BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046192
(187 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255544001|ref|XP_002513063.1| Two-component response regulator ARR8, putative [Ricinus communis]
gi|223548074|gb|EEF49566.1| Two-component response regulator ARR8, putative [Ricinus communis]
Length = 197
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/202 (69%), Positives = 154/202 (76%), Gaps = 29/202 (14%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGL---------- 50
MGM DSQFHVLAVDDS+IDRKLIERLLKTSS+ VTAVDSG+KALEFLGL
Sbjct: 1 MGMAADSQFHVLAVDDSLIDRKLIERLLKTSSFHVTAVDSGSKALEFLGLNEEEEEEEEE 60
Query: 51 -----------LNEDEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIM 99
+DE Q +QVNLIITDYCMPGMTGYDLLRKIKES S KDIPVVIM
Sbjct: 61 EERRDSSPISVCPDDEH--HQDLQVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIM 118
Query: 100 SSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEE 159
SSEN+PSRINRCLEEGAEEFFLKPVQL+DVNKLKPH+MKG ++E N NNKRKG+EE
Sbjct: 119 SSENVPSRINRCLEEGAEEFFLKPVQLSDVNKLKPHMMKGKTRE----NEPNNKRKGMEE 174
Query: 160 IDSADRTRTRLNDTIDINNDGL 181
I S +RTRTR + NN+GL
Sbjct: 175 IHSPERTRTRY--YANNNNNGL 194
>gi|224075846|ref|XP_002304794.1| type-a response regulator [Populus trichocarpa]
gi|224075848|ref|XP_002304795.1| hypothetical protein POPTRDRAFT_693167 [Populus trichocarpa]
gi|222842226|gb|EEE79773.1| type-a response regulator [Populus trichocarpa]
gi|222842227|gb|EEE79774.1| hypothetical protein POPTRDRAFT_693167 [Populus trichocarpa]
Length = 193
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/186 (70%), Positives = 155/186 (83%), Gaps = 15/186 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS--- 59
+ T++QFHVLAVDDS+IDRKLIERLLKTSSYQVTAVDSG+KALEFLGL +DEQ +S
Sbjct: 7 LATETQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLSGDDEQRDSNPS 66
Query: 60 --------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRC 111
Q I++N+IITDYCMPGMTGYDLL+KIKES KDIPVVIMSSEN+PSRINRC
Sbjct: 67 SVSPDHHHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRC 126
Query: 112 LEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEI-DSADRTRTRL 170
LEEGAEEFFLKPVQL+DVNKL+PHLMKG KE +P NNKRKG+EEI +S RTR+R
Sbjct: 127 LEEGAEEFFLKPVQLSDVNKLRPHLMKGRCKEEDQP---NNKRKGMEEIVNSPGRTRSRY 183
Query: 171 NDTIDI 176
++ +++
Sbjct: 184 SEGLEV 189
>gi|309951232|emb|CBX43986.1| putative A-type response regulator 4 [Populus x canadensis]
Length = 193
Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/185 (71%), Positives = 154/185 (83%), Gaps = 15/185 (8%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS---- 59
T++QFHVLAVDDS+IDRKLIERLLKTSSYQVTAVDSG+KALEFLGL +DEQ +S
Sbjct: 8 ATETQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLHGDDEQRDSNPSS 67
Query: 60 -------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL 112
Q I++N+IITDYCMPGMTGYDLL+KIKES KDIPVVIMSSEN+PSRINRCL
Sbjct: 68 VSPDHHHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCL 127
Query: 113 EEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEI-DSADRTRTRLN 171
EEGAEEFFLKPVQL+DVNKL+PHLMKG KE +P +NKRKG+EEI +S RTR+R N
Sbjct: 128 EEGAEEFFLKPVQLSDVNKLRPHLMKGRCKEEDQP---SNKRKGMEEIVNSPGRTRSRYN 184
Query: 172 DTIDI 176
+ +++
Sbjct: 185 EGLEV 189
>gi|309951234|emb|CBX43987.1| putative A-type response regulator 5 [Populus x canadensis]
Length = 198
Score = 258 bits (660), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 155/187 (82%), Gaps = 13/187 (6%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS--- 59
M T++QFHVLAVDD +IDRKLIERLLKTSSYQVTAVDSG+KALEFLGL E+E +S
Sbjct: 11 MATETQFHVLAVDDCLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLNGENELRDSEPA 70
Query: 60 --------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRC 111
Q I++N+IITDYCMPGMTGYDLL+KIKES KDIPVVIMSSEN+PSRINRC
Sbjct: 71 SVSPDPYHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRC 130
Query: 112 LEEGAEEFFLKPVQLADVNKLKPHLMKGISK-EIKEPNNINNKRKGLEEI-DSADRTRTR 169
L+EGAEEFFLKPVQL+DVNKL+PHLMKG K E +E + NNKRKG+EEI +S DRTRTR
Sbjct: 131 LKEGAEEFFLKPVQLSDVNKLRPHLMKGRCKEEEEEEDQPNNKRKGMEEIVNSPDRTRTR 190
Query: 170 LNDTIDI 176
ND +++
Sbjct: 191 YNDGLEV 197
>gi|224053258|ref|XP_002297741.1| type-a response regulator [Populus trichocarpa]
gi|222844999|gb|EEE82546.1| type-a response regulator [Populus trichocarpa]
Length = 203
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/192 (69%), Positives = 155/192 (80%), Gaps = 18/192 (9%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS--- 59
M T++QFHVLAVDD +IDRKLIERLLKTSSYQVTAVDSG+KALEFLGL E+E +S
Sbjct: 11 MATETQFHVLAVDDCLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLNGENELRDSKPA 70
Query: 60 --------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRC 111
Q I++N+IITDYCMPGMTGYDLL+KIKES KDIPVVIMSSEN+PSRINRC
Sbjct: 71 SVSPDPYHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRC 130
Query: 112 LEEGAEEFFLKPVQLADVNKLKPHLMKGISK------EIKEPNNINNKRKGLEEI-DSAD 164
L+EGAEEFFLKPVQL+DVNKL+PHLMKG K E +E + NNKRKG+EEI +S D
Sbjct: 131 LKEGAEEFFLKPVQLSDVNKLRPHLMKGRCKEEEEEEEEEEEDQPNNKRKGMEEIVNSPD 190
Query: 165 RTRTRLNDTIDI 176
RTRTR ND +++
Sbjct: 191 RTRTRYNDGLEV 202
>gi|388506210|gb|AFK41171.1| unknown [Lotus japonicus]
Length = 174
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/171 (73%), Positives = 141/171 (82%), Gaps = 2/171 (1%)
Query: 1 MGMVT--DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTN 58
MGM T ++QFHVLAVDDS+IDR LIERLLKTSS+ VTAVDS +KAL FLGL+ +
Sbjct: 1 MGMATPKETQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSASKALNFLGLVEDMASEI 60
Query: 59 SQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEE 118
Q + VNLIITDYCMPGMTGYDLLRKIKES SLKDIPVVIMSSEN+PSRINRCLEEGAEE
Sbjct: 61 HQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEE 120
Query: 119 FFLKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTR 169
FFLKPVQL+DV+KLKPHLMK KE ++ INNKRK EE S D+TR +
Sbjct: 121 FFLKPVQLSDVHKLKPHLMKSRVKEEQDRQPINNKRKIKEEFHSPDKTRVK 171
>gi|225465885|ref|XP_002267404.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 220
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/216 (63%), Positives = 152/216 (70%), Gaps = 46/216 (21%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTN-- 58
MGM T++QFHVLAVDDSIIDRKLIE+LLKTSSYQVTAVDSG+KALEFLGL E EQ N
Sbjct: 1 MGMATEAQFHVLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGL-QEAEQRNLS 59
Query: 59 ------SQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL 112
SQ ++VNLIITDYCMPGMTGYDLLRKIKES SLKDIPVVIMSSENIPSRINRCL
Sbjct: 60 PPSLCPSQEMEVNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCL 119
Query: 113 EEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNI---------------------- 150
EEGAE+FFLKPVQL+DVNKL+PHL+KG ++E +E
Sbjct: 120 EEGAEDFFLKPVQLSDVNKLRPHLLKGKAREEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 179
Query: 151 ---------------NNKRKGLEEIDSADRTRTRLN 171
+NKRK +EE S DRTR R N
Sbjct: 180 EEEEEEEEEEEEELSSNKRKNVEESLSHDRTRARFN 215
>gi|356555024|ref|XP_003545839.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 179
Score = 244 bits (624), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 123/179 (68%), Positives = 143/179 (79%), Gaps = 9/179 (5%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTN-- 58
M M ++QFHVLAVDDSIIDR LIERLLKTSS+ VT VDS KAL+FLGL+ ++ +T
Sbjct: 1 MAMTVEAQFHVLAVDDSIIDRMLIERLLKTSSFHVTTVDSATKALKFLGLVEDELRTFDT 60
Query: 59 ------SQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL 112
Q + +NLIITDYCMPGMTGYDLLRKIKES SLK+IPVVIMSSEN+PSRINRCL
Sbjct: 61 TVASEIHQDVDINLIITDYCMPGMTGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCL 120
Query: 113 EEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLN 171
EEGAEEFFLKPVQ ADVNKLKPHLMK +KE ++ NNKRK +EEI S ++TR + +
Sbjct: 121 EEGAEEFFLKPVQQADVNKLKPHLMKSRAKE-EQDQPFNNKRKDMEEIHSPNKTRIKCS 178
>gi|357515051|ref|XP_003627814.1| Two-component response regulator ARR8 [Medicago truncatula]
gi|92885116|gb|ABE87636.1| Response regulator receiver [Medicago truncatula]
gi|355521836|gb|AET02290.1| Two-component response regulator ARR8 [Medicago truncatula]
gi|388516389|gb|AFK46256.1| unknown [Medicago truncatula]
Length = 177
Score = 244 bits (624), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 123/179 (68%), Positives = 145/179 (81%), Gaps = 11/179 (6%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTN-- 58
MGM ++QFHVLAVDDSIIDR LIERLLKTSS+ VT VDS +KAL+FLGL+ ++ +T
Sbjct: 1 MGMAAENQFHVLAVDDSIIDRMLIERLLKTSSFNVTTVDSASKALKFLGLVEDEMRTYDT 60
Query: 59 ------SQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL 112
+Q + VNLIITDYCMPGMTGYDLLRKIKES S KDIPVVIMSSEN+PSRINRCL
Sbjct: 61 HVASEINQDVDVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRINRCL 120
Query: 113 EEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLN 171
EEGAEEFFLKPVQL+DV+KLKPHL+K ++KE N KRKG+EE S D+TR +++
Sbjct: 121 EEGAEEFFLKPVQLSDVSKLKPHLLKS---KVKEENEQPIKRKGMEETQSPDKTRPKVS 176
>gi|296090338|emb|CBI40157.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/147 (82%), Positives = 132/147 (89%), Gaps = 9/147 (6%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTN-- 58
MGM T++QFHVLAVDDSIIDRKLIE+LLKTSSYQVTAVDSG+KALEFLGL E EQ N
Sbjct: 1 MGMATEAQFHVLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGL-QEAEQRNLS 59
Query: 59 ------SQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL 112
SQ ++VNLIITDYCMPGMTGYDLLRKIKES SLKDIPVVIMSSENIPSRINRCL
Sbjct: 60 PPSLCPSQEMEVNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCL 119
Query: 113 EEGAEEFFLKPVQLADVNKLKPHLMKG 139
EEGAE+FFLKPVQL+DVNKL+PHL+KG
Sbjct: 120 EEGAEDFFLKPVQLSDVNKLRPHLLKG 146
>gi|356546360|ref|XP_003541594.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 179
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 143/179 (79%), Gaps = 9/179 (5%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTN-- 58
M M ++QFHVLAVDDSIIDR LIERLLKTSS+ VT +DS KAL+FLGL+ ++ +T
Sbjct: 1 MAMTVEAQFHVLAVDDSIIDRMLIERLLKTSSFHVTTLDSATKALKFLGLVEDELRTFDT 60
Query: 59 ------SQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL 112
Q + VNLIITDYCMPG+TGYDLLRKIKES SLK+IPVVIMSSEN+PSRINRCL
Sbjct: 61 TVASEIHQDVDVNLIITDYCMPGLTGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCL 120
Query: 113 EEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLN 171
EEGAEEFFLKPVQ ADVNKLKPHLMK +KE ++ NNKRK ++EI S ++TR + +
Sbjct: 121 EEGAEEFFLKPVQQADVNKLKPHLMKSRAKE-EQDQPFNNKRKDMKEIHSPNKTRIKCS 178
>gi|225441254|ref|XP_002273990.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 218
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 148/213 (69%), Gaps = 42/213 (19%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS- 59
MGM T+SQFHVLAVDDS+IDRKLIE+LLK SSYQVT VDSG+KALEFLGL D T S
Sbjct: 1 MGMSTESQFHVLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFLGLHENDPNTPSV 60
Query: 60 -----QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE 114
Q ++VNLIITDYCMPGMTGYDLL+KIKES+SL++IPVVIMSSEN+PSRI RCLEE
Sbjct: 61 SPNSHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEE 120
Query: 115 GAEEFFLKPVQLADVNKLKPHLMKGISKE--------------------IKEPNNI---- 150
GAEEFFLKPVQ++DVN+LKPH+MK SK+ EP +
Sbjct: 121 GAEEFFLKPVQISDVNRLKPHMMKAKSKDQQQENEEKQEKQEEESKETEKSEPESQQPQQ 180
Query: 151 ------------NNKRKGLEEIDSADRTRTRLN 171
NNKRK +EE S DRTR R +
Sbjct: 181 QQQQQQQQQQSNNNKRKAIEEGLSPDRTRPRYS 213
>gi|388497694|gb|AFK36913.1| unknown [Medicago truncatula]
Length = 239
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/147 (76%), Positives = 127/147 (86%), Gaps = 9/147 (6%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT--- 57
MGM +SQFHVLAVDDSIIDRKLIERLLKTSSYQVT VDSG+KALEFLGL DE
Sbjct: 1 MGMAAESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNT 60
Query: 58 ------NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRC 111
N Q ++VNL+ITDYCMPGMTGYDLL+KIKES+SL++IPVVIMSSEN+PSRINRC
Sbjct: 61 PSVFPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRC 120
Query: 112 LEEGAEEFFLKPVQLADVNKLKPHLMK 138
LEEGAEEFFLKPV+L+D+N+LKPH+ K
Sbjct: 121 LEEGAEEFFLKPVRLSDLNRLKPHMKK 147
>gi|370988687|dbj|BAL43557.1| type-A response regulator [Petunia x hybrida]
Length = 227
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/223 (58%), Positives = 148/223 (66%), Gaps = 53/223 (23%)
Query: 1 MGMVT-DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT-- 57
MGM +SQFHVLAVDDS+IDRKLIERLLKTSS QVT VDSG+KALEFLGL E EQ
Sbjct: 1 MGMAAAESQFHVLAVDDSLIDRKLIERLLKTSSCQVTTVDSGSKALEFLGL-QEHEQNKS 59
Query: 58 --------NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRIN 109
N Q ++NLIITDYCMPGMTGYDLL+KIKES+SL++IPVVIMSSEN+PSRIN
Sbjct: 60 NQPCVSLDNHQEAEINLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRIN 119
Query: 110 RCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKE--------------------PNN 149
RCLEEGAEEFFLKPV+L+DVNKL+PH+MK K +E P+
Sbjct: 120 RCLEEGAEEFFLKPVRLSDVNKLRPHMMKSKCKTHQEEVAEKIVTVEKQESIEIAHVPSQ 179
Query: 150 I---------------------NNKRKGLEEIDSADRTRTRLN 171
I +NKRK +EE S DRTR R N
Sbjct: 180 IPQTQAQTESDAVQQQQKSQANSNKRKAMEENLSPDRTRPRYN 222
>gi|224086847|ref|XP_002307983.1| type-a response regulator [Populus trichocarpa]
gi|222853959|gb|EEE91506.1| type-a response regulator [Populus trichocarpa]
Length = 233
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/223 (56%), Positives = 147/223 (65%), Gaps = 58/223 (26%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI-- 62
+ SQFHVLAVDDS+IDRKLIERLLKTSSYQVTAVDSG+KAL+FLGL ED+ +N +
Sbjct: 7 SHSQFHVLAVDDSMIDRKLIERLLKTSSYQVTAVDSGSKALKFLGLHEEDDHSNPDTVPS 66
Query: 63 ---------QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLE 113
+VNLIITDYCMPGMTGYDLL+K+KES+SL+DIPVVIMSSEN+PSRI RCLE
Sbjct: 67 VSPNDHREVEVNLIITDYCMPGMTGYDLLKKVKESSSLRDIPVVIMSSENVPSRITRCLE 126
Query: 114 EGAEEFFLKPVQLADVNKLKPHLMKGISKE------------------------------ 143
EGAEEFFLKPV+LAD+N+LKPH+MK K
Sbjct: 127 EGAEEFFLKPVRLADLNRLKPHMMKTKIKNEKQEDQEKLENSEIQSEQQPQPPSQPQPQP 186
Query: 144 ---------------IKEPNNINNKRKGLEEIDSADRTRTRLN 171
+++PN NNKRK +EE S DRTR R N
Sbjct: 187 QPQLESQSQPQPSPLLQQPN--NNKRKAMEEGLSPDRTRPRYN 227
>gi|449437731|ref|XP_004136644.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 226
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/158 (72%), Positives = 129/158 (81%), Gaps = 15/158 (9%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT--- 57
M M DSQFHVLAVDDS+IDRKLIERLLKTSSYQVT VDSG+KALEFLGL+ E + T
Sbjct: 1 MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIQEHQPTNFK 60
Query: 58 ------------NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIP 105
+ Q ++VNLIITDYCMPGMTG+DLL+K+KES SL++IPVVIMSSEN+P
Sbjct: 61 SSSNSSFSSPNNHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENVP 120
Query: 106 SRINRCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKE 143
SRINRCLEEGAEEFFLKPV+L DVNKLKPH+MK KE
Sbjct: 121 SRINRCLEEGAEEFFLKPVRLCDVNKLKPHMMKTKVKE 158
>gi|225465891|ref|XP_002267932.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 146
Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 114/139 (82%), Positives = 128/139 (92%), Gaps = 3/139 (2%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS- 59
MG+ ++QFHVLAVDDS+IDRKLIE+LLKTSS+QVTAVDSG+KALEFLGL E+EQ N
Sbjct: 1 MGIAAETQFHVLAVDDSLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGL-QEEEQRNHH 59
Query: 60 -QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEE 118
Q +VNLIITDY MPGMTGYDLLRKIKES+SLKDIPVVIMSSENIPSRINRCLEEGAE+
Sbjct: 60 PQETEVNLIITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAED 119
Query: 119 FFLKPVQLADVNKLKPHLM 137
FFLKPVQL+DVNKL+PHL+
Sbjct: 120 FFLKPVQLSDVNKLRPHLL 138
>gi|225465893|ref|XP_002268352.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
gi|296090344|emb|CBI40163.3| unnamed protein product [Vitis vinifera]
Length = 197
Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 122/163 (74%), Positives = 140/163 (85%), Gaps = 6/163 (3%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS- 59
M M ++QFHVLAVDD++IDRKLIE+LLKTSS+QVTAVDSG+KALEFLGL E+EQ N
Sbjct: 1 MDMAIEAQFHVLAVDDNLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGL-QEEEQRNHH 59
Query: 60 -QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEE 118
Q ++VNLIITDY MPGMTGYDLLRKIKES+SLKDIPVVIMSSENIPSRINRCLEEGAE+
Sbjct: 60 PQEMEVNLIITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAED 119
Query: 119 FFLKPVQLADVNKLKPHLM--KGISKEIKEPNNINNKRKGLEE 159
FFLKPVQL+DV+KL+PHL+ K +E K NI KRK +EE
Sbjct: 120 FFLKPVQLSDVSKLRPHLLRRKAEEEEEKPKRNI-RKRKTIEE 161
>gi|297739924|emb|CBI30106.3| unnamed protein product [Vitis vinifera]
Length = 157
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/143 (77%), Positives = 126/143 (88%), Gaps = 6/143 (4%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS- 59
MGM T+SQFHVLAVDDS+IDRKLIE+LLK SSYQVT VDSG+KALEFLGL D T S
Sbjct: 1 MGMSTESQFHVLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFLGLHENDPNTPSV 60
Query: 60 -----QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE 114
Q ++VNLIITDYCMPGMTGYDLL+KIKES+SL++IPVVIMSSEN+PSRI RCLEE
Sbjct: 61 SPNSHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEE 120
Query: 115 GAEEFFLKPVQLADVNKLKPHLM 137
GAEEFFLKPVQ++DVN+LKPH+M
Sbjct: 121 GAEEFFLKPVQISDVNRLKPHMM 143
>gi|309951238|emb|CBX43989.1| putative A-type response regulator 7 [Populus x canadensis]
Length = 227
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 148/216 (68%), Gaps = 54/216 (25%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTN-------- 58
SQFHVLAVDDS+IDRKLIERLLKTSSYQVT VDSG+KAL+FLGL EDEQ+N
Sbjct: 9 SQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGL-QEDEQSNPDTPFVSP 67
Query: 59 --SQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGA 116
Q ++VNLIITDYCMPGMTGYDLL+K+KES+SL++IPVVIMSSEN+PSRI RCLEEGA
Sbjct: 68 NNHQEVEVNLIITDYCMPGMTGYDLLKKVKESSSLRNIPVVIMSSENVPSRITRCLEEGA 127
Query: 117 EEFFLKPVQLADVNKLKPHLMKG------------------ISKEIK------------- 145
EEFFLKPV+L+D+N+LKPH+MK S+E K
Sbjct: 128 EEFFLKPVRLSDLNRLKPHMMKTKIKNQKQEEQEELEMPTIQSEEQKQPVQQPSSQPQPE 187
Query: 146 ----------EPNNINNKRKGLEEIDSADRTRTRLN 171
+PN NNKRK +EE S DRTR R N
Sbjct: 188 SQPQPSALLLQPN--NNKRKAMEEGLSPDRTRPRYN 221
>gi|309951236|emb|CBX43988.1| putative A-type response regulator 6 [Populus x canadensis]
Length = 230
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/145 (75%), Positives = 127/145 (87%), Gaps = 11/145 (7%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI-- 62
+ SQFHVLAVDDS+IDRKLIERLLKTSSYQVTAVDSG+KAL+FLGL ED+Q+N +
Sbjct: 7 SHSQFHVLAVDDSMIDRKLIERLLKTSSYQVTAVDSGSKALKFLGLHEEDDQSNPDTVPS 66
Query: 63 ---------QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLE 113
+VNLIITDYCMPGMTGYDLL+K+KES+SL+DIPVVIMSSEN+PSRI RCLE
Sbjct: 67 VCPNDHREVEVNLIITDYCMPGMTGYDLLKKVKESSSLRDIPVVIMSSENVPSRITRCLE 126
Query: 114 EGAEEFFLKPVQLADVNKLKPHLMK 138
EGAEEFFLKPV+LAD+N+LKPH+MK
Sbjct: 127 EGAEEFFLKPVRLADLNRLKPHMMK 151
>gi|255583668|ref|XP_002532588.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223527676|gb|EEF29785.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 221
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 146/216 (67%), Gaps = 44/216 (20%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT--- 57
M + T+S+FHVLAVDDS+IDRKLIE+LLK SSYQVT VDSG+KAL+FLGL +D +
Sbjct: 1 MSVATESKFHVLAVDDSLIDRKLIEKLLKISSYQVTTVDSGSKALQFLGLHEDDRSSPEI 60
Query: 58 ------NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRC 111
+ Q ++VNLIITDYCMPGMTGYDLL+KIKES+SLK+IPVVIMSSEN+P+RI RC
Sbjct: 61 PSVSPNSHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLKNIPVVIMSSENVPARITRC 120
Query: 112 LEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNINN------------------- 152
LEEGAEEFFLKPVQL+D+N+L+PH+MK SK K+ N
Sbjct: 121 LEEGAEEFFLKPVQLSDLNRLRPHMMKTKSKNDKQEKQENQQVLEESEVQSQLQSSQTQH 180
Query: 153 ----------------KRKGLEEIDSADRTRTRLND 172
KRK +EE S +RTR R ND
Sbjct: 181 LLSPPPPPQQPLNNNNKRKSMEEGLSPERTRPRYND 216
>gi|224137712|ref|XP_002322625.1| type-a response regulator [Populus trichocarpa]
gi|222867255|gb|EEF04386.1| type-a response regulator [Populus trichocarpa]
Length = 227
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 147/216 (68%), Gaps = 54/216 (25%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTN-------- 58
SQFHVLAVDDS+IDRKLIERLLKTSSYQVT VDSG+KAL+FLGL EDEQ+N
Sbjct: 9 SQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGL-QEDEQSNPDTPYVSP 67
Query: 59 --SQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGA 116
Q ++VNLIITDYCMPGMTGYDLL+K+KES+SL++IPVVIMSSEN+PSRI RCLEEGA
Sbjct: 68 NNHQEMEVNLIITDYCMPGMTGYDLLKKVKESSSLRNIPVVIMSSENVPSRITRCLEEGA 127
Query: 117 EEFFLKPVQLADVNKLKPHLMK-----------------GISKE---------------- 143
EEFFLKPV+L+D+N+LKPH+MK I E
Sbjct: 128 EEFFLKPVRLSDLNRLKPHMMKTKIKNQKQEEQEELEIPAIQSEEQKQPVQQPSSQPQPE 187
Query: 144 --------IKEPNNINNKRKGLEEIDSADRTRTRLN 171
+ +PN NNKRK +EE S DRTR R N
Sbjct: 188 SQPQPSALLLQPN--NNKRKAMEEGLSPDRTRPRYN 221
>gi|109631202|gb|ABG35777.1| SRR217 [Striga asiatica]
Length = 220
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/149 (75%), Positives = 129/149 (86%), Gaps = 11/149 (7%)
Query: 1 MGMVT-DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS 59
MGM ++QFHVLAVDDS+IDRKLIERLLKTSSYQVT VDSGNKALEFLG ++DE NS
Sbjct: 1 MGMAAAEAQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGNKALEFLGW-SKDESGNS 59
Query: 60 ---------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
QV++VNL+ITDYCMPGMTGY+LL+K+KES L+DIPVVIMSSEN+PSRINR
Sbjct: 60 NAFDSPKNHQVVEVNLVITDYCMPGMTGYELLKKVKESTFLRDIPVVIMSSENVPSRINR 119
Query: 111 CLEEGAEEFFLKPVQLADVNKLKPHLMKG 139
CLEEGAEEFFLKPV+L+DVNKL+PH+MK
Sbjct: 120 CLEEGAEEFFLKPVRLSDVNKLRPHMMKA 148
>gi|15230202|ref|NP_191263.1| two-component response regulator ARR9 [Arabidopsis thaliana]
gi|51315815|sp|O80366.1|ARR9_ARATH RecName: Full=Two-component response regulator ARR9; AltName:
Full=Response reactor 4
gi|3273202|dbj|BAA31146.1| responce reactor4 [Arabidopsis thaliana]
gi|6911874|emb|CAB72174.1| responce reactor 4 [Arabidopsis thaliana]
gi|19699061|gb|AAL90898.1| AT3g57040/F24I3_120 [Arabidopsis thaliana]
gi|22137112|gb|AAM91401.1| At3g57040/F24I3_120 [Arabidopsis thaliana]
gi|332646081|gb|AEE79602.1| two-component response regulator ARR9 [Arabidopsis thaliana]
Length = 234
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/228 (53%), Positives = 145/228 (63%), Gaps = 57/228 (25%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ---- 56
MGM +SQFHVLAVDDS+ DRKLIERLL+ SS QVT VDSG+KALEFLGL +
Sbjct: 1 MGMAAESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPN 60
Query: 57 ------TNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
N QV++VNLIITDYCMPGMTGYDLL+K+KES++ +DIPVVIMSSEN+P+RI+R
Sbjct: 61 AFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISR 120
Query: 111 CLEEGAEEFFLKPVQLADVNKLKPHLMK-------------------GISKEIKEPN--- 148
CLEEGAEEFFLKPV+LAD+NKLKPH+MK G+ + +P
Sbjct: 121 CLEEGAEEFFLKPVRLADLNKLKPHMMKTKLKNQKLEEIETTSKVENGVPTAVADPEIKD 180
Query: 149 -------------------------NINNKRKGLEEIDSADRTRTRLN 171
+INNKRK +EE S DR R R +
Sbjct: 181 STNIEIEILPLQQDLLLVQQEEQTLSINNKRKSVEEGISTDRARPRFD 228
>gi|358248966|ref|NP_001240226.1| uncharacterized protein LOC100788079 [Glycine max]
gi|255641691|gb|ACU21117.1| unknown [Glycine max]
Length = 248
Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 114/158 (72%), Positives = 131/158 (82%), Gaps = 12/158 (7%)
Query: 1 MGMVT-DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS 59
MGM +SQFHVLAVDDSIIDRKLIERLL+TSSYQVT VDSG+KALEFLGL DE S
Sbjct: 1 MGMAAAESQFHVLAVDDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLRENDESNPS 60
Query: 60 -----------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI 108
Q ++VNL+ITDYCMPGMTGYDLL+KIKES+SL++IPVVIMSSEN+PSRI
Sbjct: 61 IPSVCPNNHQPQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRI 120
Query: 109 NRCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKE 146
NRCLEEGAEEFFLKPV+L+D+NKLKPH+ K K+ K+
Sbjct: 121 NRCLEEGAEEFFLKPVRLSDLNKLKPHMKKTKFKDQKQ 158
>gi|359807137|ref|NP_001241095.1| uncharacterized protein LOC100814494 [Glycine max]
gi|255647755|gb|ACU24338.1| unknown [Glycine max]
Length = 244
Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 110/153 (71%), Positives = 129/153 (84%), Gaps = 9/153 (5%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT----- 57
M +SQFHVLAVDDS+IDRKLIERLL+TSSY+VT VDSG+KALEFLGL DE
Sbjct: 1 MAAESQFHVLAVDDSLIDRKLIERLLRTSSYEVTTVDSGSKALEFLGLCENDESNPSTPY 60
Query: 58 ----NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLE 113
N Q ++VNL+ITDYCMPGMTGYDLL+KIKES+SL++IPVVIMSSEN+PSRINRCLE
Sbjct: 61 VCPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLE 120
Query: 114 EGAEEFFLKPVQLADVNKLKPHLMKGISKEIKE 146
EGAEEFFLKPV+L+D+NKLKPH+ K K+ K+
Sbjct: 121 EGAEEFFLKPVRLSDLNKLKPHMKKTKLKDQKQ 153
>gi|297824073|ref|XP_002879919.1| hypothetical protein ARALYDRAFT_483202 [Arabidopsis lyrata subsp.
lyrata]
gi|297325758|gb|EFH56178.1| hypothetical protein ARALYDRAFT_483202 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 149/214 (69%), Gaps = 42/214 (19%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS- 59
M M T+S+FHVLAVDDS+ DRK+IERLL+ SS QVT VDSG+KALEFLGL +D N+
Sbjct: 1 MVMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNNPNAL 60
Query: 60 -------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL 112
Q +++NLIITDYCMPGMTGYDLL+K+KESA+L+ IPVVIMSSEN+P+RI+RCL
Sbjct: 61 STSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAALRSIPVVIMSSENVPARISRCL 120
Query: 113 EEGAEEFFLKPVQLADVNKLKPHLMKG----------------ISK-EIK---------- 145
EEGAEEFFLKPV+LAD+ KLKPH+MK +SK EI+
Sbjct: 121 EEGAEEFFLKPVKLADLTKLKPHMMKTKLKNESEKPVAIEEIVVSKPEIEKEEASSVIEI 180
Query: 146 -------EPNNINNKRKGLEEIDSADRTRTRLND 172
EP +NKRK +EE+ S DR+R + ND
Sbjct: 181 LPLHQELEPMLSSNKRKAMEEVISTDRSRPKYND 214
>gi|388492888|gb|AFK34510.1| unknown [Medicago truncatula]
Length = 167
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/159 (74%), Positives = 131/159 (82%), Gaps = 13/159 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS------- 59
+QFHVLAVDDS+IDR LIERLLKTSS+ VT VDSG KAL+FLGL+ EDE N
Sbjct: 2 AQFHVLAVDDSVIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLV-EDEVRNEKPHSIAA 60
Query: 60 ---QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGA 116
QV++VNLIITDYCMPGMTGYDLLRKIKES SLKDIPVVI SSEN+PSRINRCLEEGA
Sbjct: 61 ETDQVVEVNLIITDYCMPGMTGYDLLRKIKESNSLKDIPVVITSSENVPSRINRCLEEGA 120
Query: 117 EEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRK 155
EEFFLKPVQ +DVNKLKPHL+K +K E + INNKR+
Sbjct: 121 EEFFLKPVQQSDVNKLKPHLLK--TKVKNEDDLINNKRR 157
>gi|363807796|ref|NP_001242179.1| uncharacterized protein LOC100818762 [Glycine max]
gi|255633210|gb|ACU16961.1| unknown [Glycine max]
Length = 172
Score = 224 bits (572), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 114/166 (68%), Positives = 136/166 (81%), Gaps = 12/166 (7%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS- 59
MGM ++QF VLAVDDS+IDR LIERLLKTSS+ VTA+DSG+KAL+FLGL+ EDEQ N
Sbjct: 1 MGMAAEAQFQVLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGLV-EDEQRNKE 59
Query: 60 ---------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
Q ++VNLIITDYCMP MTGYDLL+KIKES SLKDIPVVIMSSEN+P+RINR
Sbjct: 60 PPSIALESHQDVEVNLIITDYCMPEMTGYDLLKKIKESKSLKDIPVVIMSSENVPARINR 119
Query: 111 CLEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRKG 156
CLE+GA+EFFLKPVQ +DVNKL+PHL+K K+ +E IN K++G
Sbjct: 120 CLEDGADEFFLKPVQQSDVNKLRPHLLKSKVKD-EEVQQINKKKEG 164
>gi|15227325|ref|NP_181663.1| two-component response regulator ARR8 [Arabidopsis thaliana]
gi|51315814|sp|O80365.1|ARR8_ARATH RecName: Full=Two-component response regulator ARR8; AltName:
Full=Response reactor 3
gi|3273200|dbj|BAA31145.1| responce reactor3 [Arabidopsis thaliana]
gi|3894192|gb|AAC78541.1| putative two-component response regulator 3 protein [Arabidopsis
thaliana]
gi|18491269|gb|AAL69459.1| At2g41310/F13H10.14 [Arabidopsis thaliana]
gi|110736644|dbj|BAF00286.1| putative two-component response regulator 3 protein [Arabidopsis
thaliana]
gi|330254865|gb|AEC09959.1| two-component response regulator ARR8 [Arabidopsis thaliana]
Length = 225
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 144/220 (65%), Gaps = 48/220 (21%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS- 59
M M T+S+FHVLAVDDS+ DRK+IERLL+ SS QVT VDSG+KALEFLGL +D N+
Sbjct: 1 MVMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNAL 60
Query: 60 -------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL 112
Q +++NLIITDYCMPGMTGYDLL+K+KESA+ + IPVVIMSSEN+P+RI+RCL
Sbjct: 61 STSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCL 120
Query: 113 EEGAEEFFLKPVQLADVNKLKPHLMKG--------------------------------- 139
EEGAEEFFLKPV+LAD+ KLKPH+MK
Sbjct: 121 EEGAEEFFLKPVKLADLTKLKPHMMKTKLKKESEKPVAIEEIVVSKPEIEEEEEESSVIE 180
Query: 140 -------ISKEIKEPNNINNKRKGLEEIDSADRTRTRLND 172
I E EP +NKRK +EE+ S DR+R + ND
Sbjct: 181 ILPLHQEIESEQLEPMLSSNKRKAMEEVVSTDRSRPKYND 220
>gi|356541574|ref|XP_003539249.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 187
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/148 (73%), Positives = 124/148 (83%), Gaps = 9/148 (6%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT--- 57
MGM ++QFHVLAVDDS+IDR LIERLLKTSS+ VTAVDSG+KAL+FLGL+ E
Sbjct: 1 MGMAAEAQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALKFLGLVEEKRNEEPP 60
Query: 58 ------NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRC 111
+ Q ++VNLIITDYCMP MTGYDLLRKIKES SLKDIPVVIMSSEN+P+RINRC
Sbjct: 61 PCIALESHQDVEVNLIITDYCMPEMTGYDLLRKIKESKSLKDIPVVIMSSENVPARINRC 120
Query: 112 LEEGAEEFFLKPVQLADVNKLKPHLMKG 139
LEEGA+EFFLKPVQ +DVNKL+PHLMK
Sbjct: 121 LEEGADEFFLKPVQQSDVNKLRPHLMKS 148
>gi|109631210|gb|ABG35781.1| SRR197 [Striga asiatica]
Length = 211
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 124/140 (88%), Gaps = 2/140 (1%)
Query: 1 MGMVT-DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS 59
MGM ++QFHV AVDDS+IDRKLIERLLKTSSYQVT VDSG+KALEFLG + D N
Sbjct: 1 MGMAAAEAQFHVFAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGE-SCDSPKNQ 59
Query: 60 QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEF 119
Q I+VNL+ITDYCMPGMTGYDLL+K+KES+ L+DIPVVI+SSEN+PSRINRCLEEG EEF
Sbjct: 60 QEIEVNLVITDYCMPGMTGYDLLKKMKESSFLRDIPVVILSSENVPSRINRCLEEGTEEF 119
Query: 120 FLKPVQLADVNKLKPHLMKG 139
FLKPV+L+DVNKL+PH+MK
Sbjct: 120 FLKPVRLSDVNKLRPHMMKA 139
>gi|255647513|gb|ACU24220.1| unknown [Glycine max]
Length = 191
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/161 (70%), Positives = 132/161 (81%), Gaps = 12/161 (7%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTN-- 58
MGM ++QFHVLAVDDS+IDR LIERLLKTSS+ VTA+DSG+KAL+FLGL EDEQ N
Sbjct: 1 MGMAAEAQFHVLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGL-AEDEQRNKE 59
Query: 59 --------SQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
Q ++VNLIITDYCMP MTGYDLL+KIKES SLKDIPVVIMSSEN+P+RINR
Sbjct: 60 PPSIALESHQDVEVNLIITDYCMPEMTGYDLLKKIKESKSLKDIPVVIMSSENVPARINR 119
Query: 111 CLEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNIN 151
CLE+GA+EFFLKPVQ +DVNKL+PHL+K K+ +E IN
Sbjct: 120 CLEDGADEFFLKPVQQSDVNKLRPHLLKSKVKD-EEVQQIN 159
>gi|326518312|dbj|BAJ88185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 287
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 144/197 (73%), Gaps = 20/197 (10%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS- 59
+ + ++ FHVLAVDDS++DRKLIERLLKTSS+QVT VDSG KAL+FLGL ED +S
Sbjct: 46 VAAIAEAPFHVLAVDDSVLDRKLIERLLKTSSFQVTTVDSGTKALQFLGLHAEDASISSV 105
Query: 60 ---QV---IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLE 113
Q+ + VNLIITDYCMPGMTGYDLL+KIKES+S +DIPVVIMSSENIPSRINRCLE
Sbjct: 106 HADQLDVEVNVNLIITDYCMPGMTGYDLLKKIKESSSFRDIPVVIMSSENIPSRINRCLE 165
Query: 114 EGAEEFFLKPVQLADVNKLKPHLMKGISKEIKE------------PNNINNKRKGLEEID 161
EGA EFFLKPV+L+D++KLKPH+MK KE P N ++ R + I
Sbjct: 166 EGANEFFLKPVRLSDMSKLKPHIMKSRCKEHSHEDQDLLSNSDTNPTNNSSSRDTI-TIS 224
Query: 162 SADRTRTRLNDTIDINN 178
S++ T +DTI+ +N
Sbjct: 225 SSNPTDHSSSDTINSSN 241
>gi|225465887|ref|XP_002267375.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
gi|296090339|emb|CBI40158.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/137 (80%), Positives = 121/137 (88%), Gaps = 5/137 (3%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
MGM +SQFHVLAVDDS++DRK IE+LLKTSS+QVT VDS +KALEFLGL E EQ
Sbjct: 1 MGMAAESQFHVLAVDDSLVDRKWIEKLLKTSSFQVTVVDSVSKALEFLGL-QEAEQER-- 57
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+VNLIITDY MPGMTGYDLLRKIKES SLKDIPVVIMSSENIPSRINRCLEEGAE+FF
Sbjct: 58 --KVNLIITDYSMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAEDFF 115
Query: 121 LKPVQLADVNKLKPHLM 137
LKPVQL+DVNKL+PHL+
Sbjct: 116 LKPVQLSDVNKLRPHLL 132
>gi|296090342|emb|CBI40161.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/154 (74%), Positives = 128/154 (83%), Gaps = 18/154 (11%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQ---------------VTAVDSGNKAL 45
MG+ ++QFHVLAVDDS+IDRKLIE+LLKTSS+Q VTAVDSG+KAL
Sbjct: 1 MGIAAETQFHVLAVDDSLIDRKLIEKLLKTSSFQDSKLIEKLLKTSSFQVTAVDSGSKAL 60
Query: 46 EFLGLLNEDEQTNS--QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSEN 103
EFLGL E+EQ N Q +VNLIITDY MPGMTGYDLLRKIKES+SLKDIPVVIMSSEN
Sbjct: 61 EFLGL-QEEEQRNHHPQETEVNLIITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSEN 119
Query: 104 IPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLM 137
IPSRINRCLEEGAE+FFLKPVQL+DVNKL+PHL+
Sbjct: 120 IPSRINRCLEEGAEDFFLKPVQLSDVNKLRPHLL 153
>gi|297817018|ref|XP_002876392.1| hypothetical protein ARALYDRAFT_486148 [Arabidopsis lyrata subsp.
