106 (42.4 bits), Expect = 0.00035, P = 0.00035
Identities = 36/124 (29%), Positives = 66/124 (53%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T+ + H+L V+D I + I L+ Y+V+ V+SG ALE L D +
Sbjct: 1 MTEDKPHILLVEDEIHLARGICFNLEMEGYRVSHVESGEAALE---RLTYD--------R 49
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSE-NIPSRINRCLEEGAEEFFLK 122
LII D +PG+ G+ + +++ A+ +P++I+++ + RI L+ GA+++ K
Sbjct: 50 FALIILDVMLPGIDGFTVCERVR--ATDARVPILILTARADDGDRITG-LDRGADDYLTK 106
Query: 123 PVQL 126
P L
Sbjct: 107 PFNL 110
>UNIPROTKB|Q9KNL8 [details] [associations]
symbol:VC_2714 "Transcriptional regulator OmpR"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0035556 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 KO:K07659 ProtClustDB:PRK09468 OMA:AANSEQM
HSSP:P03025 PIR:C82042 RefSeq:NP_232341.1 ProteinModelPortal:Q9KNL8
SMR:Q9KNL8 DNASU:2615542 GeneID:2615542 KEGG:vch:VC2714
PATRIC:20084446 Uniprot:Q9KNL8
Length = 240
Score = 106 (42.4 bits), Expect = 0.00036, P = 0.00036
Identities = 34/115 (29%), Positives = 63/115 (54%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD R L+ER L +QV +V +G + ++ L L E+ +L++ D
Sbjct: 7 VLVVDDDARLRALLERYLSEQGFQVRSVANGEQ-MDRL-LTREN---------FHLMVLD 55
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRC--LEEGAEEFFLKP 123
+PG G + R+++ S ++ IP+++++++ I+R LE GA+++ KP
Sbjct: 56 LMLPGEDGLSICRRLRNSNNM--IPILMLTAKG--DEIDRIVGLEVGADDYLPKP 106
>TIGR_CMR|VC_2714 [details] [associations]
symbol:VC_2714 "transcriptional regulator OmpR,"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0035556 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 KO:K07659 ProtClustDB:PRK09468 OMA:AANSEQM
HSSP:P03025 PIR:C82042 RefSeq:NP_232341.1 ProteinModelPortal:Q9KNL8
SMR:Q9KNL8 DNASU:2615542 GeneID:2615542 KEGG:vch:VC2714
PATRIC:20084446 Uniprot:Q9KNL8
Length = 240
Score = 106 (42.4 bits), Expect = 0.00036, P = 0.00036
Identities = 34/115 (29%), Positives = 63/115 (54%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD R L+ER L +QV +V +G + ++ L L E+ +L++ D
Sbjct: 7 VLVVDDDARLRALLERYLSEQGFQVRSVANGEQ-MDRL-LTREN---------FHLMVLD 55
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRC--LEEGAEEFFLKP 123
+PG G + R+++ S ++ IP+++++++ I+R LE GA+++ KP
Sbjct: 56 LMLPGEDGLSICRRLRNSNNM--IPILMLTAKG--DEIDRIVGLEVGADDYLPKP 106
>UNIPROTKB|P74294 [details] [associations]
symbol:slr1693 "PatA subfamily" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 EMBL:BA000022 GenomeReviews:BA000022_GR PIR:S75929
RefSeq:NP_441708.1 RefSeq:YP_005651766.1 ProteinModelPortal:P74294
DIP:DIP-36643N IntAct:P74294 STRING:P74294 GeneID:12254421
GeneID:953001 KEGG:syn:slr1693 KEGG:syy:SYNGTS_1813 PATRIC:23840894
HOGENOM:HOG000035632 OMA:CIDDSET ProtClustDB:CLSK892620
InterPro:IPR024186 PIRSF:PIRSF005897 Uniprot:P74294
Length = 380
Score = 109 (43.4 bits), Expect = 0.00036, P = 0.00036
Identities = 42/135 (31%), Positives = 65/135 (48%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
TD + V VD + ++++ L+ Y+ +D +AL L LN
Sbjct: 252 TDDRPLVAYVDHREVQQRMMTYSLEKEGYRALVLDDPFRALTVL--LNSPP--------- 300
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPS--RINRCLEEG-AEEFF 120
NLII + +P M GY L ++S LKD+P++++ +N+ S RI C G E F
Sbjct: 301 NLIIINTDLPDMNGYQLCSFCRKSNQLKDVPILLLGKGDNLISGIRIKLCQASGYLSEPF 360
Query: 121 LKPVQLAD-VNKLKP 134
+ P +L D V KL P
Sbjct: 361 V-PEELLDRVAKLLP 374
>ASPGD|ASPL0000016988 [details] [associations]