lyrata]
gi|297322230|gb|EFH52651.1| hypothetical protein ARALYDRAFT_486148 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 120/227 (52%), Positives = 146/227 (64%), Gaps = 59/227 (25%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGL-----------L 51
M +SQFHVLAVDDS+ DRK IERLL+ SS QVT VDSG+KALEFLGL L
Sbjct: 1 MAAESQFHVLAVDDSLFDRKYIERLLQKSSCQVTTVDSGSKALEFLGLRQGIDSNDPNAL 60
Query: 52 NEDEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRC 111
++ T+ QV++VNLIITDYCMPGMTGYDLL+K+KES++ +DIPVVIMSSEN+P+RI+RC
Sbjct: 61 SKSPVTH-QVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRC 119
Query: 112 LEEGAEEFFLKPVQLADVNKLKPHLMK------------------------GISKEIK-- 145
LEEGAEEFFLKPV+LAD+NKLKPH+MK + EIK
Sbjct: 120 LEEGAEEFFLKPVRLADLNKLKPHMMKTKLKNQKLEEIEKTSKVENGIVAAAVEPEIKDS 179
Query: 146 ---------------------EPNNINNKRKGLEEIDSADRTRTRLN 171
+P++ NNKRK +EE S DR R R +
Sbjct: 180 TKVVIEILPLQQDLLLVEQEEQPSSTNNKRKSVEEGISTDRARPRFD 226
>gi|449445057|ref|XP_004140290.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
gi|449527697|ref|XP_004170846.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 156
Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 110/146 (75%), Positives = 124/146 (84%), Gaps = 11/146 (7%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLL-NEDEQTNSQV- 61
V + FHVLAVDDS IDRKLIERLLKTSSY VTAVDSG KALEFLGL+ + D+QT+S++
Sbjct: 5 VESTPFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSKIA 64
Query: 62 ---------IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL 112
+ VNLIITDY MPGM+GY+LLRKIKES SLKDIPVVIMSSEN+PSRINRCL
Sbjct: 65 PDQNHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCL 124
Query: 113 EEGAEEFFLKPVQLADVNKLKPHLMK 138
EEGAEEFFLKPVQL+DV KL+PHL+K
Sbjct: 125 EEGAEEFFLKPVQLSDVRKLRPHLIK 150
>gi|449453183|ref|XP_004144338.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 261
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/147 (70%), Positives = 126/147 (85%), Gaps = 9/147 (6%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGL---------L 51
MGMV+DS+FHVLAVDDS+IDRKLIE+LLKTSSYQVT VDSG+KALEFLG +
Sbjct: 8 MGMVSDSKFHVLAVDDSVIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGYDPGNSSIPSV 67
Query: 52 NEDEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRC 111
+ + + Q + VNL+ITDYCMP MTGYDLL+KIK S +L++IPVVIMSSEN+P+RINRC
Sbjct: 68 SSNHHHHHQEVDVNLVITDYCMPEMTGYDLLKKIKGSTALRNIPVVIMSSENVPARINRC 127
Query: 112 LEEGAEEFFLKPVQLADVNKLKPHLMK 138
LEEGAEEFFLKPVQL+DVN+L+PH++K
Sbjct: 128 LEEGAEEFFLKPVQLSDVNRLRPHMLK 154
>gi|449533717|ref|XP_004173818.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 255
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/147 (70%), Positives = 126/147 (85%), Gaps = 9/147 (6%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGL---------L 51
MGMV+DS+FHVLAVDDS+IDRKLIE+LLKTSSYQVT VDSG+KALEFLG +
Sbjct: 8 MGMVSDSKFHVLAVDDSVIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGYDPGNSSIPSV 67
Query: 52 NEDEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRC 111
+ + + Q + VNL+ITDYCMP MTGYDLL+KIK S +L++IPVVIMSSEN+P+RINRC
Sbjct: 68 SSNHHHHHQEVDVNLVITDYCMPEMTGYDLLKKIKGSTALRNIPVVIMSSENVPARINRC 127
Query: 112 LEEGAEEFFLKPVQLADVNKLKPHLMK 138
LEEGAEEFFLKPVQL+DVN+L+PH++K
Sbjct: 128 LEEGAEEFFLKPVQLSDVNRLRPHMLK 154
>gi|242084508|ref|XP_002442679.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
gi|241943372|gb|EES16517.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
Length = 236
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/162 (67%), Positives = 134/162 (82%), Gaps = 11/162 (6%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDE----QTNSQ 60
T++ FHVLAVDDS+ DRKLIERLLKTSS+QVT VDSG+KAL+FLGL ++ T+
Sbjct: 41 TETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDDHSPVPVHTDQL 100
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+ VNLIITDYCMPGMTGYDLL+KIKES+SL+DIPVVIMSSENIPSRINRCLEEGA+EFF
Sbjct: 101 DVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFF 160
Query: 121 LKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDS 162
LKPV+L+D+NKLKPH++K +E +N ++ L++ DS
Sbjct: 161 LKPVRLSDMNKLKPHILKSRCRE-------HNHQEQLQQSDS 195
>gi|224033189|gb|ACN35670.1| unknown [Zea mays]
gi|413915889|gb|AFW55821.1| response regulator 6 [Zea mays]
Length = 262
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/199 (59%), Positives = 146/199 (73%), Gaps = 33/199 (16%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ----- 56
+ T++ FHVLAVDDS+ DRKLIERLLKTSS+QVT VDSG+KAL+FLGL ++D
Sbjct: 62 AVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVH 121
Query: 57 ------TNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
+Q + VNLIITDYCMPGMTGYDLL+KIKES+SL+DIPVVIMSSENIPSRINR
Sbjct: 122 THQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINR 181
Query: 111 CLEEGAEEFFLKPVQLADVNKLKPHLMK------------GISKEIKEP-----NNINNK 153
CLEEGA+EFFLKPV+L+D+NKLKPH++K S E + P ++INN+
Sbjct: 182 CLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINNR 241
Query: 154 RK---GLEEI--DSADRTR 167
++ G EEI A+R+R
Sbjct: 242 KRKGAGTEEILPQLANRSR 260
>gi|346703374|emb|CBX25471.1| hypothetical_protein [Oryza glaberrima]
Length = 201
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/148 (70%), Positives = 128/148 (86%), Gaps = 5/148 (3%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDE----- 55
M + ++ FHVLAVDDS+ DRKLIERLLKTSS+QVT VDSG+KALEFLGL + ++
Sbjct: 1 MAVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIST 60
Query: 56 QTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEG 115
Q++ Q + VNLIITDYCMPGMTGYDLL+KIKES+ L+DIPVVIMSS+NIPSRINRCLEEG
Sbjct: 61 QSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEG 120
Query: 116 AEEFFLKPVQLADVNKLKPHLMKGISKE 143
A+EFFLKPV+L+D++KLKPH++K KE
Sbjct: 121 ADEFFLKPVRLSDMSKLKPHILKSRCKE 148
>gi|115484121|ref|NP_001065722.1| Os11g0143300 [Oryza sativa Japonica Group]
gi|71273491|emb|CAI79413.1| Type A response regulator 9 [Oryza sativa Indica Group]
gi|87116388|dbj|BAE79353.1| typeA response regulator 9 [Oryza sativa Japonica Group]
gi|108863989|gb|ABA91415.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|113644426|dbj|BAF27567.1| Os11g0143300 [Oryza sativa Japonica Group]
gi|118790795|tpd|FAA00260.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215765046|dbj|BAG86743.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185231|gb|EEC67658.1| hypothetical protein OsI_35072 [Oryza sativa Indica Group]
gi|222615502|gb|EEE51634.1| hypothetical protein OsJ_32929 [Oryza sativa Japonica Group]
Length = 201
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/148 (70%), Positives = 128/148 (86%), Gaps = 5/148 (3%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDE----- 55
M + ++ FHVLAVDDS+ DRKLIERLLKTSS+QVT VDSG+KALEFLGL + ++
Sbjct: 1 MAVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIST 60
Query: 56 QTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEG 115
Q++ Q + VNLIITDYCMPGMTGYDLL+KIKES+ L+DIPVVIMSS+NIPSRINRCLEEG
Sbjct: 61 QSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEG 120
Query: 116 AEEFFLKPVQLADVNKLKPHLMKGISKE 143
A+EFFLKPV+L+D++KLKPH++K KE
Sbjct: 121 ADEFFLKPVRLSDMSKLKPHILKSRCKE 148
>gi|357160996|ref|XP_003578944.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 225
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/148 (70%), Positives = 123/148 (83%), Gaps = 6/148 (4%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV 61
+ ++QFHVLAVDDS+ DRKLIERLLKTSS+QVT VDSG KALEFLG+ +D +
Sbjct: 3 AAIAETQFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGTKALEFLGIHGQDTPISLHA 62
Query: 62 ------IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEG 115
+ VNLIITDYCMPGMTGYDLL+KIKES+SL+DIPVVIMSSEN+PSRINRCLEEG
Sbjct: 63 DHLDVEVNVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRINRCLEEG 122
Query: 116 AEEFFLKPVQLADVNKLKPHLMKGISKE 143
A EFFLKPV+L+D++KLKPH+MK KE
Sbjct: 123 ANEFFLKPVRLSDMSKLKPHIMKSRCKE 150
>gi|162459272|ref|NP_001104857.1| LOC541632 [Zea mays]
gi|12060388|dbj|BAB20581.1| response regulator 6 [Zea mays]
Length = 235
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/199 (59%), Positives = 146/199 (73%), Gaps = 33/199 (16%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ----- 56
+ T++ FHVLAVDDS+ DRKLIERLLKTSS+QVT VDSG+KAL+FLGL ++D
Sbjct: 35 AVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVH 94
Query: 57 ------TNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
+Q + VNLIITDYCMPGMTGYDLL+KIKES+SL+DIPVVIMSSENIPSRINR
Sbjct: 95 THQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINR 154
Query: 111 CLEEGAEEFFLKPVQLADVNKLKPHLMK------------GISKEIKEP-----NNINNK 153
CLEEGA+EFFLKPV+L+D+NKLKPH++K S E + P ++INN+
Sbjct: 155 CLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINNR 214
Query: 154 RK---GLEEI--DSADRTR 167
++ G EEI A+R+R
Sbjct: 215 KRKGAGTEEILPQLANRSR 233
>gi|194694438|gb|ACF81303.1| unknown [Zea mays]
Length = 235
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/199 (59%), Positives = 146/199 (73%), Gaps = 33/199 (16%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ----- 56
+ T++ FHVLAVDDS+ DRKLIERLLKTSS+QVT VDSG+KAL+FLGL ++D
Sbjct: 35 AVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVH 94
Query: 57 ------TNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
+Q + VNLIITDYCMPGMTGYDLL+KIKES+SL+DIPVVIMSSENIPSRINR
Sbjct: 95 THQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINR 154
Query: 111 CLEEGAEEFFLKPVQLADVNKLKPHLMK------------GISKEIKEP-----NNINNK 153
CLEEGA+EFFLKPV+L+D+NKLKPH++K S E + P ++INN+
Sbjct: 155 CLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTISSSDSINNR 214
Query: 154 RK---GLEEI--DSADRTR 167
++ G EEI A+R+R
Sbjct: 215 KRKGAGTEEILPQLANRSR 233
>gi|346703189|emb|CBX25288.1| hypothetical_protein [Oryza brachyantha]
Length = 200
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/148 (71%), Positives = 125/148 (84%), Gaps = 5/148 (3%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDE----- 55
M + ++ FHVLAVDDS+ DRKLIERLLKTSS+QVT VDSG+KALEFLGL ++
Sbjct: 1 MAVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHGHEDSPISV 60
Query: 56 QTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEG 115
Q + Q VNLIITDYCMPGMTGYDLL+KIKES+ L+DIPVVIMSSENIPSRINRCLEEG
Sbjct: 61 QADQQEAAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSENIPSRINRCLEEG 120
Query: 116 AEEFFLKPVQLADVNKLKPHLMKGISKE 143
A+EFFLKPV+L+D++KLKPH++K KE
Sbjct: 121 ADEFFLKPVRLSDMSKLKPHILKSRCKE 148
>gi|297612639|ref|NP_001066118.2| Os12g0139400 [Oryza sativa Japonica Group]
gi|87116390|dbj|BAE79354.1| typeA response regulator 10 [Oryza sativa Japonica Group]
gi|108862172|gb|ABA96406.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|118790800|tpd|FAA00261.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218186409|gb|EEC68836.1| hypothetical protein OsI_37415 [Oryza sativa Indica Group]
gi|222616614|gb|EEE52746.1| hypothetical protein OsJ_35177 [Oryza sativa Japonica Group]
gi|255670034|dbj|BAF29137.2| Os12g0139400 [Oryza sativa Japonica Group]
Length = 201
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/148 (70%), Positives = 128/148 (86%), Gaps = 5/148 (3%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDE----- 55
M + ++ FHVLAVDDS+ DRKLIERLLKTSS+QVT VDSG+KALEFLGL + ++
Sbjct: 1 MAVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPIST 60
Query: 56 QTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEG 115
Q++ Q + VNLIITDYCMPGMTGYDLL+KIKES+ L+DIPVVIMSS+NIPSRINRCLEEG
Sbjct: 61 QSDQQEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEG 120
Query: 116 AEEFFLKPVQLADVNKLKPHLMKGISKE 143
A+EFFLKPV+L+D++KLKPH++K KE
Sbjct: 121 ADEFFLKPVRLSDMSKLKPHILKSRCKE 148
>gi|195622036|gb|ACG32848.1| RR10 - Corn type-A response regulator [Zea mays]
Length = 204
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 146/200 (73%), Gaps = 34/200 (17%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ----- 56
+ T++ FHVLAVDDS+ DRKLIERLLKTSS+QVT VDSG+KAL+FLGL ++D
Sbjct: 3 AVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVH 62
Query: 57 ------TNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
+Q + VNLIITDYCMPGMTGYDLL+KIKES+SL+DIPVVIMSSENIPSRINR
Sbjct: 63 THQLDVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINR 122
Query: 111 CLEEGAEEFFLKPVQLADVNKLKPHLMK------------GISKEIKEP------NNINN 152
CLEEGA+EFFLKPV+L+D+NKLKPH++K S E + P ++INN
Sbjct: 123 CLEEGADEFFLKPVRLSDMNKLKPHILKSRCNQEQHQQSDSHSGERRNPTIGSSSDSINN 182
Query: 153 KRK---GLEEI--DSADRTR 167
+++ G EEI A+R+R
Sbjct: 183 RKRKGAGTEEILPQLANRSR 202
>gi|388495492|gb|AFK35812.1| unknown [Lotus japonicus]
Length = 239
Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/156 (70%), Positives = 132/156 (84%), Gaps = 12/156 (7%)
Query: 1 MGMVT-DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTN- 58
MGM +SQ+HVLAVDDSIIDRKLIERLLKTSSYQVT VDSG+KALEFLGL +E+E++N
Sbjct: 1 MGMAAAESQYHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGL-HENEESNP 59
Query: 59 ---------SQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRIN 109
Q ++VNL+ITDYCMPGMTGYDLL+KIKES+SL++IPVVIMSSEN+PSRIN
Sbjct: 60 NTPSISPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRIN 119
Query: 110 RCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIK 145
RCLEEGAEEFFLKPV+ +D+ +LK H+ K K+I+
Sbjct: 120 RCLEEGAEEFFLKPVRQSDLVRLKSHIKKTNLKKIQ 155
>gi|388512609|gb|AFK44366.1| unknown [Lotus japonicus]
Length = 239
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/156 (69%), Positives = 131/156 (83%), Gaps = 12/156 (7%)
Query: 1 MGMVT-DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTN- 58
MGM +SQ+HVLAVDDSIIDRKLIERLLKTSSYQVT VDSG+KALEFLGL +E+E++N
Sbjct: 1 MGMAAAESQYHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGL-HENEESNP 59
Query: 59 ---------SQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRIN 109
Q ++VNL+ITDYCMPGMTGYDLL+KIKES+SL++IPVV MSSEN+PSRIN
Sbjct: 60 NTPSISPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVTMSSENVPSRIN 119
Query: 110 RCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIK 145
RCLEEGAEEFFLKPV+ +D+ +LK H+ K K+I+
Sbjct: 120 RCLEEGAEEFFLKPVRQSDLVRLKSHIKKTNLKKIQ 155
>gi|109631208|gb|ABG35780.1| SRR198 [Striga asiatica]
Length = 238
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/149 (71%), Positives = 128/149 (85%), Gaps = 12/149 (8%)
Query: 1 MGMVT-DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS 59
MGM T DSQFHVLAVDDS+IDRKLIE+LLK SS+QVT VDSG+KALEFLG + DE++NS
Sbjct: 1 MGMATEDSQFHVLAVDDSLIDRKLIEKLLKNSSFQVTTVDSGSKALEFLGW-HRDERSNS 59
Query: 60 ----------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRIN 109
Q ++VNL+ITDYCMPGMTGYDLL+K+KES+SLK+IPVVI+SSEN+PSRI
Sbjct: 60 KGTSVSPKTHQEVEVNLVITDYCMPGMTGYDLLKKMKESSSLKNIPVVIVSSENVPSRIT 119
Query: 110 RCLEEGAEEFFLKPVQLADVNKLKPHLMK 138
RCLEEGAEEFFLKP++L DVNKL P++++
Sbjct: 120 RCLEEGAEEFFLKPMKLTDVNKLWPYMLR 148
>gi|359495010|ref|XP_003634897.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR9-like [Vitis vinifera]
Length = 141
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/138 (78%), Positives = 120/138 (86%), Gaps = 6/138 (4%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
MGM +SQFHVLAVDDS+IDRK IE+LLKTSS+QVT +DS +KALEFLG+ E EQ
Sbjct: 1 MGMAAESQFHVLAVDDSLIDRKWIEKLLKTSSFQVTVLDSVSKALEFLGV-QEAEQER-- 57
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+VNLIITDY MPGMTGYDLLRKIKES SLKDIPVVIMSSENIPSRI RCLEEGAE+FF
Sbjct: 58 --KVNLIITDYSMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRITRCLEEGAEDFF 115
Query: 121 LK-PVQLADVNKLKPHLM 137
LK PVQL+DVNKL+PHL+
Sbjct: 116 LKLPVQLSDVNKLRPHLL 133
>gi|449449356|ref|XP_004142431.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
gi|449527272|ref|XP_004170636.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 173
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 135/175 (77%), Gaps = 17/175 (9%)
Query: 1 MGMVTDSQ--FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNE----- 53
M +++ Q FHVLAVDDS++DRKLIERLLKTSS+ VT VDSG+KALE LGL+ E
Sbjct: 1 MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTN 60
Query: 54 --------DEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIP 105
D + + Q I+VNLIITDYCMP MTG+DLLRKIKES SLKDIPVVIMSSEN+P
Sbjct: 61 HSSPISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVP 120
Query: 106 SRINRCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEI 160
SRINRCLEEGAEEF LKPV+L+DVNKLKP + +GI + + N++ KRK +E I
Sbjct: 121 SRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHL--KRKEMEII 173
>gi|108863990|gb|ABA91414.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
Length = 208
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/155 (67%), Positives = 128/155 (82%), Gaps = 12/155 (7%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQ-------VTAVDSGNKALEFLGLLNE 53
M + ++ FHVLAVDDS+ DRKLIERLLKTSS+Q VT VDSG+KALEFLGL +
Sbjct: 1 MAVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQGLAFVCVVTTVDSGSKALEFLGLHDH 60
Query: 54 DE-----QTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI 108
++ Q++ Q + VNLIITDYCMPGMTGYDLL+KIKES+ L+DIPVVIMSS+NIPSRI
Sbjct: 61 EDSPISTQSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRI 120
Query: 109 NRCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKE 143
NRCLEEGA+EFFLKPV+L+D++KLKPH++K KE
Sbjct: 121 NRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKE 155
>gi|346703278|emb|CBX25376.1| hypothetical_protein [Oryza brachyantha]
Length = 215
Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 108/155 (69%), Positives = 126/155 (81%), Gaps = 12/155 (7%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQ-------VTAVDSGNKALEFLGL-LN 52
M + ++ FHVLAVDDS+ DRKLIERLLKTSS+Q VT VDSG+KALEFLGL +
Sbjct: 1 MAVAIETPFHVLAVDDSLPDRKLIERLLKTSSFQGFGFVGVVTTVDSGSKALEFLGLHAH 60
Query: 53 EDE----QTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI 108
ED Q + Q VNLIITDYCMPGMTGYDLL+KIKES+ L+DIPVVIMSSENIPSRI
Sbjct: 61 EDSPISVQADQQEAAVNLIITDYCMPGMTGYDLLKKIKESSCLRDIPVVIMSSENIPSRI 120
Query: 109 NRCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKE 143
NRCLEEGA+EFFLKPV+L+D++KLKPH++K KE
Sbjct: 121 NRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKE 155
>gi|357126832|ref|XP_003565091.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 213
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/161 (65%), Positives = 128/161 (79%), Gaps = 13/161 (8%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT------ 57
+S+FHVLAVDDS+IDRKLIE LLKTSSYQVT VDSG+KALE LGL +E + +
Sbjct: 6 AAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEGDSSSASSSP 65
Query: 58 -----NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL 112
+ Q + VNLIITDYCMPGMTGYDLLR++K S+SLKDIPVVIMSSEN+P+RINRCL
Sbjct: 66 SSSSPDHQEVDVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARINRCL 125
Query: 113 EEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNINNK 153
E+GAEEFFLKPV+LAD+ KLK HL++ K+ ++P +K
Sbjct: 126 EDGAEEFFLKPVKLADMKKLKSHLLR--RKQPQKPEQAPDK 164
>gi|33330868|gb|AAQ10677.1| type-A response regulator [Catharanthus roseus]
Length = 188
Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 104/137 (75%), Positives = 120/137 (87%), Gaps = 4/137 (2%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ----T 57
V D FHVLAVDDS++DRKLIERLLKTS+YQVT VDSG KALEFLGLL+E+++
Sbjct: 3 AQVLDVGFHVLAVDDSLVDRKLIERLLKTSAYQVTVVDSGIKALEFLGLLDEEKEISGSN 62
Query: 58 NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAE 117
+ QV++VNLIITDY MPGMTGYDLLRK+KES+ LKDIPVVIMSSENIPSRINRCLEEGA+
Sbjct: 63 HQQVVEVNLIITDYSMPGMTGYDLLRKVKESSYLKDIPVVIMSSENIPSRINRCLEEGAD 122
Query: 118 EFFLKPVQLADVNKLKP 134
+FFLKPV+ +DVNKL P
Sbjct: 123 DFFLKPVKQSDVNKLIP 139
>gi|109631206|gb|ABG35779.1| SRR200 [Striga asiatica]
Length = 158
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/143 (74%), Positives = 120/143 (83%), Gaps = 6/143 (4%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV 61
G+ + +FHVLAVDDSIIDRKLIERLLKTSSYQVT VDSG KALEFLGLL+ D+ + V
Sbjct: 3 GLGQEMRFHVLAVDDSIIDRKLIERLLKTSSYQVTVVDSGVKALEFLGLLDNDDTNSKSV 62
Query: 62 IQ------VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEG 115
Q V+LIITDY MP +TGYDLLRKIKES LKDIPVVIMSSENIPSRIN CLE+G
Sbjct: 63 SQPRSNHIVDLIITDYSMPALTGYDLLRKIKESEILKDIPVVIMSSENIPSRINSCLEQG 122
Query: 116 AEEFFLKPVQLADVNKLKPHLMK 138
A+EFF+KPVQ +DVNKL+PHLM+
Sbjct: 123 AQEFFVKPVQQSDVNKLRPHLMR 145
>gi|346703759|emb|CBX24427.1| hypothetical_protein [Oryza glaberrima]
Length = 207
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/154 (68%), Positives = 126/154 (81%), Gaps = 11/154 (7%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQ-------VTAVDSGNKALEFLGLLNE 53
M + ++ FHVLAVDDS+ DRKLIERLLKTSS+Q VT VDSG+KALEFLGL +
Sbjct: 1 MAVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQGLAFVCVVTTVDSGSKALEFLGLHDH 60
Query: 54 DEQTNS----QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRIN 109
++ S Q + VNLIITDYCMPGMTGYDLL+KIKES+ L+DIPVVIMSS+NIPSRIN
Sbjct: 61 EDSPISAQSDQQVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRIN 120
Query: 110 RCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKE 143
RCLEEGA+EFFLKPV+L+D++KLKPH++K KE
Sbjct: 121 RCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKE 154
>gi|225465889|ref|XP_002266250.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 150
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/137 (75%), Positives = 118/137 (86%), Gaps = 1/137 (0%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
MGM +SQFHVLAVDDSIIDRK IE+LLKTSS+QVT V S +KALEFLGL +++ + Q
Sbjct: 1 MGMAGESQFHVLAVDDSIIDRKWIEKLLKTSSFQVTVVGSVSKALEFLGLQKAEQRNHHQ 60
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+VNLIIT Y MPGMTGYDLL+KIKES SLK IPVVIMSSENIPSRINRCL EG ++FF
Sbjct: 61 GTKVNLIITYYSMPGMTGYDLLKKIKESTSLKGIPVVIMSSENIPSRINRCL-EGEKDFF 119
Query: 121 LKPVQLADVNKLKPHLM 137
LKPVQL+DVNKL+PHL+
Sbjct: 120 LKPVQLSDVNKLRPHLL 136
>gi|296090340|emb|CBI40159.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/137 (75%), Positives = 118/137 (86%), Gaps = 1/137 (0%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
MGM +SQFHVLAVDDSIIDRK IE+LLKTSS+QVT V S +KALEFLGL +++ + Q
Sbjct: 1 MGMAGESQFHVLAVDDSIIDRKWIEKLLKTSSFQVTVVGSVSKALEFLGLQKAEQRNHHQ 60
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+VNLIIT Y MPGMTGYDLL+KIKES SLK IPVVIMSSENIPSRINRCL EG ++FF
Sbjct: 61 GTKVNLIITYYSMPGMTGYDLLKKIKESTSLKGIPVVIMSSENIPSRINRCL-EGEKDFF 119
Query: 121 LKPVQLADVNKLKPHLM 137
LKPVQL+DVNKL+PHL+
Sbjct: 120 LKPVQLSDVNKLRPHLL 136
>gi|224713626|gb|ACN62086.1| response regulator 1 [Pinus pinea]
Length = 184
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 100/155 (64%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+ S+FHVL VDDS++DRKLIE+LLK SSY+VTAVD KAL+FLGL ++++ N IQ
Sbjct: 10 ASTSEFHVLVVDDSVLDRKLIEKLLKISSYRVTAVDRVRKALQFLGLEDDEDDLNVDNIQ 69
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
VN+IITDYCMPGMTGYDLLR++KES+++KDIPVVIMSSEN+ SRI+RC+ EGAEEF LKP
Sbjct: 70 VNMIITDYCMPGMTGYDLLRRVKESSAVKDIPVVIMSSENVESRISRCMSEGAEEFLLKP 129
Query: 124 VQLADVNKLKPHLM-KGISKEIKEPNNINNKRKGL 157
VQL+DV KL+ H++ KG S++ + + NNKRK +
Sbjct: 130 VQLSDVKKLRSHILNKGGSRDQQSTSLSNNKRKTM 164
>gi|226532164|ref|NP_001149868.1| RR4 - Corn type-A response regulator [Zea mays]
gi|195635163|gb|ACG37050.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 236
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/138 (71%), Positives = 119/138 (86%), Gaps = 4/138 (2%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT----NSQ 60
+S+FHVLAVDDS++DRKLIE LLKTSSYQVT VDSG+KALE LGL + + + Q
Sbjct: 6 AESRFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQ 65
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
I VNLIITDYCMPGMTGYDLL+++K S+SLKDIPVVIMSSEN+P+RI+RCL++GAEEFF
Sbjct: 66 EIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFF 125
Query: 121 LKPVQLADVNKLKPHLMK 138
LKPV+LAD+ KLK HL+K
Sbjct: 126 LKPVKLADMKKLKSHLLK 143
>gi|408795928|gb|AFU91979.1| response regulator 1 protein [Pinus pinaster]
Length = 184
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/155 (63%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+ S+FHVLAVDDS++DRKLIE+LLK SSY+VT VDS KAL+FLGL ++++ N IQ
Sbjct: 10 ASTSEFHVLAVDDSVLDRKLIEKLLKISSYRVTTVDSVRKALQFLGLEDDEDDLNVDNIQ 69
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
VN+IITDYCMPGMTGYDLLR++KES+++KDIPVVIMSSEN+ SR +RC+ EGA+EF LKP
Sbjct: 70 VNMIITDYCMPGMTGYDLLRRVKESSAVKDIPVVIMSSENVESRKSRCMSEGAQEFLLKP 129
Query: 124 VQLADVNKLKPHLM-KGISKEIKEPNNINNKRKGL 157
VQL+DV KL+ H++ KG S++ + + NNKRK +
Sbjct: 130 VQLSDVKKLRSHILNKGRSRDQQSTSPSNNKRKTM 164
>gi|162459124|ref|NP_001104856.1| response regulator 5 [Zea mays]
gi|12060386|dbj|BAB20580.1| response regulator 5 [Zea mays]
Length = 236
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/138 (71%), Positives = 119/138 (86%), Gaps = 4/138 (2%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT----NSQ 60
+S+FHVLAVDDS++DRKLIE LLKTSSYQVT VDSG+KALE LGL + + + Q
Sbjct: 6 AESRFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQ 65
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
I VNLIITDYCMPGMTGYDLL+++K S+SLKDIPVVIMSSEN+P+RI+RCL++GAEEFF
Sbjct: 66 EIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFF 125
Query: 121 LKPVQLADVNKLKPHLMK 138
LKPV+LAD+ KLK HL+K
Sbjct: 126 LKPVKLADMKKLKSHLLK 143
>gi|212274883|ref|NP_001130159.1| uncharacterized protein LOC100191253 [Zea mays]
gi|194688426|gb|ACF78297.1| unknown [Zea mays]
gi|194695472|gb|ACF81820.1| unknown [Zea mays]
gi|223975127|gb|ACN31751.1| unknown [Zea mays]
Length = 242
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/137 (72%), Positives = 119/137 (86%), Gaps = 4/137 (2%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT----NSQV 61
+S+FHVLAVDDS++DRKLIE LLKTSSYQVT VDSG+KALE LGL + + + Q
Sbjct: 7 ESRFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQE 66
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
I VNLIITDYCMPGMTGYDLL+++K S+SLKDIPVVIMSSEN+P+RI+RCL++GAEEFFL
Sbjct: 67 IDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFL 126
Query: 122 KPVQLADVNKLKPHLMK 138
KPV+LAD+ KLK HL+K
Sbjct: 127 KPVKLADMKKLKSHLLK 143
>gi|115442281|ref|NP_001045420.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|15528802|dbj|BAB64697.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273481|emb|CAI79408.1| Type A response regulator 4 [Oryza sativa Indica Group]
gi|87116386|dbj|BAE79352.1| typeA response regulator 4 [Oryza sativa Japonica Group]
gi|113534951|dbj|BAF07334.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|118790806|tpd|FAA00262.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125529138|gb|EAY77252.1| hypothetical protein OsI_05226 [Oryza sativa Indica Group]
gi|125573340|gb|EAZ14855.1| hypothetical protein OsJ_04783 [Oryza sativa Japonica Group]
gi|215678767|dbj|BAG95204.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 232
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/143 (72%), Positives = 121/143 (84%), Gaps = 9/143 (6%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS----- 59
+S+FHVLAVDDS+IDRKLIE LLK SSYQVT VDSG+KALE LGL +E + ++S
Sbjct: 6 AESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSSPSSS 65
Query: 60 ----QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEG 115
Q I VNLIITDYCMPGMTGYDLL+++K S+SLKDIPVVIMSSEN+P+RINRCLE+G
Sbjct: 66 SPDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDG 125
Query: 116 AEEFFLKPVQLADVNKLKPHLMK 138
AEEFFLKPV+LAD+ KLK HL+K
Sbjct: 126 AEEFFLKPVKLADMKKLKSHLLK 148
>gi|242055597|ref|XP_002456944.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
gi|241928919|gb|EES02064.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
Length = 245
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/153 (67%), Positives = 123/153 (80%), Gaps = 11/153 (7%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ-------- 56
+S+FHVLAVDDSI+DRKLIE LLK SSYQVT VDSG+KALE LGL + +
Sbjct: 6 AESRFHVLAVDDSIVDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDNGAEDASSPSSS 65
Query: 57 -TNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEG 115
+ Q I VNLIITDYCMPGMTGYDLL+++K S+SLKDIPVVIMSSEN+P+RI+RCLE+G
Sbjct: 66 SPDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 125
Query: 116 AEEFFLKPVQLADVNKLKPHLMKGISKEIKEPN 148
AEEFFLKPV+LAD+ KLK HL+K K+ K+P
Sbjct: 126 AEEFFLKPVKLADMKKLKSHLLK--RKQPKKPQ 156
>gi|359828772|gb|AEV76988.1| type A response regulator 4, partial [Triticum aestivum]
Length = 203
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 120/144 (83%), Gaps = 10/144 (6%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT------- 57
+S+FHVLAVDDS+IDRKLIE LLKTSSYQVT VDSG+KALE LG +E + +
Sbjct: 6 AESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGFRDEGDDSSSPPSSS 65
Query: 58 ---NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE 114
+ Q + VNLIITDYCMPGMTGYDLLR++K S+SLKDIPVVIMSSEN+P+RI+RCLE+
Sbjct: 66 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLED 125
Query: 115 GAEEFFLKPVQLADVNKLKPHLMK 138
GAEEFFLKPV+LAD+ KLK HL++
Sbjct: 126 GAEEFFLKPVKLADMKKLKSHLVR 149
>gi|357456553|ref|XP_003598557.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355487605|gb|AES68808.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|357595944|gb|AET86869.1| cytokinin resposne regulator 9 [Medicago truncatula]
Length = 164
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/159 (69%), Positives = 125/159 (78%), Gaps = 16/159 (10%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS------- 59
+QFHVLAVDDS+IDR LIERLLKTSS+ VT VDSG KAL+FLGL+ EDE N
Sbjct: 2 AQFHVLAVDDSVIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLV-EDEVRNEKPHSIAA 60
Query: 60 ---QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGA 116
QV++VNLIITDYCMPGMTGYDLLRKIKES SLKDIPVVIMSSEN+ + EEGA
Sbjct: 61 ETDQVVEVNLIITDYCMPGMTGYDLLRKIKESNSLKDIPVVIMSSENVHQGLT---EEGA 117
Query: 117 EEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRK 155
EEFFLKPVQ +DVNKLKPHL+K +K E + INNKR+
Sbjct: 118 EEFFLKPVQQSDVNKLKPHLLK--TKVKNEDDLINNKRR 154
>gi|226492050|ref|NP_001146776.1| uncharacterized protein LOC100280379 [Zea mays]
gi|223942947|gb|ACN25557.1| unknown [Zea mays]
gi|413951289|gb|AFW83938.1| response regulator 4 [Zea mays]
Length = 233
Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 103/163 (63%), Positives = 123/163 (75%), Gaps = 21/163 (12%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ-------- 56
+S+FHVLAVDDSIIDRKLIE LLK+SSYQVT VDSGNKALE LGL + +
Sbjct: 6 AESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGAEDASPPSSS 65
Query: 57 --------TNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI 108
+ Q I V+LIITDYCMPGMTGYDLL+++K S+SLKDIPVVIMSSEN+P+RI
Sbjct: 66 SSSSSSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARI 125
Query: 109 NRCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNIN 151
+RCL++GAEEFFLKPV+ AD+ KLK HL+K K+PN N
Sbjct: 126 SRCLQDGAEEFFLKPVKPADMKKLKSHLLKR-----KQPNQKN 163
>gi|195644464|gb|ACG41700.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 234
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 118/149 (79%), Gaps = 15/149 (10%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ-------- 56
+S+FHVLAVDDSIIDRKLIE LLK+SSYQVT V+SGNKALE LGL + +
Sbjct: 6 AESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVESGNKALELLGLRDNGAEDASPPSSS 65
Query: 57 -------TNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRIN 109
+ Q I V+LIITDYCMPGMTGYDLL+++K S+SLKDIPVVIMSSEN+P+RI+
Sbjct: 66 SSSSSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARIS 125
Query: 110 RCLEEGAEEFFLKPVQLADVNKLKPHLMK 138
RCL++GAEEFFLKPV+ AD+ KLK HL+K
Sbjct: 126 RCLQDGAEEFFLKPVKPADMKKLKSHLLK 154
>gi|162459025|ref|NP_001104855.1| LOC541630 [Zea mays]
gi|12060384|dbj|BAB20579.1| response regulator 4 [Zea mays]
Length = 235
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 118/150 (78%), Gaps = 16/150 (10%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ-------- 56
+S+FHVLAVDDSIIDRKLIE LLK+SSYQVT V+SGNKALE LGL + +
Sbjct: 6 AESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVESGNKALELLGLRDNGAEDASPPSSS 65
Query: 57 --------TNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI 108
+ Q I V+LIITDYCMPGMTGYDLL+++K S+SLKDIPVVIMSSEN+P+RI
Sbjct: 66 SSSSSSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARI 125
Query: 109 NRCLEEGAEEFFLKPVQLADVNKLKPHLMK 138
+RCL++GAEEFFLKPV+ AD+ KLK HL+K
Sbjct: 126 SRCLQDGAEEFFLKPVKPADMKKLKSHLLK 155
>gi|109390454|gb|ABG33766.1| reponse regulator 6 [Musa acuminata]
Length = 156
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/131 (73%), Positives = 110/131 (83%), Gaps = 7/131 (5%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS- 59
+ + ++ FHVLAVDDS++DRKLIERLLKTSS+QVT VDSG KAL+FLGL ED +S
Sbjct: 26 VAAIAEAPFHVLAVDDSVLDRKLIERLLKTSSFQVTTVDSGTKALQFLGLHAEDASISSV 85
Query: 60 ---QV---IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLE 113
Q+ + VNLIITDYCMPGMTGYDLL+KIKES+S +DIPVVIMSSENIPSRINRCLE
Sbjct: 86 HADQLDVEVNVNLIITDYCMPGMTGYDLLKKIKESSSFRDIPVVIMSSENIPSRINRCLE 145
Query: 114 EGAEEFFLKPV 124
EGA EFFLKPV
Sbjct: 146 EGANEFFLKPV 156
>gi|309951230|emb|CBX43985.1| putative A-type response regulator 3 [Populus x canadensis]
Length = 242
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/153 (62%), Positives = 117/153 (76%), Gaps = 13/153 (8%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS-- 59
G + FHVLAVDDS IDRKL+ERLLK SSYQVT VDSG+KALE+LGLL+ + N+
Sbjct: 38 GEEEEKHFHVLAVDDSFIDRKLLERLLKVSSYQVTFVDSGDKALEYLGLLDSIDNVNATS 97
Query: 60 ----------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRIN 109
+ ++VNLI+TDYCMPGM+GYDLL+++K S KD+PVV+MSSENIPSRI
Sbjct: 98 SSSSSQSPQQEGMKVNLIMTDYCMPGMSGYDLLKRVKGSY-WKDVPVVVMSSENIPSRIR 156
Query: 110 RCLEEGAEEFFLKPVQLADVNKLKPHLMKGISK 142
CLEEGAEEF LKP+QL+DV KL+ HL+K + K
Sbjct: 157 MCLEEGAEEFLLKPLQLSDVEKLQTHLLKSLDK 189
>gi|224066817|ref|XP_002302230.1| type-a response regulator [Populus trichocarpa]
gi|222843956|gb|EEE81503.1| type-a response regulator [Populus trichocarpa]
Length = 243
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 95/153 (62%), Positives = 117/153 (76%), Gaps = 13/153 (8%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS-- 59
G + FHVLAVDDS IDRKL+ERLLK SSYQVT VDSG+KALE+LGLL+ + N+
Sbjct: 39 GEEEEKHFHVLAVDDSFIDRKLLERLLKVSSYQVTFVDSGDKALEYLGLLDSIDNVNATS 98
Query: 60 ----------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRIN 109
+ ++VNLI+TDYCMPGM+GYDLL+++K S KD+PVV+MSSENIPSRI
Sbjct: 99 SSSSSQSPQQEGMKVNLIMTDYCMPGMSGYDLLKRVKGSY-WKDVPVVVMSSENIPSRIR 157
Query: 110 RCLEEGAEEFFLKPVQLADVNKLKPHLMKGISK 142
CLEEGAEEF LKP+QL+DV KL+ HL+K + K
Sbjct: 158 MCLEEGAEEFLLKPLQLSDVEKLQTHLLKSLDK 190
>gi|296090341|emb|CBI40160.3| unnamed protein product [Vitis vinifera]
Length = 123
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/122 (78%), Positives = 105/122 (86%), Gaps = 5/122 (4%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
MGM +SQFHVLAVDDS+IDRK IE+LLKTSS+QVT +DS +KALEFLG+ E EQ
Sbjct: 1 MGMAAESQFHVLAVDDSLIDRKWIEKLLKTSSFQVTVLDSVSKALEFLGV-QEAEQER-- 57
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+VNLIITDY MPGMTGYDLLRKIKES SLKDIPVVIMSSENIPSRI RCLEEGAE+FF
Sbjct: 58 --KVNLIITDYSMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRITRCLEEGAEDFF 115
Query: 121 LK 122
LK
Sbjct: 116 LK 117
>gi|15218550|ref|NP_172517.1| two-component response regulator ARR4 [Arabidopsis thaliana]
gi|51315817|sp|O82798.1|ARR4_ARATH RecName: Full=Two-component response regulator ARR4; AltName:
Full=Response regulator 1
gi|5091539|gb|AAD39568.1|AC007067_8 T10O24.8 [Arabidopsis thaliana]
gi|3273196|dbj|BAA31143.1| responce regulator1 [Arabidopsis thaliana]
gi|3323583|gb|AAC26636.1| two-component response regulator homolog [Arabidopsis thaliana]
gi|3953597|dbj|BAA34726.1| response regulator 4 [Arabidopsis thaliana]
gi|87116590|gb|ABD19659.1| At1g10470 [Arabidopsis thaliana]
gi|110740750|dbj|BAE98474.1| putative response regulator 3 [Arabidopsis thaliana]
gi|332190462|gb|AEE28583.1| two-component response regulator ARR4 [Arabidopsis thaliana]
Length = 259
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/148 (61%), Positives = 120/148 (81%), Gaps = 6/148 (4%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS++DR +IERLL+ +S +VTAVDSG +ALEFLGL NE ++V+LI
Sbjct: 33 EVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLI 92
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITDYCMPGMTGY+LL+KIKES++ +++PVVIMSSEN+ +RI+RCLEEGA++F LKPV+LA
Sbjct: 93 ITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLA 152
Query: 128 DVNKLKPHLMKGISKEIKEPNNINNKRK 155
DV +L+ HL +K++K N NKRK
Sbjct: 153 DVKRLRSHL----TKDVKLSN--GNKRK 174
>gi|13173408|gb|AAK14395.1|AF339732_1 response regulator protein [Dianthus caryophyllus]
Length = 264
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 91/157 (57%), Positives = 121/157 (77%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S+ HVLAVDDS+IDRK+IERLLKT+S +VT VDSG +ALEFLGL E + ++++L
Sbjct: 33 SEAHVLAVDDSLIDRKVIERLLKTTSCKVTVVDSGMRALEFLGLDAEQRTSVVDGLKIDL 92
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
IITDYCMPGMTGY+LL+KIKES++ K+ PVVIMSSEN+ +RI+RCLEEGAE+F LKPV+L
Sbjct: 93 IITDYCMPGMTGYELLKKIKESSTFKETPVVIMSSENVIARIDRCLEEGAEDFILKPVKL 152
Query: 127 ADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSA 163
+DV +L+ ++ K + NKRK ++ D +
Sbjct: 153 SDVKRLRDYMTNKYDKSNSRVISGTNKRKQMDGSDQS 189
>gi|356562779|ref|XP_003549646.1| PREDICTED: two-component response regulator ARR5-like isoform 1
[Glycine max]
Length = 206
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/147 (60%), Positives = 119/147 (80%), Gaps = 3/147 (2%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS++DRK+IERLLK SS +VT V+SG +AL++LGL E+ ++VNLI
Sbjct: 25 ELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLEGENGSLGFDSVKVNLI 84
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+TDY MPGMTGY+LL+KIKES+ ++IPVVIMSSEN+ +RI+RCLEEGAE+F LKPV+L+
Sbjct: 85 MTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLS 144
Query: 128 DVNKLKPHLMKGISKEIKEPNNINNKR 154
DV +LK +MKG ++KE I++KR
Sbjct: 145 DVRRLKDFIMKG---KVKEGEKISHKR 168
>gi|297849384|ref|XP_002892573.1| hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp.
lyrata]
gi|297338415|gb|EFH68832.1| hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 124/155 (80%), Gaps = 6/155 (3%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS++DR +IERLL+ +S +VTAVDSG +ALEFLGL NE ++V+LI
Sbjct: 30 EVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLI 89
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITDYCMPGMTGY+LL+KIKES++ +++PVVIMSSEN+ +RI+RCLEEGA++F LKPV+LA
Sbjct: 90 ITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLA 149
Query: 128 DVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDS 162
DV +L+ HL +K++K N NKRK ++ DS
Sbjct: 150 DVKRLRNHL----TKDVKLSN--GNKRKLPDDSDS 178
>gi|449434875|ref|XP_004135221.1| PREDICTED: two-component response regulator ARR3-like [Cucumis
sativus]
gi|449478516|ref|XP_004155339.1| PREDICTED: two-component response regulator ARR3-like [Cucumis
sativus]
Length = 233
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 130/161 (80%), Gaps = 9/161 (5%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV--- 61
+DS+ HVLAVDDS++DR +IERLL+ ++ +VTAVDSG +AL++LGL +E TNSQV
Sbjct: 25 SDSEVHVLAVDDSLVDRTVIERLLRLTACRVTAVDSGIRALQYLGLQDE---TNSQVGFD 81
Query: 62 -IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
++V++IITDYCMPGMTGY+LL+KIKES++L++IPVVIMSSEN+ +RI+RCLEEGAE+F
Sbjct: 82 GLKVDMIITDYCMPGMTGYELLKKIKESSTLREIPVVIMSSENVVARIDRCLEEGAEDFI 141
Query: 121 LKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEID 161
+KPV+L+DV +L+ + M G K E + I NKRK E D
Sbjct: 142 VKPVKLSDVKRLREY-MVGDEKTGNERSGI-NKRKLREPCD 180
>gi|15218957|ref|NP_176202.1| two-component response regulator ARR3 [Arabidopsis thaliana]
gi|51316126|sp|Q9ZWS9.1|ARR3_ARATH RecName: Full=Two-component response regulator ARR3
gi|5080824|gb|AAD39333.1|AC007258_22 response regulator 3 [Arabidopsis thaliana]
gi|3953595|dbj|BAA34725.1| response regulator 3 [Arabidopsis thaliana]
gi|89111918|gb|ABD60731.1| At1g59940 [Arabidopsis thaliana]
gi|110737841|dbj|BAF00859.1| hypothetical protein [Arabidopsis thaliana]
gi|332195521|gb|AEE33642.1| two-component response regulator ARR3 [Arabidopsis thaliana]
Length = 231
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/148 (60%), Positives = 116/148 (78%), Gaps = 5/148 (3%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
Q HVLAVDDS++DR +IERLL+ +S +VTAVDSG +ALEFLGL ++ ++V+LI
Sbjct: 32 QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLI 91
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITDYCMPGMTGY+LL+KIKES S K++PVVIMSSEN+ +RI+RCLEEGAE+F LKPV+LA
Sbjct: 92 ITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLA 151
Query: 128 DVNKLKPHLMKGISKEIKEPNNINNKRK 155
DV +L+ +L + + + NKRK
Sbjct: 152 DVKRLRSYLTRDVKVAAE-----GNKRK 174
>gi|255540813|ref|XP_002511471.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223550586|gb|EEF52073.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 221
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/147 (61%), Positives = 118/147 (80%), Gaps = 1/147 (0%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS++DRK+IERLLK SS +VTAVDSG +AL++LGL E ++VNLI
Sbjct: 26 ELHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGTRALQYLGLDGEKSSVGFNDLKVNLI 85
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+TDY MPGMTGY+LL+KIKES++ ++IPVVIMSSENI +RI+RCLEEGAEEF +KPV+L+
Sbjct: 86 MTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILTRIDRCLEEGAEEFIVKPVKLS 145
Query: 128 DVNKLKPHLMKGISKEIKEPNNINNKR 154
DV +LK +M+G E KE +I ++
Sbjct: 146 DVKRLKNFVMRGEGDE-KEKRSILKRK 171
>gi|255558348|ref|XP_002520201.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223540693|gb|EEF42256.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 258
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 130/166 (78%), Gaps = 16/166 (9%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS++DRK+IERLLK +S +VTAVDSG +AL+FLGL +E++ T+ Q ++V+LI
Sbjct: 28 EVHVLAVDDSLVDRKVIERLLKITSCKVTAVDSGRRALQFLGL-DEEKSTSIQGLKVDLI 86
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITDYCMPGMTGY+LL+KIKES++ ++IPVVIMSSEN+ +RI+RCLEEGAE+F +KPV+L+
Sbjct: 87 ITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVMARIDRCLEEGAEDFLVKPVKLS 146
Query: 128 DVNKLKPHLMKGISKEIK-----EPNNIN-------NKRKGLEEID 161
DV +++ ++ ++E+K +N N NKRK + D
Sbjct: 147 DVKRIRDYM---TARELKLKSQQTSHNFNNSTGNNVNKRKSRDSFD 189
>gi|302141801|emb|CBI19004.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 125/184 (67%), Gaps = 32/184 (17%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLN------------- 52
+ FHVLAVDDS+IDRKL+E+LL SSY VT V+SG+KALE+LGLL+
Sbjct: 15 EQHFHVLAVDDSLIDRKLLEKLLTVSSYHVTCVESGDKALEYLGLLDGRDNDTTSSSSSS 74
Query: 53 ----------------EDEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPV 96
+ Q Q ++VNLI+TDYCMPGM+GYDLL+++K S S KD+PV
Sbjct: 75 SSSSSSSSSSSSSSSAKPSQQEMQGLKVNLIMTDYCMPGMSGYDLLKRVKGS-SWKDVPV 133
Query: 97 VIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRKG 156
V+MSSEN+PSRIN CLE GAE+F LKPVQL+D+ KL+PHL+K +S+ E NIN+ +
Sbjct: 134 VVMSSENVPSRINMCLEGGAEDFLLKPVQLSDLEKLQPHLLKSLSQYPCE--NINSSNED 191
Query: 157 LEEI 160
E I
Sbjct: 192 DENI 195
>gi|297837533|ref|XP_002886648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332489|gb|EFH62907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/148 (61%), Positives = 119/148 (80%), Gaps = 5/148 (3%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
Q HVLAVDDS++DR +IERLL+ +S +VTAVDSG +ALEFLGL ++ ++V+LI
Sbjct: 32 QVHVLAVDDSLLDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDKKAAVEFDRLKVDLI 91
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITDYCMPGMTGY+LL+KIKES S K++PVVIMSSEN+ +RI+RCLEEGAE+F LKPV+LA
Sbjct: 92 ITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVITRIDRCLEEGAEDFLLKPVKLA 151
Query: 128 DVNKLKPHLMKGISKEIKEPNNINNKRK 155
DV +L+ +L +K++K + NKRK
Sbjct: 152 DVKRLRNYL----TKDVKVAAD-GNKRK 174
>gi|148608693|gb|ABQ95670.1| type A response regulator, partial [Malus x domestica]
Length = 194
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 88/144 (61%), Positives = 114/144 (79%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HV AVDDS +DRK+IERLLK SS +VTAVDSG +ALE+LGL E ++VNLIIT
Sbjct: 1 HVFAVDDSHVDRKVIERLLKISSCKVTAVDSGTRALEYLGLDGEKSSVGFDNMKVNLIIT 60
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MPGMTGY+LL+KIKES++ +++PVVIMSSENI +RI+RCLEEGAEE+ +KPV+L+DV
Sbjct: 61 DYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILTRIDRCLEEGAEEYIVKPVKLSDV 120
Query: 130 NKLKPHLMKGISKEIKEPNNINNK 153
N+LK +M G ++ E I+ +
Sbjct: 121 NRLKNFMMGGGERKETEEKKIHKR 144
>gi|148608690|gb|ABQ95669.1| response regulator, partial [Malus x domestica]
Length = 209
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 116/153 (75%), Gaps = 1/153 (0%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS-QVIQVNLII 68
HVLAVDDS++DRK+IERLLK SS +VT VDSG +AL+FLGL E T ++V+LII
Sbjct: 1 HVLAVDDSLVDRKVIERLLKISSCRVTTVDSGRRALQFLGLDEEKSSTAGFDGLKVDLII 60
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TDYCMPGMTGY+LL+KIKES++ K PVVIMSSEN+ +RI+RCLEEGAE+F +KPV+LAD
Sbjct: 61 TDYCMPGMTGYELLKKIKESSTFKATPVVIMSSENVLARIDRCLEEGAEDFIVKPVKLAD 120
Query: 129 VNKLKPHLMKGISKEIKEPNNINNKRKGLEEID 161
V +LK ++ ++E NKRK E D
Sbjct: 121 VKRLKDYMTTARDVGVEESGGGMNKRKLREPCD 153
>gi|297850294|ref|XP_002893028.1| hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp.
lyrata]
gi|297338870|gb|EFH69287.1| hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp.
lyrata]
Length = 209
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 91/159 (57%), Positives = 125/159 (78%), Gaps = 1/159 (0%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
VT + HVLAVDDSI+DRK+IERLL+ SS +VT V+SG +AL++LGL +N + ++
Sbjct: 19 VTTPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLK 78
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
VNLI+TDY MPG+TGYDLL+KIKES++ +++PVVIMSSENI RI CL+EGAEEF LKP
Sbjct: 79 VNLIVTDYSMPGLTGYDLLKKIKESSAFREVPVVIMSSENILPRIEECLKEGAEEFLLKP 138
Query: 124 VQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDS 162
V+LADV ++K ++K ++E K ++ +NKRK E+ D+
Sbjct: 139 VKLADVKRIKQLILKNEAEECKTLSH-SNKRKLQEDCDT 176
>gi|148608687|gb|ABQ95668.1| response regulator, partial [Malus x domestica]
Length = 212
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 116/153 (75%), Gaps = 1/153 (0%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS-QVIQVNLII 68
HVLAVDDS++DRK+IERLLK SS +VT VDSG +AL+FLGL E T ++V+LII
Sbjct: 1 HVLAVDDSLVDRKVIERLLKISSCRVTTVDSGRRALQFLGLDEEKSSTAGFDGLKVDLII 60
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TDYCMPGMTGY+LL+KIKES++ K PVVIMSSEN+ +RI+RCLEEGAE+F +KPV+LAD
Sbjct: 61 TDYCMPGMTGYELLKKIKESSTFKATPVVIMSSENVLARIDRCLEEGAEDFIVKPVKLAD 120
Query: 129 VNKLKPHLMKGISKEIKEPNNINNKRKGLEEID 161
V +LK ++ ++E NKRK E D
Sbjct: 121 VKRLKDYMTTARDVGVEESGGGMNKRKLREPCD 153
>gi|147768948|emb|CAN69259.1| hypothetical protein VITISV_026384 [Vitis vinifera]
Length = 210
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/152 (57%), Positives = 120/152 (78%), Gaps = 1/152 (0%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
++ + HVLAVDDS++DRK+IERLLK SS +VTAVDSG +AL+FLGL E ++V
Sbjct: 15 SEEEAHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGRRALQFLGLDEEKNSAGLDGLKV 74
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+LIITDYCMPGMTGY+LL+KIKES++ ++ PVVIMSSENI +RI+RCLEEGAE+F +KPV
Sbjct: 75 DLIITDYCMPGMTGYELLKKIKESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPV 134
Query: 125 QLADVNKLKPHLMKGISKEIKEPNNINNKRKG 156
+L+DV +LK ++ + ++ E IN ++ G
Sbjct: 135 KLSDVKRLKDYMTRE-DRDGNEGRGINKRKLG 165
>gi|359492520|ref|XP_002284504.2| PREDICTED: two-component response regulator ARR9-like [Vitis
vinifera]
Length = 240
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 125/182 (68%), Gaps = 30/182 (16%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLN------------- 52
+ FHVLAVDDS+IDRKL+E+LL SSY VT V+SG+KALE+LGLL+
Sbjct: 25 EQHFHVLAVDDSLIDRKLLEKLLTVSSYHVTCVESGDKALEYLGLLDGRDNDTTSSSSSS 84
Query: 53 --------------EDEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVI 98
+ + + ++VNLI+TDYCMPGM+GYDLL+++K S S KD+PVV+
Sbjct: 85 SSSSSSSSSSSSSSSAKPSQQEGLKVNLIMTDYCMPGMSGYDLLKRVKGS-SWKDVPVVV 143
Query: 99 MSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLE 158
MSSEN+PSRIN CLE GAE+F LKPVQL+D+ KL+PHL+K +S+ E NIN+ + E
Sbjct: 144 MSSENVPSRINMCLEGGAEDFLLKPVQLSDLEKLQPHLLKSLSQYPCE--NINSSNEDDE 201
Query: 159 EI 160
I
Sbjct: 202 NI 203
>gi|296086487|emb|CBI32076.3| unnamed protein product [Vitis vinifera]
Length = 221
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/152 (57%), Positives = 120/152 (78%), Gaps = 1/152 (0%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
++ + HVLAVDDS++DRK+IERLLK SS +VTAVDSG +AL+FLGL E ++V
Sbjct: 26 SEEEAHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGRRALQFLGLDEEKNSAGLDGLKV 85
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+LIITDYCMPGMTGY+LL+KIKES++ ++ PVVIMSSENI +RI+RCLEEGAE+F +KPV
Sbjct: 86 DLIITDYCMPGMTGYELLKKIKESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPV 145
Query: 125 QLADVNKLKPHLMKGISKEIKEPNNINNKRKG 156
+L+DV +LK ++ + ++ E IN ++ G
Sbjct: 146 KLSDVKRLKDYMTRE-DRDGNEGRGINKRKLG 176
>gi|356562781|ref|XP_003549647.1| PREDICTED: two-component response regulator ARR5-like isoform 2
[Glycine max]
Length = 213
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 120/154 (77%), Gaps = 10/154 (6%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS-------Q 60
+ HVLAVDDS++DRK+IERLLK SS +VT V+SG +AL++LGL E+ Q
Sbjct: 25 ELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLEGENGSLGCLFDWLWLQ 84
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
++VNLI+TDY MPGMTGY+LL+KIKES+ ++IPVVIMSSEN+ +RI+RCLEEGAE+F
Sbjct: 85 SVKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFL 144
Query: 121 LKPVQLADVNKLKPHLMKGISKEIKEPNNINNKR 154
LKPV+L+DV +LK +MKG ++KE I++KR
Sbjct: 145 LKPVKLSDVRRLKDFIMKG---KVKEGEKISHKR 175
>gi|225457164|ref|XP_002283787.1| PREDICTED: two-component response regulator ARR5-like [Vitis
vinifera]
Length = 222
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/149 (61%), Positives = 117/149 (78%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S+ HVLAVDDS +DRK+IERLLK SS +VTAV+SG +AL+FLGL E+ ++VNL
Sbjct: 27 SELHVLAVDDSHVDRKVIERLLKISSCKVTAVESGTRALQFLGLDGEENSVGFDGLKVNL 86
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
I+TDY MPGMTGY+LL+KIKES + + IPVVIMSSENI +RI+RCLEEGAEEF +KPV+L
Sbjct: 87 IMTDYSMPGMTGYELLKKIKESKAFRKIPVVIMSSENILTRIDRCLEEGAEEFIVKPVKL 146
Query: 127 ADVNKLKPHLMKGISKEIKEPNNINNKRK 155
ADV +L+ +M+G + + N+KRK
Sbjct: 147 ADVRRLRDFIMRGEEEGEENRKKGNHKRK 175
>gi|297819426|ref|XP_002877596.1| hypothetical protein ARALYDRAFT_906046 [Arabidopsis lyrata subsp.
lyrata]
gi|297323434|gb|EFH53855.1| hypothetical protein ARALYDRAFT_906046 [Arabidopsis lyrata subsp.
lyrata]
Length = 183
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 115/147 (78%), Gaps = 3/147 (2%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
HVLAVDDS++DRK IERLL+ SS +VT VDS +AL++LGL E+ + +++NLI+
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENSSVGFEDLKINLIM 84
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TDY MPGMTGY+LL+KIKES++ ++IPVVIMSSENI RI+RCLEEGAE+F LKPV+LAD
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLAD 144
Query: 129 VNKLKPHLMKGISKEIKEPNNINNKRK 155
V +L+ LMK + K NI +KR+
Sbjct: 145 VKRLRDSLMKAEERAFK---NIMHKRE 168
>gi|357486271|ref|XP_003613423.1| Two-component response regulator ARR3 [Medicago truncatula]
gi|355514758|gb|AES96381.1| Two-component response regulator ARR3 [Medicago truncatula]
Length = 237
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/162 (57%), Positives = 122/162 (75%), Gaps = 11/162 (6%)
Query: 6 DSQ-FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV--- 61
DSQ HVLAVDDS++DRK+IERLLK S+ +VTAVDSG +AL+FLGL++E E + S
Sbjct: 12 DSQEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLVDEKETSESDAFVP 71
Query: 62 -IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
++V+L+ITDYCMPGMTGY+LL+KIKES + + IPVVIMSSENI RI+RCLEEGAE+F
Sbjct: 72 GLKVDLVITDYCMPGMTGYELLKKIKESTTFRAIPVVIMSSENILPRIDRCLEEGAEDFI 131
Query: 121 LKPVQLADVNKLKPHL------MKGISKEIKEPNNINNKRKG 156
+KPV+L+DV +LK ++ + E+ NN+ N G
Sbjct: 132 VKPVKLSDVKRLKGYMTTKEVNVGSQDTEVIVTNNVGNDNDG 173
>gi|356515915|ref|XP_003526642.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 232
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/150 (58%), Positives = 116/150 (77%), Gaps = 18/150 (12%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNE-------------- 53
FHVLAVDDS+IDRKL+ERLL+ SS +VT VDSG+KAL++LGL++E
Sbjct: 22 HFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTTLESESS 81
Query: 54 ---DEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
+ + I+VNLI+TDYCMPGM+GYDLL+++K S S KD+PVVIMSSEN+PSRI+
Sbjct: 82 HPPPQPLQQEGIKVNLIMTDYCMPGMSGYDLLKRVKGS-SWKDVPVVIMSSENVPSRISM 140
Query: 111 CLEEGAEEFFLKPVQLADVNKLKPHLMKGI 140
CLEEGA+EF LKP+QL+D++KL+P+ +K +
Sbjct: 141 CLEEGAQEFLLKPLQLSDLDKLQPYFLKSL 170
>gi|224102495|ref|XP_002312699.1| type-a response regulator [Populus trichocarpa]
gi|222852519|gb|EEE90066.1| type-a response regulator [Populus trichocarpa]
Length = 247
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 125/169 (73%), Gaps = 14/169 (8%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ--------- 56
+ + HVLAVDDS +DRK+IERLLK SS +VTAVDSG AL+ LGLL+++E+
Sbjct: 31 EEEVHVLAVDDSFVDRKVIERLLKISSCKVTAVDSGWGALKLLGLLDDEEEDKSSSSSSS 90
Query: 57 ---TNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLE 113
+ ++V+LIITDYCMPGMTGY+LL+KIKES+S ++IPVVIMSSEN+ +RI+RCLE
Sbjct: 91 SSSAGFEGLKVDLIITDYCMPGMTGYELLKKIKESSSFREIPVVIMSSENVMARIDRCLE 150
Query: 114 EGAEEFFLKPVQLADVNKLKPHLMKGIS-KEIKEPNNINNKRKGLEEID 161
EGAEEF KPV+L+DV +L+ + M + ++ +N+ NKRK E D
Sbjct: 151 EGAEEFIAKPVKLSDVKRLRDYYMATREIRSVQSSSNV-NKRKLQESFD 198
>gi|297733851|emb|CBI15098.3| unnamed protein product [Vitis vinifera]
Length = 296
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/149 (61%), Positives = 117/149 (78%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S+ HVLAVDDS +DRK+IERLLK SS +VTAV+SG +AL+FLGL E+ ++VNL
Sbjct: 101 SELHVLAVDDSHVDRKVIERLLKISSCKVTAVESGTRALQFLGLDGEENSVGFDGLKVNL 160
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
I+TDY MPGMTGY+LL+KIKES + + IPVVIMSSENI +RI+RCLEEGAEEF +KPV+L
Sbjct: 161 IMTDYSMPGMTGYELLKKIKESKAFRKIPVVIMSSENILTRIDRCLEEGAEEFIVKPVKL 220
Query: 127 ADVNKLKPHLMKGISKEIKEPNNINNKRK 155
ADV +L+ +M+G + + N+KRK
Sbjct: 221 ADVRRLRDFIMRGEEEGEENRKKGNHKRK 249
>gi|357477303|ref|XP_003608937.1| Two-component response regulator ARR5 [Medicago truncatula]
gi|355509992|gb|AES91134.1| Two-component response regulator ARR5 [Medicago truncatula]
Length = 214
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/147 (59%), Positives = 116/147 (78%), Gaps = 3/147 (2%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS++DRK+IERLLK SS +VT V+S +AL+FLGL E+ ++VNLI
Sbjct: 25 ELHVLAVDDSLVDRKVIERLLKISSCKVTVVESARRALQFLGLDGENSDVAFDAVKVNLI 84
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+TDY MPGMTGY+LL+KIKES+ ++IPVVIMSSEN+ +RI+RCLEEGAE+F LKPV+L+
Sbjct: 85 MTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLS 144
Query: 128 DVNKLKPHLMKGISKEIKEPNNINNKR 154
DV +LK +M+G E+K+ + KR
Sbjct: 145 DVRRLKDFIMRG---EVKDGEKCSLKR 168
>gi|33330864|gb|AAQ10675.1| type-A response regulator [Catharanthus roseus]
Length = 254
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 110/132 (83%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS++DRK+IERLLK S +VTAV+SG +AL++LGL E ++VNLI
Sbjct: 13 ELHVLAVDDSLVDRKVIERLLKISCCKVTAVESGRRALQYLGLDGEKSTVGFDGLKVNLI 72
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+TDY MPGMTGY+LL+KIK S++LK+IPVVIMSSENI +RI+RCLEEGAEEF +KPV+L+
Sbjct: 73 LTDYSMPGMTGYELLKKIKGSSTLKEIPVVIMSSENILTRIDRCLEEGAEEFLVKPVKLS 132
Query: 128 DVNKLKPHLMKG 139
DV ++K ++KG
Sbjct: 133 DVKRIKDFVLKG 144
>gi|357496037|ref|XP_003618307.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355493322|gb|AES74525.1| Two-component response regulator ARR9 [Medicago truncatula]
Length = 207
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 118/202 (58%), Gaps = 53/202 (26%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
+ M ++QFHVLAVDDSIIDR LIERLLKTSS+ VT +DS +KAL+FLGL+ +
Sbjct: 3 ISMAAETQFHVLAVDDSIIDRMLIERLLKTSSFHVTTMDSASKALKFLGLVEDVASEVHG 62
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKES-------------------------------- 88
+ VNLII DYCMPGMTGYDLLRKIK +
Sbjct: 63 DVDVNLIIADYCMPGMTGYDLLRKIKGARKVNLGRLKLKIATKSKLRRLGRVVFLGAKIT 122
Query: 89 --------ASLKDIPVVIMSSENIPSRIN-------------RCLEEGAEEFFLKPVQLA 127
+ KDIPVVIMSSEN+ SRI+ +C EEGAEEFFLKPVQ +
Sbjct: 123 TLGNLEGIQTFKDIPVVIMSSENVSSRISSLTYYGLIVCNCIKCFEEGAEEFFLKPVQQS 182
Query: 128 DVNKLKPHLMKGISKEIKEPNN 149
DVNKLKPHL+K KE +E
Sbjct: 183 DVNKLKPHLLKSRVKEEQEQTT 204
>gi|255646817|gb|ACU23880.1| unknown [Glycine max]
Length = 235
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 117/147 (79%), Gaps = 18/147 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS----------- 59
VLAVDDS+IDRKL+ERLL+ SS +VT VDSG+KAL++LGL++E + T+S
Sbjct: 26 VLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTPLESESSHPP 85
Query: 60 ------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLE 113
+ I+VNLI+TDYCMPGM+GYDLL+++K S S KD+PVVIMSSEN+PSRI+ CLE
Sbjct: 86 PQPLQREGIKVNLIMTDYCMPGMSGYDLLKRVKGS-SWKDVPVVIMSSENVPSRISMCLE 144
Query: 114 EGAEEFFLKPVQLADVNKLKPHLMKGI 140
EGAEEF LKP+QL+D++KL+P+ +K +
Sbjct: 145 EGAEEFLLKPLQLSDLDKLQPYFLKSV 171
>gi|388511259|gb|AFK43691.1| unknown [Lotus japonicus]
Length = 224
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 118/147 (80%), Gaps = 15/147 (10%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS-------- 59
FHVLAVDDS+IDRKL+ERLL+ SS +VT VDSG+KAL++LGL+++ + T+S
Sbjct: 21 HFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDLDNTSSASLESPIS 80
Query: 60 --QV----IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLE 113
QV I+VNLI+TD+CMPGM+GYDLL+++K S S KD+PVV+MSSEN+PSRI+ CLE
Sbjct: 81 PQQVEQEGIKVNLIMTDFCMPGMSGYDLLKRVKGS-SWKDVPVVVMSSENVPSRISMCLE 139
Query: 114 EGAEEFFLKPVQLADVNKLKPHLMKGI 140
EGAE+F LKP+QL+D+ KL+P+ K +
Sbjct: 140 EGAEKFLLKPLQLSDLEKLQPYFPKSL 166
>gi|309951226|emb|CBX43983.1| putative A-type response regulator 1b [Populus x canadensis]
Length = 257
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 86/147 (58%), Positives = 119/147 (80%), Gaps = 10/147 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ-------TNSQVI 62
HVLAVDDS++DRK+IERLLK SS +VTAVDSG +AL+ LGLL+E+++ V+
Sbjct: 35 HVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLDEEDKSSSSSSSAGFDVL 94
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+V+LIITDYCMPGMTGY+LL+KIKES + ++IPVVIMSSEN+ +RI+RCLEEGAE+F +K
Sbjct: 95 KVDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSENVVARIDRCLEEGAEDFIVK 154
Query: 123 PVQLADVNKLKPHLMKGISKEIKEPNN 149
PV+L+DV +++ ++ S+E++ N
Sbjct: 155 PVKLSDVKRIRDYMA---SREVRSVQN 178
>gi|388507854|gb|AFK41993.1| unknown [Lotus japonicus]
Length = 209
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 129/171 (75%), Gaps = 13/171 (7%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV----IQ 63
+ HVLAVDDS++DRK+IERLLK SS +VT VDSG +AL++LGL D + NS + ++
Sbjct: 19 ELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGL---DGEENSSIGFDGVK 75
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
VNLI+TDY MPGMTGY+LL+KIKES++ ++IPVV+MSSENI +RI+RCLEEGAE+F LKP
Sbjct: 76 VNLIMTDYSMPGMTGYELLKKIKESSAFREIPVVVMSSENILTRIDRCLEEGAEDFLLKP 135
Query: 124 VQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTI 174
V+L+DV +L+ +M G E+K+ ++KR ++ S R L++T
Sbjct: 136 VKLSDVRRLRDFIMSG---EVKKGEKRSHKRNRSDDCSSC---RPSLSNTF 180
>gi|15221927|ref|NP_173339.1| two-component response regulator ARR7 [Arabidopsis thaliana]
gi|51316125|sp|Q9ZWS7.1|ARR7_ARATH RecName: Full=Two-component response regulator ARR7
gi|8778291|gb|AAF79300.1|AC068602_23 F14D16.20 [Arabidopsis thaliana]
gi|3953603|dbj|BAA34729.1| response regulator 7 [Arabidopsis thaliana]
gi|88193788|gb|ABD42983.1| At1g19050 [Arabidopsis thaliana]
gi|332191674|gb|AEE29795.1| two-component response regulator ARR7 [Arabidopsis thaliana]
Length = 206
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/152 (57%), Positives = 121/152 (79%), Gaps = 1/152 (0%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
VT + HVLAVDDSI+DRK+IERLL+ SS +VT V+SG +AL++LGL +N + ++
Sbjct: 19 VTTPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLK 78
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
VNLI+TDY MPG++GYDLL+KIKES++ +++PVVIMSSENI RI CL+EGAEEF LKP
Sbjct: 79 VNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKP 138
Query: 124 VQLADVNKLKPHLMKGISKEIKEPNNINNKRK 155
V+LADV ++K +M+ ++E K ++ +NKRK
Sbjct: 139 VKLADVKRIKQLIMRNEAEECKILSH-SNKRK 169
>gi|15228338|ref|NP_190393.1| two-component response regulator ARR5 [Arabidopsis thaliana]
gi|51316111|sp|Q9SB04.2|ARR5_ARATH RecName: Full=Two-component response regulator ARR5; AltName:
Full=Response reactor 2
gi|3273198|dbj|BAA31144.1| responce reactor2 [Arabidopsis thaliana]
gi|4678318|emb|CAB41129.1| responce reactor2 [Arabidopsis thaliana]
gi|18252911|gb|AAL62382.1| response reactor 2 (ATRR2) [Arabidopsis thaliana]
gi|21389637|gb|AAM48017.1| response reactor 2 (ATRR2) [Arabidopsis thaliana]
gi|110741132|dbj|BAE98659.1| response reactor 2 [Arabidopsis thaliana]
gi|332644847|gb|AEE78368.1| two-component response regulator ARR5 [Arabidopsis thaliana]
Length = 184
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 117/151 (77%), Gaps = 10/151 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV----IQV 64
HVLAVDDS++DRK IERLL+ SS +VT VDS +AL++LGL D + NS V +++
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL---DGENNSSVGFEDLKI 81
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
NLI+TDY MPGMTGY+LL+KIKES++ ++IPVVIMSSENI RI+RCLEEGAE+F LKPV
Sbjct: 82 NLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPV 141
Query: 125 QLADVNKLKPHLMKGISKEIKEPNNINNKRK 155
+LADV +L+ LMK + K NI +KR+
Sbjct: 142 KLADVKRLRDSLMKAEERAFK---NIMHKRE 169
>gi|309951224|emb|CBX43982.1| putative A-type response regulator 1a [Populus x canadensis]
Length = 255
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/149 (57%), Positives = 119/149 (79%), Gaps = 12/149 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ---------TNSQ 60
HVLAVDDS++DRK+IERLLK SS +VTAVDSG +AL+ LGLL+E+++
Sbjct: 35 HVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLDEEDKSSSSSSSSSAGFD 94
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
V++V+LIITDYCMPGMTGY+LL+KIKES + ++IPVVIMSSEN+ +RI+RCLEEGAE+F
Sbjct: 95 VLKVDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSENVVARIDRCLEEGAEDFI 154
Query: 121 LKPVQLADVNKLKPHLMKGISKEIKEPNN 149
+KPV+L+DV +++ ++ S+E++ N
Sbjct: 155 VKPVKLSDVKRIRDYMA---SREVRSVQN 180
>gi|224102663|ref|XP_002312769.1| type-a response regulator [Populus trichocarpa]
gi|222852589|gb|EEE90136.1| type-a response regulator [Populus trichocarpa]
Length = 258
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/149 (58%), Positives = 122/149 (81%), Gaps = 12/149 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ--------- 60
HVLAVDDS++DRK+IERLLK SS +VTAVDSG +AL+ LGLL+E+++++S
Sbjct: 35 HVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLDEEDKSSSSSSSSSAGFD 94
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
V++V+LIITDYCMPGMTGY+LL+KIKES + ++IPVVIMSSEN+ +RI+RCLEEGAE+F
Sbjct: 95 VLKVDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSENVVARIDRCLEEGAEDFI 154
Query: 121 LKPVQLADVNKLKPHLMKGISKEIKEPNN 149
+KPV+L+DV +++ ++ S+E++ N
Sbjct: 155 VKPVKLSDVKRIRDYMA---SREVRSVQN 180
>gi|224135725|ref|XP_002322145.1| type-a arp3-like response regulator [Populus trichocarpa]
gi|222869141|gb|EEF06272.1| type-a arp3-like response regulator [Populus trichocarpa]
Length = 192
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/139 (61%), Positives = 113/139 (81%), Gaps = 1/139 (0%)
Query: 2 GMVTDSQ-FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
G V+ S+ HVLAVDDS +DRK+IERLLK SS +VT V+SG++AL++LGL E
Sbjct: 21 GSVSGSEELHVLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSVGFN 80
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+++NLI+TDY MPGMTGY+LL+KIKES++ ++IPVVIMSSENI +RI+RCLEEGAEE+
Sbjct: 81 DLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILARIDRCLEEGAEEYI 140
Query: 121 LKPVQLADVNKLKPHLMKG 139
LKPV+L+DV ++K +M G
Sbjct: 141 LKPVKLSDVKRIKDVIMGG 159
>gi|3323581|gb|AAC26635.1| two-component response regulator homolog [Arabidopsis thaliana]
Length = 184
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 116/151 (76%), Gaps = 10/151 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV----IQV 64
HVLAVDDS++DRK IERLL+ SS +VT VDS +AL++LGL D + NS V +++
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL---DGENNSSVGFEDLKI 81
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
NLI+TDY MPGMTGY+LL+KIKES++ ++IPVVIMSSENI RI+RCLEEGAE+F LKPV
Sbjct: 82 NLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPV 141
Query: 125 QLADVNKLKPHLMKGISKEIKEPNNINNKRK 155
+LADV +L+ LMK K NI +KR+
Sbjct: 142 KLADVKRLRDSLMKAEEGAFK---NIMHKRE 169
>gi|3953599|dbj|BAA34727.1| response regulator 5 [Arabidopsis thaliana]
Length = 184
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/151 (59%), Positives = 117/151 (77%), Gaps = 10/151 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV----IQV 64
HVLAVDDS++DRK IERLL+ SS +VT VDS +AL++LGL D + NS V +++
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL---DGENNSSVGFEDLKI 81
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
NLI+TDY MPGMTGY+LL+KIKES++ ++IPVVIMSSENI RI+RCLEEGAE+F LKPV
Sbjct: 82 NLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPV 141
Query: 125 QLADVNKLKPHLMKGISKEIKEPNNINNKRK 155
+LADV +L+ LMK + K +I +KR+
Sbjct: 142 KLADVKRLRDSLMKAEERAFK---DIMHKRE 169
>gi|388505720|gb|AFK40926.1| unknown [Lotus japonicus]
Length = 224
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/147 (59%), Positives = 117/147 (79%), Gaps = 15/147 (10%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS-------- 59
FHVLAVDDS+IDRKL+ERLL+ SS +VT VDSG+KAL++LGL+++ + T+S
Sbjct: 21 HFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDLDNTSSASLESPIS 80
Query: 60 --QV----IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLE 113
QV I+VNLI+TD+CMPG +GYDLL+++K S S KD+PVV+MSSEN+PSRI+ CLE
Sbjct: 81 PQQVEQEGIKVNLIMTDFCMPGKSGYDLLKRVKGS-SWKDVPVVVMSSENVPSRISMCLE 139
Query: 114 EGAEEFFLKPVQLADVNKLKPHLMKGI 140
EGAE+F LKP+QL+D+ KL+P+ K +
Sbjct: 140 EGAEKFLLKPLQLSDLEKLQPYFPKSL 166
>gi|224135721|ref|XP_002322144.1| type-a response regulator [Populus trichocarpa]
gi|222869140|gb|EEF06271.1| type-a response regulator [Populus trichocarpa]
gi|309951242|emb|CBX43991.1| putative A-type response regulator 10 [Populus x canadensis]
Length = 223
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/139 (61%), Positives = 113/139 (81%), Gaps = 1/139 (0%)
Query: 2 GMVTDSQ-FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
G V+ S+ HVLAVDDS +DRK+IERLLK SS +VT V+SG++AL++LGL E
Sbjct: 21 GSVSGSEELHVLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSVGFN 80
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+++NLI+TDY MPGMTGY+LL+KIKES++ ++IPVVIMSSENI +RI+RCLEEGAEE+
Sbjct: 81 DLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILARIDRCLEEGAEEYI 140
Query: 121 LKPVQLADVNKLKPHLMKG 139
LKPV+L+DV ++K +M G
Sbjct: 141 LKPVKLSDVKRIKDVIMGG 159
>gi|449464160|ref|XP_004149797.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 236
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/143 (60%), Positives = 111/143 (77%), Gaps = 13/143 (9%)
Query: 12 LAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNED------------EQTNS 59
LAVDDS+IDRKL+E+LL SS QVT V+SG+KAL +LGLL+ D + +
Sbjct: 23 LAVDDSLIDRKLLEKLLTISSCQVTCVESGDKALRYLGLLDHDLDPFSSSSFSSSQLSQH 82
Query: 60 QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEF 119
Q ++VNLI+TD+CMPGM+GYDLL+++K S KDIPVV+MSSEN PSRIN CLEEGAEEF
Sbjct: 83 QEVKVNLIMTDFCMPGMSGYDLLKRLKGSY-WKDIPVVVMSSENEPSRINMCLEEGAEEF 141
Query: 120 FLKPVQLADVNKLKPHLMKGISK 142
LKP+QL+DV KL+PHL K +++
Sbjct: 142 LLKPLQLSDVKKLEPHLQKSLTR 164
>gi|224144996|ref|XP_002325489.1| type-a response regulator [Populus trichocarpa]
gi|222862364|gb|EEE99870.1| type-a response regulator [Populus trichocarpa]
Length = 154
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 86/129 (66%), Positives = 109/129 (84%), Gaps = 1/129 (0%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT-NSQVIQVNLII 68
HVLAVDDS++DRKL+ERLLK SS +VT ++G +ALE+LGL +E + V +VNLII
Sbjct: 22 HVLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYLGLGDEKRTSLEDNVSKVNLII 81
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TDYCMPGMTGY+LL+KIKES+ LK+IPVVIMSSENIP+RIN+CLEEGA+ F LKP++ +D
Sbjct: 82 TDYCMPGMTGYELLKKIKESSMLKEIPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSD 141
Query: 129 VNKLKPHLM 137
V KL+ +LM
Sbjct: 142 VVKLRCNLM 150
>gi|351721065|ref|NP_001237197.1| uncharacterized protein LOC100527518 [Glycine max]
gi|255632528|gb|ACU16614.1| unknown [Glycine max]
Length = 211
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/148 (58%), Positives = 117/148 (79%), Gaps = 4/148 (2%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ VLAVDDS++DRK+IERLL+ SS +VT V+SG +AL++LGL + ++VNLI
Sbjct: 25 ELQVLAVDDSLVDRKVIERLLRISSCKVTVVESGTRALQYLGLDGGNSSLGFDSVKVNLI 84
Query: 68 ITDYCMPGMTGYDLLRKIK-ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
+TDY MPGMTGY+LL+KIK ES+ ++IPVVIMSSEN+ +RI+RCLEEGAE+F LKPV+L
Sbjct: 85 MTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKL 144
Query: 127 ADVNKLKPHLMKGISKEIKEPNNINNKR 154
+DV +LK +MKG ++KE I+NKR
Sbjct: 145 SDVRRLKDFIMKG---KVKEGEKISNKR 169
>gi|15222035|ref|NP_177627.1| two-component response regulator ARR15 [Arabidopsis thaliana]
gi|51315904|sp|Q7G8V2.1|ARR15_ARATH RecName: Full=Two-component response regulator ARR15
gi|5882734|gb|AAD55287.1|AC008263_18 Similar to gb|AB008490 response regulator 7 (ARR7) from Arabidopsis
thaliana. EST gb|AA042183 comes from this gene
[Arabidopsis thaliana]
gi|11870065|gb|AAG40611.1|AF305720_1 response regulator 15 [Arabidopsis thaliana]
gi|12323888|gb|AAG51914.1|AC013258_8 putative response regulator (two component phosphotransfer
signaling); 70657-71777 [Arabidopsis thaliana]
gi|332197523|gb|AEE35644.1| two-component response regulator ARR15 [Arabidopsis thaliana]
Length = 206
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 116/147 (78%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS +DRK+IERLLK S+ +VT V+SG +AL++LGL ++ + + ++VNLI
Sbjct: 17 ELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLI 76
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+TDY MPG+TGY+LL+KIKES++L++IPVVIMSSENI RI +C+ EGAEEF LKPV+LA
Sbjct: 77 VTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLA 136
Query: 128 DVNKLKPHLMKGISKEIKEPNNINNKR 154
DV +LK +M+G E + ++ KR
Sbjct: 137 DVKRLKELIMRGGEAEEGKTKKLSPKR 163
>gi|356509391|ref|XP_003523433.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 235
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 86/147 (58%), Positives = 114/147 (77%), Gaps = 18/147 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNE----------------- 53
VLAVDDS+IDRKL+ERLL+ SS +VT VDSG+KAL++LGL++E
Sbjct: 26 VLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTSLESESSHPP 85
Query: 54 DEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLE 113
+ + I+VNLI+TDYCMPGM+GYDLL+++K S S KD+PVVIMSSEN+PSRI+ CLE
Sbjct: 86 PQPLQREGIKVNLIMTDYCMPGMSGYDLLKRVKGS-SWKDVPVVIMSSENVPSRISMCLE 144
Query: 114 EGAEEFFLKPVQLADVNKLKPHLMKGI 140
EGAEEF LKP+QL+D++KL+P+ +K +
Sbjct: 145 EGAEEFLLKPLQLSDLDKLQPYFLKSV 171
>gi|370988689|dbj|BAL43558.1| type-A response regulator [Petunia x hybrida]
Length = 158
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ-TNS 59
MG T + HVLAVDD+++DRKL+ERLLK SS +VT ++G +ALE+LGL + E TN
Sbjct: 15 MGETTADEPHVLAVDDNLVDRKLVERLLKKSSCKVTTAENGLRALEYLGLGGDQEHSTNG 74
Query: 60 QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEF 119
+VN+IITDYCMPGMTGY+LL+KIKES+ LKD+PVVIMSSENIP+RI++C+EEGA+ F
Sbjct: 75 NGSKVNMIITDYCMPGMTGYELLKKIKESSILKDVPVVIMSSENIPTRIDQCMEEGAQMF 134
Query: 120 FLKPVQLADVNKLKPHLM 137
LKP++ +DV +L+ L+
Sbjct: 135 MLKPLKHSDVKRLRCQLI 152
>gi|441415442|dbj|BAM74645.1| type-A response regulator [Torenia fournieri]
Length = 213
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 130/177 (73%), Gaps = 6/177 (3%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV-----I 62
+FHVLAVDDS++DRK+IE+L K SS +VTAV+SG++AL++LGL + N+ V +
Sbjct: 14 EFHVLAVDDSLVDRKVIEKLFKISSCKVTAVESGSRALQYLGLDGDLNDANNSVGSYEGV 73
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
++NLI+TDY MPGMTG++LL+KIK S +L++IPVV+MSSEN+ +RI+RCLEEGAEEF +K
Sbjct: 74 KLNLIVTDYSMPGMTGFELLQKIKGSKALREIPVVVMSSENVLARIDRCLEEGAEEFLVK 133
Query: 123 PVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTIDINND 179
PV+L+DV +L+ ++KG K+ KRK +++D D + ++D + D
Sbjct: 134 PVKLSDVKRLRDFVIKGKMKKTNNEKQRCYKRKS-QQLDDDDSCTDSNSSSLDFDAD 189
>gi|125658123|gb|ABN48988.1| type A response regulator RR1 [Phaseolus vulgaris]
Length = 227
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/166 (57%), Positives = 125/166 (75%), Gaps = 20/166 (12%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ------- 60
+ HVLAVDDS++DRK+IERLLK S+ +VTAVDSG +AL+FLGL DEQ +
Sbjct: 19 EVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGL---DEQRRTSESDGFVP 75
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
++V+LIITDYCMP MTGY+LL+KIKES+ ++IPVVIMSSENI RI+RCLEEGAE+F
Sbjct: 76 SLKVDLIITDYCMPEMTGYELLKKIKESSMFREIPVVIMSSENILPRIDRCLEEGAEDFI 135
Query: 121 LKPVQLADVNKLKPHLMKGISKEIKEPNN-------INNKRKGLEE 159
+KPV+L+DV +LK ++ ++E+K ++ INNKRK EE
Sbjct: 136 VKPVKLSDVKRLKGYMT---TREVKVGSHDRGSGVEINNKRKLEEE 178
>gi|297824003|ref|XP_002879884.1| hypothetical protein ARALYDRAFT_483126 [Arabidopsis lyrata subsp.