symbol:srrC species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:BN001302 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 EMBL:AACD01000067 RefSeq:XP_661738.1
ProteinModelPortal:Q5B5P6 EnsemblFungi:CADANIAT00004538
GeneID:2873550 KEGG:ani:AN4134.2 HOGENOM:HOG000200821
OrthoDB:EOG412QGQ Uniprot:Q5B5P6
Length = 171
Score = 102 (41.0 bits), Expect = 0.00037, P = 0.00037
Identities = 32/125 (25%), Positives = 62/125 (49%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L +D+ +++KL+ RLL+ S V+ +G +AL++L + T+ + ++I+
Sbjct: 3 HILVAEDNKVNQKLVTRLLQRLSCTVSIAHNGQEALDYL---SASPATHHRP---DVILM 56
Query: 70 DYCMPGMTGY---DLLRK---IKESASLKDIPVVIMS--SENIPSRINRCLEEGAEEFFL 121
D MP M G +LR + P++ M+ S +P + L+ G ++
Sbjct: 57 DTAMPVMDGIRATSILRTSLPFTVDPKIPTTPIIAMTPISLRVPGQTEEWLKRGFDDVLP 116
Query: 122 KPVQL 126
KP +L
Sbjct: 117 KPFRL 121
>TIGR_CMR|BA_3261 [details] [associations]
symbol:BA_3261 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P08402
RefSeq:NP_845560.1 RefSeq:YP_019897.1 RefSeq:YP_029285.1
ProteinModelPortal:Q81NE3 DNASU:1089115
EnsemblBacteria:EBBACT00000011389 EnsemblBacteria:EBBACT00000014025
EnsemblBacteria:EBBACT00000020758 GeneID:1089115 GeneID:2818827
GeneID:2853015 KEGG:ban:BA_3261 KEGG:bar:GBAA_3261 KEGG:bat:BAS3028
OMA:FELCKKM ProtClustDB:CLSK916983
BioCyc:BANT260799:GJAJ-3090-MONOMER
BioCyc:BANT261594:GJ7F-3193-MONOMER Uniprot:Q81NE3
Length = 225
Score = 105 (42.0 bits), Expect = 0.00041, P = 0.00041
Identities = 32/120 (26%), Positives = 60/120 (50%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L DD R+L+ L+ ++V + G A E L E+ N ++L I
Sbjct: 5 HILLADDDKHIRELLHYHLQKEGFKVFEAEDGKVAQEVL------EKEN-----IHLAIV 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP + GY L +I++ DIPV+++++++ + G +++ +KP + A+V
Sbjct: 54 DIMMPFVDGYTLCEEIRK---YHDIPVILLTAKDQLVDKEKGFISGTDDYIVKPFEPAEV 110
>UNIPROTKB|Q8ECL4 [details] [associations]
symbol:cheV "Chemotaxis signal transduction system response
regulator CheV" species:211586 "Shewanella oneidensis MR-1"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 InterPro:IPR002545
Pfam:PF00072 Pfam:PF01584 PROSITE:PS50110 PROSITE:PS50851
SMART:SM00260 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0016740 GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341
HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181 PIRSF:PIRSF002867
RefSeq:NP_718684.1 ProteinModelPortal:Q8ECL4 DNASU:1170812
GeneID:1170812 KEGG:son:SO_3123 PATRIC:23525892 OMA:TDCQRMV
ProtClustDB:CLSK869841 Uniprot:Q8ECL4
Length = 299
Score = 107 (42.7 bits), Expect = 0.00042, P = 0.00042
Identities = 29/129 (22%), Positives = 66/129 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS + RK + L + + G +AL + EQ ++ ++++++D
Sbjct: 172 ILLVDDSKVARKQLSDALDSINIPYFVTPDGREALSIM------EQAAAEHHPIDILVSD 225
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG+ GY+L +++++ L + +++ +S + +++ + GA E K D +
Sbjct: 226 IEMPGLDGYELAFEVRDNPLLANAYIILHTSLSSEISVSQAHQVGANEALTK----FDAH 281
Query: 131 KLKPHLMKG 139
+L +++G
Sbjct: 282 ELVEAMLRG 290
>TIGR_CMR|SO_3123 [details] [associations]
symbol:SO_3123 "chemotaxis protein CheV" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0016740 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF50341
HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181 PIRSF:PIRSF002867
RefSeq:NP_718684.1 ProteinModelPortal:Q8ECL4 DNASU:1170812
GeneID:1170812 KEGG:son:SO_3123 PATRIC:23525892 OMA:TDCQRMV
ProtClustDB:CLSK869841 Uniprot:Q8ECL4
Length = 299