lyrata]
gi|297325723|gb|EFH56143.1| hypothetical protein ARALYDRAFT_483126 [Arabidopsis lyrata subsp.
lyrata]
Length = 163
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 113/135 (83%), Gaps = 3/135 (2%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS---QVI 62
D + HVLAVDD++IDRKL+ERLLK SS +VT ++ +ALE+LGL ++++ ++ V+
Sbjct: 25 DEELHVLAVDDNLIDRKLVERLLKISSCKVTTAENAIRALEYLGLGDQNQHIDALTCNVM 84
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+VNLIITDYCMPGMTG++LL+K+KES++L+++PVVIMSSENIP+RIN+CL GA+ F K
Sbjct: 85 KVNLIITDYCMPGMTGFELLKKVKESSNLRELPVVIMSSENIPTRINKCLASGAQMFMQK 144
Query: 123 PVQLADVNKLKPHLM 137
P++L+DV KLK HLM
Sbjct: 145 PLKLSDVEKLKCHLM 159
>gi|309951240|emb|CBX43990.1| putative A-type response regulator 8 [Populus x canadensis]
Length = 154
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/129 (66%), Positives = 108/129 (83%), Gaps = 1/129 (0%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT-NSQVIQVNLII 68
HVLAVDDS++DRKL+ERLLK SS +VT ++G +ALE+LGL +E + V +VNLII
Sbjct: 22 HVLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYLGLGDEKRTSLEDNVSKVNLII 81
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TDYCMPGMTGY+LL+KIKES+ LK IPVVIMSSENIP+RIN+CLEEGA+ F LKP++ +D
Sbjct: 82 TDYCMPGMTGYELLKKIKESSMLKKIPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSD 141
Query: 129 VNKLKPHLM 137
V KL+ +LM
Sbjct: 142 VVKLRCNLM 150
>gi|224146583|ref|XP_002326060.1| type-a response regulator [Populus trichocarpa]
gi|222862935|gb|EEF00442.1| type-a response regulator [Populus trichocarpa]
Length = 151
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 111/133 (83%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
D + HVLAVDDS+IDRK+IERLL S+ +VT ++G +ALE+LGL + ++SQ ++VN
Sbjct: 16 DEKPHVLAVDDSLIDRKVIERLLINSTCRVTTAENGKRALEYLGLADGQHPSHSQDLKVN 75
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
+IITDY MPGMTGY+LL++IKES ++K+IPVV++SSENIP+RIN+C+E GA+EF LKP+Q
Sbjct: 76 MIITDYSMPGMTGYELLKRIKESPTMKEIPVVVVSSENIPTRINQCMEGGAQEFLLKPLQ 135
Query: 126 LADVNKLKPHLMK 138
L+D KL+ H+ K
Sbjct: 136 LSDATKLRCHIKK 148
>gi|441415444|dbj|BAM74646.1| type-A response regulator [Torenia fournieri]
Length = 141
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 110/136 (80%), Gaps = 3/136 (2%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGL---LNEDEQTNSQVI 62
+ Q HVLAVDD++IDR ++E+LLK SS +VT V++G +ALE+LGL N N+
Sbjct: 5 EEQVHVLAVDDNLIDRTIVEKLLKNSSCKVTTVENGRRALEYLGLGDDQNISSDDNAAAS 64
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+VN+IITDYCMPGMTGY+LL+KIKES+ +KD+PVVIMSSEN+P+RIN+CLEEGAE F LK
Sbjct: 65 KVNMIITDYCMPGMTGYELLKKIKESSVMKDVPVVIMSSENVPTRINKCLEEGAEMFMLK 124
Query: 123 PVQLADVNKLKPHLMK 138
P++ +D+ KLK L++
Sbjct: 125 PLKHSDMKKLKCQLLQ 140
>gi|297797275|ref|XP_002866522.1| hypothetical protein ARALYDRAFT_496477 [Arabidopsis lyrata subsp.
lyrata]
gi|297312357|gb|EFH42781.1| hypothetical protein ARALYDRAFT_496477 [Arabidopsis lyrata subsp.
lyrata]
Length = 186
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/130 (63%), Positives = 106/130 (81%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
HVLAVDDS +DRK IERLL+ SS +VT VDS +AL++LGL E++ Q ++VNLI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLGVEEKSVGFQDLKVNLIM 84
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TDY MPGMTGY+LL+KIKES++ + +PVVIMSSENI RI+RCLEEGAE+F LKPV+L+D
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFRQVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
Query: 129 VNKLKPHLMK 138
V +L+ LMK
Sbjct: 145 VERLRDSLMK 154
>gi|18410485|ref|NP_567037.1| two-component response regulator ARR17 [Arabidopsis thaliana]
gi|51316089|sp|Q9FPR6.1|ARR17_ARATH RecName: Full=Two-component response regulator ARR17
gi|11870071|gb|AAG40613.1|AF305722_1 response regulator 17 [Arabidopsis thaliana]
gi|332645994|gb|AEE79515.1| two-component response regulator ARR17 [Arabidopsis thaliana]
Length = 153
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 114/134 (85%), Gaps = 3/134 (2%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS--QVIQ 63
+ + HVLAVDD++IDRKL+ER+LK SS +VT ++G +ALE+LGL + +QT+S V++
Sbjct: 17 EEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGL-GDPQQTDSLTNVMK 75
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
VNLIITDYCMPGMTG++LL+K+KES++LK++PVVI+SSENIP+RIN+CL GA+ F KP
Sbjct: 76 VNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKP 135
Query: 124 VQLADVNKLKPHLM 137
++L+DV KLK HL+
Sbjct: 136 LKLSDVEKLKCHLL 149
>gi|388511879|gb|AFK44001.1| unknown [Medicago truncatula]
Length = 235
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 117/158 (74%), Gaps = 21/158 (13%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS-------- 59
FHVLAVDDS+IDR L+ERLL+ SS +VT VDSG+KAL++LGL N DE +++
Sbjct: 21 HFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGL-NIDEISSTKSSILESS 79
Query: 60 -----QVIQ------VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI 108
Q +Q VNLI+TDYCMPGM+GYDLL+++K S S KD+PVV+MSSEN+PSRI
Sbjct: 80 SPSLPQPLQLQEGNKVNLIMTDYCMPGMSGYDLLKRVKGS-SWKDVPVVVMSSENVPSRI 138
Query: 109 NRCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKE 146
+ CLEEGAEEF +KP+QL+D+ KL+P+ +K + E
Sbjct: 139 SMCLEEGAEEFLMKPLQLSDLQKLQPYFLKSLENSFDE 176
>gi|217075290|gb|ACJ86005.1| unknown [Medicago truncatula]
gi|388493820|gb|AFK34976.1| unknown [Medicago truncatula]
Length = 235
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/152 (57%), Positives = 116/152 (76%), Gaps = 21/152 (13%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS-------- 59
FHVLAVDDS+IDR L+ERLL+ SS +VT VDSG+KAL++LGL N DE +++
Sbjct: 21 HFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGL-NIDEISSTKSSILESS 79
Query: 60 -----QVIQ------VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI 108
Q +Q VNLI+TDYCMPGM+GYDLL+++K S S KD+PVV+MSSEN+PSRI
Sbjct: 80 SPSLPQPLQLQEGNKVNLIMTDYCMPGMSGYDLLKRVKGS-SWKDVPVVVMSSENVPSRI 138
Query: 109 NRCLEEGAEEFFLKPVQLADVNKLKPHLMKGI 140
+ CLEEGAEEF +KP+QL+D+ KL+P+ +K +
Sbjct: 139 SMCLEEGAEEFLMKPLQLSDLQKLQPYFLKSL 170
>gi|15226732|ref|NP_181599.1| two-component response regulator ARR16 [Arabidopsis thaliana]
gi|51316112|sp|Q9SHC2.1|ARR16_ARATH RecName: Full=Two-component response regulator ARR16
gi|11870068|gb|AAG40612.1|AF305721_1 response regulator 16 [Arabidopsis thaliana]
gi|10443140|emb|CAC10396.1| putative type A response regulator [Arabidopsis thaliana]
gi|194708806|gb|ACF88487.1| At2g40670 [Arabidopsis thaliana]
gi|330254768|gb|AEC09862.1| two-component response regulator ARR16 [Arabidopsis thaliana]
Length = 164
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 112/135 (82%), Gaps = 3/135 (2%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS---QVI 62
D + HVLAVDD++IDRKL+ERLLK S +VT ++ +ALE+LGL ++++ ++ V+
Sbjct: 26 DEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVM 85
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+V+LIITDYCMPGMTG++LL+K+KES++L+++PVVIMSSENIP+RIN+CL GA+ F K
Sbjct: 86 KVSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQK 145
Query: 123 PVQLADVNKLKPHLM 137
P++LADV KLK HLM
Sbjct: 146 PLKLADVEKLKCHLM 160
>gi|15242000|ref|NP_201097.1| two-component response regulator ARR6 [Arabidopsis thaliana]
gi|51316124|sp|Q9ZWS6.2|ARR6_ARATH RecName: Full=Two-component response regulator ARR6
gi|3953601|dbj|BAA34728.1| response regulator 6 [Arabidopsis thaliana]
gi|10177470|dbj|BAB10861.1| response regulator 6 [Arabidopsis thaliana]
gi|28466913|gb|AAO44065.1| At5g62920 [Arabidopsis thaliana]
gi|110735683|dbj|BAE99822.1| response regulator 6 [Arabidopsis thaliana]
gi|332010291|gb|AED97674.1| two-component response regulator ARR6 [Arabidopsis thaliana]
Length = 186
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 107/130 (82%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
HVLAVDDS +DRK IERLL+ SS +VT VDS +AL++LGL E++ + ++VNLI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TDY MPGMTGY+LL+KIKES++ +++PVVIMSSENI RI+RCLEEGAE+F LKPV+L+D
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
Query: 129 VNKLKPHLMK 138
V +L+ LMK
Sbjct: 145 VKRLRDSLMK 154
>gi|356501005|ref|XP_003519320.1| PREDICTED: two-component response regulator ARR3-like [Glycine max]
Length = 240
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 129/180 (71%), Gaps = 27/180 (15%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV------ 61
+ HVLAVDDS++DRK+IERLLK S+ +VTAVDSG +AL+FLGL DEQ +
Sbjct: 19 EVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGL---DEQRRTSESDGFVP 75
Query: 62 -IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
++V+LIITDYCMP MTGY+LL+KIKES ++IPVVIMSSENI RI+RCLEEGAE+F
Sbjct: 76 DLKVDLIITDYCMPEMTGYELLKKIKESTMFREIPVVIMSSENILPRIDRCLEEGAEDFI 135
Query: 121 LKPVQLADVNKLKPHL-----MKGISKEIKEPNN-----------INNKRKGLEEIDSAD 164
+KPV+L+DV +LK ++ +K S+E + + INNKRK LEE D++D
Sbjct: 136 VKPVKLSDVKRLKGYMTPKEVIKMRSQEDRRSDGYVNGGDGGVLEINNKRK-LEEQDTSD 194
>gi|449526812|ref|XP_004170407.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 194
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/124 (67%), Positives = 98/124 (79%), Gaps = 15/124 (12%)
Query: 35 VTAVDSGNKALEFLGLLNEDEQT---------------NSQVIQVNLIITDYCMPGMTGY 79
VT VDSG+KALEFLGL+ E + T + Q ++VNLIITDYCMPGMTG+
Sbjct: 3 VTTVDSGSKALEFLGLIQEHQPTNFKSSSNSSFSSPNNHHQEVEVNLIITDYCMPGMTGF 62
Query: 80 DLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMKG 139
DLL+K+KES SL++IPVVIMSSEN+PSRINRCLEEGAEEFFLKPV+L DVNKLKPH+MK
Sbjct: 63 DLLKKVKESTSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLCDVNKLKPHMMKT 122
Query: 140 ISKE 143
KE
Sbjct: 123 KVKE 126
>gi|302755905|ref|XP_002961376.1| type A response regulator [Selaginella moellendorffii]
gi|300170035|gb|EFJ36636.1| type A response regulator [Selaginella moellendorffii]
Length = 220
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 120/168 (71%), Gaps = 5/168 (2%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSS--YQVTAVDSGNKALEFLGLLNEDEQ---TNSQVI 62
Q HVLAVDDS++DR +IERLLKTSS ++VTAVDS +ALE LG+++ S+ I
Sbjct: 50 QIHVLAVDDSLVDRTVIERLLKTSSSSFKVTAVDSALRALEILGIVDGQASPAAAPSEGI 109
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
Q+++IITDYCMP MTGYDLL+++K +SLK+IPVVIMSSEN+ RIN C EEGAE+F +K
Sbjct: 110 QISMIITDYCMPHMTGYDLLKRVKGVSSLKEIPVVIMSSENVEQRINSCYEEGAEDFIIK 169
Query: 123 PVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRL 170
PV+LADV +L + G S E++ KRK + E +S R R+
Sbjct: 170 PVKLADVKRLVSGHLGGKSSEVETLAANTRKRKRVLEDNSPPRLHQRV 217
>gi|370988685|dbj|BAL43556.1| type-A response regulator [Petunia x hybrida]
Length = 258
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/148 (60%), Positives = 113/148 (76%), Gaps = 3/148 (2%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS++DR +IERLLK +S +VT VDSG +AL+FLGL E+ ++V+LI
Sbjct: 24 EVHVLAVDDSLVDRIVIERLLKITSCKVTTVDSGMRALQFLGLDEEESSVRIDGLKVDLI 83
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITDYCMPGMTGYDLL+KIK S S ++IPVVIMSSEN+ +RI+RCLEEGAE+F LKPV+LA
Sbjct: 84 ITDYCMPGMTGYDLLKKIKGS-SFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLA 142
Query: 128 DVNKLKPHLMKGISKEIKEPNNINNKRK 155
DV +LK + + +E NKRK
Sbjct: 143 DVKRLKSFMFSEDRAKTEEKG--MNKRK 168
>gi|297816962|ref|XP_002876364.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322202|gb|EFH52623.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 149
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 112/132 (84%), Gaps = 3/132 (2%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
+ + HVLAVDD++IDRK +ER+LK SS +VT ++G +ALE+LGL + +QTN V++VN
Sbjct: 17 EEELHVLAVDDNLIDRKFLERILKISSCKVTTAENGLRALEYLGL-GDPQQTN--VMKVN 73
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
LIITDYCMPGMTG++LL+K+KES++LK++PVVI+SSENIP+RIN+CL GA+ F KP++
Sbjct: 74 LIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLK 133
Query: 126 LADVNKLKPHLM 137
L+DV KLK HL+
Sbjct: 134 LSDVEKLKCHLL 145
>gi|302798272|ref|XP_002980896.1| hypothetical protein SELMODRAFT_444661 [Selaginella moellendorffii]
gi|300151435|gb|EFJ18081.1| hypothetical protein SELMODRAFT_444661 [Selaginella moellendorffii]
Length = 222
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 120/168 (71%), Gaps = 5/168 (2%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSS--YQVTAVDSGNKALEFLGLLN---EDEQTNSQVI 62
Q HVLAVDDS++DR +IERLLKTSS ++VTAVDS +ALE LG+++ S+ I
Sbjct: 52 QIHVLAVDDSLVDRTVIERLLKTSSSSFKVTAVDSALRALEILGIVDGQASPAAAPSEGI 111
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
Q+++IITDYCMP MTGYDLL+++K +SLK+IPVVIMSSEN+ RIN C EEGAE+F +K
Sbjct: 112 QISMIITDYCMPHMTGYDLLKRVKGVSSLKEIPVVIMSSENVEQRINSCYEEGAEDFIIK 171
Query: 123 PVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRL 170
PV+LADV +L + G S E++ KRK + E +S R R+
Sbjct: 172 PVKLADVKRLVSGHLGGKSSEVETLAANTRKRKRVLEDNSPPRLHQRV 219
>gi|449440724|ref|XP_004138134.1| PREDICTED: two-component response regulator ARR5-like [Cucumis
sativus]
gi|449477360|ref|XP_004155001.1| PREDICTED: two-component response regulator ARR5-like [Cucumis
sativus]
Length = 227
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 112/137 (81%), Gaps = 7/137 (5%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS----QVI 62
+Q HVLAVDDS +DRK+IERLLK+SS +VT V+SG AL++LGL D +TNS +
Sbjct: 28 TQLHVLAVDDSFVDRKVIERLLKSSSCEVTVVESGRSALQYLGL---DGETNSVQFSSAL 84
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+VNLIITDY MP MTGY+LL+KIKES++ ++IPVVIMSSENI +RI+ CL+EGAEEF +K
Sbjct: 85 KVNLIITDYSMPEMTGYELLKKIKESSAFREIPVVIMSSENIMARIDSCLKEGAEEFIVK 144
Query: 123 PVQLADVNKLKPHLMKG 139
PV+L+DV +LK +M+G
Sbjct: 145 PVKLSDVKRLKDFIMEG 161
>gi|312283391|dbj|BAJ34561.1| unnamed protein product [Thellungiella halophila]
Length = 190
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 107/130 (82%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
HVLAVDDS +DRK IERLL+ SS +VT VDS +AL++LGL +++ + ++VNLI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVDEKTVGLEDLKVNLIM 84
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TDY MPGMTGY+LL+KIKES++ KDIPVV+MSSENI RI+RCLEEGAE+F LKPV+L+D
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFKDIPVVVMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
Query: 129 VNKLKPHLMK 138
V +L+ L+K
Sbjct: 145 VRRLRDSLIK 154
>gi|255559713|ref|XP_002520876.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223540007|gb|EEF41585.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 155
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/131 (62%), Positives = 110/131 (83%), Gaps = 1/131 (0%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT-NSQVIQVNL 66
Q HVLAVDD++IDRKL+E+LLK S +VT ++G +ALE+LGL ++D + V +VNL
Sbjct: 21 QPHVLAVDDNLIDRKLVEKLLKNSCCKVTTAENGLRALEYLGLGDDDRNCLENNVSKVNL 80
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
IITDYCMPGMTGY+LL+KIKES+ +K++PVVI+SSENIP+RIN+CLEEGA+ F LKP++L
Sbjct: 81 IITDYCMPGMTGYELLKKIKESSIMKEVPVVIVSSENIPTRINKCLEEGAQMFMLKPLKL 140
Query: 127 ADVNKLKPHLM 137
+DV KL+ +M
Sbjct: 141 SDVKKLRCDIM 151
>gi|351725781|ref|NP_001238384.1| uncharacterized protein LOC100306152 [Glycine max]
gi|255627697|gb|ACU14193.1| unknown [Glycine max]
Length = 201
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 107/132 (81%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS +DRK+IERLLK SS +VT V+SG++AL++LGL E ++VNLI
Sbjct: 20 KLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGLDSVKVNLI 79
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+TDY MPGMTGY+LL+KIKES+ +++PVV+MSSENI +RI+ CLEEGAEEF LKPV+L+
Sbjct: 80 MTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLS 139
Query: 128 DVNKLKPHLMKG 139
DV ++ +M+G
Sbjct: 140 DVKRVTDFIMRG 151
>gi|356516718|ref|XP_003527040.1| PREDICTED: two-component response regulator ARR6-like [Glycine max]
Length = 204
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 106/132 (80%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS +DRK+IERLLK SS +VT V+SG++AL++LGL E + VNLI
Sbjct: 20 KLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGFDSVDVNLI 79
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+TDY MPGMTGY+LL+KIKES+ +++PVV+MSSENI +RI+ CLEEGAEEF LKPV+L+
Sbjct: 80 MTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLS 139
Query: 128 DVNKLKPHLMKG 139
DV ++ +M+G
Sbjct: 140 DVKRVTDFIMRG 151
>gi|359807455|ref|NP_001241393.1| uncharacterized protein LOC100778707 [Glycine max]
gi|255637322|gb|ACU18991.1| unknown [Glycine max]
Length = 146
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 105/128 (82%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDD++IDRKL+E+LL+ SS +VT ++G +ALE LGL + + T + +VN++IT
Sbjct: 18 HVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNTMNGRSKVNMVIT 77
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DYCMPGMTGY+LL+KIKES+ K++PVVIMSSENIP+RIN+CLEEGA+ F LKP++ +DV
Sbjct: 78 DYCMPGMTGYELLKKIKESSVTKEVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSDV 137
Query: 130 NKLKPHLM 137
KL LM
Sbjct: 138 KKLTCQLM 145
>gi|302804879|ref|XP_002984191.1| type A response regulator [Selaginella moellendorffii]
gi|300148040|gb|EFJ14701.1| type A response regulator [Selaginella moellendorffii]
Length = 272
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS +DRK++ERLLK SSY+VT VDS +ALE LG++ I++NLI
Sbjct: 7 EIHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVG-SAPVVINAIKINLI 65
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITDYCMP MTGYDLL+K+KES++LK+IPVVIMSSEN+ RI C+ EGA+EF LKP+++A
Sbjct: 66 ITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERITMCMAEGAKEFILKPLRVA 125
Query: 128 DVNKLKPHLMK 138
DV +L+ H+ +
Sbjct: 126 DVKRLRSHIQR 136
>gi|388492124|gb|AFK34128.1| unknown [Lotus japonicus]
gi|388498306|gb|AFK37219.1| unknown [Lotus japonicus]
Length = 207
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/140 (58%), Positives = 111/140 (79%), Gaps = 1/140 (0%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS +DRK+IERLL+ SS +VT VDSG +AL++LGL E ++VNLI
Sbjct: 19 ELHVLAVDDSHVDRKVIERLLRISSCKVTVVDSGTRALQYLGLDGEKSSIGLDSVKVNLI 78
Query: 68 ITDYCMPGMTGYDLLRKIK-ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
+TDY MPGMTGY+LL+KIK ES+ ++IPVV+MSSENI +RI+ CLEEGAE+F LKPV+L
Sbjct: 79 MTDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSENILTRIDSCLEEGAEDFLLKPVKL 138
Query: 127 ADVNKLKPHLMKGISKEIKE 146
+DV +L +M+G K++++
Sbjct: 139 SDVKRLTDFIMRGGEKKVEQ 158
>gi|297842233|ref|XP_002888998.1| hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp.
lyrata]
gi|297334839|gb|EFH65257.1| hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 108/132 (81%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS +DRK+IERLLK S+ +VT V+SG +AL++LGL + + + ++VNLI
Sbjct: 17 ELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDHGSSGLKDLKVNLI 76
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+TDY MPG+TGY+LL+KIKES++ ++IPVVIMSSENI RI +C+ EGAE+F LKPV+LA
Sbjct: 77 VTDYSMPGLTGYELLKKIKESSAFREIPVVIMSSENIQPRIEQCMIEGAEDFLLKPVKLA 136
Query: 128 DVNKLKPHLMKG 139
DV +LK +M+G
Sbjct: 137 DVKRLKELIMRG 148
>gi|302804881|ref|XP_002984192.1| type A response regulator [Selaginella moellendorffii]
gi|300148041|gb|EFJ14702.1| type A response regulator [Selaginella moellendorffii]
Length = 278
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 107/136 (78%), Gaps = 5/136 (3%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNE-----DEQTNSQVI 62
+ HVLAVDDS +DRK++ERLLK SSY+VT VDS +ALE LG++ + ++ I
Sbjct: 7 EIHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINVSSHLLAI 66
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
++NLIITDYCMP MTGYDLL+K+KES++LK+IPVVIMSSEN+ RI C+ EGA+EF LK
Sbjct: 67 KINLIITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERITMCMAEGAKEFILK 126
Query: 123 PVQLADVNKLKPHLMK 138
P+++ADV +L+ H+ +
Sbjct: 127 PLRVADVKRLRSHIQR 142
>gi|351724591|ref|NP_001236551.1| uncharacterized protein LOC100499827 [Glycine max]
gi|255626955|gb|ACU13822.1| unknown [Glycine max]
Length = 146
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 105/128 (82%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDD++IDRKL+E+LL+ SS +VT ++G +ALE LGL + + + +VN+IIT
Sbjct: 18 HVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNNMNGRSKVNMIIT 77
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DYCMPGMTGY+LL+KIKES+ +K++PVVIMSSENIP+RIN+CLEEGA+ F LKP++ +DV
Sbjct: 78 DYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSDV 137
Query: 130 NKLKPHLM 137
KL LM
Sbjct: 138 RKLTCQLM 145
>gi|356497802|ref|XP_003517746.1| PREDICTED: two-component response regulator ARR3-like [Glycine max]
Length = 244
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 126/183 (68%), Gaps = 29/183 (15%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV------ 61
+ HVLAVDDS++DRK+IERLLK S+ +VTAVDSG +AL+FLGL DEQ +
Sbjct: 19 EVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGL---DEQRRTSESDGFVP 75
Query: 62 -IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
++V+LIITDYCMP MTGY+LL+KIKES ++IPVVIMSSENI RI+RCLEEGAE+F
Sbjct: 76 DLKVDLIITDYCMPEMTGYELLKKIKESTMFREIPVVIMSSENILPRIDRCLEEGAEDFI 135
Query: 121 LKPVQLADVNKLKPHLM-KGISKEIKEPNN------------------INNKRKGLEEID 161
+KPV+L+DV +LK +L K + K + + INN ++ LEE D
Sbjct: 136 VKPVKLSDVKRLKGYLTPKEVIKVDRRSDGYVNGGCKGGDGGGGGGVEINNNKRKLEEQD 195
Query: 162 SAD 164
++D
Sbjct: 196 TSD 198
>gi|334184846|ref|NP_001189722.1| two-component response regulator ARR16 [Arabidopsis thaliana]
gi|330254769|gb|AEC09863.1| two-component response regulator ARR16 [Arabidopsis thaliana]
Length = 165
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 112/136 (82%), Gaps = 4/136 (2%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS---QVI 62
D + HVLAVDD++IDRKL+ERLLK S +VT ++ +ALE+LGL ++++ ++ V+
Sbjct: 26 DEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVM 85
Query: 63 QVNLIITDYCMPGMTGYDLLRKIK-ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
+V+LIITDYCMPGMTG++LL+K+K ES++L+++PVVIMSSENIP+RIN+CL GA+ F
Sbjct: 86 KVSLIITDYCMPGMTGFELLKKVKQESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQ 145
Query: 122 KPVQLADVNKLKPHLM 137
KP++LADV KLK HLM
Sbjct: 146 KPLKLADVEKLKCHLM 161
>gi|225448707|ref|XP_002280746.1| PREDICTED: two-component response regulator ARR17 [Vitis vinifera]
Length = 153
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 111/129 (86%), Gaps = 3/129 (2%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTN--SQVIQVNLI 67
HVLAVDD++IDRKLIE+LLK S +VT ++G +ALE+LGL +++QT+ + V +VNLI
Sbjct: 22 HVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGL-GDNQQTSHKASVSKVNLI 80
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITDYCMPGMTGY+LL+++K+S+ LK++PVVIMSSENIP+RIN+CLEEGA+ F LKP++ +
Sbjct: 81 ITDYCMPGMTGYELLKRVKQSSILKEVPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQS 140
Query: 128 DVNKLKPHL 136
DV KL+ +L
Sbjct: 141 DVKKLRCYL 149
>gi|297736479|emb|CBI25350.3| unnamed protein product [Vitis vinifera]
Length = 141
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 111/129 (86%), Gaps = 3/129 (2%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTN--SQVIQVNLI 67
HVLAVDD++IDRKLIE+LLK S +VT ++G +ALE+LGL +++QT+ + V +VNLI
Sbjct: 10 HVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGL-GDNQQTSHKASVSKVNLI 68
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITDYCMPGMTGY+LL+++K+S+ LK++PVVIMSSENIP+RIN+CLEEGA+ F LKP++ +
Sbjct: 69 ITDYCMPGMTGYELLKRVKQSSILKEVPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQS 128
Query: 128 DVNKLKPHL 136
DV KL+ +L
Sbjct: 129 DVKKLRCYL 137
>gi|357144070|ref|XP_003573159.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 135
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 105/139 (75%), Gaps = 10/139 (7%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
M T + HVLAVDDS++DR +I RLL++S YQVT VDSG +ALE L L E
Sbjct: 1 MSTGPELHVLAVDDSLVDRAIISRLLRSSKYQVTTVDSGKRALEVLSLERE--------- 51
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
V++IITDYCMP MTGY+LL+++KE+A L++IPVVIMSSEN P+RI RCLEEGAEEF +K
Sbjct: 52 -VHMIITDYCMPEMTGYELLKRVKETAELREIPVVIMSSENSPARIRRCLEEGAEEFLIK 110
Query: 123 PVQLADVNKLKPHLMKGIS 141
PV+ +DV++L L+ ++
Sbjct: 111 PVRPSDVSRLCSLLLPTVA 129
>gi|116788845|gb|ABK25022.1| unknown [Picea sitchensis]
Length = 208
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/131 (59%), Positives = 105/131 (80%), Gaps = 3/131 (2%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT--NSQVIQVN 65
+ HVLAVDD +I+RK+IE+LLKT+ ++VT VDS +ALE LG +E++ T S +VN
Sbjct: 32 EMHVLAVDDCLIERKVIEKLLKTNFFKVTTVDSAERALEVLGF-HEEQSTCAASNAFKVN 90
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
+IITDYCMPGMTGYDLL+K++E+ LK+IPVVI+SSEN+P RI CL GA++F +KP++
Sbjct: 91 MIITDYCMPGMTGYDLLKKVQETKCLKEIPVVIISSENVPQRITSCLAGGAKDFIIKPLK 150
Query: 126 LADVNKLKPHL 136
LADV KLK H+
Sbjct: 151 LADVTKLKGHI 161
>gi|302781008|ref|XP_002972278.1| hypothetical protein SELMODRAFT_97144 [Selaginella moellendorffii]
gi|300159745|gb|EFJ26364.1| hypothetical protein SELMODRAFT_97144 [Selaginella moellendorffii]
Length = 293
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 105/150 (70%), Gaps = 19/150 (12%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNE-------------- 53
+ HVLAVDDS +DRK++ERLLK SSY+VT VDS +ALE LG++
Sbjct: 7 EIHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINVSSHLLVH 66
Query: 54 -----DEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI 108
Q I++NLIITDYCMP MTGYDLL+K+KES++LK+IPVVIMSSEN+ RI
Sbjct: 67 FLCFLWLLLLLQAIKINLIITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERI 126
Query: 109 NRCLEEGAEEFFLKPVQLADVNKLKPHLMK 138
C+ EGA+EF LKP+++ADV +L+ H+ +
Sbjct: 127 TMCMAEGAKEFILKPLRVADVKRLRSHIQR 156
>gi|109631204|gb|ABG35778.1| SRR201 [Striga asiatica]
Length = 223
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 119/156 (76%), Gaps = 4/156 (2%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
V + VLAVDDS++DRK+IERLLK S + +V+SG +AL++LGL E + ++
Sbjct: 14 VVAQELCVLAVDDSLVDRKVIERLLKISRCKAISVESGTRALQYLGLDEEKNSSGFDDLK 73
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
VNLI+TDY MPGMTG++LL+KIK SA LK IPVVI+SSENI +RI+RCLEEGAEE+ +KP
Sbjct: 74 VNLIMTDYSMPGMTGFELLQKIKGSAKLKGIPVVILSSENIMTRIDRCLEEGAEEYLVKP 133
Query: 124 VQLADVNKLKPHLMKGISKEIKEPNNINNKRK-GLE 158
V+L+DV +++ +++G E K N++N KRK G+E
Sbjct: 134 VKLSDVERVRDCILRG---EGKTGNSLNPKRKIGVE 166
>gi|118489969|gb|ABK96781.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 248
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 127/171 (74%), Gaps = 17/171 (9%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS------ 59
+ + HVLAVDDS +DRK+IERLLK SS +VTAVDSG AL+ LGLL++DE+ S
Sbjct: 31 EEEVHVLAVDDSFVDRKVIERLLKISSCKVTAVDSGWGALKLLGLLDDDEEDKSSSSSSS 90
Query: 60 -------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL 112
+ ++V+LIITDYCMPGMTGY+LL+KIKES+S ++IPVVIMSSEN+ +RI+RCL
Sbjct: 91 SSSSAGFEGLKVDLIITDYCMPGMTGYELLKKIKESSSFREIPVVIMSSENVMARIDRCL 150
Query: 113 EEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKEPNNIN--NKRKGLEEID 161
EEGAEEF KPV+L+DV +L+ + M ++EI+ + + NKRK E D
Sbjct: 151 EEGAEEFIAKPVKLSDVKRLRDYYMA--TREIRSVQSSSNVNKRKLQESFD 199
>gi|168001998|ref|XP_001753701.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695108|gb|EDQ81453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 132
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 109/132 (82%), Gaps = 4/132 (3%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV-- 61
+++ ++HVLAVDDSIIDRK+IERLLKTSSY+VT V+S +ALE+LG L+E T+ +
Sbjct: 2 MSNPEYHVLAVDDSIIDRKVIERLLKTSSYKVTTVNSALRALEYLG-LSESCSTSVKANK 60
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIK-ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+ VNLI+TDYCMP MTGYDLL+ +K E+++ K++PV++MSSEN +RI RCLEEGA+EF
Sbjct: 61 VTVNLIMTDYCMPEMTGYDLLKIVKAETSAFKELPVIVMSSENDSNRIKRCLEEGAKEFL 120
Query: 121 LKPVQLADVNKL 132
+KPVQ+ DV +L
Sbjct: 121 IKPVQIEDVQRL 132
>gi|357162610|ref|XP_003579464.1| PREDICTED: two-component response regulator ARR5-like [Brachypodium
distachyon]
Length = 163
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 102/129 (79%), Gaps = 8/129 (6%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
V + HVLAVDDS++DR +I ++L++S Y+VT V+S +ALE LGL +
Sbjct: 38 VVVQELHVLAVDDSVVDRAVIAKILRSSKYRVTTVESATRALELLGL--------GLITN 89
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
VN+IITDY MPGMTGY+LL+++KES+ LK+IPVVIMSSEN+P+RINRCLEEGAE+F LKP
Sbjct: 90 VNMIITDYWMPGMTGYELLKRVKESSELKEIPVVIMSSENVPNRINRCLEEGAEDFLLKP 149
Query: 124 VQLADVNKL 132
V+ +DV++L
Sbjct: 150 VRPSDVSRL 158
>gi|147837871|emb|CAN60564.1| hypothetical protein VITISV_013996 [Vitis vinifera]
Length = 154
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 110/130 (84%), Gaps = 4/130 (3%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTN--SQVIQVNLI 67
HVLAVDD++IDRKLIE+LLK S +VT ++G +ALE+LGL +++QT+ + V +VNLI
Sbjct: 22 HVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGL-GDNQQTSHKASVSKVNLI 80
Query: 68 ITDYCMPGMTGYDLLRKIKESAS-LKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
ITDYCMPGMTGY+LL++ K+ +S LK++PVVIMSSENIP+RIN+CLEEGA+ F LKP++
Sbjct: 81 ITDYCMPGMTGYELLKRXKQQSSILKEVPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQ 140
Query: 127 ADVNKLKPHL 136
+DV KL+ +L
Sbjct: 141 SDVKKLRCYL 150
>gi|326531500|dbj|BAJ97754.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 101/126 (80%), Gaps = 8/126 (6%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
++ HVLAVDDS++DR +I ++L++S Y+VT VDS +ALE LGL + VN+
Sbjct: 51 AELHVLAVDDSVVDRAVIAKILRSSKYRVTTVDSATRALELLGL--------GLITDVNM 102
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
IITDY MPGMTGY+LL+++KES+ L++IPVVIMSSEN+P+RI RCLEEGAE+F LKPV+
Sbjct: 103 IITDYWMPGMTGYELLKRVKESSELREIPVVIMSSENVPNRITRCLEEGAEDFLLKPVRP 162
Query: 127 ADVNKL 132
+DV++L
Sbjct: 163 SDVSRL 168
>gi|168029974|ref|XP_001767499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681205|gb|EDQ67634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 104/130 (80%), Gaps = 2/130 (1%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS-QVIQ 63
++S++HVLAVDDSIIDRK+IERLLKTSSY+VT V+S +ALE+LGL + V
Sbjct: 15 SNSEYHVLAVDDSIIDRKVIERLLKTSSYKVTTVNSALRALEYLGLSESCSSSGKPNVRA 74
Query: 64 VNLIITDYCMPGMTGYDLLRKIK-ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
VNLI+TDYCMPGMTGYDLL+ +K E+++ K++PV++MSSEN +RI CL EGAE+F +K
Sbjct: 75 VNLIMTDYCMPGMTGYDLLKIVKAETSAFKELPVIVMSSENDSNRIKSCLAEGAEDFLIK 134
Query: 123 PVQLADVNKL 132
PVQL DV +L
Sbjct: 135 PVQLEDVQRL 144
>gi|309951228|emb|CBX43984.1| putative A-type response regulator 2 [Populus x canadensis]
Length = 251
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 126/173 (72%), Gaps = 18/173 (10%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS------ 59
+ + HVLAVDDS +DRK+IERLLK SS +VTAVDSG AL+ LGLL++DE+ S
Sbjct: 31 EEEVHVLAVDDSFVDRKVIERLLKISSCKVTAVDSGWGALKLLGLLDDDEEDKSSSSSSS 90
Query: 60 ----------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRIN 109
+ ++V+LIITDYCMPGMTGY+LL+KIKES+S ++IPVVIMSSEN+ +RI+
Sbjct: 91 SSSFSSSAGFEGLKVDLIITDYCMPGMTGYELLKKIKESSSFREIPVVIMSSENVMARID 150
Query: 110 RCLEEGAEEFFLKPVQLADVNKLKPHLMKGIS-KEIKEPNNINNKRKGLEEID 161
RCLEEGAEEF KPV+L+DV +L+ + M + ++ +N+ NKRK E D
Sbjct: 151 RCLEEGAEEFIAKPVKLSDVKRLRDYYMATREIRSVQSSSNV-NKRKLQESFD 202
>gi|168002910|ref|XP_001754156.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694710|gb|EDQ81057.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 108/136 (79%), Gaps = 9/136 (6%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS------QV 61
Q+HVLAVDDS ID+++IE+LLKTSSY+VT V+S +ALE LGL D +S Q
Sbjct: 1 QYHVLAVDDSRIDQRVIEKLLKTSSYKVTTVNSALRALELLGL--SDSSPSSIKVPLLQK 58
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIK-ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+ +NLI+TDYCMP MTGYDLL+++K ++++LK+IPVV+MSSEN +RI RCL EGAEEF
Sbjct: 59 LDINLIMTDYCMPEMTGYDLLKRVKADTSALKEIPVVVMSSENDSNRIERCLAEGAEEFI 118
Query: 121 LKPVQLADVNKLKPHL 136
+KPVQ+ADV +L+ H+
Sbjct: 119 IKPVQMADVKRLRGHI 134
>gi|242067106|ref|XP_002454842.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
gi|241934673|gb|EES07818.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
Length = 134
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 103/139 (74%), Gaps = 10/139 (7%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
VT HVLAVDDSI+DR +I RLL++S Y+VT VDSG +ALE L L +
Sbjct: 6 VTPEPPHVLAVDDSIVDRAVISRLLRSSKYRVTTVDSGKRALEVLSLDD----------S 55
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
V++IITDYCMP M+GY+LL+++KESA L++IPVV+MSSEN P+RI RCLEEGAEEF +KP
Sbjct: 56 VHMIITDYCMPEMSGYELLKRVKESAELREIPVVLMSSENSPTRIRRCLEEGAEEFLIKP 115
Query: 124 VQLADVNKLKPHLMKGISK 142
V+ +DV++L L+ +
Sbjct: 116 VRASDVSRLCSRLVSTCRR 134
>gi|255545370|ref|XP_002513745.1| Two-component response regulator ARR9, putative [Ricinus communis]
gi|223546831|gb|EEF48328.1| Two-component response regulator ARR9, putative [Ricinus communis]
Length = 229
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 106/163 (65%), Gaps = 36/163 (22%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS-------- 59
FHVLAVDDS++DRKL+ERLL+ SSYQVT VDSG+KALE+LGLLN E +
Sbjct: 39 HFHVLAVDDSLLDRKLLERLLRVSSYQVTCVDSGDKALEYLGLLNNLENATTASSSSSSF 98
Query: 60 ----------------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSEN 103
+ ++VNLI+TDYCMPGM+GYDLL+++K S KD+PVV+M
Sbjct: 99 SQSAPPPPPPQQQQQQEGMKVNLIMTDYCMPGMSGYDLLKRVKGSP-WKDVPVVVM---- 153
Query: 104 IPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKE 146
CLE GAEEF LKPVQL+DV KL+ HL+K + KE
Sbjct: 154 -------CLEGGAEEFLLKPVQLSDVEKLQTHLLKSLDHSCKE 189
>gi|168002238|ref|XP_001753821.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695228|gb|EDQ81573.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 124
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 104/125 (83%), Gaps = 2/125 (1%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+HVLAVDDS ID+++IERLLKTSSY+VT V+S +AL+ LGL +E +S + +NLI+
Sbjct: 1 YHVLAVDDSSIDQRVIERLLKTSSYRVTTVNSAVRALDVLGL-SESRSASSTRLDINLIM 59
Query: 69 TDYCMPGMTGYDLLRKIK-ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
TDYCMP MTGYDLL+++K ++++LK+IPVV+MSSEN +RI RCL EGAEEF +KPV++A
Sbjct: 60 TDYCMPEMTGYDLLKRVKAQTSALKEIPVVLMSSENDSNRIERCLAEGAEEFIIKPVKMA 119
Query: 128 DVNKL 132
DV +L
Sbjct: 120 DVKRL 124
>gi|115450024|ref|NP_001048613.1| Os02g0830200 [Oryza sativa Japonica Group]
gi|48716336|dbj|BAD22948.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273479|emb|CAI79407.1| Type A response regulator 3 [Oryza sativa Indica Group]
gi|87116380|dbj|BAE79349.1| typeA response regulator 3 [Oryza sativa Japonica Group]
gi|113538144|dbj|BAF10527.1| Os02g0830200 [Oryza sativa Japonica Group]
gi|118790834|tpd|FAA00265.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125541719|gb|EAY88114.1| hypothetical protein OsI_09552 [Oryza sativa Indica Group]
gi|125584256|gb|EAZ25187.1| hypothetical protein OsJ_08987 [Oryza sativa Japonica Group]
Length = 131
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 100/129 (77%), Gaps = 10/129 (7%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
V + + HVLAVDDSI+DR +I RLL++S Y+VT VDSG +ALE L L
Sbjct: 6 VPEPEPHVLAVDDSIVDRTVISRLLRSSKYRVTTVDSGKRALEVLSLDR----------N 55
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
V++IITDYCMP MTG+DLL+++KESA LK+IPVV+MSSEN P+RI RCLEEGAE+F +KP
Sbjct: 56 VHMIITDYCMPEMTGFDLLKRVKESAELKEIPVVLMSSENSPTRIRRCLEEGAEDFLIKP 115
Query: 124 VQLADVNKL 132
V+ +DV++L
Sbjct: 116 VRPSDVSRL 124
>gi|356549441|ref|XP_003543102.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 211
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/141 (60%), Positives = 110/141 (78%), Gaps = 10/141 (7%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV------ 61
FHVL VDDS+IDRKL+ERLL+ SS + T VDSG+KAL+FLGLL++D +S
Sbjct: 17 HFHVLVVDDSVIDRKLLERLLRDSSCKATFVDSGDKALKFLGLLDDDLDNSSSTSSESLQ 76
Query: 62 ---IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEE 118
I+VN+I+TDYCMPGM+GYDLL++IK S S KD+PVVIMSSEN+PSRI+ CLE GAE+