Score = 107 (42.7 bits), Expect = 0.00042, P = 0.00042
Identities = 29/129 (22%), Positives = 66/129 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS + RK + L + + G +AL + EQ ++ ++++++D
Sbjct: 172 ILLVDDSKVARKQLSDALDSINIPYFVTPDGREALSIM------EQAAAEHHPIDILVSD 225
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG+ GY+L +++++ L + +++ +S + +++ + GA E K D +
Sbjct: 226 IEMPGLDGYELAFEVRDNPLLANAYIILHTSLSSEISVSQAHQVGANEALTK----FDAH 281
Query: 131 KLKPHLMKG 139
+L +++G
Sbjct: 282 ELVEAMLRG 290
>TIGR_CMR|GSU_3198 [details] [associations]
symbol:GSU_3198 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 RefSeq:NP_954239.1
HSSP:P04042 ProteinModelPortal:Q747R7 GeneID:2687002
KEGG:gsu:GSU3198 PATRIC:22029251 OMA:PSARIIM ProtClustDB:CLSK829154
BioCyc:GSUL243231:GH27-3148-MONOMER Uniprot:Q747R7
Length = 121
Score = 89 (36.4 bits), Expect = 0.00043, P = 0.00043
Identities = 33/130 (25%), Positives = 61/130 (46%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDS-GNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
V+ VDD++ R ++ +L+ + Y+V A S G +A+ + ++ +++
Sbjct: 5 VMIVDDALFMRNMLRGILEDAGYEVVAEASDGAEAV-----------VTFRDVRPDVVTL 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP G + LR+I A VVI S+ S +++ GA++F LKP V
Sbjct: 54 DIIMPVKNGIEALREIM--AIDPKARVVICSAVGQESLVDKARSVGAKDFILKPFNPERV 111
Query: 130 NKLKPHLMKG 139
+ + +G
Sbjct: 112 KDVMKQVTEG 121
>TIGR_CMR|BA_4777 [details] [associations]
symbol:BA_4777 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819 HSSP:P08402
RefSeq:NP_846982.1 RefSeq:YP_021423.1 RefSeq:YP_030680.1
ProteinModelPortal:Q81L55 DNASU:1083888
EnsemblBacteria:EBBACT00000012704 EnsemblBacteria:EBBACT00000017584
EnsemblBacteria:EBBACT00000020354 GeneID:1083888 GeneID:2815717
GeneID:2851624 KEGG:ban:BA_4777 KEGG:bar:GBAA_4777 KEGG:bat:BAS4433
OMA:DISIQEM ProtClustDB:CLSK917419
BioCyc:BANT260799:GJAJ-4490-MONOMER
BioCyc:BANT261594:GJ7F-4640-MONOMER Uniprot:Q81L55
Length = 230
Score = 105 (42.0 bits), Expect = 0.00043, P = 0.00043
Identities = 29/120 (24%), Positives = 61/120 (50%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L V+D + ++++E+ L +QVT G + + D +LII
Sbjct: 4 HILLVEDDLSIQEMVEKYLVKEGFQVTIASDGEEGV--------DTYLKGSF---DLIIL 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP + G +++R I+E ++ +P+++MS+++ L GA+++ KP + ++
Sbjct: 53 DIMMPKLDGLEVVRIIREKSA---VPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIEL 109
>TIGR_CMR|CPS_0651 [details] [associations]
symbol:CPS_0651 "DNA-binding response regulator"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486
PROSITE:PS50110 SMART:SM00448 SMART:SM00862 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 SUPFAM:SSF46894 RefSeq:YP_267401.1
ProteinModelPortal:Q488W3 STRING:Q488W3 GeneID:3522831
KEGG:cps:CPS_0651 PATRIC:21464627 OMA:LEEDCTE
ProtClustDB:CLSK757378 BioCyc:CPSY167879:GI48-738-MONOMER
Uniprot:Q488W3
Length = 260
Score = 106 (42.4 bits), Expect = 0.00044, P = 0.00044
Identities = 34/122 (27%), Positives = 64/122 (52%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
++L ++D I KLI+ L GN+AL+ L +D Q LI+
Sbjct: 4 NILIIEDEIDIAKLIKVHLSELDLNCDICTQGNEALQ--QALTKDYQ---------LILL 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL--EEGAEEFFLKPVQLA 127
D +PG++G D+ R++++ L+ I ++++S+ S I+R L E GA+++ KP +
Sbjct: 53 DVMLPGISGLDICRQVRQEKPLQSI--IMLTSKT--SEIDRILGLELGADDYMTKPFSVR 108
Query: 128 DV 129
++
Sbjct: 109 EL 110
>TIGR_CMR|SO_1558 [details] [associations]
symbol:SO_1558 "phosphate regulon response regulator PhoB"
species:211586 "Shewanella oneidensis MR-1" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 InterPro:IPR011879 Pfam:PF00072 Pfam:PF00486
PROSITE:PS50110 SMART:SM00448 SMART:SM00862 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0006817
HOGENOM:HOG000034819 HSSP:P08402 KO:K07657 OMA:QVLEMGP
TIGRFAMs:TIGR02154 RefSeq:NP_717171.2 ProteinModelPortal:Q8EGP1
GeneID:1169364 KEGG:son:SO_1558 PATRIC:23522760
ProtClustDB:CLSK906318 Uniprot:Q8EGP1
Length = 229
Score = 101 (40.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 25/113 (22%), Positives = 58/113 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+D + R+++ +++ + +A + + A+ LL E +LI+ D
Sbjct: 5 ILIVEDELAIREMLTFVMEQHGFTTSAAEDFDSAI---ALLKEPYP--------DLILLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+ PG +G L +++K+ + IP++++++ + LE GA+++ KP
Sbjct: 54 WMFPGGSGIQLAKRLKQDEFTRQIPIIMLTARGEEEDKVKGLEVGADDYITKP 106
Score = 34 (17.0 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 168 TRLNDTIDI 176
TRL +TID+
Sbjct: 126 TRLEETIDV 134
>TIGR_CMR|SO_3196 [details] [associations]
symbol:SO_3196 "response regulator" species:211586
"Shewanella oneidensis MR-1" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P10958 RefSeq:NP_718751.1
ProteinModelPortal:Q8ECE7 GeneID:1170890 KEGG:son:SO_3196
PATRIC:23526076 HOGENOM:HOG000289704 OMA:GLLDWGK
ProtClustDB:CLSK907046 Uniprot:Q8ECE7
Length = 367
Score = 108 (43.1 bits), Expect = 0.00045, P = 0.00045
Identities = 31/130 (23%), Positives = 67/130 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+D + R+++ L QV G + GL++ +Q + ++I+ D
Sbjct: 8 ILWVEDDPVFRQIVATFLSGRGAQVVQAGDGEQ-----GLIHFKQQ------RFDIILAD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP + G D+L+++ + L +P +++S N+ + + L GA ++ +KPV AD+
Sbjct: 57 LSMPKLGGLDMLKEMSKLEPL--VPSIVISGNNVMADVVEALRIGACDYLVKPV--ADLF 112
Query: 131 KLKPHLMKGI 140
++ + +G+
Sbjct: 113 IIEQAIQQGL 122
>TIGR_CMR|GSU_0149 [details] [associations]
symbol:GSU_0149 "sensor histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 HSSP:P06143 RefSeq:NP_951211.1
ProteinModelPortal:Q74GU5 GeneID:2687911 KEGG:gsu:GSU0149
PATRIC:22023046 HOGENOM:HOG000135524 OMA:ISHKFRT
ProtClustDB:CLSK827668 BioCyc:GSUL243231:GH27-183-MONOMER
Uniprot:Q74GU5
Length = 371
Score = 108 (43.1 bits), Expect = 0.00046, P = 0.00046
Identities = 34/116 (29%), Positives = 56/116 (48%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + R L + LK Y+V G +AL E+ +++I+TD
Sbjct: 16 ILVVDDESVIRDLCAKALK--GYRVLQAGDGEEALRLF------ERGG-----IDVILTD 62
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
MP + G +LLR++KE + V++M+ I L+ A++F KP+ L
Sbjct: 63 VMMPKLNGIELLRRLKEMEPT--LVVIVMTGYAEKDIILNALKADADDFITKPLNL 116
>TIGR_CMR|CPS_4164 [details] [associations]
symbol:CPS_4164 "response regulator/phosphatase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0016791 "phosphatase activity" evidence=ISS] InterPro:IPR001789
InterPro:IPR003607 InterPro:IPR006674 Pfam:PF00072 Pfam:PF01966
PROSITE:PS50110 SMART:SM00448 SMART:SM00471 GO:GO:0006355
GO:GO:0035556 GO:GO:0046872 GO:GO:0008152 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0008081 eggNOG:COG3437
Gene3D:1.10.3210.10 HOGENOM:HOG000266481 RefSeq:YP_270816.1
ProteinModelPortal:Q47WK6 STRING:Q47WK6 GeneID:3518511
KEGG:cps:CPS_4164 PATRIC:21471189 OMA:CELIYNA
BioCyc:CPSY167879:GI48-4174-MONOMER Uniprot:Q47WK6
Length = 352
Score = 107 (42.7 bits), Expect = 0.00056, P = 0.00056