Sbjct: 77 LNGIKVNMIMTDYCMPGMSGYDLLKRIKGS-SWKDVPVVIMSSENVPSRISMCLEGGAEK 135
Query: 119 FFLKPVQLADVNKLKPHLMKG 139
F LKP+Q +D+ KL+P +K
Sbjct: 136 FLLKPLQQSDLEKLQPCFLKS 156
>gi|413919924|gb|AFW59856.1| cytokinin response regulator2 [Zea mays]
Length = 159
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 97/123 (78%), Gaps = 8/123 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I ++L++S Y+VT VDS +ALE L L V VN+IIT
Sbjct: 40 HVLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLAL--------GLVPDVNMIIT 91
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MPGMTGY+LL+ +KES++L+ IPVVIMSSEN+P+RI+RCLEEGAE+F LKPV+ ADV
Sbjct: 92 DYWMPGMTGYELLKHVKESSALRAIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADV 151
Query: 130 NKL 132
++L
Sbjct: 152 SRL 154
>gi|168043274|ref|XP_001774110.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674517|gb|EDQ61024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 131
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/133 (58%), Positives = 105/133 (78%), Gaps = 3/133 (2%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
+ SQ+HVL VDDS ID++++E+LL TSS++VT V+S +ALE LGL D +S +
Sbjct: 1 SSSQYHVLTVDDSRIDQRVVEKLLMTSSFKVTTVNSALRALELLGL--SDSCPSSVKPDI 58
Query: 65 NLIITDYCMPGMTGYDLLRKIK-ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
NLI+TDYCMP MTGYDLL+++K ++++LK+IPVV+MSSEN RI RCL EGAEEF +KP
Sbjct: 59 NLIMTDYCMPEMTGYDLLKRVKADTSALKEIPVVVMSSENDSIRIERCLAEGAEEFIIKP 118
Query: 124 VQLADVNKLKPHL 136
VQ+ADV +L+ HL
Sbjct: 119 VQMADVKRLRGHL 131
>gi|162458152|ref|NP_001104849.1| cytokinin response regulator2 [Zea mays]
gi|5689236|dbj|BAA82873.1| ZmRR2 [Zea mays]
gi|6009897|dbj|BAA85113.1| response regulator 2 [Zea mays]
Length = 157
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 97/123 (78%), Gaps = 8/123 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I ++L++S Y+VT VDS +ALE L L V VN+IIT
Sbjct: 38 HVLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLAL--------GLVPDVNMIIT 89
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MPGMTGY+LL+ +KES++L+ IPVVIMSSEN+P+RI+RCLEEGAE+F LKPV+ ADV
Sbjct: 90 DYWMPGMTGYELLKHVKESSALRAIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADV 149
Query: 130 NKL 132
++L
Sbjct: 150 SRL 152
>gi|33330866|gb|AAQ10676.1| type-A response regulator [Catharanthus roseus]
Length = 154
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/144 (54%), Positives = 111/144 (77%), Gaps = 13/144 (9%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLG-----------LLNEDEQ 56
+ HVLAVDD+IIDRK++E+LL +SS +VT ++G +ALE+LG L++D+
Sbjct: 8 ELHVLAVDDNIIDRKIVEKLLISSSCKVTTAENGIRALEYLGNLGVHSESQTPALHQDDA 67
Query: 57 --TNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE 114
T + ++VNLIITDYC P MTGY+LL+KIKES+ LKDIPV++MSSENIP+RI++CLEE
Sbjct: 68 IPTAAGDLKVNLIITDYCKPEMTGYELLKKIKESSILKDIPVIVMSSENIPTRIHKCLEE 127
Query: 115 GAEEFFLKPVQLADVNKLKPHLMK 138
GA+ F LKP++ +DV +L+ LM+
Sbjct: 128 GAQMFMLKPLKHSDVTRLRCQLMQ 151
>gi|90265238|emb|CAH67773.1| H0322F07.10 [Oryza sativa Indica Group]
gi|90399191|emb|CAH68178.1| H0403D02.6 [Oryza sativa Indica Group]
gi|125550193|gb|EAY96015.1| hypothetical protein OsI_17886 [Oryza sativa Indica Group]
Length = 170
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 100/126 (79%), Gaps = 8/126 (6%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S+ HVLAVDDS +DR +I ++L++S Y+VT V+S +ALE L L V VN+
Sbjct: 48 SEMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCL--------GLVPNVNM 99
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
IITDY MPGMTGY+LL+++KES+ LK+IPVVIMSSEN+P+RI+RCLEEGAE+F LKPV+
Sbjct: 100 IITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRP 159
Query: 127 ADVNKL 132
+DV++L
Sbjct: 160 SDVSRL 165
>gi|115461262|ref|NP_001054231.1| Os04g0673300 [Oryza sativa Japonica Group]
gi|32488053|emb|CAE03227.1| OSJNBa0018M05.2 [Oryza sativa Japonica Group]
gi|70663953|emb|CAJ14992.1| OSJNBb0004A17.17 [Oryza sativa Japonica Group]
gi|71273485|emb|CAI79410.1| Type A response regulator 6 [Oryza sativa Indica Group]
gi|87116376|dbj|BAE79347.1| typeA response regulator 6 [Oryza sativa Japonica Group]
gi|113565802|dbj|BAF16145.1| Os04g0673300 [Oryza sativa Japonica Group]
gi|118790854|tpd|FAA00267.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125592032|gb|EAZ32382.1| hypothetical protein OsJ_16592 [Oryza sativa Japonica Group]
gi|215765394|dbj|BAG87091.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 170
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 100/126 (79%), Gaps = 8/126 (6%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S+ HVLAVDDS +DR +I ++L++S Y+VT V+S +ALE L L V VN+
Sbjct: 48 SEMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCL--------GLVPNVNM 99
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
IITDY MPGMTGY+LL+++KES+ LK+IPVVIMSSEN+P+RI+RCLEEGAE+F LKPV+
Sbjct: 100 IITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRP 159
Query: 127 ADVNKL 132
+DV++L
Sbjct: 160 SDVSRL 165
>gi|414878657|tpg|DAA55788.1| TPA: hypothetical protein ZEAMMB73_373156 [Zea mays]
Length = 123
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 93/110 (84%), Gaps = 4/110 (3%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT----NSQ 60
+S+FHVLAVDDS++DRKLIE LLKTSSYQVT VDSG+KALE LGL + + + Q
Sbjct: 6 AESRFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQ 65
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
I VNLIITDYCMPGMTGYDLL+++K S+SLKDIPVVIMSSEN+P+RI+R
Sbjct: 66 EIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISR 115
>gi|242076534|ref|XP_002448203.1| hypothetical protein SORBIDRAFT_06g022960 [Sorghum bicolor]
gi|241939386|gb|EES12531.1| hypothetical protein SORBIDRAFT_06g022960 [Sorghum bicolor]
Length = 134
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 103/132 (78%), Gaps = 10/132 (7%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S HVLAVDDS +DR +I +L++S ++VTAVDSG +ALE LG + N V++
Sbjct: 13 SAPHVLAVDDSSVDRAVIAGILRSSHFRVTAVDSGKRALELLG-----TEPN-----VSM 62
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
IITDY MP MTGY+LL+K+KES+ LK+IPVVIMSSEN+P+RINRCLEEGAE+F LKPV+
Sbjct: 63 IITDYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRP 122
Query: 127 ADVNKLKPHLMK 138
ADV++L +++
Sbjct: 123 ADVSRLCSRVLR 134
>gi|260446968|emb|CBG76250.1| OO_Ba0005L10-OO_Ba0081K17.1 [Oryza officinalis]
Length = 151
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 99/125 (79%), Gaps = 8/125 (6%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS +DR +I ++L++S Y+VT V+S +ALE L L V VN+I
Sbjct: 30 EMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCL--------GLVPNVNMI 81
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITDY MPGMTGY+LL+++KES+ LK+IPVVIMSSEN+P+RI+RCLEEGAE+F LKPV+ +
Sbjct: 82 ITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRPS 141
Query: 128 DVNKL 132
DV++L
Sbjct: 142 DVSRL 146
>gi|125600088|gb|EAZ39664.1| hypothetical protein OsJ_24093 [Oryza sativa Japonica Group]
Length = 212
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 100/129 (77%), Gaps = 10/129 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+V+AVDDS +DR +I LL+ S Y+VTAVDSG +ALE LG + N V++IIT
Sbjct: 94 YVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILG-----SEPN-----VSMIIT 143
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP MTGYDLL+KIKES+ LK IPVVIMSSEN+P+RI+RCLEEGAE+F LKPV+ AD+
Sbjct: 144 DYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADI 203
Query: 130 NKLKPHLMK 138
+++ +++
Sbjct: 204 SRITSRMLQ 212
>gi|110617744|gb|ABG78591.1| response regulator [Oryza sativa Japonica Group]
Length = 210
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 100/129 (77%), Gaps = 10/129 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+V+AVDDS +DR +I LL+ S Y+VTAVDSG +ALE LG + N V++IIT
Sbjct: 92 YVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILG-----SEPN-----VSMIIT 141
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP MTGYDLL+KIKES+ LK IPVVIMSSEN+P+RI+RCLEEGAE+F LKPV+ AD+
Sbjct: 142 DYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADI 201
Query: 130 NKLKPHLMK 138
+++ +++
Sbjct: 202 SRITSRMLQ 210
>gi|162458935|ref|NP_001104854.1| aberrant phyllotaxy1 [Zea mays]
gi|11041692|dbj|BAB17300.1| response regulator [Zea mays]
gi|414586309|tpg|DAA36880.1| TPA: aberrant phyllotaxy1 [Zea mays]
Length = 135
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 102/129 (79%), Gaps = 10/129 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I +L++S ++VTAVDSG +ALE LG + N V++IIT
Sbjct: 17 HVLAVDDSSVDRAVIAGILRSSQFRVTAVDSGKRALELLG-----TEPN-----VSMIIT 66
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP MTGY+LL+KIKES+ LK+IPVVIMSSEN+P+RINRCLEEGAE+F LKPV+ +DV
Sbjct: 67 DYWMPEMTGYELLKKIKESSRLKEIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRPSDV 126
Query: 130 NKLKPHLMK 138
++L +++
Sbjct: 127 SRLCSRVLR 135
>gi|125558184|gb|EAZ03720.1| hypothetical protein OsI_25852 [Oryza sativa Indica Group]
Length = 211
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 100/129 (77%), Gaps = 10/129 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+V+AVDDS +DR +I LL+ S Y+VTAVDSG +ALE LG + N V++IIT
Sbjct: 93 YVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILG-----SEPN-----VSMIIT 142
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP MTGYDLL+KIKES+ LK IPVVIMSSEN+P+RI+RCLEEGAE+F LKPV+ AD+
Sbjct: 143 DYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADI 202
Query: 130 NKLKPHLMK 138
+++ +++
Sbjct: 203 SRITSRMLQ 211
>gi|351724253|ref|NP_001238075.1| uncharacterized protein LOC100527828 [Glycine max]
gi|255633320|gb|ACU17017.1| unknown [Glycine max]
Length = 222
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/160 (57%), Positives = 124/160 (77%), Gaps = 6/160 (3%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDE---QTNSQV-IQ 63
+ HVLAVDDS +DRK+IE LLK + +VTAVDSG +AL+ LGLL+E + +TN V ++
Sbjct: 28 EVHVLAVDDSTVDRKVIEHLLKVLACKVTAVDSGLRALQLLGLLDEQKIPSETNGFVGLK 87
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
V+LIITDYCMPGMTGY+LL++IKES++ K+ PVVIMSSEN+ RI+RCLEEGAE+F +KP
Sbjct: 88 VDLIITDYCMPGMTGYELLKRIKESSTFKETPVVIMSSENVLPRIDRCLEEGAEDFIVKP 147
Query: 124 VQLADVNKLKPHL-MKGISKEI-KEPNNINNKRKGLEEID 161
V+L+DV +LK ++ K + E+ +E NKRK L+ D
Sbjct: 148 VKLSDVKRLKDYMTTKEVRGELSQEEREGINKRKLLDTSD 187
>gi|413951288|gb|AFW83937.1| hypothetical protein ZEAMMB73_670408 [Zea mays]
Length = 127
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/122 (64%), Positives = 93/122 (76%), Gaps = 16/122 (13%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ-------- 56
+S+FHVLAVDDSIIDRKLIE LLK+SSYQVT VDSGNKALE LGL + +
Sbjct: 6 AESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGAEDASPPSSS 65
Query: 57 --------TNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI 108
+ Q I V+LIITDYCMPGMTGYDLL+++K S+SLKDIPVVIMSSEN+P+RI
Sbjct: 66 SSSSSSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARI 125
Query: 109 NR 110
+R
Sbjct: 126 SR 127
>gi|115459496|ref|NP_001053348.1| Os04g0524300 [Oryza sativa Japonica Group]
gi|71273483|emb|CAI79409.1| Type A response regulator 5 [Oryza sativa Indica Group]
gi|87116378|dbj|BAE79348.1| typeA response regulator 5 [Oryza sativa Japonica Group]
gi|113564919|dbj|BAF15262.1| Os04g0524300 [Oryza sativa Japonica Group]
gi|116310946|emb|CAH67883.1| OSIGBa0153E02-OSIGBa0093I20.12 [Oryza sativa Indica Group]
gi|118790846|tpd|FAA00266.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215741219|dbj|BAG97714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195239|gb|EEC77666.1| hypothetical protein OsI_16696 [Oryza sativa Indica Group]
Length = 134
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 101/129 (78%), Gaps = 10/129 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I +L++S ++VTAVDSG +ALE LG + N V++IIT
Sbjct: 16 HVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLG-----SEPN-----VSMIIT 65
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP MTGY+LL+K+KES+ LK+IPVVIMSSEN+ +RINRCLEEGAE+F LKPVQ +DV
Sbjct: 66 DYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSDV 125
Query: 130 NKLKPHLMK 138
++L +++
Sbjct: 126 SRLCSRVLR 134
>gi|57834122|emb|CAE05717.2| OSJNBb0065J09.13 [Oryza sativa Japonica Group]
Length = 137
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 101/129 (78%), Gaps = 10/129 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I +L++S ++VTAVDSG +ALE LG + N V++IIT
Sbjct: 16 HVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLG-----SEPN-----VSMIIT 65
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP MTGY+LL+K+KES+ LK+IPVVIMSSEN+ +RINRCLEEGAE+F LKPVQ +DV
Sbjct: 66 DYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSDV 125
Query: 130 NKLKPHLMK 138
++L +++
Sbjct: 126 SRLCSRVLR 134
>gi|357116980|ref|XP_003560254.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 172
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 99/129 (76%), Gaps = 10/129 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+V+AVDDS +DR +I LL+ S Y+VTAVDSG +ALE L D + N V++IIT
Sbjct: 54 YVMAVDDSSVDRAVITALLRRSKYKVTAVDSGKRALEIL-----DSEPN-----VSMIIT 103
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP MTGYDLL+K+KES+ LK IPVVIMSSEN+P+RI RCLEEGAEEF LKPV+ +D+
Sbjct: 104 DYWMPEMTGYDLLKKVKESSELKQIPVVIMSSENVPTRITRCLEEGAEEFLLKPVRPSDI 163
Query: 130 NKLKPHLMK 138
+++ +++
Sbjct: 164 SRISTRMLQ 172
>gi|222629233|gb|EEE61365.1| hypothetical protein OsJ_15511 [Oryza sativa Japonica Group]
Length = 526
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 101/129 (78%), Gaps = 10/129 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I +L++S ++VTAVDSG +ALE LG + N V++IIT
Sbjct: 16 HVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLG-----SEPN-----VSMIIT 65
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP MTGY+LL+K+KES+ LK+IPVVIMSSEN+ +RINRCLEEGAE+F LKPVQ +DV
Sbjct: 66 DYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSDV 125
Query: 130 NKLKPHLMK 138
++L +++
Sbjct: 126 SRLCSRVLR 134
>gi|359828774|gb|AEV76989.1| type A response regulator 5, partial [Triticum aestivum]
Length = 119
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 102/129 (79%), Gaps = 10/129 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I +L++S ++VTAVDSG +ALE LG + N V++IIT
Sbjct: 1 HVLAVDDSSVDRAVISGILRSSRFRVTAVDSGKRALELLG-----SEPN-----VSMIIT 50
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP MTGY+LL+K+KES+ LK+IPVVIMSSEN+P+RI+RCLEEGAE+F +KPV+ +DV
Sbjct: 51 DYWMPEMTGYELLKKVKESSKLKEIPVVIMSSENVPTRISRCLEEGAEDFLMKPVRPSDV 110
Query: 130 NKLKPHLMK 138
++L +++
Sbjct: 111 SRLCSRVLR 119
>gi|357142908|ref|XP_003572733.1| PREDICTED: two-component response regulator ARR3-like [Brachypodium
distachyon]
Length = 143
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/124 (59%), Positives = 99/124 (79%), Gaps = 10/124 (8%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
HVLAVDDS +DR +I +L++S ++VTAVDSG +ALE LGL + N V++II
Sbjct: 24 LHVLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLGL-----EPN-----VSMII 73
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TDY MP MTGY+LL+K+KES+ LK IPVVIMSSEN+P+RI+RCLEEGAE+F +KPV+ +D
Sbjct: 74 TDYWMPEMTGYELLKKVKESSKLKQIPVVIMSSENVPTRISRCLEEGAEDFLVKPVRPSD 133
Query: 129 VNKL 132
V+++
Sbjct: 134 VSRV 137
>gi|351725357|ref|NP_001235042.1| uncharacterized protein LOC100305926 [Glycine max]
gi|255627003|gb|ACU13846.1| unknown [Glycine max]
Length = 223
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 122/164 (74%), Gaps = 13/164 (7%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDE---QTNS-QVIQ 63
+ HVLAVDDSI+DRK+IE LK + +VTAVDSG +AL+ LGLL+E + +TN ++
Sbjct: 28 EVHVLAVDDSIVDRKVIEHSLKVLACKVTAVDSGLRALQLLGLLDEQKIPSETNGFGGLK 87
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
V+LIITDYCMPGMTGY+LL+KIKES+S K+ PVVIMSSEN+ RI+RCLEEGAE+F +KP
Sbjct: 88 VDLIITDYCMPGMTGYELLKKIKESSSFKETPVVIMSSENVLPRIDRCLEEGAEDFIVKP 147
Query: 124 VQLADVNKLKPHLMKGISKEI------KEPNNINNKRKGLEEID 161
V+L+DV +LK + +KE+ +E NKRK L+ D
Sbjct: 148 VKLSDVKRLKDFMT---TKEVIRGELSQEEREGINKRKLLDTSD 188
>gi|357164784|ref|XP_003580165.1| PREDICTED: two-component response regulator ARR4-like [Brachypodium
distachyon]
Length = 137
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 96/123 (78%), Gaps = 10/123 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I +L++S ++VTAVDS +ALE LG V++IIT
Sbjct: 19 HVLAVDDSSVDRAVITGILRSSKFRVTAVDSAKRALELLG----------SGANVSMIIT 68
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP MTGY+LL+K+KES+ L++IPVVIMSSEN+P+RINRCLEEGAE+F LKPV+ +DV
Sbjct: 69 DYWMPDMTGYELLKKVKESSKLREIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRRSDV 128
Query: 130 NKL 132
++L
Sbjct: 129 SRL 131
>gi|115447443|ref|NP_001047501.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|49389191|dbj|BAD26481.1| putative response regulator [Oryza sativa Japonica Group]
gi|87116382|dbj|BAE79350.1| typeA response regulator 11 [Oryza sativa Japonica Group]
gi|113537032|dbj|BAF09415.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|118790875|tpd|FAA00270.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218191220|gb|EEC73647.1| hypothetical protein OsI_08171 [Oryza sativa Indica Group]
gi|222623289|gb|EEE57421.1| hypothetical protein OsJ_07618 [Oryza sativa Japonica Group]
Length = 147
Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 98/123 (79%), Gaps = 10/123 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I +L++S ++VTAVDSG +ALE LG + N V++IIT
Sbjct: 29 HVLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLG-----SEPN-----VSMIIT 78
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP MTGY+LL+K+KES+ LK IPVVIMSSEN+P+RI+RCLEEGAE+F +KPV+ +DV
Sbjct: 79 DYWMPEMTGYELLKKVKESSKLKKIPVVIMSSENVPTRISRCLEEGAEDFLVKPVRPSDV 138
Query: 130 NKL 132
++L
Sbjct: 139 SRL 141
>gi|226492361|ref|NP_001146526.1| uncharacterized protein LOC100280118 [Zea mays]
gi|219887677|gb|ACL54213.1| unknown [Zea mays]
Length = 127
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/122 (63%), Positives = 92/122 (75%), Gaps = 16/122 (13%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ-------- 56
+S+FHVLAVDDSIIDRKLIE LLK+SSYQVT VDSGNKALE LG + +
Sbjct: 6 AESRFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGPRDNGAEDASPPSSS 65
Query: 57 --------TNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI 108
+ Q I V+LIITDYCMPGMTGYDLL+++K S+SLKDIPVVIMSSEN+P+RI
Sbjct: 66 SSSSSSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARI 125
Query: 109 NR 110
+R
Sbjct: 126 SR 127
>gi|195641278|gb|ACG40107.1| two-component response regulator ARR3 [Zea mays]
Length = 136
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 100/129 (77%), Gaps = 10/129 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I +L++S ++VTAV+SG +ALE LG + N V++IIT
Sbjct: 18 HVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLG-----TEPN-----VSMIIT 67
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DYCMP MTGY+LL+K+KES+ LK IPVVIMSSEN+ +RI RCLEEGAE+F +KPV+ +DV
Sbjct: 68 DYCMPEMTGYELLKKVKESSKLKQIPVVIMSSENVSTRIRRCLEEGAEDFLVKPVRASDV 127
Query: 130 NKLKPHLMK 138
+++ +++
Sbjct: 128 SRVFSRVLR 136
>gi|224124816|ref|XP_002319429.1| type-a response regulator [Populus trichocarpa]
gi|222857805|gb|EEE95352.1| type-a response regulator [Populus trichocarpa]
Length = 131
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 99/135 (73%), Gaps = 10/135 (7%)
Query: 1 MGMVTDSQFHVLAV---DDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT 57
MG D + HVLAV DD +IDRK IERLL S Y+VT ++ KA+E+LGL + T
Sbjct: 1 MGFDFDEKLHVLAVEAVDDGLIDRKAIERLLINSEYKVTTAENKKKAIEYLGL-ADGHHT 59
Query: 58 NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAE 117
N ++VNLIITDYCM GMTGY+LL++IKE IPVV++SSENIP+RI +C+EEGA+
Sbjct: 60 NHGDLKVNLIITDYCMRGMTGYELLKRIKE------IPVVVVSSENIPTRIKQCMEEGAQ 113
Query: 118 EFFLKPVQLADVNKL 132
EF LKP+QL+ V KL
Sbjct: 114 EFLLKPLQLSGVTKL 128
>gi|226499956|ref|NP_001141563.1| uncharacterized protein LOC100273679 [Zea mays]
gi|194705078|gb|ACF86623.1| unknown [Zea mays]
gi|413937888|gb|AFW72439.1| two-component response regulator ARR3 [Zea mays]
Length = 206
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 100/129 (77%), Gaps = 10/129 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I +L++S ++VTAV+SG +ALE LG + N V++IIT
Sbjct: 88 HVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGT-----EPN-----VSMIIT 137
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DYCMP MTGY+LL+K+KES+ LK IPVVIMSSEN+ +RI RCLEEGAE+F +KPV+ +DV
Sbjct: 138 DYCMPEMTGYELLKKVKESSKLKQIPVVIMSSENVSTRIRRCLEEGAEDFLVKPVRASDV 197
Query: 130 NKLKPHLMK 138
+++ +++
Sbjct: 198 SRVFSRVLR 206
>gi|226532303|ref|NP_001149732.1| two-component response regulator ARR3 [Zea mays]
gi|195629894|gb|ACG36588.1| two-component response regulator ARR3 [Zea mays]
gi|195650489|gb|ACG44712.1| two-component response regulator ARR3 [Zea mays]
gi|414884446|tpg|DAA60460.1| TPA: two-component response regulator ARR3 [Zea mays]
Length = 148
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 97/127 (76%), Gaps = 10/127 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
V+AVDDS +DR ++ LL+ S Y+VTAVDSG +ALE LG + N V++IITD
Sbjct: 30 VIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILG-----SEPN-----VSMIITD 79
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
Y MP MTGYDLL+K+KES+ LK IPVVIMSSEN+P+RI RCLEEGAE+F LKPV+ +D++
Sbjct: 80 YWMPEMTGYDLLKKVKESSKLKRIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDIS 139
Query: 131 KLKPHLM 137
++ ++
Sbjct: 140 RITTRML 146
>gi|242043834|ref|XP_002459788.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
gi|241923165|gb|EER96309.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
Length = 168
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 96/127 (75%), Gaps = 10/127 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
V+AVDD +DR L+ LL+ S Y+VTAVDSG +ALE LG + N V++IITD
Sbjct: 50 VIAVDDCSVDRALVTALLRRSKYRVTAVDSGKRALEILG-----SEPN-----VSMIITD 99
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
Y MP MTGYDLL+K+KES+ LK IPVVIMSSEN+P+RI RCLEEGAE+F LKPV+ +D++
Sbjct: 100 YWMPEMTGYDLLKKVKESSKLKQIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDIS 159
Query: 131 KLKPHLM 137
++ ++
Sbjct: 160 RITTRIL 166
>gi|242065846|ref|XP_002454212.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
gi|241934043|gb|EES07188.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
Length = 151
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 100/129 (77%), Gaps = 10/129 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I +L++S ++VTAV+SG +ALE LG + N V++IIT
Sbjct: 33 HVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLG-----TEPN-----VSMIIT 82
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP MTGY+LL+K+KES+ LK IPVVIMSSEN+ +RI+RCLEEGAE+F +KPV+ +DV
Sbjct: 83 DYWMPEMTGYELLKKVKESSKLKQIPVVIMSSENVSTRISRCLEEGAEDFLVKPVRASDV 142
Query: 130 NKLKPHLMK 138
+++ +++
Sbjct: 143 SRVFSRVLR 151
>gi|168022134|ref|XP_001763595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685088|gb|EDQ71485.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 146
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 108/149 (72%), Gaps = 20/149 (13%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSY---QVTAVDSGNKALEFLGLLNEDEQTNSQV 61
+++++H+LAVDDS ID+K+IERLLK++SY ++T V+S +AL++LGL E S V
Sbjct: 1 SNTEYHILAVDDSRIDQKVIERLLKSASYKGTELTTVNSALRALKYLGL---SESCASPV 57
Query: 62 I-------------QVNLIITDYCMPGMTGYDLLRKIK-ESASLKDIPVVIMSSENIPSR 107
+ V+LI+TDYCMP MTGY+LL+ +K E+++ KD+PV++MSSEN SR
Sbjct: 58 MPDVNRILCDLQRNAVHLIMTDYCMPEMTGYELLKIVKAETSAFKDVPVILMSSENDSSR 117
Query: 108 INRCLEEGAEEFFLKPVQLADVNKLKPHL 136
I RCL EGAEEF +KPVQ+ DV +L+ H+
Sbjct: 118 IERCLAEGAEEFIIKPVQMKDVQRLQGHI 146
>gi|162463265|ref|NP_001104838.1| cytokinin response regulator1 [Zea mays]
gi|4512216|dbj|BAA75253.1| response regulator [Zea mays]
gi|6009895|dbj|BAA85112.1| response regulator 1 [Zea mays]
Length = 157
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 95/123 (77%), Gaps = 8/123 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I R+L+ S Y+VTAV+S +ALE L L + V++IIT
Sbjct: 38 HVLAVDDSSVDRAVIARILRGSRYRVTAVESATRALELLALGLLPD--------VSMIIT 89
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MPGMTGY+LL+ +KESA+L+ IPVVIMSSEN+P+RI RCLEEGAE F LKPV+ ADV
Sbjct: 90 DYWMPGMTGYELLKCVKESAALRGIPVVIMSSENVPTRITRCLEEGAEGFLLKPVRPADV 149
Query: 130 NKL 132
++L
Sbjct: 150 SRL 152
>gi|449457395|ref|XP_004146434.1| PREDICTED: two-component response regulator ARR17-like [Cucumis
sativus]
gi|449526784|ref|XP_004170393.1| PREDICTED: two-component response regulator ARR17-like [Cucumis
sativus]
Length = 162
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 109/138 (78%), Gaps = 8/138 (5%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ-TN-------S 59
Q HVLAVDD+++DRKL+E+LLK SS +VT ++G ALEFLGLL+E Q TN
Sbjct: 24 QPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNEWQ 83
Query: 60 QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEF 119
Q +VN+IITDYCMPGM+GY+LL+KIK S+ +K++PVV++SSEN+P+RIN+CLEEGAE F
Sbjct: 84 QRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMF 143
Query: 120 FLKPVQLADVNKLKPHLM 137
LKP++ +DV KLK M
Sbjct: 144 MLKPLKQSDVVKLKCQFM 161
>gi|22831009|dbj|BAC15873.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273487|emb|CAI79411.1| Type A response regulator 7 [Oryza sativa Indica Group]
gi|87116384|dbj|BAE79351.1| typeA response regulator 7 [Oryza sativa Japonica Group]
gi|118790860|tpd|FAA00268.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 206
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 96/129 (74%), Gaps = 14/129 (10%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+V+AVDDS +DR +I LL+ S Y+ DSG +ALE LG + N V++IIT
Sbjct: 92 YVMAVDDSSVDRAVITALLRRSKYR----DSGKRALEILG-----SEPN-----VSMIIT 137
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MP MTGYDLL+KIKES+ LK IPVVIMSSEN+P+RI+RCLEEGAE+F LKPV+ AD+
Sbjct: 138 DYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADI 197
Query: 130 NKLKPHLMK 138
+++ +++
Sbjct: 198 SRITSRMLQ 206
>gi|242074746|ref|XP_002447309.1| hypothetical protein SORBIDRAFT_06g032600 [Sorghum bicolor]
gi|241938492|gb|EES11637.1| hypothetical protein SORBIDRAFT_06g032600 [Sorghum bicolor]
Length = 170
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 96/123 (78%), Gaps = 8/123 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I ++L++S Y+VT V+S +ALE L L + VN+IIT
Sbjct: 51 HVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLALGLLPD--------VNMIIT 102
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MPGMTGY+LL+ +KES+ L++IPVVIMSSEN+P+RI RCLEEGAE+F LKPV+ +DV
Sbjct: 103 DYWMPGMTGYELLKHVKESSELREIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDV 162
Query: 130 NKL 132
++L
Sbjct: 163 SRL 165
>gi|226497480|ref|NP_001147402.1| RR6 - Corn type-A response regulator [Zea mays]
gi|223946411|gb|ACN27289.1| unknown [Zea mays]
gi|414584832|tpg|DAA35403.1| TPA: response regulatorResponse regulator 1 [Zea mays]
Length = 156
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 95/123 (77%), Gaps = 8/123 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I R+L+ S Y+VTAV+S +ALE L L + V++IIT
Sbjct: 37 HVLAVDDSSVDRAVIARILRGSRYKVTAVESATRALELLALGLLPD--------VSMIIT 88
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MPGMTGY+LL+++KESA+L+ IPVVIMSSEN+ +RI RCLEEGAE F LKPV+ ADV
Sbjct: 89 DYWMPGMTGYELLKRVKESAALRGIPVVIMSSENVSTRITRCLEEGAEGFLLKPVRPADV 148
Query: 130 NKL 132
++L
Sbjct: 149 SRL 151
>gi|260765421|gb|ACX49754.1| cytokinin response regulator 11 [Zea mays]
Length = 156
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 95/123 (77%), Gaps = 8/123 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I R+L+ S Y+VTAV+S +ALE L L + V++IIT
Sbjct: 37 HVLAVDDSSVDRTVIARILRGSRYKVTAVESATRALELLALGLLPD--------VSMIIT 88
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MPGMTGY+LL+++KESA+L+ IPVVIMSSEN+ +RI RCLEEGAE F LKPV+ ADV
Sbjct: 89 DYWMPGMTGYELLKRVKESAALRGIPVVIMSSENVSTRITRCLEEGAEGFLLKPVRPADV 148
Query: 130 NKL 132
++L
Sbjct: 149 SRL 151
>gi|7594516|emb|CAB88041.1| response regulator-like protein [Arabidopsis thaliana]
Length = 122
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 94/107 (87%), Gaps = 3/107 (2%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS--QVIQ 63
+ + HVLAVDD++IDRKL+ER+LK SS +VT ++G +ALE+LGL + +QT+S V++
Sbjct: 17 EEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGL-GDPQQTDSLTNVMK 75
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
VNLIITDYCMPGMTG++LL+K+KES++LK++PVVI+SSENIP+RIN+
Sbjct: 76 VNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINK 122
>gi|168064728|ref|XP_001784311.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664142|gb|EDQ50873.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 149
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 105/143 (73%), Gaps = 14/143 (9%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ---- 63
Q+HVLAVDDS++D+++IE+LLK + VT VDS +AL+ LGL +E ++S+V+
Sbjct: 1 QYHVLAVDDSMVDQRVIEKLLK-PLHAVTTVDSAVRALDVLGL-SETRPSSSKVLHFNSF 58
Query: 64 -------VNLIITDYCMPGMTGYDLLRKIK-ESASLKDIPVVIMSSENIPSRINRCLEEG 115
+NLI+TDY MP MTGYDLL+++K +S++LK+IPVV+MSSEN RI RCL EG
Sbjct: 59 VQIKKLDINLIMTDYFMPEMTGYDLLKRVKAKSSALKEIPVVLMSSENDSHRIRRCLAEG 118
Query: 116 AEEFFLKPVQLADVNKLKPHLMK 138
A+ F KPVQLADV +L+ ++ +
Sbjct: 119 ADAFLTKPVQLADVKRLRGYIRR 141
>gi|255564944|ref|XP_002523465.1| receptor histidine kinase, putative [Ricinus communis]
gi|223537293|gb|EEF38924.1| receptor histidine kinase, putative [Ricinus communis]
Length = 185
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 99/134 (73%), Gaps = 5/134 (3%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNE--DEQT-NSQV 61
T + HVLAVDD +DRK++E+LLK +S++VT+VD+G KA+E LGL + D+ T N Q
Sbjct: 15 TVAPIHVLAVDDCFLDRKIVEKLLKNASFKVTSVDNGKKAMEILGLSQDKVDKSTYNDQ- 73
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
++++I+TDYCMP M GYDLL +K +++K IPVVI+SSE P RI+RCL GAE+F
Sbjct: 74 -KIDIILTDYCMPEMNGYDLLMAVKGHSNVKSIPVVIISSEYDPQRISRCLANGAEDFLQ 132
Query: 122 KPVQLADVNKLKPH 135
KP+Q D+ KL+ +
Sbjct: 133 KPLQQKDLQKLRSY 146
>gi|195611056|gb|ACG27358.1| RR6 - Corn type-A response regulator [Zea mays]
Length = 156
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 94/123 (76%), Gaps = 8/123 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I R+L+ S Y+VTAV+S +ALE L L + V++IIT
Sbjct: 37 HVLAVDDSSVDRAVIARILRGSRYKVTAVESATRALELLALGLLPD--------VSMIIT 88
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DY MPGMTGY+LL+++KESA+L+ IPVVIMSSEN+ +RI R LEEGAE F LKPV+ ADV
Sbjct: 89 DYWMPGMTGYELLKRVKESAALRGIPVVIMSSENVSTRITRYLEEGAEGFLLKPVRPADV 148
Query: 130 NKL 132
++L
Sbjct: 149 SRL 151
>gi|357149551|ref|XP_003575151.1| PREDICTED: two-component response regulator ARR3-like [Brachypodium
distachyon]
Length = 226
Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 91/135 (67%), Gaps = 4/135 (2%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLL---KTSSYQVTAVDSGNKALEFLGLLNEDEQTN 58
GM + + VL VDDS +DRK+++ LL + S++ VT VDSG KA+E LG Q
Sbjct: 6 GMEPEEKLRVLVVDDSPVDRKIVQLLLNNHRGSAFHVTVVDSGKKAMELLGQ-KPQAQEE 64
Query: 59 SQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEE 118
Q +++++TDYCMP MTGYDLL+ IK S IPVV+MSSEN P RINRCL GAE+
Sbjct: 65 QQRRSIDIVLTDYCMPEMTGYDLLKAIKALNSPNPIPVVVMSSENEPQRINRCLTAGAED 124
Query: 119 FFLKPVQLADVNKLK 133
F +KP++ DV +L+
Sbjct: 125 FIVKPLRTKDVQRLR 139
>gi|359828770|gb|AEV76987.1| type A response regulator 1, partial [Triticum aestivum]
Length = 209
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 107/170 (62%), Gaps = 18/170 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKT----SSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
VL VDDS +DRK++E +L + S+ V AVDS KA+EFLGL + EQ V++
Sbjct: 5 VLLVDDSPVDRKVVELVLGSNTFAGSFHVVAVDSAKKAMEFLGLKDGKEQA------VDM 58
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
++TDYCMP MTGYDLL+ IK + LK IPV++MSSEN P RI+RCL+ GAE++ +KP+Q
Sbjct: 59 VLTDYCMPEMTGYDLLKAIKAMSPLKPIPVIVMSSENEPQRISRCLKAGAEDYIVKPLQS 118
Query: 127 ADVNKLKPHLMKGISKEIKEP--NNINNKRKGLEEID--SADRTRTRLND 172
DV P L + + K+P + ++ + +D S+ R R L D
Sbjct: 119 KDV----PRLRSCSNAKPKDPPCSTVSKSADHIAAVDGTSSLRRRAHLTD 164
>gi|242049694|ref|XP_002462591.1| hypothetical protein SORBIDRAFT_02g028660 [Sorghum bicolor]
gi|241925968|gb|EER99112.1| hypothetical protein SORBIDRAFT_02g028660 [Sorghum bicolor]
Length = 123
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 88/123 (71%), Gaps = 10/123 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVL VDD+ +DR + R+LK + QVT V+ +ALEFL + N+ VNLI+T
Sbjct: 7 HVLIVDDTFVDRLVASRVLKNCNIQVTIVEGPKQALEFLDVEND----------VNLILT 56
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DYCMPGMTGYDLL ++KES LK IPVVIMSS+NIP R+ +CL+ GA+E+ +KP++ DV
Sbjct: 57 DYCMPGMTGYDLLLEVKESPKLKHIPVVIMSSDNIPERMQKCLDAGAKEYIIKPIKAVDV 116
Query: 130 NKL 132
++
Sbjct: 117 PRI 119
>gi|194697208|gb|ACF82688.1| unknown [Zea mays]
gi|413922696|gb|AFW62628.1| response regulator 7 [Zea mays]
Length = 242
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 93/135 (68%), Gaps = 12/135 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQ-------VTAVDSGNKALEFLGLLNEDEQTNSQV-- 61
VL VDDS +DRK++E LL+ ++Q VTAVDSG KA+E L L+ + Q +S
Sbjct: 15 VLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAAD 74
Query: 62 ---IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEE 118
I +++++TDYCMP MTGYDLL+ IK +S IPVV+MSSEN P RI+RCL GAE+
Sbjct: 75 ANRITIDIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLTAGAED 134
Query: 119 FFLKPVQLADVNKLK 133
F LKP++ DV +L+
Sbjct: 135 FILKPLKTKDVQRLR 149
>gi|162459462|ref|NP_001104858.1| response regulator 7 [Zea mays]
gi|12060390|dbj|BAB20582.1| response regulator 7 [Zea mays]
Length = 242
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 93/135 (68%), Gaps = 12/135 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQ-------VTAVDSGNKALEFLGLLNEDEQTNSQV-- 61
VL VDDS +DRK++E LL+ ++Q VTAVDSG KA+E L L+ + Q +S
Sbjct: 15 VLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAAD 74
Query: 62 ---IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEE 118
I +++++TDYCMP MTGYDLL+ IK +S IPVV+MSSEN P RI+RCL GAE+
Sbjct: 75 ANRITIDIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLTAGAED 134
Query: 119 FFLKPVQLADVNKLK 133
F LKP++ DV +L+
Sbjct: 135 FILKPLKTKDVQRLR 149
>gi|414870674|tpg|DAA49231.1| TPA: hypothetical protein ZEAMMB73_704016 [Zea mays]
Length = 123
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 89/123 (72%), Gaps = 10/123 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVL VDD+ +DR + R+LKT + QVT V+ +AL+FL + N+ VNLI+T
Sbjct: 7 HVLIVDDTFVDRLVASRVLKTCNIQVTMVEGPKQALDFLDVEND----------VNLILT 56
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DYCMPGMTGYDLL ++KES LK IPVV+MSS++IP R+ +C++ GA+E+ +KP++ DV
Sbjct: 57 DYCMPGMTGYDLLMEVKESPKLKHIPVVVMSSDHIPQRMQKCMDAGAKEYIIKPIKAIDV 116
Query: 130 NKL 132
++
Sbjct: 117 PRI 119
>gi|357163783|ref|XP_003579845.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 224
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 92/126 (73%), Gaps = 9/126 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTS----SYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
VL VDDS +DRK++E +L +S S+ V AVDS KA+EFLGL + EQ + +++
Sbjct: 12 VLLVDDSPVDRKVVELVLGSSACAGSFHVIAVDSAKKAMEFLGLKDGKEQQD-----IDM 66
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
++TDYCMP MTGYDLL+ IK + LK IPV++MSSEN P RI+RCL+ GAE++ +KP++
Sbjct: 67 VLTDYCMPEMTGYDLLKAIKALSPLKPIPVIVMSSENEPQRISRCLKAGAEDYIVKPLRS 126
Query: 127 ADVNKL 132
DV +L
Sbjct: 127 KDVPRL 132
>gi|242061964|ref|XP_002452271.1| hypothetical protein SORBIDRAFT_04g022780 [Sorghum bicolor]
gi|241932102|gb|EES05247.1| hypothetical protein SORBIDRAFT_04g022780 [Sorghum bicolor]
Length = 168