Identities = 30/116 (25%), Positives = 60/116 (51%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD+ + ++ +L+ Y+V A +G AL+ N+ + +I+ D
Sbjct: 16 VLIVDDNSDNLDVLSGVLRPF-YKVKAAINGELALKVASAKNKPD----------IILLD 64
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
MPGM GY++ +++K + S +IPV+ ++++ + GA ++ KP+ +
Sbjct: 65 IMMPGMDGYEVCQQLKLNPSTANIPVIFVTAKTETKDEEAGFKLGAVDYITKPISV 120
>TIGR_CMR|DET_0232 [details] [associations]
symbol:DET_0232 "DNA-binding response regulator"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001789 InterPro:IPR001867 Pfam:PF00072
Pfam:PF00486 PROSITE:PS50110 SMART:SM00448 SMART:SM00862
GO:GO:0006355 GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0745 HOGENOM:HOG000034819
RefSeq:YP_180980.1 ProteinModelPortal:Q3Z9W9 STRING:Q3Z9W9
GeneID:3230435 KEGG:det:DET0232 PATRIC:21607535 OMA:SIRELWI
ProtClustDB:CLSK741610 BioCyc:DETH243164:GJNF-232-MONOMER
Uniprot:Q3Z9W9
Length = 227
Score = 104 (41.7 bits), Expect = 0.00058, P = 0.00058
Identities = 36/129 (27%), Positives = 67/129 (51%)
Query: 11 VLAVDDS-IIDRKLIERLLKTS--SYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+L DD+ I+D +I + + S + +V + SG K +E + +N D +I
Sbjct: 4 LLIEDDAEIVD--VISTIFQISCPNSRVISASSGRKGIESVESVNPD-----------II 50
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ-- 125
+ D +P M G+D+L++I+ + D+P++I++ S + R L GA ++ KP +
Sbjct: 51 LLDLGLPDMNGFDVLKQIR---NFSDVPIIILTVRGDESDVVRGLTLGANDYITKPFRQM 107
Query: 126 --LADVNKL 132
LA V +L
Sbjct: 108 ELLARVRRL 116
>TIGR_CMR|GSU_2915 [details] [associations]
symbol:GSU_2915 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PRINTS:PR01590
PROSITE:PS50045 PROSITE:PS50110 SMART:SM00382 SMART:SM00448
GO:GO:0005524 GO:GO:0035556 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 RefSeq:NP_953957.1
ProteinModelPortal:Q748T6 GeneID:2688534 KEGG:gsu:GSU2915
PATRIC:22028689 OMA:AFRYRMK ProtClustDB:CLSK829000
BioCyc:GSUL243231:GH27-2910-MONOMER Uniprot:Q748T6
Length = 457
Score = 108 (43.1 bits), Expect = 0.00064, P = 0.00064
Identities = 32/120 (26%), Positives = 61/120 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + R +E+ LK Y V + +G AL ++ E+ Q +L++ D
Sbjct: 6 ILVVDDEHLIRWSLEQNLKKQGYDVVSAGNGEDALR---IVREE--------QPDLVLLD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+PG++G + L KIKE ++I V+++++ + GA ++ KP L +++
Sbjct: 55 IQLPGISGLEALEKIKEYD--EEILVIMVTAHGALETAVHAMRLGAYDYINKPFNLDEMS 112
>TIGR_CMR|ECH_0773 [details] [associations]
symbol:ECH_0773 "putative response regulator/diguanylate
cyclase" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 GO:GO:0006355 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0005622 SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG3706 KO:K02488 HOGENOM:HOG000167204
ProtClustDB:PRK09581 RefSeq:YP_507571.1 ProteinModelPortal:Q2GG62
STRING:Q2GG62 GeneID:3927207 KEGG:ech:ECH_0773 PATRIC:20576976
OMA:PDICARY BioCyc:ECHA205920:GJNR-776-MONOMER Uniprot:Q2GG62
Length = 458
Score = 108 (43.1 bits), Expect = 0.00064, P = 0.00064
Identities = 31/115 (26%), Positives = 58/115 (50%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD + KL++ L + Y V +G A++ + E++ + +I+ D
Sbjct: 5 VLIVDDLPANIKLLQAKLMSEYYNVLTATNGMDAIK----IAEEKHPD-------IILLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPV 124
MP M GY+ +++K + IP+V++++ +N L GA++F KP+
Sbjct: 54 VMMPEMDGYETCKRLKSNPETTYIPIVMVTALDNTSDNRVSGLSYGADDFLTKPI 108
>TIGR_CMR|CPS_1619 [details] [associations]
symbol:CPS_1619 "DNA-binding response regulator"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR009061
InterPro:IPR010093 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0000166 GO:GO:0035556 GO:GO:0003677
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745 SUPFAM:SSF46955
TIGRFAMs:TIGR01764 ProtClustDB:CLSK741041 RefSeq:YP_268357.1
ProteinModelPortal:Q485A8 STRING:Q485A8 GeneID:3520728
KEGG:cps:CPS_1619 PATRIC:21466431 HOGENOM:HOG000133916 OMA:DEYEIAM
BioCyc:CPSY167879:GI48-1696-MONOMER Uniprot:Q485A8
Length = 185
Score = 101 (40.6 bits), Expect = 0.00076, P = 0.00076
Identities = 18/66 (27%), Positives = 38/66 (57%)
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
I+ ++I D MP + G+ + + I+ + + K+ P++ MS + I + + GA F +
Sbjct: 108 IKPSIIFLDLVMPDIDGFAVCKHIRSNEASKNTPIIAMSGLSQQENIEKVIASGANTFLM 167
Query: 122 KPVQLA 127
KP++L+
Sbjct: 168 KPIRLS 173
>TIGR_CMR|BA_2212 [details] [associations]
symbol:BA_2212 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034815 HSSP:Q9WYN0
RefSeq:NP_844604.1 RefSeq:YP_018854.1 RefSeq:YP_028319.1
ProteinModelPortal:Q81R46 DNASU:1085543
EnsemblBacteria:EBBACT00000012844 EnsemblBacteria:EBBACT00000018535
EnsemblBacteria:EBBACT00000022147 GeneID:1085543 GeneID:2815122
GeneID:2848498 KEGG:ban:BA_2212 KEGG:bar:GBAA_2212 KEGG:bat:BAS2056
OMA:IRATESK ProtClustDB:CLSK918052
BioCyc:BANT260799:GJAJ-2124-MONOMER
BioCyc:BANT261594:GJ7F-2201-MONOMER Uniprot:Q81R46
Length = 227
Score = 103 (41.3 bits), Expect = 0.00077, P = 0.00077
Identities = 27/120 (22%), Positives = 67/120 (55%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+D ++++ L+ Y+ +G +A+E G N D LI+ D
Sbjct: 5 ILIVEDEEKIARVVQLELEFEGYESEIAKTGTEAMEKFGNGNWD-----------LILLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPVQLADV 129
+P ++G ++LR+I+ ++ IP++++++ +++ +++ L++GA ++ KP Q+ ++
Sbjct: 54 VMLPNISGLEVLRRIRLKNAV--IPIILLTARDSVVDKVSG-LDQGASDYITKPFQIEEL 110
>UNIPROTKB|Q9KT84 [details] [associations]
symbol:luxO "Regulatory protein LuxO" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0035556 "intracellular signal
transduction" evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PROSITE:PS50045
PROSITE:PS50110 SMART:SM00382 SMART:SM00448 GO:GO:0005524
GO:GO:0003677 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0017111 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG2204 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 PIR:C82250
RefSeq:NP_230666.1 ProteinModelPortal:Q9KT84 DNASU:2614291
GeneID:2614291 KEGG:vch:VC1021 PATRIC:20081144 KO:K10912
OMA:HEEGREF ProtClustDB:CLSK874182 Uniprot:Q9KT84
Length = 455
Score = 107 (42.7 bits), Expect = 0.00085, P = 0.00085
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 14 VDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCM 73
V+D+ L L + V +G A+E +G D LI+ D +
Sbjct: 2 VEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPD-----------LILLDLRL 50
Query: 74 PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
P MTG D+L +KE + D+P+V M++ + GA++F +KP + AD
Sbjct: 51 PDMTGMDVLYAVKEKSP--DVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCE-AD 102
>TIGR_CMR|VC_1021 [details] [associations]
symbol:VC_1021 "LuxO repressor protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PROSITE:PS50045
PROSITE:PS50110 SMART:SM00382 SMART:SM00448 GO:GO:0005524
GO:GO:0003677 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0017111 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG2204 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 PIR:C82250