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 89/128 (69%), Gaps = 9/128 (7%)
Query: 15 DDSIIDRKLIERLLK-----TSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV----IQVN 65
DDS IDRK++E LL+ + + VTAVDSG KA+E L L+ +D +S + V+
Sbjct: 21 DDSPIDRKVVELLLRNHKGGAAPFHVTAVDSGKKAMEHLRLMEQDSLDSSAAHANELTVD 80
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
+++TDYCMP MTGYDLL+ IK +S IPVV+MSSEN P RI+RCL GAE+F LKP++
Sbjct: 81 IVLTDYCMPEMTGYDLLKAIKALSSPTPIPVVVMSSENEPQRISRCLTAGAEDFILKPLK 140
Query: 126 LADVNKLK 133
DV +L+
Sbjct: 141 TKDVQRLR 148
>gi|115458564|ref|NP_001052882.1| Os04g0442300 [Oryza sativa Japonica Group]
gi|87116392|dbj|BAE79355.1| typeA response regulator 1 [Oryza sativa Japonica Group]
gi|113564453|dbj|BAF14796.1| Os04g0442300 [Oryza sativa Japonica Group]
gi|118790814|tpd|FAA00263.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215704280|dbj|BAG93120.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740726|dbj|BAG97382.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 231
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 91/127 (71%), Gaps = 9/127 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTS----SYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
VL VDDS +DR++++ LL +S S+ V AVDS KA+EFLGL E ++ +++
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQ-----AIDM 64
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
++TDYCMP MTGY+LL+ IK + LK IPV++MSSEN P RI+RC+ GAE+F +KP+Q
Sbjct: 65 VLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQS 124
Query: 127 ADVNKLK 133
DV +L+
Sbjct: 125 KDVQRLR 131
>gi|71273475|emb|CAI79405.1| Type A response regulator 1 [Oryza sativa Indica Group]
gi|218194921|gb|EEC77348.1| hypothetical protein OsI_16028 [Oryza sativa Indica Group]
Length = 231
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 91/127 (71%), Gaps = 9/127 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTS----SYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
VL VDDS +DR++++ LL +S S+ V AVDS KA+EFLGL E ++ +++
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQ-----AIDM 64
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
++TDYCMP MTGY+LL+ IK + LK IPV++MSSEN P RI+RC+ GAE+F +KP+Q
Sbjct: 65 VLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQS 124
Query: 127 ADVNKLK 133
DV +L+
Sbjct: 125 KDVQRLR 131
>gi|242081261|ref|XP_002445399.1| hypothetical protein SORBIDRAFT_07g015180 [Sorghum bicolor]
gi|241941749|gb|EES14894.1| hypothetical protein SORBIDRAFT_07g015180 [Sorghum bicolor]
Length = 123
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 91/132 (68%), Gaps = 13/132 (9%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
MG V HVL VDD+ +DR + R+LK+ + QVT V+ +AL+FL + N+
Sbjct: 1 MGTVAP---HVLIVDDTFVDRLVASRVLKSCNIQVTIVEGPKQALDFLDVEND------- 50
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
V LI+TDYCMPGMTGYDLL ++KES L IPVVIMSS+NIP RI +CL A+E+
Sbjct: 51 ---VKLILTDYCMPGMTGYDLLMEVKESPKLNHIPVVIMSSDNIPERIQKCLAARAKEYI 107
Query: 121 LKPVQLADVNKL 132
+KP+++ADV+++
Sbjct: 108 IKPIKVADVHRI 119
>gi|224034623|gb|ACN36387.1| unknown [Zea mays]
gi|413918403|gb|AFW58335.1| RR1-Corn type-A response regulator [Zea mays]
Length = 232
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 91/136 (66%), Gaps = 9/136 (6%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKT----SSYQVTAVDSGNKALEFLGLLNEDEQT 57
G+ + VL VDDS +DR++ + LL + S+ V AVDS KA+EFLGL + E+
Sbjct: 7 GVEAEGVMRVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIAVDSARKAMEFLGLKDGGEEQ 66
Query: 58 NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAE 117
V++++TDYCMP MTGYDLL+ IK L+ IPVV+MSSE+ P RI+RCL GAE
Sbjct: 67 -----AVDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAE 121
Query: 118 EFFLKPVQLADVNKLK 133
+F +KP+Q DV +L+
Sbjct: 122 DFIVKPLQSKDVQRLR 137
>gi|195656043|gb|ACG47489.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 232
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 91/136 (66%), Gaps = 9/136 (6%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKT----SSYQVTAVDSGNKALEFLGLLNEDEQT 57
G+ + VL VDDS +DR++ + LL + S+ V AVDS KA+EFLGL + E+
Sbjct: 7 GVEAEGVMRVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIAVDSARKAMEFLGLKDGGEEQ 66
Query: 58 NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAE 117
V++++TDYCMP MTGYDLL+ IK L+ IPVV+MSSE+ P RI+RCL GAE
Sbjct: 67 -----AVDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAE 121
Query: 118 EFFLKPVQLADVNKLK 133
+F +KP+Q DV +L+
Sbjct: 122 DFIVKPLQSKDVQRLR 137
>gi|222628933|gb|EEE61065.1| hypothetical protein OsJ_14923 [Oryza sativa Japonica Group]
Length = 231
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 90/127 (70%), Gaps = 9/127 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTS----SYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
VL VDDS +DR++++ LL +S S+ V AVDS KAL FLGL E+ Q I ++
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKALGFLGL---KEKGKEQAI--DM 64
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
++TDYCMP MTGY+LL+ IK + LK IPV++MSSEN P RI+RC+ GAE+F +KP+Q
Sbjct: 65 VLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQS 124
Query: 127 ADVNKLK 133
DV +L+
Sbjct: 125 KDVQRLR 131
>gi|3953605|dbj|BAA34730.1| response regulator 6 [Arabidopsis thaliana]
Length = 162
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 86/130 (66%), Gaps = 24/130 (18%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
HVLAVDDS +DRK IERLL+ SS +VT VDS +AL++LGL E++ + ++VNLI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TDY MPGMTGY+LL+KIK CLEEGAE+F LKPV+L+D
Sbjct: 85 TDYSMPGMTGYELLKKIK------------------------CLEEGAEDFLLKPVKLSD 120
Query: 129 VNKLKPHLMK 138
V +L+ LMK
Sbjct: 121 VKRLRDSLMK 130
>gi|242073184|ref|XP_002446528.1| hypothetical protein SORBIDRAFT_06g017550 [Sorghum bicolor]
gi|241937711|gb|EES10856.1| hypothetical protein SORBIDRAFT_06g017550 [Sorghum bicolor]
Length = 249
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 90/134 (67%), Gaps = 8/134 (5%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKT----SSYQVTAVDSGNKALEFLGLLNEDEQTNS 59
V + VL VDDS +DR++ + LL + S+ V AVDS KA+EFLGL +D
Sbjct: 9 VEEGVMRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGL--KDGGGKE 66
Query: 60 QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEF 119
Q I ++++TDYCMP MTGYDLL+ IK LK IPV++MSSE+ P RI+RCL GAE+F
Sbjct: 67 QAI--DMVLTDYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISRCLSAGAEDF 124
Query: 120 FLKPVQLADVNKLK 133
+KP+Q DV +L+
Sbjct: 125 IVKPLQSKDVQRLR 138
>gi|242075916|ref|XP_002447894.1| hypothetical protein SORBIDRAFT_06g017560 [Sorghum bicolor]
gi|241939077|gb|EES12222.1| hypothetical protein SORBIDRAFT_06g017560 [Sorghum bicolor]
Length = 194
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 90/134 (67%), Gaps = 8/134 (5%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKT----SSYQVTAVDSGNKALEFLGLLNEDEQTNS 59
V + VL VDDS +DR++ + LL + S+ V AVDS KA+EFLGL +D
Sbjct: 9 VEEGVMRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGL--KDGGGKE 66
Query: 60 QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEF 119
Q I ++++TDYCMP MTGYDLLR IK LK IPV++MSSE+ P RI+RCL GAE++
Sbjct: 67 QTI--DMVLTDYCMPEMTGYDLLRAIKALNPLKPIPVIVMSSEDEPQRISRCLNAGAEDY 124
Query: 120 FLKPVQLADVNKLK 133
+KP+Q DV +L+
Sbjct: 125 IVKPLQSKDVQRLR 138
>gi|195651747|gb|ACG45341.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 238
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 90/136 (66%), Gaps = 9/136 (6%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKT----SSYQVTAVDSGNKALEFLGLLNEDEQT 57
G + VL VDDS +DR++ + LL + S+ V AVDS KA+EFLGL + ++
Sbjct: 5 GAGAEGVMRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDGGKEQ 64
Query: 58 NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAE 117
+++++TDYCMP MTGYDLL+ IK LK IPV++MSSE+ P RI+RCL GAE
Sbjct: 65 -----AIDMVLTDYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISRCLNAGAE 119
Query: 118 EFFLKPVQLADVNKLK 133
+F +KP+Q DV +L+
Sbjct: 120 DFIVKPLQSKDVQRLR 135
>gi|219363715|ref|NP_001137062.1| uncharacterized protein LOC100217235 [Zea mays]
gi|194698206|gb|ACF83187.1| unknown [Zea mays]
gi|224029529|gb|ACN33840.1| unknown [Zea mays]
gi|414587101|tpg|DAA37672.1| TPA: RR1-Corn type-A response regulator [Zea mays]
Length = 244
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 90/136 (66%), Gaps = 9/136 (6%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKT----SSYQVTAVDSGNKALEFLGLLNEDEQT 57
G + VL VDDS +DR++ + LL + S+ V AVDS KA+EFLGL + ++
Sbjct: 5 GAGAEGVMRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDGGKEQ 64
Query: 58 NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAE 117
+++++TDYCMP MTGYDLL+ IK LK IPV++MSSE+ P RI+RCL GAE
Sbjct: 65 -----AIDMVLTDYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISRCLNAGAE 119
Query: 118 EFFLKPVQLADVNKLK 133
+F +KP+Q DV +L+
Sbjct: 120 DFIVKPLQSKDVQRLR 135
>gi|125539898|gb|EAY86293.1| hypothetical protein OsI_07664 [Oryza sativa Indica Group]
Length = 205
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 88/148 (59%), Gaps = 27/148 (18%)
Query: 11 VLAVDDSIIDRKLIERLLKTSS-------------YQVTAVDSGNKALEFLGLLNEDE-- 55
VL VDDS +DR+++E LL+ + VTAVDSG KA+E LG D
Sbjct: 8 VLVVDDSPVDRRVVELLLRAHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLGRRRGDRDH 67
Query: 56 ----------QTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIP 105
N Q I ++++TDYCMP MTGYDLL+ IK S IPVV+MSSEN P
Sbjct: 68 LTPSSPAAAAAANDQAI--DIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSSENEP 125
Query: 106 SRINRCLEEGAEEFFLKPVQLADVNKLK 133
RI+RCL GAE+F LKP+++ DV +L+
Sbjct: 126 QRISRCLTAGAEDFILKPLKMNDVQRLR 153
>gi|383792043|dbj|BAM10424.1| Type-a response regulator protein, partial [Salix japonica]
Length = 94
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 78/94 (82%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDDS +DRK+IERLLK SS +VT V+SG++AL++LGL E ++++LI+TD
Sbjct: 1 VLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSVGFNDLKIHLIMTD 60
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENI 104
Y MPGMTGY+LL+KIKES++ ++IPVVIMSSENI
Sbjct: 61 YSMPGMTGYELLKKIKESSAFREIPVVIMSSENI 94
>gi|297599428|ref|NP_001047142.2| Os02g0557800 [Oryza sativa Japonica Group]
gi|255671003|dbj|BAF09056.2| Os02g0557800, partial [Oryza sativa Japonica Group]
Length = 306
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 88/148 (59%), Gaps = 27/148 (18%)
Query: 11 VLAVDDSIIDRKLIERLLKTSS-------------YQVTAVDSGNKALEFLGLLNEDE-- 55
VL VDDS +DR+++E LL+ + VTAVDSG KA+E LG D
Sbjct: 62 VLVVDDSPVDRRVVELLLRAHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLGRRRGDRDH 121
Query: 56 ----------QTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIP 105
N Q I ++++TDYCMP MTGYDLL+ IK S IPVV+MSSEN P
Sbjct: 122 LTPSSPAAAAAANDQAI--DIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSSENEP 179
Query: 106 SRINRCLEEGAEEFFLKPVQLADVNKLK 133
RI+RCL GAE+F LKP+++ DV +L+
Sbjct: 180 QRISRCLTAGAEDFILKPLKMNDVQRLR 207
>gi|46390908|dbj|BAD16423.1| putative response regulator 7 [Oryza sativa Japonica Group]
gi|71273477|emb|CAI79406.1| Type A response regulator 2 [Oryza sativa Indica Group]
gi|87116394|dbj|BAE79356.1| typeA response regulator 2 [Oryza sativa Japonica Group]
gi|118790824|tpd|FAA00264.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215697882|dbj|BAG92075.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 252
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 88/148 (59%), Gaps = 27/148 (18%)
Query: 11 VLAVDDSIIDRKLIERLLKTSS-------------YQVTAVDSGNKALEFLGLLNEDE-- 55
VL VDDS +DR+++E LL+ + VTAVDSG KA+E LG D
Sbjct: 8 VLVVDDSPVDRRVVELLLRAHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLGRRRGDRDH 67
Query: 56 ----------QTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIP 105
N Q I ++++TDYCMP MTGYDLL+ IK S IPVV+MSSEN P
Sbjct: 68 LTPSSPAAAAAANDQAI--DIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSSENEP 125
Query: 106 SRINRCLEEGAEEFFLKPVQLADVNKLK 133
RI+RCL GAE+F LKP+++ DV +L+
Sbjct: 126 QRISRCLTAGAEDFILKPLKMNDVQRLR 153
>gi|195651177|gb|ACG45056.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 233
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 89/134 (66%), Gaps = 7/134 (5%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVT--AVDSGNKALEFLGLLNEDEQTNS 59
G+ + VL VDDS +DR++ + LL + S + +DS KA+EFLGL + E+
Sbjct: 7 GVEAEGVMRVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIDSARKAMEFLGLKDGGEEQ-- 64
Query: 60 QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEF 119
V++++TDYCMP MTGYDLL+ IK L+ IPVV+MSSE+ P RI+RCL GAE+F
Sbjct: 65 ---AVDIVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDF 121
Query: 120 FLKPVQLADVNKLK 133
+KP+Q DV +L+
Sbjct: 122 IVKPLQSKDVQRLR 135
>gi|357138640|ref|XP_003570898.1| PREDICTED: two-component response regulator ARR8-like [Brachypodium
distachyon]
Length = 133
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 84/123 (68%), Gaps = 10/123 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVL VDD+ DR ++ LL+ S +VTAV+ +ALEFL D Q + VN+I++
Sbjct: 17 HVLVVDDTRGDRLVLTYLLQRSHVRVTAVEGVKEALEFL-----DSQND-----VNMIVS 66
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DYCMP M GYDLL ++K S L IPVVI SS+NIP RI +CL+ GA+E+ +KPVQ+ DV
Sbjct: 67 DYCMPEMNGYDLLMEVKNSPPLAHIPVVIASSDNIPERIQKCLDGGAKEYIVKPVQIPDV 126
Query: 130 NKL 132
++
Sbjct: 127 LRI 129
>gi|87116398|dbj|BAE79358.1| typeA response regulator 12 [Oryza sativa Japonica Group]
gi|118790879|tpd|FAA00271.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 121
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 87/126 (69%), Gaps = 10/126 (7%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S HVL VDD+++DR ++ L + +VTAV+S +AL FL D + + VN+
Sbjct: 2 SSPHVLVVDDTLVDRHVVSMALMRHNVRVTAVESVMQALMFL-----DSEHD-----VNM 51
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
I++DYCMP MTGYDLL ++K+S L +PVVI SS+NIP RI +CL+ GA+++ LKPV++
Sbjct: 52 IVSDYCMPDMTGYDLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKI 111
Query: 127 ADVNKL 132
D+ ++
Sbjct: 112 VDLPRI 117
>gi|219888705|gb|ACL54727.1| unknown [Zea mays]
gi|413951287|gb|AFW83936.1| hypothetical protein ZEAMMB73_670408 [Zea mays]
Length = 144
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 67/79 (84%), Gaps = 5/79 (6%)
Query: 73 MPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKL 132
MPGMTGYDLL+++K S+SLKDIPVVIMSSEN+P+RI+RCL++GAEEFFLKPV+ AD+ KL
Sbjct: 1 MPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVKPADMKKL 60
Query: 133 KPHLMKGISKEIKEPNNIN 151
K HL+K K+PN N
Sbjct: 61 KSHLLKR-----KQPNQKN 74
>gi|87116400|dbj|BAE79359.1| typeA response regulator 13 [Oryza sativa Japonica Group]
Length = 121
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 86/126 (68%), Gaps = 10/126 (7%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S HVL VDD+ +DR +I L + +VTAV+S +AL FL D + + VN+
Sbjct: 2 SSPHVLVVDDTHVDRHVISMALMRHNVRVTAVESVMQALVFL-----DSEHD-----VNM 51
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
I++DYCMP MTGYDLL ++K+S L +PV+I SS+NIP RI +C + GA+++ LKPV++
Sbjct: 52 IVSDYCMPEMTGYDLLMEVKKSPRLVHLPVIIASSDNIPERIRKCFDGGAKDYILKPVKI 111
Query: 127 ADVNKL 132
ADV ++
Sbjct: 112 ADVPRI 117
>gi|27260981|dbj|BAC45098.1| putative response regulator [Oryza sativa Japonica Group]
gi|40253364|dbj|BAD05296.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273489|emb|CAI79412.1| Type A response regulator 8 [Oryza sativa Indica Group]
gi|87116396|dbj|BAE79357.1| typeA response regulator 8 [Oryza sativa Japonica Group]
gi|118790867|tpd|FAA00269.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 121
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 89/134 (66%), Gaps = 14/134 (10%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S HVL VDD+ +DR ++ L + +VTAV+S +AL FL D + + V++
Sbjct: 2 SSPHVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFL-----DSEHD-----VDM 51
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
I++DYCMP MTGY+LL ++K+S L +PVVI SS+NIP RI +CL+ GA+++ LKPV++
Sbjct: 52 IVSDYCMPDMTGYNLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKI 111
Query: 127 ADVNKLKPHLMKGI 140
DV P +MK I
Sbjct: 112 VDV----PRIMKYI 121
>gi|125561361|gb|EAZ06809.1| hypothetical protein OsI_29053 [Oryza sativa Indica Group]
Length = 185
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 85/123 (69%), Gaps = 10/123 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVL VDD+ +DR ++ L + +VTAV+S +AL FL D + + V++I++
Sbjct: 69 HVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFL-----DSEHD-----VDMIVS 118
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
DYCMP MTGY+LL ++K+S +L +PVVI S+NIP RI +CL+ GA+++ LKPV++ DV
Sbjct: 119 DYCMPDMTGYNLLMEVKKSPTLAHLPVVIAFSDNIPERIRKCLDGGAKDYILKPVKIVDV 178
Query: 130 NKL 132
++
Sbjct: 179 PRI 181
>gi|94966174|emb|CAJ29968.1| response regulator [Zea mays]
gi|413922105|gb|AFW62037.1| response regulator [Zea mays]
Length = 124
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 85/134 (63%), Gaps = 10/134 (7%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
M T S HVL VD S +D + +L + + +VT +ALEFL + NS V
Sbjct: 1 MATQSP-HVLVVDHSRVDCLVASIVLNSFNIRVTVAGGAMEALEFL------DANNSHV- 52
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+LI+TDYCMP MTGYDLLR++KES LK IPVVI ++ IP RI C E GAEE+ +K
Sbjct: 53 --DLILTDYCMPDMTGYDLLREVKESPRLKHIPVVITCTDVIPERIIECFEGGAEEYMIK 110
Query: 123 PVQLADVNKLKPHL 136
P++++DV ++ ++
Sbjct: 111 PLKVSDVPRILSYM 124
>gi|94966176|emb|CAJ29969.1| response regulator [Zea mays]
Length = 124
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 84/134 (62%), Gaps = 10/134 (7%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
M T S HVL VD S +D + +L + + +VT +ALEFL + NS V
Sbjct: 1 MATQSP-HVLVVDHSRVDCLVASIVLNSFNIRVTVAGGAMEALEFL------DANNSHV- 52
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+LI+TDYCMP MTGYDLLR++KES LK IPVV ++ IP RI C E GAEE+ +K
Sbjct: 53 --DLILTDYCMPDMTGYDLLREVKESPRLKHIPVVXTCTDVIPERIIECFEGGAEEYMIK 110
Query: 123 PVQLADVNKLKPHL 136
P++++DV ++ ++
Sbjct: 111 PLKVSDVPRILSYM 124
>gi|37956247|gb|AAP32005.1| putative two-component system response regulator [Populus tremula x
Populus alba]
Length = 74
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 64/74 (86%), Gaps = 2/74 (2%)
Query: 72 CMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNK 131
CMPGMTGY+LL+KIKES+S ++IPVVIMSSEN+ +RI+RCLEEGAEEF KPV+L+DV +
Sbjct: 1 CMPGMTGYELLKKIKESSSFREIPVVIMSSENVMARIDRCLEEGAEEFIAKPVKLSDVKR 60
Query: 132 LKPHLMKGISKEIK 145
L+ + M S+E++
Sbjct: 61 LRDYYMA--SREVR 72
>gi|32479678|emb|CAE02513.1| P0076O17.11 [Oryza sativa Japonica Group]
Length = 108
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 74/105 (70%), Gaps = 9/105 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTS----SYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
VL VDDS +DR++++ LL +S S+ V AVDS KA+EFLGL E ++ ++
Sbjct: 9 RVLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQ-----AID 63
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
+++TDYCMP MTGY+LL+ IK + LK IPV++MSSEN P RI+R
Sbjct: 64 MVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISR 108
>gi|357471533|ref|XP_003606051.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355507106|gb|AES88248.1| Two-component response regulator ARR9 [Medicago truncatula]
Length = 153
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/69 (78%), Positives = 60/69 (86%), Gaps = 2/69 (2%)
Query: 87 ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMKGISKEIKE 146
ES SLKDIPVVIMSSEN+PSRINRCLEEGAEEFFLKPVQ +DVNKLKPHL+K +K E
Sbjct: 77 ESNSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLK--TKVKNE 134
Query: 147 PNNINNKRK 155
+ INNKR+
Sbjct: 135 DDLINNKRR 143
>gi|357463579|ref|XP_003602071.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355491119|gb|AES72322.1| Two-component response regulator ARR9 [Medicago truncatula]
Length = 128
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 20/98 (20%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI----- 62
FHVLAVDDS+IDR L+ERLL+ SS +VT VDSG+KAL++LG LN DE ++++
Sbjct: 21 HFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLG-LNIDEISSTKSSILESS 79
Query: 63 --------------QVNLIITDYCMPGMTGYDLLRKIK 86
+VNLI+TDYCMPGM+GYDLL+++K
Sbjct: 80 SPSLPQPLQLQEGNKVNLIMTDYCMPGMSGYDLLKRVK 117
>gi|223942921|gb|ACN25544.1| unknown [Zea mays]
gi|413918402|gb|AFW58334.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 179
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 5/89 (5%)
Query: 45 LEFLGLLNEDEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENI 104
+EFLGL + E+ V++++TDYCMP MTGYDLL+ IK L+ IPVV+MSSE+
Sbjct: 1 MEFLGLKDGGEEQ-----AVDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDE 55
Query: 105 PSRINRCLEEGAEEFFLKPVQLADVNKLK 133
P RI+RCL GAE+F +KP+Q DV +L+
Sbjct: 56 PQRISRCLSAGAEDFIVKPLQSKDVQRLR 84
>gi|27260986|dbj|BAC45103.1| response regulator-like protein [Oryza sativa Japonica Group]
gi|125603232|gb|EAZ42557.1| hypothetical protein OsJ_27123 [Oryza sativa Japonica Group]
Length = 167
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 73/105 (69%), Gaps = 10/105 (9%)
Query: 28 LKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKE 87
L S +VTAV+S +AL FL D + + VN+I++DYCMP MTGYDLL ++K+
Sbjct: 69 LARRSIRVTAVESVMQALMFL-----DSEHD-----VNMIVSDYCMPDMTGYDLLMEVKK 118
Query: 88 SASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKL 132
S L +PVVI SS+NIP RI +CL+ GA+++ LKPV++ D+ ++
Sbjct: 119 SPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVDLPRI 163
>gi|125561365|gb|EAZ06813.1| hypothetical protein OsI_29056 [Oryza sativa Indica Group]
Length = 167
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 73/105 (69%), Gaps = 10/105 (9%)
Query: 28 LKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKE 87
L S +VTAV+S +AL FL D + + VN+I++DYCMP MTGYDLL ++K+
Sbjct: 69 LARRSIRVTAVESVMQALMFL-----DSEHD-----VNMIVSDYCMPDMTGYDLLMEVKK 118
Query: 88 SASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKL 132
S L +PVVI SS+NIP RI +CL+ GA+++ LKPV++ D+ ++
Sbjct: 119 SPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVDLPRI 163
>gi|449529439|ref|XP_004171707.1| PREDICTED: two-component response regulator ARR8-like, partial
[Cucumis sativus]
Length = 109
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 65/87 (74%), Gaps = 12/87 (13%)
Query: 12 LAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNED------------EQTNS 59
LAVDDS+IDRKL+E+LL SS QVT V+SG+KAL +LGLL+ D + +
Sbjct: 23 LAVDDSLIDRKLLEKLLTISSCQVTCVESGDKALRYLGLLDHDLDPFSSSSFSSSQLSQH 82
Query: 60 QVIQVNLIITDYCMPGMTGYDLLRKIK 86
Q ++VNLI+TD+CMPGM+GYDLL+++K
Sbjct: 83 QEVKVNLIMTDFCMPGMSGYDLLKRLK 109
>gi|413924848|gb|AFW64780.1| hypothetical protein ZEAMMB73_536209 [Zea mays]
Length = 122
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 60/70 (85%), Gaps = 2/70 (2%)
Query: 76 MTGYDLLRKIKESASLKDIPVVIMSSENIPSRIN--RCLEEGAEEFFLKPVQLADVNKLK 133
M GYDLLRK+K+S+SL+DIPVVIMSSEN PSRIN RCLEEGA+E FLKPV+L+D++ +K
Sbjct: 1 MPGYDLLRKVKDSSSLRDIPVVIMSSENNPSRINRTRCLEEGADESFLKPVRLSDMSNIK 60
Query: 134 PHLMKGISKE 143
H++K +E
Sbjct: 61 LHILKSRCRE 70
>gi|297726345|ref|NP_001175536.1| Os08g0358800 [Oryza sativa Japonica Group]
gi|38637522|dbj|BAD03775.1| putative response regulator [Oryza sativa Japonica Group]
gi|118790937|tpd|FAA00272.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125603143|gb|EAZ42468.1| hypothetical protein OsJ_27037 [Oryza sativa Japonica Group]
gi|255678389|dbj|BAH94264.1| Os08g0358800 [Oryza sativa Japonica Group]
Length = 135
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 71/99 (71%), Gaps = 10/99 (10%)
Query: 34 QVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKD 93
+VTAV+S +AL FL D + + VN+I++DYCMP MTGYDLL ++K+S L
Sbjct: 43 RVTAVESVMQALVFL-----DSEHD-----VNMIVSDYCMPEMTGYDLLMEVKKSPRLVH 92
Query: 94 IPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKL 132
+PV+I SS+NIP RI +C + GA+++ LKPV++ADV ++
Sbjct: 93 LPVIIASSDNIPERIRKCFDGGAKDYILKPVKIADVPRI 131
>gi|15225720|ref|NP_178754.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|4309766|gb|AAD15535.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330250959|gb|AEC06053.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 136
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 69/123 (56%), Gaps = 37/123 (30%)
Query: 87 ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMK-GISKEIK 145
ESA+ + I VVIMSSEN+P+RI+RCLE+GAEEFFLKPV+L D KLKPH+MK + KE +
Sbjct: 9 ESAAFRSIHVVIMSSENVPTRISRCLEKGAEEFFLKPVKLVDHTKLKPHMMKTKLKKESE 68
Query: 146 EPNNI------------------------------------NNKRKGLEEIDSADRTRTR 169
+P I +NKRK +EE+ S DR R +
Sbjct: 69 KPVAIEEIVVSKPEIEEESLVIDILPLHQEVESEQLEPMLSSNKRKAMEEVISTDRPRPK 128
Query: 170 LND 172
ND
Sbjct: 129 YND 131
>gi|222623065|gb|EEE57197.1| hypothetical protein OsJ_07146 [Oryza sativa Japonica Group]
Length = 158
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+++++TDYCMP MTGYDLL+ IK S IPVV+MSSEN P RI+RCL GAE+F LKP
Sbjct: 30 IDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSSENEPQRISRCLTAGAEDFILKP 89
Query: 124 VQLADVNKLK 133
+++ DV +L+
Sbjct: 90 LKMNDVQRLR 99
>gi|413918401|gb|AFW58333.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 170
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
V++++TDYCMP MTGYDLL+ IK L+ IPVV+MSSE+ P RI+RCL GAE+F +KP
Sbjct: 6 VDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKP 65
Query: 124 VQLADVNKLK 133
+Q DV +L+
Sbjct: 66 LQSKDVQRLR 75
>gi|413918400|gb|AFW58332.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 168
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
V++++TDYCMP MTGYDLL+ IK L+ IPVV+MSSE+ P RI+RCL GAE+F +KP
Sbjct: 4 VDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKP 63
Query: 124 VQLADVNKLK 133
+Q DV +L+
Sbjct: 64 LQSKDVQRLR 73
>gi|222640462|gb|EEE68594.1| hypothetical protein OsJ_27121 [Oryza sativa Japonica Group]
Length = 123
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 59/77 (76%), Gaps = 4/77 (5%)
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
V++I++DYCMP MTGY+LL ++K+S L +PVVI SS+NIP RI +CL+ GA+++ LKP
Sbjct: 51 VDMIVSDYCMPDMTGYNLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKP 110
Query: 124 VQLADVNKLKPHLMKGI 140
V++ DV P +MK I
Sbjct: 111 VKIVDV----PRIMKYI 123
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 10/137 (7%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV 61
G VT S HVL VDD I R + LL+ Y+VT +SG +ALE L +
Sbjct: 23 GPVTTSDVHVLVVDDERICRTVTSSLLRRCGYRVTMAESGEEALELL----------RRG 72
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
+ ++++TD MPG+ G LL+ ++ L+D+PVV+MS+ + RC++ GAE++ L
Sbjct: 73 TEFHMLLTDVMMPGIDGPALLQIVRNDERLRDMPVVMMSANEHSDTVFRCIQHGAEDYLL 132
Query: 122 KPVQLADVNKLKPHLMK 138
KPV V + H+ +
Sbjct: 133 KPVSRRAVKHMWTHVWR 149
>gi|145351734|ref|XP_001420222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580455|gb|ABO98515.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 145
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV 61
G S HVL VDD I R + LL+ Y+VT +SG +ALE L +
Sbjct: 16 GPTATSDVHVLVVDDERICRTVTSSLLRKCGYRVTTAESGEEALELL----------RRG 65
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
+ +L++TD MPG+ G LL+ ++ L+D+PV++MS+ + RC++ GAE++ L
Sbjct: 66 TEFHLLLTDVMMPGIDGPALLQIVRNDERLRDMPVIMMSANEHSDTVFRCIQYGAEDYLL 125
Query: 122 KPVQLADVNKLKPHLMK 138
KPV V + H+ +
Sbjct: 126 KPVSRKAVKHMWQHVWR 142
>gi|242081263|ref|XP_002445400.1| hypothetical protein SORBIDRAFT_07g015390 [Sorghum bicolor]
gi|241941750|gb|EES14895.1| hypothetical protein SORBIDRAFT_07g015390 [Sorghum bicolor]
Length = 141
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 79/132 (59%), Gaps = 10/132 (7%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
M +T++ VL V++ +D + LL+ + QV AV +ALE LLN +
Sbjct: 16 MTTITNNSPWVLIVENCQVDYFVTSYLLRGHNVQVIAVQGPLQALE---LLNAEHN---- 68
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
V LI+++Y MP MTGYDLL ++K+S L +PVVI S + P + +CL+ GA+++
Sbjct: 69 ---VKLILSNYWMPNMTGYDLLMEMKKSPKLSHLPVVITSFDKSPEVVKKCLDGGAKDYI 125
Query: 121 LKPVQLADVNKL 132
+KP++ ADV ++
Sbjct: 126 IKPIKHADVPRI 137
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 86.3 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S HVL VDD + R ++ LL Y+VT+ G +AL L S L
Sbjct: 46 SSCHVLLVDDERLTRTVLSSLLLKCGYRVTSASDGLEALRLL--------RGSAPDTFQL 97
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
++TD CMP + G LL +K+ A+L+ +PVV+MSS + + C+++GAEE+ +KPV
Sbjct: 98 VLTDVCMPELNGIQLLSCVKQDANLRAVPVVMMSSVDQEETVAECVQQGAEEYLVKPVTK 157
Query: 127 ADVNKLKPHLMK 138
+V + H+ +
Sbjct: 158 KEVQHIWQHVWR 169
>gi|449529114|ref|XP_004171546.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 127
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 45/52 (86%)
Query: 91 LKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMKGISK 142
KDIPVV+MSSEN PSRIN CLEEGAEEF LKP+QL+DV KL+PHL K +++
Sbjct: 4 WKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSDVKKLEPHLQKSLTR 55
>gi|413915888|gb|AFW55820.1| hypothetical protein ZEAMMB73_931489 [Zea mays]
Length = 157
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV 61
+ T++ FHVLAVDDS+ DRKLIERLLKTSS+QVT VDSG+KAL+FLGL ++D
Sbjct: 62 AVATETPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPP-- 119
Query: 62 IQVNLIITDYCMPGMTGYDLL 82
+ + ++ +P + Y+L+
Sbjct: 120 VHTHQLVRRRWLPLPSSYELV 140
>gi|414586308|tpg|DAA36879.1| TPA: aberrant phyllotaxy1 [Zea mays]
Length = 148
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 10/77 (12%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVLAVDDS +DR +I +L++S ++VTAVDSG +ALE LG + N V++IIT
Sbjct: 17 HVLAVDDSSVDRAVIAGILRSSQFRVTAVDSGKRALELLGT-----EPN-----VSMIIT 66
Query: 70 DYCMPGMTGYDLLRKIK 86
DY MP MTGY+LL+KIK
Sbjct: 67 DYWMPEMTGYELLKKIK 83
>gi|302854384|ref|XP_002958700.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
gi|300255940|gb|EFJ40220.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
Length = 124
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+FHVL V+D + K +E+LL+ +Y+VT +G +A++ L ++V+LI
Sbjct: 2 EFHVLLVEDDRVTLKTVEQLLRKCNYKVTCAANGREAIKVLTACRHSG------VKVDLI 55
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+TD MP +TG+DL+ ++ + D+PVV+MSS++ + + + GA ++ +KP++
Sbjct: 56 LTDILMPEVTGFDLINEVVHGDTFCDVPVVVMSSQDSQENVLQAFQAGAADYLIKPIRKN 115
Query: 128 DVNKLKPHL 136
++ L H+
Sbjct: 116 ELATLWQHV 124
>gi|226875187|gb|ACO88941.1| cytokinin A-type response regulator 1 [Vitis vinifera]
Length = 65
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 52/59 (88%)
Query: 80 DLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMK 138
+LL+KIKES++ ++ PVVIMSSENI +RI+RCLEEGAE+F +KPV+L+DV +LK ++ +
Sbjct: 1 ELLKKIKESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPVKLSDVKRLKDYMTR 59
>gi|386829043|ref|ZP_10116150.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Beggiatoa alba B18LD]
gi|386429927|gb|EIJ43755.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Beggiatoa alba B18LD]
Length = 120
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 15/127 (11%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS D L++ +L++ YQ + +G + ++ ++ I+ NLII
Sbjct: 3 HILIVDDSPTDAYLVKNILESQGYQTSEASNGEEGIQ-----------KAKEIKPNLIIM 51
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ---- 125
D MPG+ G+ RKI +S K IPV+I+SS+++ S L +GA+EF +KPV+
Sbjct: 52 DVVMPGLNGFQATRKITKSEDTKSIPVIIVSSKDMESDRAWGLMQGAKEFLVKPVKQAEL 111
Query: 126 LADVNKL 132
LA V KL
Sbjct: 112 LATVKKL 118
>gi|290973017|ref|XP_002669246.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
gi|284082791|gb|EFC36502.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
Length = 842
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 10/116 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD + R+++ +LL+ +QV AV+ G +ALE L +E N +L++ D
Sbjct: 92 VLVVDDDRVARQVLTKLLEQLGFQVKAVEGGKQALEVL----REEGNN-----YHLLLVD 142
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
MP M G LL+ +++ S +D+P++++SS P IN+C + GAE+F KPVQL
Sbjct: 143 VLMPDMDGLQLLKIFRQAYS-EDMPIIMVSSSEDPDTINQCFQSGAEDFLQKPVQL 197
>gi|288573489|ref|ZP_06391846.1| response regulator receiver modulated diguanylate cyclase
[Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569230|gb|EFC90787.1| response regulator receiver modulated diguanylate cyclase
[Dethiosulfovibrio peptidovorans DSM 11002]
Length = 459
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 11/112 (9%)
Query: 14 VDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCM 73
V+DS+ K +ERLL++ Y+VT +G LE G ++ ++ITD M
Sbjct: 17 VEDSLTQAKRLERLLRSHGYEVTVARNGALGLEMAG-----------KVKPTVVITDVMM 65
Query: 74 PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
P M GY++ RKIK+ LKDIPVVI++S + P + + L+ GA+ F KP Q
Sbjct: 66 PEMDGYEMCRKIKDDPELKDIPVVILTSLSDPGDVIKGLQCGADNFLTKPYQ 117
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 10/138 (7%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
M + + HVL VDD + R L+ +LK +YQVT SG +A+ L +
Sbjct: 1 MASSSPADVHVLLVDDDRVCRTLVAGMLKKCNYQVTTASSGEEAMALL----------ER 50
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
Q NL++TD MP + G LL ++ + +++PVV+MSS + C+ GAE++
Sbjct: 51 GTQFNLLLTDVMMPDVDGPTLLHYVRNNPFYQEMPVVMMSSNEHADTVMNCIRLGAEDYL 110
Query: 121 LKPVQLADVNKLKPHLMK 138
LKPV V + H+ +
Sbjct: 111 LKPVTKKAVKHMWAHVWR 128
>gi|238011048|gb|ACR36559.1| unknown [Zea mays]
Length = 154
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 46/61 (75%)
Query: 73 MPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKL 132
MP MTGYDLL+ IK +S IPVV+MSSEN P RI+RCL GAE+F LKP++ DV +L
Sbjct: 1 MPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLTAGAEDFILKPLKTKDVQRL 60
Query: 133 K 133
+
Sbjct: 61 R 61
>gi|357167771|ref|XP_003581325.1| PREDICTED: two-component response regulator ARR4-like
[Brachypodium distachyon]
Length = 81
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%), Gaps = 10/77 (12%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+V+AVDDS +DR +I LL+ S Y+VTAVDSG +ALE L D + N V++IIT
Sbjct: 7 YVMAVDDSSVDRAVITALLRRSKYKVTAVDSGKRALEIL-----DSEPN-----VSMIIT 56
Query: 70 DYCMPGMTGYDLLRKIK 86
DY MP MTGY+LL+KIK
Sbjct: 57 DYWMPEMTGYNLLKKIK 73
>gi|452853162|ref|YP_007494846.1| Response regulator receiver modulated diguanylate cyclase
[Desulfovibrio piezophilus]
gi|451896816|emb|CCH49695.1| Response regulator receiver modulated diguanylate cyclase
[Desulfovibrio piezophilus]
Length = 419
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 10/127 (7%)
Query: 12 LAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDY 71
L VDDS R I RLLKT YQV +GN+ALE LG E + LI++DY
Sbjct: 133 LVVDDSKTMRDSIVRLLKTQLYQVFEAGNGNEALEVLGANPE----------IKLIVSDY 182
Query: 72 CMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNK 131
MP M G++L+++++E+ S D+ ++ MS+ + P + L+ GA +F KP Q+ + +
Sbjct: 183 EMPEMDGFELIKRVRETYSKNDLAIIGMSAMDAPLLSAQLLKTGANDFVSKPFQVEEFHS 242
Query: 132 LKPHLMK 138
H M+
Sbjct: 243 RVSHSME 249
>gi|414888254|tpg|DAA64268.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 177
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 77/130 (59%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+VL V+ R+++ LL+ YQV + ++G +A +L ED++ N ++L++
Sbjct: 51 LNVLLVESDDSTRQVVSALLRCCMYQVISAENGQQAWAYL----EDKRNN-----IDLVL 101
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MPG++G LL +I K+IPV++MSS + S + +CL +GA +F +KP++ +
Sbjct: 102 TEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSSDAMSTVFKCLSKGAVDFLVKPIRKNE 161
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 162 LKNLWQHVWR 171
>gi|87118378|ref|ZP_01074277.1| Response regulator receiver [Marinomonas sp. MED121]
gi|86166012|gb|EAQ67278.1| Response regulator receiver [Marinomonas sp. MED121]
Length = 301
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 73/121 (60%), Gaps = 9/121 (7%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T+++ H+LAVDD I+ +++E L S YQVT S N+A ++L TN+ Q