RefSeq:NP_230666.1 ProteinModelPortal:Q9KT84 DNASU:2614291
GeneID:2614291 KEGG:vch:VC1021 PATRIC:20081144 KO:K10912
OMA:HEEGREF ProtClustDB:CLSK874182 Uniprot:Q9KT84
Length = 455
Score = 107 (42.7 bits), Expect = 0.00085, P = 0.00085
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 14 VDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCM 73
V+D+ L L + V +G A+E +G D LI+ D +
Sbjct: 2 VEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPD-----------LILLDLRL 50
Query: 74 PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
P MTG D+L +KE + D+P+V M++ + GA++F +KP + AD
Sbjct: 51 PDMTGMDVLYAVKEKSP--DVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCE-AD 102
>TIGR_CMR|GSU_2214 [details] [associations]
symbol:GSU_2214 "protein-glutamate methylesterase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006935
"chemotaxis" evidence=ISS] [GO:0008984 "protein-glutamate
methylesterase activity" evidence=ISS] HAMAP:MF_00099
InterPro:IPR000673 InterPro:IPR001789 InterPro:IPR008248
Pfam:PF00072 Pfam:PF01339 PIRSF:PIRSF000876 PROSITE:PS50110
PROSITE:PS50122 SMART:SM00448 GO:GO:0005737 GO:GO:0006355
GO:GO:0035556 GO:GO:0006935 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2201
HOGENOM:HOG000151424 KO:K03412 GO:GO:0008984 Gene3D:3.40.50.180
SUPFAM:SSF52738 RefSeq:NP_953263.1 ProteinModelPortal:P62640
GeneID:2687095 KEGG:gsu:GSU2214 PATRIC:22027283 OMA:SQHMPAG
ProtClustDB:CLSK828757 BioCyc:GSUL243231:GH27-2152-MONOMER
Uniprot:P62640
Length = 371
Score = 106 (42.4 bits), Expect = 0.00085, P = 0.00085
Identities = 32/120 (26%), Positives = 60/120 (50%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV--N 65
+ V+ +DDS R+ I ++L++ +E +G + E+ ++I + +
Sbjct: 3 KIRVVVIDDSAYSRRAITKMLESMP-----------EVEVIGYATDGEEGIRKIIDLKPD 51
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
L+ D MP M G+ LLR + E + V+++SS + ++ R LE GA +F KP +
Sbjct: 52 LVTLDLEMPRMDGFTLLRIVMEYSPTA---VIVISSRSEDEKVFRALELGAVDFVAKPTK 108
>UNIPROTKB|Q4K714 [details] [associations]
symbol:PFL_4888 "Sigma-54 dependent DNA-binding response
regulator" species:220664 "Pseudomonas protegens Pf-5" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0035556
"intracellular signal transduction" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002078 InterPro:IPR002197
InterPro:IPR003593 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00158
Pfam:PF02954 PRINTS:PR01590 PROSITE:PS50045 PROSITE:PS50110
SMART:SM00382 SMART:SM00448 GO:GO:0005524 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG2204
HOGENOM:HOG000058489 InterPro:IPR025662 InterPro:IPR025943
InterPro:IPR025944 PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688
KO:K02481 RefSeq:YP_261969.1 ProteinModelPortal:Q4K714
STRING:Q4K714 GeneID:3479299 KEGG:pfl:PFL_4888 PATRIC:19879244
OMA:CVERATI ProtClustDB:CLSK937927
BioCyc:PFLU220664:GIX8-4929-MONOMER Uniprot:Q4K714
Length = 465
Score = 107 (42.7 bits), Expect = 0.00087, P = 0.00087
Identities = 33/121 (27%), Positives = 60/121 (49%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
++L VDD L+ L + QV +G AL+ L E E ++L+I+
Sbjct: 4 NLLVVDDEPKLCDLLSSALSQNGIQVFTAGNGLHALKVL----EQED-------IDLVIS 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D+ MPGM G LL +IK+ +PV++M++ + + + GA ++ KP + ++
Sbjct: 53 DWRMPGMDGPQLLGEIKQR--YPQLPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDEL 110
Query: 130 N 130
+
Sbjct: 111 D 111
>TIGR_CMR|CPS_1426 [details] [associations]
symbol:CPS_1426 "transcriptional regulatory protein RstA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486
PROSITE:PS50110 SMART:SM00448 SMART:SM00862 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 SUPFAM:SSF46894 RefSeq:YP_268169.1
ProteinModelPortal:Q485U6 STRING:Q485U6 GeneID:3518469
KEGG:cps:CPS_1426 PATRIC:21466063 ProtClustDB:CLSK749833
BioCyc:CPSY167879:GI48-1507-MONOMER Uniprot:Q485U6
Length = 248
Score = 103 (41.3 bits), Expect = 0.00096, P = 0.00096
Identities = 32/125 (25%), Positives = 63/125 (50%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
M ++ H+L V+D I + I L ++VT G+ A++ + LN D
Sbjct: 1 MTAQARPHILLVEDDIDLAEWIADYLIGREFKVTTCHRGDDAVDLIQSLNPD-------- 52
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSS--ENIPSRINRCLEEGAEEFF 120
+++ D +PGM G D+ + ++ + D P++++++ E I + LE GA+++
Sbjct: 53 ---IVLLDGMLPGMDGLDVCKTVRATF---DNPIIMITARDEEIDEVLG--LEMGADDYI 104
Query: 121 LKPVQ 125
KPV+
Sbjct: 105 TKPVR 109
>TAIR|locus:2084968 [details] [associations]
symbol:EIN4 "ETHYLENE INSENSITIVE 4" species:3702
"Arabidopsis thaliana" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=IEA] [GO:0000156 "phosphorelay response
regulator activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0004673 "protein histidine
kinase activity" evidence=IEA;ISS] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=TAS] [GO:0051740 "ethylene binding" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0010105 "negative regulation of ethylene mediated signaling
pathway" evidence=TAS] InterPro:IPR003018 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR009082
InterPro:IPR014525 Pfam:PF00072 Pfam:PF00512 Pfam:PF01590
PIRSF:PIRSF026389 PROSITE:PS50110 SMART:SM00065 SMART:SM00388
SMART:SM00448 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 GO:GO:0006355
GO:GO:0005789 GO:GO:0046872 GO:GO:0004674 GO:GO:0004872
GO:GO:0023014 eggNOG:COG2202 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0010105 EMBL:AC011437
EMBL:AF048982 IPI:IPI00520406 RefSeq:NP_187108.1 RefSeq:NP_974218.1
UniGene:At.21286 HSSP:P49333 ProteinModelPortal:Q9ZTP3 SMR:Q9ZTP3
IntAct:Q9ZTP3 STRING:Q9ZTP3 PaxDb:Q9ZTP3 PRIDE:Q9ZTP3
EnsemblPlants:AT3G04580.1 EnsemblPlants:AT3G04580.2 GeneID:819614
KEGG:ath:AT3G04580 TAIR:At3g04580 HOGENOM:HOG000240343
InParanoid:Q9ZTP3 KO:K14509 OMA:VAISHAS PhylomeDB:Q9ZTP3
ProtClustDB:CLSN2684285 Genevestigator:Q9ZTP3 GO:GO:0051740
Uniprot:Q9ZTP3
Length = 766
Score = 109 (43.4 bits), Expect = 0.00096, P = 0.00096
Identities = 34/117 (29%), Positives = 56/117 (47%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+ DD ++R + +RLL+ +VTAV SG E L L+ E + ++I D
Sbjct: 644 ITLADDDDVNRTVTKRLLEKLGCEVTAVSSG---FECLNALSNVEMS------YRVVILD 694
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRIN-RCLEEGAEEFFLKPVQL 126
MP M G+++ KI++ P++I + + + RCL+ G KPV L
Sbjct: 695 LQMPEMDGFEVAMKIRKFCG-HHWPLIIALTASTEDHVRERCLQMGMNGMIQKPVLL 750
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.136 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 187 173 0.00097 108 3 11 22 0.43 32
31 0.48 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 214
No. of states in DFA: 538 (57 KB)
Total size of DFA: 123 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.75u 0.22s 15.97t Elapsed: 00:00:01
Total cpu time: 15.77u 0.22s 15.99t Elapsed: 00:00:01
Start: Sat May 11 00:25:27 2013 End: Sat May 11 00:25:28 2013
WARNINGS ISSUED: 1