Sbjct: 1 MTNNRPHLLAVDDEEINLRILEHYLSDSDYQVTFAQSSNQAWDYL--------TNADY-Q 51
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
++++ D+ MP + G +LL+K KE + K +P +++S + PS I++ L GA + KP
Sbjct: 52 FDVLLLDWVMPDVDGLELLKKAKELENYKHVPAIMISGLSAPSAISKGLNAGAFYYLTKP 111
Query: 124 V 124
+
Sbjct: 112 L 112
>gi|310639938|ref|YP_003944696.1| sensor protein [Paenibacillus polymyxa SC2]
gi|309244888|gb|ADO54455.1| Sensor protein [Paenibacillus polymyxa SC2]
Length = 1046
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 76/130 (58%), Gaps = 13/130 (10%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
V + + VLAVDD ++ +++E LL + V AVD +AL+ L N + +
Sbjct: 708 VRNVPYRVLAVDDDGVNLRVLEELLYATGCSVVAVDHAEEALQLL---------NGRA-R 757
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+L+ITD+ MP M+G +L R+I+E SL ++PV+++++ ++P I+ GA +F KP
Sbjct: 758 FDLVITDWMMPEMSGIELCRRIREGYSLSELPVLLLTARDLPGDIHAGFMAGANDFLRKP 817
Query: 124 VQLADVNKLK 133
V D +LK
Sbjct: 818 V---DAEELK 824
>gi|354581917|ref|ZP_09000820.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
lactis 154]
gi|353200534|gb|EHB65994.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
lactis 154]
Length = 1038
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 44/204 (21%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDD ++ +++E +L T Y +T SG +AL LL+ E +L+IT
Sbjct: 710 HLLIVDDDPVNLRVLEAILPTGEYDLTMATSGKEAL---ALLDRKEW--------DLVIT 758
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP M+GY+L R+I+E +L ++P++++++ + P+ I GA ++ KPV+ ++
Sbjct: 759 DIMMPQMSGYELTRRIRERFTLTELPILLLTARSQPNDIQSGFMAGANDYVTKPVEALEI 818
Query: 130 N--------------------------KLKPHLMKGISKEIKEPNNI--NNKRKGLEEID 161
+++PH + I + I + R LEE
Sbjct: 819 RSRIQALTTIKQTVREQLRLEAAWLQAQIQPHFLFNALNAITALSGIDLDKMRDLLEEFS 878
Query: 162 SADRTRTRLNDTIDINNDGLPDLE 185
R+R R DT DGL +E
Sbjct: 879 HFLRSRFRFQDT-----DGLVPIE 897
>gi|308067232|ref|YP_003868837.1| regulator of cell autolysis [Paenibacillus polymyxa E681]
gi|305856511|gb|ADM68299.1| Putative regulator of cell autolysis [Paenibacillus polymyxa E681]
Length = 1039
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 13/125 (10%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+ VLAVDD ++ +++E LL T+ V AVD +AL L N + + +L+I
Sbjct: 705 YKVLAVDDDEVNLRVLEELLYTTGCSVVAVDHAEEALHML---------NGRT-RFDLVI 754
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TD+ MP M+G +L R+I+E SL ++PV+++++ ++P I GA +F KPV D
Sbjct: 755 TDWMMPEMSGIELCRRIRERYSLSELPVLLLTARDLPGDIRAGFMAGANDFLRKPV---D 811
Query: 129 VNKLK 133
+LK
Sbjct: 812 AEELK 816
>gi|384246881|gb|EIE20369.1| CheY-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 129
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 8/129 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDD + R ++ LL+ SY+VT SG +ALE L + T S LI+T
Sbjct: 6 HILLVDDERLSRVVVGNLLRKCSYKVTEAGSGMEALEIL--RGQPPGTFS------LILT 57
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP + G +LLR ++ + ++PV++MS+ + C+ GAE++ LKPV +V
Sbjct: 58 DVMMPDVDGIELLRHVRGDEAWSNLPVIMMSANERTETVFECIRGGAEDYLLKPVTKKEV 117
Query: 130 NKLKPHLMK 138
+ H+ +
Sbjct: 118 QHMWQHVWR 126
>gi|254283593|ref|ZP_04958561.1| adenylate/guanylate cyclase [gamma proteobacterium NOR51-B]
gi|219679796|gb|EED36145.1| adenylate/guanylate cyclase [gamma proteobacterium NOR51-B]
Length = 479
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 67/113 (59%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+LAVDD +R+LI RLL S + V +SG +ALE LG + V++++ D
Sbjct: 127 ILAVDDMPENRELISRLLHRSGHTVITAESGEEALELLG-----------TMAVDVVLLD 175
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MPG+ G ++LR++K+ L+ PVV++S +I C++ GA+++ LKP
Sbjct: 176 LMMPGIGGAEVLRRLKDDPELRATPVVMISGRQDMQQIIGCIQAGADDYLLKP 228
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVL VDD I R + ++L+ Y+VT +SG +A+E L + + NL++T
Sbjct: 52 HVLVVDDERICRAVTSQVLRKCGYRVTTCESGAEAIELL----------RRGTEFNLLLT 101
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP + G LL+ ++ + +PV++MS+ + C+ GA+++ LKPV + V
Sbjct: 102 DVMMPDIDGPKLLQHVRHHSQFSQLPVIMMSANQHSEIVFECVRSGADDYLLKPVTVKQV 161
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 162 KLLWQHVWR 170
>gi|22298565|ref|NP_681812.1| two-component hybrid sensor & regulator [Thermosynechococcus
elongatus BP-1]
gi|22294745|dbj|BAC08574.1| two-component hybrid sensor & regulator [Thermosynechococcus
elongatus BP-1]
Length = 871
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
VL VDDSI R+L++R+L+ + Y V G +AL+FL + QV+L+IT
Sbjct: 741 QVLIVDDSITVRRLLDRVLRQAGYNVVQCRDGKEALDFLLAAGD---------QVSLVIT 791
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP + GYDLL I+ SA L+ +PV +++S + + L+ GA + KP Q +
Sbjct: 792 DIEMPRLDGYDLLEAIRLSARLRHLPVAMLTSRGGDTHRQKALQLGANGYITKPFQPQGI 851
Query: 130 NKLKPHLMKG 139
+ L+ G
Sbjct: 852 LQTVTQLLTG 861
>gi|386039129|ref|YP_005958083.1| hypothetical protein PPM_0439 [Paenibacillus polymyxa M1]
gi|343095167|emb|CCC83376.1| hypothetical protein PPM_0439 [Paenibacillus polymyxa M1]
Length = 1046
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 13/130 (10%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
V + + VLAVDD ++ +++E LL + V AVD +AL+ L N + +
Sbjct: 708 VRNVPYRVLAVDDDGVNLRVLEELLYATGCSVVAVDHAEEALQLL---------NGRA-R 757
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+L+ITD+ MP M+G L R+I+E SL ++PV+++++ ++P I+ GA +F KP
Sbjct: 758 FDLVITDWMMPEMSGIGLCRRIREGYSLSELPVLLLTARDLPGDIHAGFMAGANDFLRKP 817
Query: 124 VQLADVNKLK 133
V D +LK
Sbjct: 818 V---DAEELK 824
>gi|84570631|dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 76/128 (59%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ SY+VTAV +G +A +FL L+ + V++++T+
Sbjct: 79 VLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFLENLSNN---------VDIVLTE 129
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP +TG LL KI +LK IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 130 VVMPSLTGIGLLDKIMSHMTLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELK 189
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 190 NLWQHVWR 197
>gi|374603703|ref|ZP_09676679.1| two-component hybrid sensor and regulator [Paenibacillus
dendritiformis C454]
gi|374390674|gb|EHQ62020.1| two-component hybrid sensor and regulator [Paenibacillus
dendritiformis C454]
Length = 995
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
++ D H+LAVDD ++ ++ +L T Y +T V S + LE LG
Sbjct: 661 LLQDGNIHILAVDDDPVNLNVLVGILSTEPYTITTVQSAREVLELLG-----------TQ 709
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
Q +L+I D MP M+GY+L ++++E S+ ++P++++++ + P+ I GA ++ K
Sbjct: 710 QWDLLIADVMMPHMSGYELTQRVREHYSVSELPILLLTARSQPADIYTGFSAGANDYVTK 769
Query: 123 PV 124
PV
Sbjct: 770 PV 771
>gi|356539090|ref|XP_003538033.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR3-like [Glycine max]
Length = 792
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 76/128 (59%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+D R ++ LL+ SY+VTAV +G +A + L ED + ++L++T+
Sbjct: 92 VLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVL----EDPENG-----IDLVLTE 142
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI +LK+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 143 VAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELK 202
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 203 NLWQHVWR 210
>gi|302873857|ref|YP_003842490.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|307689897|ref|ZP_07632343.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|302576714|gb|ADL50726.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
Length = 366
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 84/153 (54%), Gaps = 13/153 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
M +SQ +L VDD+ + K++ +L+ Y + + SG +ALE + + I
Sbjct: 1 MKDNSQIKILVVDDTPFNIKIVSTILQEVGYNIYSTTSGREALEMV-----------KNI 49
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ NLI+ D MP M GY+++RK+K +DIP++ +++ + R +EGA ++ +K
Sbjct: 50 RFNLILLDVMMPEMDGYEVIRKLKNDEDTRDIPIIFLTARGDSESVVRAFDEGAYDYLIK 109
Query: 123 PVQLAD-VNKLKPHLMKGISKE-IKEPNNINNK 153
P + ++++K H+ ++E ++E N +K
Sbjct: 110 PFNPKELLSRVKTHIELKFARENLEEANKTKDK 142
>gi|359486449|ref|XP_002275645.2| PREDICTED: two-component response regulator-like PRR73 [Vitis
vinifera]
Length = 747
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R+++ LL+ SY+VTAV +G +A L D+ TN V+L++ +
Sbjct: 74 VLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSIL-----DDLTN----HVDLVLAE 124
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++G LL KI + K+IPV++MSS + + +CL +GA +FF+KP++ ++
Sbjct: 125 VALPSLSGIGLLCKIMNHKACKNIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELK 184
Query: 131 KLKPHLMKGISK 142
L H+ + +
Sbjct: 185 NLWQHVWRKFHR 196
>gi|328875568|gb|EGG23932.1| cAMP phosphodiesterase [Dictyostelium fasciculatum]
Length = 851
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 10/119 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S+ H+L VDD + RK++E LK Y VT V +G +A L N + +L
Sbjct: 179 SKVHILVVDDDQVQRKILESALKKFKYNVTVVTNGEEAWNILINGN---------TKYDL 229
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI-NRCLEEGAEEFFLKPV 124
++TD MP ++G+DLL++I + A +K++PV++MS I + N ++ G ++F KP+
Sbjct: 230 VLTDVMMPNISGFDLLQRINDHAEIKNVPVILMSGTAIDYKYANDTIKIGGQDFLTKPI 288
>gi|383141470|gb|AFG52076.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141472|gb|AFG52077.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141476|gb|AFG52079.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141486|gb|AFG52084.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 45/52 (86%)
Query: 87 ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMK 138
ES+ LK+IPVV+MSSEN+PSR RCL+EGAEEF LKPVQ++DV +L+ ++ +
Sbjct: 1 ESSKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLREYMSR 52
>gi|383141484|gb|AFG52083.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 45/52 (86%)
Query: 87 ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMK 138
ES+ LK+IPVV+MSSEN+PSR RCL+EGAEEF LKPVQ++DV +L+ ++ +
Sbjct: 1 ESSKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLREYMSR 52
>gi|297736458|emb|CBI25329.3| unnamed protein product [Vitis vinifera]
Length = 769
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R+++ LL+ SY+VTAV +G +A L D+ TN V+L++ +
Sbjct: 96 VLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSIL-----DDLTN----HVDLVLAE 146
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++G LL KI + K+IPV++MSS + + +CL +GA +FF+KP++ ++
Sbjct: 147 VALPSLSGIGLLCKIMNHKACKNIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELK 206
Query: 131 KLKPHLMKGISK 142
L H+ + +
Sbjct: 207 NLWQHVWRKFHR 218
>gi|356542579|ref|XP_003539744.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like PRR37-like [Glycine max]
Length = 777
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 76/128 (59%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+D R ++ LL+ SY+VTAV +G +A + L ED + ++L++T+
Sbjct: 75 VLLVEDDDSTRHVVRALLQNCSYKVTAVSNGLQAWKVL----EDPENG-----IDLVLTE 125
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI +LK+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 126 VAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELK 185
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 186 NLWQHVWR 193
>gi|383141480|gb|AFG52081.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 45/52 (86%)
Query: 87 ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMK 138
ES+ LK+IPVV+MSSEN+PSR RCL+EGAEEF LKPVQ++DV +L+ ++ +
Sbjct: 1 ESSKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLREYMSR 52
>gi|361066661|gb|AEW07642.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141474|gb|AFG52078.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141478|gb|AFG52080.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141482|gb|AFG52082.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141488|gb|AFG52085.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141490|gb|AFG52086.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141492|gb|AFG52087.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141494|gb|AFG52088.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141496|gb|AFG52089.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 45/52 (86%)
Query: 87 ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMK 138
ES+ LK+IPVV+MSSEN+PSR RCL+EGAEEF LKPVQ++DV +L+ ++ +
Sbjct: 1 ESSKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLREYMSR 52
>gi|386827265|ref|ZP_10114372.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Beggiatoa alba B18LD]
gi|386428149|gb|EIJ41977.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Beggiatoa alba B18LD]
Length = 127
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
M T + +L VDD I+ R +E LL++ YQ+ + G + L+ ++ I
Sbjct: 1 MQTQEKIPLLIVDDEIVSRSSLEALLESDEYQLFFAEDGAQGLD-----------KAESI 49
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
L+I D MPGM G+++ R+++ +A L IPV+++++ + P+ RCL+ GA + K
Sbjct: 50 HPVLMILDVMMPGMNGFEVCRRLRANAKLAQIPVIMITAWDDPTAKQRCLDVGANDVICK 109
Query: 123 PVQLADVN 130
P AD+
Sbjct: 110 PFNRADLQ 117
>gi|119505208|ref|ZP_01627283.1| adenylate cyclase PLUS two component hybrid sensor and regulator
[marine gamma proteobacterium HTCC2080]
gi|119458899|gb|EAW39999.1| adenylate cyclase PLUS two component hybrid sensor and regulator
[marine gamma proteobacterium HTCC2080]
Length = 482
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 69/113 (61%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+LAVDD +R+L+ RLL+ + + V + +SG +ALE L + V++++ D
Sbjct: 130 ILAVDDLPENRELVSRLLQKTGHTVISAESGEEALELLDTMG-----------VDVVLLD 178
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MPG+ G ++L+++KE L+ PVV++S + +I C+E GA+++ LKP
Sbjct: 179 LVMPGIGGAEVLKRLKEDERLRATPVVMISGQQDMDQIVMCIEAGADDYLLKP 231
>gi|334137368|ref|ZP_08510806.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
gi|333605141|gb|EGL16517.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
Length = 1040
Score = 76.6 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 72/123 (58%), Gaps = 13/123 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD ++ +++ LL Y++ AVD G KA+ +G + Q ++L+I D
Sbjct: 704 VLLVDDDPVNLQVLYNLLSVEGYRLIAVDGGAKAMAHIG--------SGQ--SIDLVIAD 753
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+ MPGM+G +L R I+ SL ++PV+++++ ++P + + GA +F KPV D +
Sbjct: 754 WMMPGMSGLELCRAIRARLSLAELPVLLLTARSLPEDVRTGFQAGANDFLRKPV---DAD 810
Query: 131 KLK 133
+L+
Sbjct: 811 ELR 813
>gi|355469068|gb|ACU42263.2| pseudo response regulator 37 [Pisum sativum]
Length = 792
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD R ++ LL+ Y+VTAV +G +A + L ED +++L++T+
Sbjct: 88 VLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKAL----EDPGN-----RIDLVLTE 138
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI +LK+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 139 VAMPFVSGIGLLCKIMSHIALKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELK 198
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 199 NLWQHVWR 206
>gi|255928914|gb|ACU42264.1| pseudo response regulator 37 [Pisum sativum]
Length = 780
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD R ++ LL+ Y+VTAV +G +A + L ED +++L++T+
Sbjct: 76 VLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKAL----EDPGN-----RIDLVLTE 126
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI +LK+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 127 VAMPFVSGIGLLCKIMSHIALKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELK 186
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 187 NLWQHVWR 194
>gi|281209703|gb|EFA83871.1| cAMP phosphodiesterase [Polysphondylium pallidum PN500]
Length = 665
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 71/119 (59%), Gaps = 10/119 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S+ H+L VDD I+ R L+ +LK ++ VT V +G +A + L N +V+ +L
Sbjct: 166 SKVHILVVDDDIVQRSLLNNMLKKFNFNVTLVTNGEEAWDTL--------LNGKVM-YDL 216
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI-NRCLEEGAEEFFLKPV 124
++TD MP +TG+DLL++I E +K IPV++MS + + N ++ G ++F KP+
Sbjct: 217 VLTDVMMPMVTGFDLLQRINEHIEIKHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPI 275
>gi|157374862|ref|YP_001473462.1| diguanylate cyclase [Shewanella sediminis HAW-EB3]
gi|157317236|gb|ABV36334.1| diguanylate cyclase [Shewanella sediminis HAW-EB3]
Length = 420
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL DDS++ RK + LL+ YQV D GN A E L N IQ L+ITD
Sbjct: 124 VLVADDSVVSRKFVRSLLEQHLYQVVEADDGNSAWEVL--------QNQPDIQ--LLITD 173
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
Y MPG+ G+ L+ K++E S +++ ++ +SS++ S R ++ GA +F KP
Sbjct: 174 YNMPGLDGFGLILKVREKFSREELAIIGLSSDDDESLSARFIKNGANDFLQKP 226
>gi|395497179|ref|ZP_10428758.1| putative sensory box GGDEF/EAL domain-containing protein
[Pseudomonas sp. PAMC 25886]
Length = 422
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD I RKL+E LL+ YQ + SG +AL+ + D LI+ D
Sbjct: 8 LLIVDDEIQVRKLLETLLRHEGYQTLSAASGEEALQLVARQPPD-----------LILLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MPGM GY++ ++K+ + +IP++++S+ + PS LE GAEEF KPV+
Sbjct: 57 IMMPGMDGYEVANQLKQDPTTANIPIIMLSALSEPSARLSGLENGAEEFISKPVE 111
>gi|404497561|ref|YP_006721667.1| response receiver histidine kinase [Geobacter metallireducens
GS-15]
gi|418065096|ref|ZP_12702471.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter metallireducens RCH3]
gi|78195163|gb|ABB32930.1| response receiver histidine kinase [Geobacter metallireducens
GS-15]
gi|373562728|gb|EHP88935.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter metallireducens RCH3]
Length = 414
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 22/168 (13%)
Query: 1 MGMVTD-SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS 59
MG T+ S ++L ++DS + +++T+ Y V + +G +AL L QT S
Sbjct: 1 MGATTEQSNGNILIIEDSPTQSAQLRHIMETNGYHVISACNGREALALL-----SGQTPS 55
Query: 60 QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEF 119
LII+D MPG+ GY+L R+IKE ++IPV++++S + P + R LE GA+ F
Sbjct: 56 ------LIISDVIMPGIDGYELCRRIKEREDSRNIPVILLTSLSDPHDVIRGLECGADNF 109
Query: 120 FLKPVQLADVNKLKPHLMKGISK--EIKEPNNINNKRKGLEEIDSADR 165
KP + HL+ +S E + P I R GLE + +R
Sbjct: 110 ITKPCN-------EKHLLSRVSYLLESRNPCQI-EARSGLEILFGGER 149
>gi|334715197|gb|AEG90654.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 291
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+VL V+ R+++ LL+ YQV + ++G +A +L ED+Q N +++++
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL----EDKQNN-----IDIVL 130
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
+ MPG++G LL +I K+IPV++MSS + + + +CL +GA +F + P++ +
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNE 190
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 191 LKNLWQHVWR 200
>gi|242278764|ref|YP_002990893.1| multi-sensor hybrid histidine kinase [Desulfovibrio salexigens DSM
2638]
gi|242121658|gb|ACS79354.1| multi-sensor hybrid histidine kinase [Desulfovibrio salexigens DSM
2638]
Length = 822
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 11/114 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L V+DS+ +E +L ++V+ V +G AL+ L ED+ V+L+I+
Sbjct: 5 HILVVEDSLTQAVKLEYILFEKGFKVSLVSNGENALQLL----EDKD-------VDLVIS 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D MPGM GY+L KI++++ KD+PV++++S + P I + L+ GA F KP
Sbjct: 54 DVVMPGMDGYELCEKIRKNSRYKDVPVILLTSLSEPGDIIKGLKSGATNFVTKP 107
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+++ +L V+D+ I+ + LL+ + V +G +A+ L I V+L
Sbjct: 575 AEYSILLVEDNPINVLVATSLLEKMGHSVEVASNGLEAVSML-----------SGIDVDL 623
Query: 67 IITDYCMPGMTGYDL---LRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
++ D MP M G+ +R+ + + +++P++ M++ + ++C + G ++ KP
Sbjct: 624 VLMDLEMPEMDGFSASMSIRRGRAGDAARNVPIIAMTAHAMTGVKDKCAKAGMNDYIAKP 683
Query: 124 VQLADVNKLKPHLMK---GISKEIKEPNNINNK 153
VQ D+ + MK G+ + EP I K
Sbjct: 684 VQYVDLRDVILRTMKENAGVPSVVSEPVTIEAK 716
>gi|408788802|ref|ZP_11200516.1| two component response regulator [Rhizobium lupini HPC(L)]
gi|408485240|gb|EKJ93580.1| two component response regulator [Rhizobium lupini HPC(L)]
Length = 440
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
++T+ QF VL VDD+ R + +L+ +++V+ SGN+ALE L +Q
Sbjct: 128 ILTNRQFSVLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEIL----------AQDP 177
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP M GY+L R+I++S S +D+ V+ +SS L+ GA +F +
Sbjct: 178 SIQLVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSASFLKAGASDFVYR 237
Query: 123 P 123
P
Sbjct: 238 P 238
>gi|424909943|ref|ZP_18333320.1| diguanylate cyclase (GGDEF) domain-containing protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392845974|gb|EJA98496.1| diguanylate cyclase (GGDEF) domain-containing protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 440
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
++T+ QF VL VDD+ R + +L+ +++V+ SGN+ALE L +Q
Sbjct: 128 ILTNRQFSVLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEIL----------AQDP 177
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP M GY+L R+I++S S +D+ V+ +SS L+ GA +F +
Sbjct: 178 SIQLVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSASFLKAGASDFVYR 237
Query: 123 P 123
P
Sbjct: 238 P 238
>gi|254459178|ref|ZP_05072600.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|373868639|ref|ZP_09605037.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|207084071|gb|EDZ61361.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|372470740|gb|EHP30944.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
Length = 639
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS + R +I LL+ + V + G AL +LN++ +NL+ITD
Sbjct: 127 ILVVDDSALFRLMISNLLRRHKFHVLEAEDGKIAL---NILNKNPD-------INLVITD 176
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
Y MP M G +L++ ++ + LKDIP++++SS + S I C++ GA ++ KP
Sbjct: 177 YEMPNMNGLELIKSVRNNHKLKDIPMIVISSVDAQSTIVDCMKHGANDYLHKP 229
>gi|357157434|ref|XP_003577797.1| PREDICTED: two-component response regulator-like PRR95-like,
partial [Brachypodium distachyon]
Length = 681
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R+++ LL+ Y+V AV G KA E + + +L++
Sbjct: 18 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVM---------RGRAYAFDLVL 68
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G DLL +I + K+IPV++MSS++ + RC++ GA +F +KPV+ +
Sbjct: 69 TEVDMPTLSGIDLLARIVAAHECKNIPVIMMSSQDSIGTVLRCMQNGAVDFLVKPVRKNE 128
Query: 129 VNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRT 168
+ L H+ + S + + NN +S +R++T
Sbjct: 129 LRNLWQHVWRRHSMNTQTNASENNAASNHISANSGNRSKT 168
>gi|113476924|ref|YP_722985.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110167972|gb|ABG52512.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 1207
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
+S+F +L VDD ++ L+ L +YQV ++G KAL+ L +Q +
Sbjct: 736 ESEFQILIVDDEPVNLTLLSNQLSLHNYQVIQANNGQKALDIL----------AQDFLPD 785
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
LI+ D MPGMTGY++ +K++E+ L +P+++++++N S + LE GA ++ KP
Sbjct: 786 LILLDVMMPGMTGYEVTQKVRETWLLHQLPIIMLTAKNRVSDLVMGLEVGANDYLSKPFH 845
Query: 126 LAD-VNKLKPHL 136
+ + ++K H+
Sbjct: 846 KKELLARIKTHI 857
>gi|328868868|gb|EGG17246.1| cAMP-specific phosphodiesterase [Dictyostelium fasciculatum]
Length = 842
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S H+L VDD I RK+++ LL Y VT V S +A L + +L
Sbjct: 143 SSIHILVVDDDITQRKVLQNLLSKVFYNVTLVSSAEEAWNMLIY---------GTTKFDL 193
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI-NRCLEEGAEEFFLKPV 124
++TD MP +TG+DLL++I E +K+IPV++MS + + N ++ G ++F KP+
Sbjct: 194 VLTDVMMPQVTGFDLLQRINEHPEIKNIPVILMSGTALDCKYANDTIKIGGQDFVTKPI 252
>gi|84570625|dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ SY+VTAV +G +A + L L+ + V++++T+
Sbjct: 79 VLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVLENLSNN---------VDIVLTE 129
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI +LK IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 130 VVMPSLSGIGLLDKIMSHITLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELK 189
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 190 NLWQHVWR 197
>gi|302782157|ref|XP_002972852.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
gi|300159453|gb|EFJ26073.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
Length = 639
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
Q VL V+D R ++ LL+ YQV +G +A L N +++L+
Sbjct: 41 QLKVLLVEDDDSTRHVVAALLRNCGYQVVPAANGLQAWSLLDDRNR---------EIDLV 91
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+TD MPG++G LL KI + + +PVV+MSS + + + +CL +GA +F +KPV+
Sbjct: 92 LTDVVMPGLSGLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFLVKPVRKN 151
Query: 128 DVNKLKPH 135
++ L H
Sbjct: 152 ELKNLWQH 159
>gi|159184597|ref|NP_354083.2| two component response regulator [Agrobacterium fabrum str. C58]
gi|159139899|gb|AAK86868.2| two component response regulator [Agrobacterium fabrum str. C58]
Length = 430
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
++T+ +F VL VDD+ R + +L+ +++V+ SGN+ALE L SQ
Sbjct: 118 IMTNKRFSVLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEIL----------SQDP 167
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP M GY+L R+I++S S +D+ V+ +SS L+ GA +F +
Sbjct: 168 SIQLVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSASFLKAGASDFVYR 227
Query: 123 P 123
P
Sbjct: 228 P 228
>gi|335036577|ref|ZP_08529902.1| two component response regulator [Agrobacterium sp. ATCC 31749]
gi|333791960|gb|EGL63332.1| two component response regulator [Agrobacterium sp. ATCC 31749]
Length = 430
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
++T+ +F VL VDD+ R + +L+ +++V+ SGN+ALE L SQ
Sbjct: 118 IMTNKRFSVLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEIL----------SQDP 167
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP M GY+L R+I++S S +D+ V+ +SS L+ GA +F +
Sbjct: 168 SIQLVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSASFLKAGASDFVYR 227
Query: 123 P 123
P
Sbjct: 228 P 228
>gi|357009921|ref|ZP_09074920.1| two-component hybrid sensor and regulator [Paenibacillus elgii B69]
Length = 998
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 69/119 (57%), Gaps = 11/119 (9%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
D + ++LAVDD ++ ++ +L + Y++T S + LE L D Q Q +
Sbjct: 664 DGRVNILAVDDDPVNLNVLVGILSSEPYRITTAHSAREVLELL-----DTQ------QWD 712
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
L+I D MP M+GY+L +K++E SL ++PV+++++ + P+ I + GA ++ KPV
Sbjct: 713 LLIADVMMPQMSGYELTQKVREQYSLSELPVLLLTARSQPADIYTGFKSGANDYVTKPV 771
>gi|428312366|ref|YP_007123343.1| PAS domain-containing protein [Microcoleus sp. PCC 7113]
gi|428253978|gb|AFZ19937.1| PAS domain S-box [Microcoleus sp. PCC 7113]
Length = 621
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 89/166 (53%), Gaps = 21/166 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD+ + KLI L+ S ++V SG KAL+ L + + D LI+ D
Sbjct: 33 ILLVDDTNANLKLISDFLRESGFKVRGAKSGWKALKILEITSPD-----------LILLD 81
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSS---ENIPSRINRCLEEGAEEFFLKPVQLA 127
MP M G++ R++KE KDIPV+ M++ + P + L GA ++ KP+QLA
Sbjct: 82 VVMPEMDGFETCRRLKEWDKTKDIPVIFMTAIADASHPEHKVQGLALGAVDYISKPIQLA 141
Query: 128 DV-NKLKPHL-MKGISKEIKEPN-----NINNKRKGLEEIDSADRT 166
+V ++K HL ++ ++K+++ N I +RK E++ +R
Sbjct: 142 EVLARVKTHLHLRFLTKQLQAQNAHLCAEIEVRRKTEEQLRLLERA 187
>gi|355469070|gb|ACU42265.2| pseudo response regulator 59 [Pisum sativum]
Length = 494
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL+ +Y+V AV G KA E L + +LI+
Sbjct: 45 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEIL---------KGRPRNFDLIL 95
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++GY LL I E + K IPV++MSS++ S + +C+ GA ++ +KP+++ +
Sbjct: 96 TEVDLPSVSGYALLSLIMEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINE 155
Query: 129 VNKLKPHLMKGISK 142
+ L H+ + S+
Sbjct: 156 LRNLWQHVWRRQSQ 169
>gi|434400628|ref|YP_007134632.1| response regulator receiver modulated serine phosphatase [Stanieria
cyanosphaera PCC 7437]
gi|428271725|gb|AFZ37666.1| response regulator receiver modulated serine phosphatase [Stanieria
cyanosphaera PCC 7437]
Length = 573
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 21/179 (11%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
+ + S+ +L VDD+ +R L+ R +K YQV +G + LE + Q
Sbjct: 167 ISLTNQSEGKILVVDDNPTNRDLLSRQIKAQGYQVGTAANGQQVLELI-----------Q 215
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+ +LI+ D MP M GY +L+ +++S + IPV+++S+ + + +C+E GAE++
Sbjct: 216 TGEYDLILLDIIMPEMDGYQVLKSLRDS-QWRYIPVIMISALDQIDSVVKCIEMGAEDYL 274
Query: 121 LKPVQLADVNKLKPHLMKG-ISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTIDINN 178
KP P L+K IS +++ + + + LE++ A++ T LN + N
Sbjct: 275 AKP--------FNPVLLKARISACLEKKRLRDQQARYLEQLAQANQEITNLNQRLQAEN 325
>gi|255928918|gb|ACU42266.1| pseudo response regulator 59 [Pisum sativum]
Length = 469
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R++I LL+ +Y+V AV G KA E L + +LI+T+
Sbjct: 22 VLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEIL---------KGRPRNFDLILTE 72
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++GY LL I E + K IPV++MSS++ S + +C+ GA ++ +KP+++ ++
Sbjct: 73 VDLPSVSGYALLSLIMEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELR 132
Query: 131 KLKPHLMKGISK 142
L H+ + S+
Sbjct: 133 NLWQHVWRRQSQ 144
>gi|300311026|ref|YP_003775118.1| chemotaxis response regulator receiver domain-containing protein
[Herbaspirillum seropedicae SmR1]
gi|300073811|gb|ADJ63210.1| chemotaxis response regulator receiver domain protein
[Herbaspirillum seropedicae SmR1]
Length = 134
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 12/129 (9%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSY-QVTAVDSGNKALEFLGLLNEDEQTNSQV 61
M TD H L VDD R++I LLK Y +VT D G A + L S
Sbjct: 1 MSTDQ--HFLVVDDFSTMRRIIIGLLKELEYLKVTDADDGTSAWKIL---------ESGA 49
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
+ ++ +ITD+ MPGM G LL+KI+E+ LK +PV+++S+E I E GA+ + +
Sbjct: 50 LPISFVITDWNMPGMDGLGLLKKIRETPRLKRLPVLMVSAEAKKENIVLAAETGADGYIV 109
Query: 122 KPVQLADVN 130
KP A ++
Sbjct: 110 KPFNAATLD 118
>gi|255582079|ref|XP_002531836.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223528532|gb|EEF30556.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 807
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 74/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ SY+V AV +G +A + L +N +L++T+
Sbjct: 76 VLLVENDDSTRHVVSALLRNCSYEVNAVANGFQAWKILEDMNN---------HTDLVLTE 126
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI+ +L++IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 127 VVMPILSGIGLLCKIRNHKTLRNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELK 186
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 187 NLWQHVWR 194
>gi|356509155|ref|XP_003523317.1| PREDICTED: two-component response regulator-like APRR9-like
[Glycine max]
Length = 655
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R++I LL+ SY+V AV G KA E L + V+LI+T+
Sbjct: 53 LVEADDST--RQIIAALLRKCSYKVVAVPDGLKAWELL---------KGRPHNVDLILTE 101
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++GY LL I E K+IPV++MSS++ S + +C+ GA ++ +KP++ ++
Sbjct: 102 VDLPSISGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELR 161
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 162 NLWQHVWR 169
>gi|60893116|gb|AAX37306.1| CheY [Desulfovibrio gigas]
Length = 123
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
++L VDDS R L+ +LK Y+VTA ++G LE L + QV+LII+
Sbjct: 5 NILIVDDSKTVRNLVAFILKKEGYKVTAAENGLDGLEKLYSME----------QVDLIIS 54
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G+ +R ++E +D+P+V++S+E I + L+ GA + +KP Q
Sbjct: 55 DINMPKMDGFTFIRHVREQVLYRDLPIVVLSTEGQEKDIQQGLQLGANLYMVKPAQ 110
>gi|427421156|ref|ZP_18911339.1| SpoIIE-like protein with response regulator receiver domain
[Leptolyngbya sp. PCC 7375]
gi|425757033|gb|EKU97887.1| SpoIIE-like protein with response regulator receiver domain
[Leptolyngbya sp. PCC 7375]
Length = 391
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 17/167 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L +DD + RKL++ +L+ QV DSG K LE Q I LI+ D
Sbjct: 8 ILLIDDDLFSRKLLQAMLQKVGCQVVEADSGEKGLELY-----------QKISPALILLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPGM G+D RKI++ IP+++++ + GA ++ KPVQ+ ++
Sbjct: 57 AKMPGMDGFDCCRKIRQLPEGGHIPILMVTGLEDQKSVEEAFAAGATDYVTKPVQMPILS 116
Query: 131 KLKPHLMKGIS--KEIKEPNNINNKRKGLEEIDSADRTRTRLNDTID 175
+L+K KEI+E +N+R LE +A+ L +T D
Sbjct: 117 GRVRYLLKAWQAEKEIRE----SNERFRLELSRAAEYVEALLPNTDD 159
>gi|145514664|ref|XP_001443237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410615|emb|CAK75840.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 14/150 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL +D+ I R + LL+ +YQV A ++G +A + L L E+E +LI+ D
Sbjct: 16 VLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDEL-LKTENE--------FDLILLD 66
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P MTG +LL+ IK LKD+PV++MS ++ + CL GAE++ +KPV +
Sbjct: 67 LGLPEMTGLELLQIIKAIDKLKDVPVIMMSGDDETETVAACLNAGAEDYMVKPVNFKKLQ 126
Query: 131 KLKPHLMKGISKEIKEPNNINNKRKGLEEI 160
L+ + K+ +P N N KG I
Sbjct: 127 GLQTFV-----KKKPKPRNSNQNEKGYYTI 151
>gi|354581874|ref|ZP_09000777.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
lactis 154]
gi|353200491|gb|EHB65951.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
lactis 154]
Length = 1056
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
D + +LAVDD ++ K++ +L + Y +T SG + LE LG+ D
Sbjct: 718 DGKASILAVDDDPVNLKVLLGILSSEPYHITTAVSGLEVLELLGMRTWD----------- 766
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
L+I D MP M+GY+L ++++E S+ ++P++++++ + P I GA ++ KPV
Sbjct: 767 LLIADVMMPQMSGYELTQRVREHYSVAELPILLLTARSQPEDIYTGFASGANDYMTKPV- 825
Query: 126 LADVNKLK 133
D +LK
Sbjct: 826 --DATELK 831
>gi|346992834|ref|ZP_08860906.1| two-component hybrid sensor and regulator [Ruegeria sp. TW15]
Length = 520
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD +R L+ R L+ +QV D G ALE L SQ +L++ D
Sbjct: 176 ILVVDDVEANRTLLARRLERDGHQVWTADGGYSALEKL----------SQH-AFDLVLLD 224
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP + GYD+L+++KE+ +DIPV+++S+ + + RC+E GAE++ KP
Sbjct: 225 LMMPDLNGYDVLKRLKENDDWRDIPVIMISAFDEIESVARCVEIGAEDYLPKP 277
>gi|222637749|gb|EEE67881.1| hypothetical protein OsJ_25707 [Oryza sativa Japonica Group]
Length = 661
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VD R+++ LL+ Y+V ++G +A +L ED Q + ++L++T+
Sbjct: 63 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL----EDMQNS-----IDLVLTE 113
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG++G LL +I K+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 114 VVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELK 173
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 174 NLWQHVWR 181
>gi|302872938|ref|YP_003841571.1| signal transduction histidine kinase LytS [Clostridium
cellulovorans 743B]
gi|307686548|ref|ZP_07628994.1| signal transduction histidine kinase, LytS [Clostridium
cellulovorans 743B]
gi|302575795|gb|ADL49807.1| signal transduction histidine kinase, LytS [Clostridium
cellulovorans 743B]
Length = 1028
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD II+ I +LK +Y +T V G A+E +L D+ +L+I D
Sbjct: 707 ILVVDDEIINLHSIANILKHENYDITCVADGESAIE---ILKRDKS-------FSLVILD 756
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
MP MTGY + + I+E+ +L ++P++++++ N P + + +EGA +F KP ++
Sbjct: 757 IMMPDMTGYQVCKAIRETDNLFEMPILMLTASNQPKTVIQAFKEGANDFLYKPFEV 812
>gi|303326361|ref|ZP_07356804.1| chemotaxis protein CheV [Desulfovibrio sp. 3_1_syn3]
gi|345892104|ref|ZP_08842928.1| hypothetical protein HMPREF1022_01588 [Desulfovibrio sp.
6_1_46AFAA]
gi|302864277|gb|EFL87208.1| chemotaxis protein CheV [Desulfovibrio sp. 3_1_syn3]
gi|345047515|gb|EGW51379.1| hypothetical protein HMPREF1022_01588 [Desulfovibrio sp.
6_1_46AFAA]
Length = 317
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 75/127 (59%), Gaps = 3/127 (2%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLG-LLNEDEQTNSQVIQ-VN 65
QFH+L DDS R +++ L+ S +QVT V SG +A ++L L NE + ++ + V+
Sbjct: 181 QFHLLVADDSSSLRHILKSSLEKSGFQVTVVGSGREAWDYLSELRNEAQSKQVELTELVH 240
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
L+I+D MP M G+ L KI+E+ +D+PV++ SS + R ++ GA+ KP
Sbjct: 241 LVISDIEMPEMDGHALTAKIRETPGTQDLPVILFSSLITEALRARGVKVGADRQVSKP-D 299
Query: 126 LADVNKL 132
L +NK+
Sbjct: 300 LPGLNKI 306
>gi|240254528|ref|NP_180090.6| response regulator 12 [Arabidopsis thaliana]
gi|378405150|sp|P62598.2|ARR12_ARATH RecName: Full=Two-component response regulator ARR12
gi|330252573|gb|AEC07667.1| response regulator 12 [Arabidopsis thaliana]
Length = 596
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD K++E LL+ Y VT + KALE LL E++ + +L+I+D
Sbjct: 19 VLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALE---LLRENKN------KFDLVISD 69
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL + D+PV+++S+ + P + + + GA ++ LKPV++ ++
Sbjct: 70 VDMPDMDGFKLLELVGLEM---DLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELK 126
Query: 131 KLKPHLMKGISKEIKEPNNINNKRKG 156
+ H+++ + + NN +KR G
Sbjct: 127 NIWQHVVRSRFDKNRGSNNNGDKRDG 152
>gi|157399678|gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]
Length = 784
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ Y+VTA ++G +A + L ED T V+L++T+
Sbjct: 100 VLLVENDDSTRHVVSALLRNCGYEVTAAENGLQAWKIL----EDYTT-----HVDLVLTE 150
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI + K+IPV++MSS + + + +CL +GA +F KP++ ++
Sbjct: 151 VVMPCLSGIGLLSKIMSHKTCKNIPVIMMSSYDSMNIVFKCLSKGAVDFLAKPIRKNELK 210
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 211 NLWQHVWR 218
>gi|254513978|ref|ZP_05126039.1| adenylate cyclase 1 (ATP pyrophosphate-lyase 1) [gamma
proteobacterium NOR5-3]
gi|219676221|gb|EED32586.1| adenylate cyclase 1 (ATP pyrophosphate-lyase 1) [gamma
proteobacterium NOR5-3]
Length = 496
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV 61
G+ + F +LAVDD +R+L+ R L S + V G +ALE L N D
Sbjct: 136 GLTGEPGF-ILAVDDREENRELLARYLTRSGHFVVTAPGGAEALEMLA--NAD------- 185
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
V++++ D MPGM G ++LR+IK L+ PV+++S E I C+E GA+++
Sbjct: 186 --VDVVLLDRMMPGMDGREVLRRIKAEPKLRATPVIMISGEQDMQGIIECIEAGADDYLF 243
Query: 122 KP 123
KP
Sbjct: 244 KP 245
>gi|308913674|gb|ADO51647.1| PRR59 [Zea mays]
Length = 695
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R+++ LL+ Y+V AV G KA E + + +L++
Sbjct: 53 LRVLLVEHDDSTRQIVTALLRKCGYRVAAVADGMKAWEVM---------RERAYDFDLVL 103
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G LL +I +A K+IPV++MSS++ + +C+++GA +F +KPV+ +
Sbjct: 104 TEVAMPSLSGIQLLSRIAAAAECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNE 163
Query: 129 VNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLND 172
+ L H+ + + + + NN + A+ ++T N+
Sbjct: 164 LGNLWQHVWRRHAMNCQTNGSENNAASNHVSTNVANGSKTGENN 207
>gi|344345123|ref|ZP_08775980.1| response regulator receiver modulated CheW protein [Marichromatium
purpuratum 984]
gi|343803380|gb|EGV21289.1| response regulator receiver modulated CheW protein [Marichromatium
purpuratum 984]
Length = 310
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
D +L VDDS++ RK IER + +QV G AL+FL L E T +
Sbjct: 176 DHHKSILVVDDSMVARKQIERAIGEIGFQVETRSDGRAALDFLEELAE---TGDVSETIE 232
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK--P 123
++I+D MP M GY L RKI++++ LKD+PVV+ SS + + GA++F K P
Sbjct: 233 MVISDIEMPRMDGYTLTRKIRDNSKLKDLPVVLHSSLSGQFNADMVKRAGADDFLPKFDP 292
Query: 124 VQLA 127
+LA
Sbjct: 293 DELA 296
>gi|253700815|ref|YP_003022004.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter sp. M21]
gi|251775665|gb|ACT18246.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter sp. M21]
Length = 452
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS KL+E+LL Y+V +G+ ALE Q N + + +++I+D
Sbjct: 14 ILIVDDSPTQAKLLEQLLAGEGYRVAVARNGSDALE---------QINER--RPDMVISD 62
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M G++L R+++E S+K+ P+V+++ N PS + LE GA F KP
Sbjct: 63 ILMPEMDGFELCRRVREMESIKETPIVLLTHLNDPSDVLHSLEAGANYFVSKP 115
>gi|157399680|gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]
Length = 698
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 13/162 (8%)
Query: 12 LAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDY 71
+ DDS R++I LL+ SY+VTAV G KA E L + ++LI+T+
Sbjct: 67 IEADDST--RQIIGALLRKCSYRVTAVPDGLKAWEIL---------RGRPHNIDLILTEV 115
Query: 72 CMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNK 131
+P ++G+ LL I E K+IPV++MS+++ S + +C+ GA ++ +KP++ ++
Sbjct: 116 DLPAISGFALLTLIAEHEICKNIPVIMMSAQDSVSTVYKCMLRGAADYLVKPIRRNELKN 175
Query: 132 LKPHLMKGISKE--IKEPNNINNKRKGLEEIDSADRTRTRLN 171
L H+ + S I +P + + ++ LE + R N
Sbjct: 176 LWQHVWRKQSSNLGINDPQDESVAQQQLEATSENNAASKRSN 217
>gi|226497556|ref|NP_001141486.1| uncharacterized protein LOC100273598 [Zea mays]
gi|194704770|gb|ACF86469.1| unknown [Zea mays]
gi|414886440|tpg|DAA62454.1| TPA: hypothetical protein ZEAMMB73_402220 [Zea mays]
Length = 629
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
MGM+ VL + R +I LL+ Y+V A G KA + L +
Sbjct: 35 MGMLPRMPVRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDLL---------KEK 85
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
V+L++T+ +P M+G+ LL I E + K+IPV++MSS + S + +C+ +GA +F
Sbjct: 86 SFNVDLVLTEVELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFL 145
Query: 121 LKPVQLADVNKLKPHLMK 138
+KP++ ++ L H+ +
Sbjct: 146 VKPIRKNELRNLWQHVWR 163
>gi|25365080|pir||C84645 hypothetical protein At2g25180 [imported] - Arabidopsis thaliana
Length = 573
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD K++E LL+ Y VT + KALE LL E++ + +L+I+D
Sbjct: 19 VLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALE---LLRENKN------KFDLVISD 69
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL + D+PV+++S+ + P + + + GA ++ LKPV++ ++
Sbjct: 70 VDMPDMDGFKLLELVGLEM---DLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELK 126
Query: 131 KLKPHLMKGISKEIKEPNNINNKRKG 156
+ H+++ + + NN +KR G
Sbjct: 127 NIWQHVVRSRFDKNRGSNNNGDKRDG 152
>gi|387126714|ref|YP_006295319.1| regulator of pathogenicity factors [Methylophaga sp. JAM1]
gi|386273776|gb|AFI83674.1| regulator of pathogenicity factors [Methylophaga sp. JAM1]
Length = 858
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L +D++++++++E +L+ + +QV SG +AL+ L + Q+ + ++I D
Sbjct: 598 ILIAEDNLVNQQVLEGILRHAGHQVILASSGEQALDVL---------SQQIDSIEMLILD 648
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MP +G +++R ++ + DIP++I++++ P RCLE GA EF KP+
Sbjct: 649 MNMPDYSGTEVIRAMRYMDTGHDIPIIILTADATPQAKQRCLEAGANEFLTKPI 702
>gi|395646894|ref|ZP_10434754.1| response regulator receiver sensor signal transduction histidine
kinase [Methanofollis liminatans DSM 4140]
gi|395443634|gb|EJG08391.1| response regulator receiver sensor signal transduction histidine
kinase [Methanofollis liminatans DSM 4140]
Length = 438
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
M T VL V+DS + + +L+ Y VT G AL +G D
Sbjct: 4 MQTRPAISVLVVEDSRTQAEFLRYMLEQEGYDVTLAADGEAALRRIGAGRPD-------- 55
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
++++D MPGM GYDL R+IK+ IPV+++++ P+ + R LE GA+ F +K
Sbjct: 56 ---IVLSDILMPGMDGYDLCRRIKQEHPA--IPVILVTTLFDPADVMRGLEAGADSFIVK 110
Query: 123 PVQLADVNKLKPHLMKGISKEIKEPNNI 150
PV+ V ++K + E+ +P+ +
Sbjct: 111 PVEPGHVRSQVEAVLK--AAEVPDPDGV 136
>gi|436842876|ref|YP_007327254.1| Multi-sensor hybrid histidine kinase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432171782|emb|CCO25155.1| Multi-sensor hybrid histidine kinase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 826
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 11/114 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L V+DS+ +E L +Q++ +G +AL G+L E + ++L+I+
Sbjct: 5 HILVVEDSLTQAVKLEFFLFERGFQISLASNGERAL---GILAEKD--------IDLVIS 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D MPGM GY+L KI+E+ K +PV++++S + P I + L+ GA F KP
Sbjct: 54 DVIMPGMDGYELCEKIRENPQYKSVPVILLTSLSDPGDIIKGLKSGATNFVTKP 107
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
+S F +L V+D+ I+ K+ +LK + + +G +A+ L L V+
Sbjct: 576 NSVFRILLVEDNPINVKVATCMLKKMGHVIEVAGNGVEAISTLSKLT-----------VD 624
Query: 66 LIITDYCMPGMTGYDLLRKIKESAS---LKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
LI+ D MP M G++ R I+ + KDIP++ MS+ + ++C + G + K
Sbjct: 625 LILMDLEMPEMDGFEASRNIRMGMAGEDKKDIPIIAMSAHAMAGVKDKCSKSGMNNYIAK 684
Query: 123 PVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLND 172
PVQ AD+ ++ I +K+ +++ K E +D R++ ND
Sbjct: 685 PVQYADLKQV-------ILATLKDSCSVSKGNKQNEVLDEIVLDRSKAND 727
>gi|357464211|ref|XP_003602387.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355491435|gb|AES72638.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 685
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R++I LL+ +Y+V AV G KA E L + ++LI+T+
Sbjct: 58 VLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEIL---------KGRPRSIDLILTE 108
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++GY LL I E K IPV++MSS++ S + +C+ GA ++ +KP+++ ++
Sbjct: 109 VDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELR 168
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 169 NLWQHVWR 176
>gi|334715201|gb|AEG90656.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 76/129 (58%), Gaps = 9/129 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+VL V+ R+++ LL+ YQV + ++G +A +L ED+Q N +++++
Sbjct: 81 NVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL----EDKQNN-----IDIVLI 131
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
+ MPG++G LL +I K+IPV++MSS + + + +CL +GA +F +KP++ ++
Sbjct: 132 EVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNEL 191
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 192 KNLWQHVWR 200
>gi|334715199|gb|AEG90655.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 76/129 (58%), Gaps = 9/129 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+VL V+ R+++ LL+ YQV + ++G +A +L ED+Q N +++++
Sbjct: 81 NVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL----EDKQNN-----IDIVLI 131
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
+ MPG++G LL +I K+IPV++MSS + + + +CL +GA +F +KP++ ++
Sbjct: 132 EVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNEL 191
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 192 KNLWQHVWR 200
>gi|334715203|gb|AEG90657.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 76/129 (58%), Gaps = 9/129 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+VL V+ R+++ LL+ YQV + ++G +A +L ED+Q N +++++
Sbjct: 81 NVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL----EDKQNN-----IDIVLI 131
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
+ MPG++G LL +I K+IPV++MSS + + + +CL +GA +F +KP++ ++
Sbjct: 132 EVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNEL 191
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 192 KNLWQHVWR 200
>gi|357012725|ref|ZP_09077724.1| signal transduction histidine kinase, LytS [Paenibacillus elgii
B69]
Length = 1019
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
T +F +LAVDD + +++ L +Y++ S +AL+ L QT +
Sbjct: 688 TGRKFTILAVDDEPSNLQVLSVLFAGEAYRMLKTTSPQEALQLL-------QTTGTI--- 737
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+L++ D MP ++GY++ R+I+ +L D+P+V++++ N PS + E GA +F +KP
Sbjct: 738 DLVLLDVMMPNLSGYEVCREIRRQYTLFDLPIVMLTARNTPSEVAAGFEAGANDFIIKP 796
>gi|281308390|gb|ADA58343.1| pseudo-response regulator 9 [Brassica rapa]
Length = 412
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 79/131 (60%), Gaps = 9/131 (6%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R++I LL+ SY+V AV G A E L E++N +++LI+T+
Sbjct: 28 VLLVESDDSTRQIITALLQKCSYKVVAVSDGLAAWETL-----KEKSN----EIDLILTE 78
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++G+ LL + E + K+IPV++MSSE+ + + +C+ +GA ++ +KP++ ++
Sbjct: 79 LDLPAISGFALLALVMEHEACKNIPVIMMSSEDSMTMVLKCMLKGAADYLIKPMRKNELK 138
Query: 131 KLKPHLMKGIS 141
L H+ + ++
Sbjct: 139 NLWQHVWRRLA 149
>gi|88706905|ref|ZP_01104604.1| Adenylyl cyclase class-3/4/guanylyl cyclase [Congregibacter
litoralis KT71]
gi|88698827|gb|EAQ95947.1| Adenylyl cyclase class-3/4/guanylyl cyclase [Congregibacter
litoralis KT71]
Length = 495
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 11/120 (9%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T +LAVDD +R L+ R L S + V SG +ALE L N D
Sbjct: 136 ITSDPGFILAVDDREENRALLARYLTRSGHFVVTAPSGEEALEMLA--NAD--------- 184
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
V++++ D MPGM G ++LR+IK L+ PV+++S E I C++ GA+++ KP
Sbjct: 185 VDVVLLDRMMPGMDGREVLRRIKAEPRLRATPVIMISGEQDMQGIIECIKAGADDYLFKP 244
>gi|147776739|emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
Length = 991
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL+ SY+V AV G KA E L + E N V+LI+
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEAL----KGEPQN-----VDLIL 101
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++G+ LL I E K IPV++MSS + S + +C+ +GA +F +KPV+ +
Sbjct: 102 TEVELPSISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNE 161
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 162 LXNLWQHVWR 171
>gi|323139254|ref|ZP_08074308.1| adenylate/guanylate cyclase [Methylocystis sp. ATCC 49242]
gi|322395475|gb|EFX98022.1| adenylate/guanylate cyclase [Methylocystis sp. ATCC 49242]
Length = 539
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 11/116 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L VDD+ +R L++R L+ + V ++G+ AL + + Q +L++
Sbjct: 195 RILVVDDNASNRDLLKRRLERQGHAVVLAENGSSALAIV-----------KQAQFDLVLL 243
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP ++G+D+L +K SL+DIPV+++S+ N I RC+E GAE++ KP +
Sbjct: 244 DLLMPDISGFDVLSILKSDLSLRDIPVIMISALNEIDTIVRCIEAGAEDYLAKPFE 299
>gi|168027173|ref|XP_001766105.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
gi|162682748|gb|EDQ69164.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
Length = 1056
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+D R ++ LL+ +Y+VT V +G+ A GLL E+ NS +L++TD
Sbjct: 308 VLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAW---GLL---EEANSNF---DLVLTD 358
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL K+ + + K +P+VIMSS + + RCL +GA ++ +KPV+ ++
Sbjct: 359 VVMPYLSGVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELK 418
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 419 NLWQHVWR 426
>gi|297746178|emb|CBI16234.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 76/128 (59%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ SY+VTAV +G +A + L ++ TN +++++T+
Sbjct: 97 VLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKIL-----EDLTN----HIDIVLTE 147
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI + K+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 148 VVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELK 207
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 208 NLWQHVWR 215
>gi|427724437|ref|YP_007071714.1| response regulator receiver protein [Leptolyngbya sp. PCC 7376]
gi|427356157|gb|AFY38880.1| response regulator receiver protein [Leptolyngbya sp. PCC 7376]
Length = 121
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 11/120 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L V+DSI R++I LLK S +V G +ALE N + Q +LI+
Sbjct: 3 KILVVEDSISQREMISELLKGSGLKVEVAGDGVEALE-----------NLKQFQPDLIVL 51
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP M GY+L RKIK KD+PVV+ SS+ +++GA+ + KP Q A++
Sbjct: 52 DIVMPRMNGYELCRKIKSDPKTKDVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPAEL 111
>gi|336322409|ref|YP_004602376.1| response regulator receiver protein [Flexistipes sinusarabici DSM
4947]
gi|336105990|gb|AEI13808.1| response regulator receiver protein [Flexistipes sinusarabici DSM
4947]
Length = 121
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL DDS +R+++ LK++ + VT V+ G+ AL+ + +D + + II
Sbjct: 2 LKVLLADDSSTEREMMSSALKSAGFDVTEVEDGDAALD---AIKKD--------RFDCII 50
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
D MPG GY + R++K+ S+KDIPVVI++S+ S ++GA+E+ +KP ++ +
Sbjct: 51 LDIIMPGKNGYQVCRQVKKDESMKDIPVVIVTSKGQDSDKFWGKKQGADEYLVKPFEMDE 110
Query: 129 VNKLKPHLM 137
+ K L+
Sbjct: 111 MVKTVKDLL 119
>gi|220906186|ref|YP_002481497.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
gi|219862797|gb|ACL43136.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
Length = 406
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD++I+R L+ R L+ + V ++G +AL+ L SQ +L++ D
Sbjct: 176 ILVVDDTLINRDLLSRRLERQGHTVKLSENGQQALQLL---------ESQSF--DLVLLD 224
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M G +LLR +K++ + KDIPV+++S+ + RC+E GAE++ KP
Sbjct: 225 VIMPKMNGLELLRLMKDTPNWKDIPVIMISALDEVESAVRCIELGAEDYLTKP 277
>gi|357010943|ref|ZP_09075942.1| two-component hybrid sensor and regulator [Paenibacillus elgii B69]
Length = 1037
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ ++LAVDD ++ K++ +L T Y V V SG +ALE L D L+
Sbjct: 703 KMNILAVDDDPVNLKVLVGILSTEPYHVRTVSSGQEALELLDTEPWD-----------LL 751
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
I D MP M+GY+L R+++ S+ ++PV+++++ + P+ I GA ++ KPV
Sbjct: 752 IADVMMPHMSGYELTRRVRTHYSISELPVLLLTARSQPADIYTGFLSGANDYVTKPV 808
>gi|197118407|ref|YP_002138834.1| response receiver histidine kinase [Geobacter bemidjiensis Bem]
gi|197087767|gb|ACH39038.1| response receiver histidine kinase [Geobacter bemidjiensis Bem]
Length = 452
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 11/115 (9%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+ +L VDDS KL+E+LL Y+V +G+ ALE + + Q +L+I
Sbjct: 12 YLILIVDDSPTQAKLLEQLLAGEGYRVAIARNGSDALEQI-----------RERQPDLVI 60
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+D MP M G++L R+++ S+KD P+V+++ N PS + LE GA F KP
Sbjct: 61 SDILMPEMDGFELCRRVRGMESIKDTPIVLLTHLNDPSDVLHSLEAGANYFVSKP 115
>gi|379025638|dbj|BAL63596.1| pseudo-response regulator [Triticum durum]
Length = 266
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 12/129 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCMPG-MTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G ++G DLL +I KDIPV++MSS + + CL GA EF KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|145514151|ref|XP_001442986.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410347|emb|CAK75589.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 14/151 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+VL +D+ I R + LL+ +YQV A ++G +A + L L E+E +LI+
Sbjct: 15 NVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDEL-LKTENE--------FDLILL 65
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D +P MTG +LL+ IK LKD+PV++MS ++ + CL GAE++ +KPV +
Sbjct: 66 DLGLPEMTGLELLQIIKAIDKLKDVPVIMMSGDDETETVAACLNAGAEDYMVKPVNFKKL 125
Query: 130 NKLKPHLMKGISKEIKEPNNINNKRKGLEEI 160
L+ + K+ K+ NN N KG I
Sbjct: 126 QGLQTF----VKKKPKQRNN-NQNEKGYYTI 151
>gi|326518812|dbj|BAJ92567.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 687
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ Y+V AV G KA E + + +L++T+
Sbjct: 40 VLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVM---------RGRAYAFDLVLTE 90
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G DLL +I + K+IPV++MSS++ + +C++ GA +F +KPV+ ++
Sbjct: 91 VNMPTLSGIDLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQNGAVDFLVKPVRKNELR 150
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 151 NLWQHVWR 158
>gi|170727199|ref|YP_001761225.1| response regulator receiver modulated diguanylate cyclase
[Shewanella woodyi ATCC 51908]
gi|169812546|gb|ACA87130.1| response regulator receiver modulated diguanylate cyclase
[Shewanella woodyi ATCC 51908]
Length = 415
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 10/113 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL DDS++ RK + LL+ +QV D G ALE L SQ + L+ITD
Sbjct: 124 VLVADDSMVSRKFVRSLLEQQLFQVIEADDGLSALEIL---------KSQP-DITLLITD 173
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
Y MPG+ G+ L+ K++ES + +++ ++ +SS++ S R ++ GA +F KP
Sbjct: 174 YNMPGLDGFGLILKVRESFTREELAIIGLSSDDDESLSARFIKNGANDFLQKP 226
>gi|255566892|ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
gi|223536313|gb|EEF37964.1| conserved hypothetical protein [Ricinus communis]
Length = 667
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 9/138 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL+ SY+V AV G KA E L + ++LI+
Sbjct: 44 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEML---------KGKPHNIDLIL 94
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++GY LL I E K+IPV++MSS++ S + +C+ GA ++ +KP++ +
Sbjct: 95 TEVELPSISGYALLTLIMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPIRKNE 154
Query: 129 VNKLKPHLMKGISKEIKE 146
+ L H+ + S +E
Sbjct: 155 LRNLWQHVWRRQSSLARE 172
>gi|118638626|gb|ABL09469.1| truncated pseudo-response regulator [Triticum aestivum]
gi|383215295|gb|AFG73160.1| pseudo-response regulator [Triticum aestivum]
Length = 432
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 12/129 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 39 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 87
Query: 71 YCMPG-MTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G ++G DLL +I KDIPV++MSS N + CL GA +F KP++ ++
Sbjct: 88 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNEL 147
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 148 KNLWAHVWR 156
>gi|395793685|ref|ZP_10473042.1| putative sensory box GGDEF/EAL domain-containing protein
[Pseudomonas sp. Ag1]
gi|421138884|ref|ZP_15598935.1| sensory box protein/response regulator [Pseudomonas fluorescens
BBc6R8]
gi|395342171|gb|EJF73955.1| putative sensory box GGDEF/EAL domain-containing protein
[Pseudomonas sp. Ag1]
gi|404509930|gb|EKA23849.1| sensory box protein/response regulator [Pseudomonas fluorescens
BBc6R8]
Length = 422
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 11/115 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD I RKL+E LL+ YQ + SG +AL+ + D LI+ D
Sbjct: 8 LLIVDDEIQVRKLLETLLRHEGYQTVSAASGEEALQLVAQRPPD-----------LILLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MPGM GY++ ++K + + +IP++++S+ + S LE GAEEF KPV+
Sbjct: 57 IMMPGMDGYEVANQLKGNQATANIPIIMLSALSESSARLSGLETGAEEFISKPVE 111
>gi|356536913|ref|XP_003536977.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 747
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 75/128 (58%), Gaps = 11/128 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ +DDS R ++ LL+ SY+V +G +A + L ++ TN ++L++T+
Sbjct: 83 LVEIDDST--RHVVTALLRNCSYEVIEAANGLQAWKIL-----EDLTN----HIDLVLTE 131
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG++G LL KI + K+IPVV+MSS + + +CL +GA +F +KP++ ++
Sbjct: 132 VAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELK 191
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 192 NLWQHVWR 199
>gi|224098126|ref|XP_002311123.1| pseudo response regulator [Populus trichocarpa]
gi|222850943|gb|EEE88490.1| pseudo response regulator [Populus trichocarpa]
Length = 766
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ Y+VTAV +G +A + L L TN ++L++T+
Sbjct: 94 VLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDL-----TN----HIDLVLTE 144
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI + ++IPV++MSS + + + +CL +GA +F +KP++ ++
Sbjct: 145 VAMPCLSGIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELK 204
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 205 ILWQHVWR 212
>gi|218191229|gb|EEC73656.1| hypothetical protein OsI_08184 [Oryza sativa Indica Group]
Length = 54
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 43/48 (89%)
Query: 85 IKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKL 132
++ES+ LK IPV IMSSEN+P+RI+RCLEEGAE+F +KPV+ +DV++L
Sbjct: 1 MQESSKLKKIPVAIMSSENVPTRISRCLEEGAEDFLVKPVRPSDVSRL 48
>gi|226315436|ref|YP_002775332.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
gi|226098386|dbj|BAH46828.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
Length = 1050
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD ++ +++E +L Y+VT V SG +AL LG D L+I+D
Sbjct: 711 LLIVDDDPVNLQVLEAILPPDEYEVTMVTSGKEALAILGTGEWD-----------LVISD 759
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MP M+GY+L R I+E +L ++PV+++++ + P I GA ++ KP++
Sbjct: 760 IMMPQMSGYELTRMIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPIE 814
>gi|224098134|ref|XP_002311124.1| predicted protein [Populus trichocarpa]
gi|222850944|gb|EEE88491.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ Y+VTAV +G +A + L L TN ++L++T+
Sbjct: 39 VLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDL-----TN----HIDLVLTE 89
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI + ++IPV++MSS + + + +CL +GA +F +KP++ ++
Sbjct: 90 VAMPCLSGIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELK 149
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 150 ILWQHVWR 157
>gi|406891982|gb|EKD37456.1| PAS/PAC sensor hybrid histidine kinase [uncultured bacterium]
Length = 618
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 11/118 (9%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
D+ ++L V+DS + + +L+ +++VT +G +ALE L + + N
Sbjct: 7 DNYLNILLVEDSPTQAEQLRYILEKRNFRVTLAGNGKQALEIL-----------REFRPN 55
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
++ITD MP M GY+L R I+ LKDIPV+++++ + P+ + R LE GA F KP
Sbjct: 56 VVITDVVMPEMDGYELCRTIRSREKLKDIPVILVTTLSDPTDVIRGLEVGANNFITKP 113
>gi|146161471|ref|XP_001007239.2| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|146146737|gb|EAR86994.2| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 847
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 20/152 (13%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVL +D R + +L YQVTAV++G A + LL D +++++
Sbjct: 10 HVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARD--ELLKADSN-------IDIVLL 60
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP M G +LL ++E LK IPV++MS +N R+ C+ GA+++ +KP+++ +V
Sbjct: 61 DLYMPEMDGIELLLLMQEHEHLKRIPVIMMSFDNEQERVAYCIANGAKDYLVKPLRIQNV 120
Query: 130 NKLKPHLMKGISKEIK-EPNN--INNKRKGLE 158
KG++K ++ PNN + N GL+
Sbjct: 121 --------KGLAKYVEYNPNNTTVGNGGVGLQ 144
>gi|392959177|ref|ZP_10324661.1| response regulator receiver [Pelosinus fermentans DSM 17108]
gi|421052959|ref|ZP_15515943.1| response regulator receiver [Pelosinus fermentans B4]
gi|421061771|ref|ZP_15524039.1| response regulator receiver [Pelosinus fermentans B3]
gi|421068090|ref|ZP_15529470.1| response regulator receiver [Pelosinus fermentans A12]
gi|421070087|ref|ZP_15531223.1| response regulator receiver protein [Pelosinus fermentans A11]
gi|392442706|gb|EIW20283.1| response regulator receiver [Pelosinus fermentans B4]
gi|392444899|gb|EIW22273.1| response regulator receiver [Pelosinus fermentans A12]
gi|392447332|gb|EIW24585.1| response regulator receiver [Pelosinus fermentans B3]
gi|392448698|gb|EIW25879.1| response regulator receiver protein [Pelosinus fermentans A11]
gi|392456560|gb|EIW33302.1| response regulator receiver [Pelosinus fermentans DSM 17108]
Length = 124
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 71/121 (58%), Gaps = 9/121 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L+VDDS I RK+I ++ Y++ G +AL L E++ ++I LI+ D
Sbjct: 3 ILSVDDSAIIRKIIRSGVEVLDYELVEAADGIEALTIL------EESFEEII---LILLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+ MPGM G L KIK +ASLK IPV+++++E+ I R ++ GA + +KP + ++
Sbjct: 54 WNMPGMDGLVFLEKIKNTASLKHIPVMMVTTESEKENIIRAIQAGAINYLVKPFTIEELM 113
Query: 131 K 131
K
Sbjct: 114 K 114
>gi|46200530|gb|AAS82604.1| putative response regulator [Zea mays]
Length = 87
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 39/42 (92%)
Query: 73 MPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEE 114
+PGMTGY+LL+++KESA+L DI VVIMSSEN+P+RI RCLEE
Sbjct: 38 VPGMTGYELLKRVKESAALSDILVVIMSSENVPNRITRCLEE 79
>gi|357417568|ref|YP_004930588.1| RpfC protein [Pseudoxanthomonas spadix BD-a59]
gi|355335146|gb|AER56547.1| RpfC protein [Pseudoxanthomonas spadix BD-a59]
Length = 742
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 13/117 (11%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L DD +R +++RLL+ + ++V+ V+ G L+ + + + D +I
Sbjct: 475 HILVADDHQANRMVLQRLLQKAGHRVSCVNGGEDVLDAMAMSDYDA-----------VII 523
Query: 70 DYCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MPGM+G DLL++++ ++ PV+++S++ P I+RC + GA F KPV
Sbjct: 524 DLHMPGMSGLDLLKELRVMQAGGGPITPVMVLSADVTPESISRCEQAGAYAFLAKPV 580
>gi|218200317|gb|EEC82744.1| hypothetical protein OsI_27455 [Oryza sativa Indica Group]
Length = 507
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ Y+V ++G +A +L ED Q + ++L++T+
Sbjct: 63 VLLVESDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL----EDMQNS-----IDLVLTE 113
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG++G LL +I K+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 114 VVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELK 173
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 174 NLWQHVWR 181
>gi|300022157|ref|YP_003754768.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans ATCC 51888]
gi|299523978|gb|ADJ22447.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans ATCC 51888]
Length = 456
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 12/124 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD + + KL+E L+ ++V +SG +AL+ L E E V++++ D
Sbjct: 5 VLVVDDILANVKLLEARLQAEYFEVLTANSGRQALDLL----ERES-------VDVVLLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV-QLADV 129
MPGM G++ R IK S + IPVV++++ + PS + LE GA++F KPV +A V
Sbjct: 54 VMMPGMDGFETCRHIKASHATHHIPVVMVTALDQPSDKVQGLESGADDFLTKPVDDIALV 113
Query: 130 NKLK 133
++K
Sbjct: 114 TRVK 117
>gi|237654348|ref|YP_002890662.1| CheA signal transduction histidine kinase [Thauera sp. MZ1T]
gi|237625595|gb|ACR02285.1| CheA signal transduction histidine kinase [Thauera sp. MZ1T]
Length = 1907
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
V+ VDDS+ RK+ RLL+ Y+V G ALE L L D +++TD
Sbjct: 1787 VMVVDDSLTVRKITGRLLEREGYRVLTAKDGVDALEQLIDLKPD-----------VVLTD 1835
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MP M G+DL+R I+ A L D+PVV+++S LE GA+ + KP Q
Sbjct: 1836 IEMPRMDGFDLVRNIRADARLHDLPVVVITSRLAEKHRRYALEVGADHYLGKPYQ 1890
>gi|51571877|dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa Japonica Group]
Length = 742
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VD R+++ LL+ Y+V ++G +A +L ED Q + ++L++T+
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL----EDMQNS-----IDLVLTE 114
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG++G LL +I K+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 115 VVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELK 174
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 175 NLWQHVWR 182
>gi|115474289|ref|NP_001060743.1| Os07g0695100 [Oryza sativa Japonica Group]
gi|122166891|sp|Q0D3B6.1|PRR37_ORYSJ RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
gi|34394035|dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
gi|113612279|dbj|BAF22657.1| Os07g0695100 [Oryza sativa Japonica Group]
Length = 742
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VD R+++ LL+ Y+V ++G +A +L ED Q + ++L++T+
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL----EDMQNS-----IDLVLTE 114
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG++G LL +I K+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 115 VVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELK 174
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 175 NLWQHVWR 182
>gi|158513660|sp|A2YQ93.2|PRR37_ORYSI RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
Length = 742
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VD R+++ LL+ Y+V ++G +A +L ED Q + ++L++T+
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL----EDMQNS-----IDLVLTE 114
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG++G LL +I K+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 115 VVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELK 174
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 175 NLWQHVWR 182
>gi|315649065|ref|ZP_07902158.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
gi|315275500|gb|EFU38855.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
Length = 888
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
F +L VDD ++ K+I LL Y +T V +AL L EQ + +LII
Sbjct: 555 FRLLVVDDDPVNLKVIRGLLSGEGYWITVVTQAEEALRLL------EQA-----EWDLII 603
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+D MP M+GY+L R+I++ L ++P++++++ + P I+ GA ++ +KPV
Sbjct: 604 SDVMMPQMSGYELSRRIRQRYMLAELPILLLTARSQPEDIHMGFMSGANDYLIKPV 659
>gi|418054526|ref|ZP_12692582.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans 1NES1]
gi|353212151|gb|EHB77551.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans 1NES1]
Length = 456
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 73/124 (58%), Gaps = 12/124 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD + + KL+E L+ ++V +SG +AL+ L E E V++++ D
Sbjct: 5 VLVVDDILANVKLLEARLQAEYFEVLTANSGQQALDLL----ERES-------VDVVLLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV-QLADV 129
MPGM G++ R+IK S + IPVV++++ + P+ + LE GA++F KPV +A V
Sbjct: 54 VMMPGMDGFETCRRIKASHATHHIPVVMVTALDQPTDKVQGLESGADDFLTKPVDDIALV 113
Query: 130 NKLK 133
++K
Sbjct: 114 TRVK 117
>gi|325910798|dbj|BAJ83829.1| circadian response regulator 2b [Physcomitrella patens subsp.
patens]
Length = 917
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+D R ++ LL+ +Y+VT V +G+ A GLL E+ NS +L++TD
Sbjct: 188 VLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAW---GLL---EEANSNF---DLVLTD 238
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL K+ + + K +P+VIMSS + + RCL +GA ++ +KPV+ ++
Sbjct: 239 VVMPYLSGVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELK 298
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 299 NLWQHVWR 306
>gi|319786383|ref|YP_004145858.1| multi-sensor hybrid histidine kinase [Pseudoxanthomonas suwonensis
11-1]
gi|317464895|gb|ADV26627.1| multi-sensor hybrid histidine kinase [Pseudoxanthomonas suwonensis
11-1]
Length = 791
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 15/129 (11%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L +D I+R +I R L+ Y V G +AL L D L++TD
Sbjct: 547 ILVAEDHPINRAVISRQLQRLGYPHEIVCDGEEALRALATTRYD-----------LLVTD 595
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
MPG+ GY+L R+I+ E + +P++ +S+ +P ++RC+E G ++F KPVQL +
Sbjct: 596 CHMPGLDGYELARRIRGREDGGGR-LPIIALSASVLPGHVSRCIEAGMDDFLAKPVQLHE 654
Query: 129 VN-KLKPHL 136
+ KL HL
Sbjct: 655 LELKLARHL 663
>gi|51571883|dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa Indica Group]
Length = 704
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VD R+++ LL+ Y+V ++G +A +L ED Q + ++L++T+
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL----EDMQNS-----IDLVLTE 114
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG++G LL +I K+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 115 VVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELK 174
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 175 NLWQHVWR 182
>gi|322435954|ref|YP_004218166.1| response regulator receiver protein [Granulicella tundricola
MP5ACTX9]
gi|321163681|gb|ADW69386.1| response regulator receiver protein [Granulicella tundricola
MP5ACTX9]
Length = 133
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL VDDS + RK++ER L+ S +TAV N + L LL E Q ++LI+
Sbjct: 1 MRVLIVDDSAVMRKVVERALRQSGLPITAVLQANDGQQALDLLREPTQEP-----LDLIL 55
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
TD MPG+ G D L + + + PVV++++E + ++R + GA+ + KP
Sbjct: 56 TDINMPGLGGLDFLEQRNQQSLAPGTPVVMITTEGSEALVHRAIAAGAKGYICKP 110
>gi|356518667|ref|XP_003528000.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 700
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL+ SY+V AV G KA E L + V+LI+
Sbjct: 50 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWELL---------KGRPHNVDLIL 100
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++GY LL I E K+IPV++MSS++ S + +C+ GA ++ +KP++ +
Sbjct: 101 TEVDLPSVSGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNE 160
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 161 LRNLWQHVWR 170
>gi|403381459|ref|ZP_10923516.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
JC66]
Length = 1069
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 79/136 (58%), Gaps = 12/136 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD ++ +++E +L +Y+VT V SG +AL +L++ E +L+I+D
Sbjct: 746 ILMVDDDPVNLQVMEAILSPDNYEVTMVTSGKEAL---AMLDKKEW--------DLVISD 794
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M+GY+L RKI+E +L ++PV+++++ + I GA ++ KPV+ ++
Sbjct: 795 IMMPQMSGYELTRKIRERFTLTELPVLLLTARDQGKDIQAGFLAGANDYVAKPVEALEI- 853
Query: 131 KLKPHLMKGISKEIKE 146
+ + ++ I + +E
Sbjct: 854 RSRVDMLTAIKQSARE 869
>gi|417860505|ref|ZP_12505561.1| two component response regulator [Agrobacterium tumefaciens F2]
gi|338823569|gb|EGP57537.1| two component response regulator [Agrobacterium tumefaciens F2]
Length = 430
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
++T+ F VL VDD+ R + +L+ +++V+ SG +ALE L SQ
Sbjct: 118 ILTNRLFSVLVVDDARTARSGLVEILERQNFRVSEAHSGKRALEIL----------SQDP 167
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP M GY+L R+I++S+S +D+ V+ +SS L+ GA +F +
Sbjct: 168 SIQLVITDYHMPDMDGYELTRRIRDSSSSEDLRVIGISSSTDRLLSASFLKAGASDFVYR 227
Query: 123 P 123
P
Sbjct: 228 P 228
>gi|456735763|gb|EMF60489.1| Sensory/regulatory protein rpfC [Stenotrophomonas maltophilia EPM1]
Length = 910
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL DD +R +++RLL+ + ++VT V+ G + L+ L EQ + + I
Sbjct: 647 LRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL------EQAS-----YDAAI 695
Query: 69 TDYCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MPGM+G DLL++++ +++ + +PV+++S++ P I RC + GA F KPV
Sbjct: 696 VDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 753
>gi|408822682|ref|ZP_11207572.1| histidine kinase/response regulator fusion protein, regulation of
pathogenicity factors [Pseudomonas geniculata N1]
Length = 910
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL DD +R +++RLL+ + ++VT V+ G + L+ L EQ + + I
Sbjct: 647 LRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL------EQAS-----YDAAI 695
Query: 69 TDYCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MPGM+G DLL++++ +++ + +PV+++S++ P I RC + GA F KPV
Sbjct: 696 VDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 753
>gi|424668616|ref|ZP_18105641.1| hypothetical protein A1OC_02213 [Stenotrophomonas maltophilia
Ab55555]
gi|401068878|gb|EJP77402.1| hypothetical protein A1OC_02213 [Stenotrophomonas maltophilia
Ab55555]
Length = 907
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL DD +R +++RLL+ + ++VT V+ G + L+ L EQ + + I
Sbjct: 644 LRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL------EQAS-----YDAAI 692
Query: 69 TDYCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MPGM+G DLL++++ +++ + +PV+++S++ P I RC + GA F KPV
Sbjct: 693 VDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 750
>gi|225435163|ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
vinifera]
Length = 785
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 76/128 (59%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ SY+VTAV +G +A + L ++ TN +++++T+
Sbjct: 97 VLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKIL-----EDLTN----HIDIVLTE 147
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI + K+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 148 VVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELK 207
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 208 NLWQHVWR 215
>gi|254521065|ref|ZP_05133120.1| sensory/regulatory protein RpfC [Stenotrophomonas sp. SKA14]
gi|219718656|gb|EED37181.1| sensory/regulatory protein RpfC [Stenotrophomonas sp. SKA14]
Length = 910
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL DD +R +++RLL+ + ++VT V+ G + L+ L EQ + + I
Sbjct: 647 LRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL------EQAS-----YDAAI 695
Query: 69 TDYCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MPGM+G DLL++++ +++ + +PV+++S++ P I RC + GA F KPV
Sbjct: 696 VDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 753
>gi|190574186|ref|YP_001972031.1| histidine kinase/response regulator fusion protein, regulation of
pathogenicity factors [Stenotrophomonas maltophilia
K279a]
gi|190012108|emb|CAQ45731.1| putative histidine kinase/response regulator fusion protein,
regulation of pathogenicity factors [Stenotrophomonas
maltophilia K279a]
Length = 883
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL DD +R +++RLL+ + ++VT V+ G + L+ L EQ + + I
Sbjct: 620 LRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL------EQAS-----YDAAI 668
Query: 69 TDYCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MPGM+G DLL++++ +++ + +PV+++S++ P I RC + GA F KPV
Sbjct: 669 VDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 726
>gi|220910102|ref|YP_002485413.1| cheA signal transduction histidine kinase [Cyanothece sp. PCC 7425]
gi|219866713|gb|ACL47052.1| CheA signal transduction histidine kinase [Cyanothece sp. PCC 7425]
Length = 941
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDSI R+L+ER+L YQVTA G +ALE L N + ++I+D
Sbjct: 823 ILIVDDSIAVRRLLERVLTQGGYQVTACRDGKEALEEL---------NRSQGNIAMVISD 873
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MP + GY LL++I+ +PV +++S + S + ++ GA +F KP Q ++
Sbjct: 874 IEMPRLDGYGLLKEIRTHPRWHRLPVAMLTSRSSDSHRQKAMDLGATTYFTKPFQATEL 932
>gi|194365606|ref|YP_002028216.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
R551-3]
gi|194348410|gb|ACF51533.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
R551-3]
Length = 907
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL DD +R +++RLL+ + ++VT V+ G + L+ L EQ + + I
Sbjct: 644 LRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL------EQAS-----YDAAI 692
Query: 69 TDYCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MPGM+G DLL++++ +++ + +PV+++S++ P I RC + GA F KPV
Sbjct: 693 VDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPDSILRCEQAGARAFLAKPV 750
>gi|427711594|ref|YP_007060218.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 6312]
gi|427375723|gb|AFY59675.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 6312]
Length = 385
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
MG+V +H+L +DD R ++ + L+ Y+VT + G + + ++
Sbjct: 1 MGLVFGVAYHILVIDDDPTTRLILAKNLRNQGYEVTTTNHGEAGI-----------STAR 49
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEF 119
IQ LII D+ MPG+ G ++ R+IK L I V++++ ++I RI R L+ GA+EF
Sbjct: 50 EIQPALIICDWMMPGLDGLEVCRRIKADPDLASIFFVLLTAKDDIADRI-RGLDAGADEF 108
Query: 120 FLKPVQ 125
KP++
Sbjct: 109 LSKPIE 114
>gi|154492193|ref|ZP_02031819.1| hypothetical protein PARMER_01827 [Parabacteroides merdae ATCC
43184]
gi|423345349|ref|ZP_17323038.1| hypothetical protein HMPREF1060_00710 [Parabacteroides merdae
CL03T12C32]
gi|423722206|ref|ZP_17696382.1| hypothetical protein HMPREF1078_00445 [Parabacteroides merdae
CL09T00C40]
gi|154087418|gb|EDN86463.1| response regulator receiver domain protein [Parabacteroides merdae
ATCC 43184]
gi|409223135|gb|EKN16072.1| hypothetical protein HMPREF1060_00710 [Parabacteroides merdae
CL03T12C32]
gi|409242697|gb|EKN35458.1| hypothetical protein HMPREF1078_00445 [Parabacteroides merdae
CL09T00C40]
Length = 372
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 12/141 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
SQ+ VL VDD + L++ +LK Y + DSG KAL +Q NL
Sbjct: 6 SQYTVLVVDDVPTNVMLVQAILKKEGYTLLTTDSGAKALRI-----------AQERHPNL 54
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
I+ D MP M GY++L+ +K + +IPV+IMS+ + I + + GA E+ KP Q
Sbjct: 55 ILLDIMMPEMDGYEVLQHLKSNPETNNIPVIIMSALSDMQSIVKGYQLGATEYVTKPFQR 114
Query: 127 ADVNKLKPHLMKGIS-KEIKE 146
++ K H + S K IK+
Sbjct: 115 EELVKRVAHRYELFSIKRIKQ 135
>gi|62082589|gb|AAX62130.1| response regulator protein [Bacillus thuringiensis phage MZTP02]
Length = 342
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ--VNLII 68
+L VDDS RK+IE L+T+ Y V G + LE + + Q + VN +I
Sbjct: 203 ILVVDDSAFIRKMIETTLRTAGYNVITAKDGGEGLEMMTDFDRLAQEERMPVTGFVNAVI 262
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TD MP M G LL++++++ S K++P+V+ SS + L+ GA + KP ++
Sbjct: 263 TDVEMPRMDGMHLLKRLRDTPSYKEMPIVMFSSLMSDDNRQKALQLGANDTITKP-EIGR 321
Query: 129 VNKLKPHLMKGISKEIKEPNNINN 152
+ + H++ GI+ P+ NN
Sbjct: 322 MVGMMDHMLLGIAP----PSPANN 341
>gi|379025622|dbj|BAL63588.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025624|dbj|BAL63589.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359226|dbj|BAM93442.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 186
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCMPG-MTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G ++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|255548045|ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223545559|gb|EEF47063.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 697
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 74/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R++I LL+ SY+V AV G A E L +D N ++LI+T+
Sbjct: 43 VLLVEADYSTRQIISALLRKCSYRVAAVPDGLMAWETL----KDGPNN-----IDLILTE 93
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++GY LL + E K+IPV++MSS + S++ +C+ +GA +F +KPV+ ++
Sbjct: 94 VDLPLISGYALLTLVMEHDFCKNIPVIMMSSHDSISKVLKCMLKGAADFLIKPVRRNELK 153
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 154 NLWQHVWR 161
>gi|329922247|ref|ZP_08277949.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
gi|328942284|gb|EGG38554.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
Length = 1049
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
+ + S +L VDD ++ K+I LL Y++ AV +AL+ L EQ
Sbjct: 711 LALARPSDGRLLIVDDDPVNLKVIHHLLADEGYRIVAVTRAEEALQLL------EQG--- 761
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+ +LII+D MP M+GY+L R I++ L ++P++++++ N P I+ GA ++
Sbjct: 762 --EWDLIISDVMMPQMSGYELSRTIRQRYMLSELPILLLTARNRPEDIHMGFISGANDYL 819
Query: 121 LKPV 124
+KPV
Sbjct: 820 IKPV 823
>gi|239905594|ref|YP_002952333.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
gi|239795458|dbj|BAH74447.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
Length = 139
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 70/119 (58%), Gaps = 12/119 (10%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
+++HVL VDD++ R +I+ +LK + ++ ++G++A GLL + + ++
Sbjct: 13 NEYHVLIVDDAVPMRNMIKFMLKKIGFNTLSEAENGSEAF---GLLKK--------LTID 61
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
L++ D+ MP + GY LL KI+ SLK +PV+I+S E I + GA ++ LKP+
Sbjct: 62 LVVADWNMPKLNGYQLLEKIRADESLKYLPVIIVSGEGDKEHIVSIIRAGASDYVLKPI 120
>gi|443302655|gb|AGC82269.1| cAMP phosphodiesterase [Acanthamoeba castellanii]
Length = 621
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 85/156 (54%), Gaps = 22/156 (14%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSY-QVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L VDD R ++ +LL+ + Y +V V+SG KA+E + + NL++
Sbjct: 14 ILVVDDEPTARIVVRKLLEKTGYTEVEVVESGRKAIELI-----------ENRSFNLVLC 62
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP + G +++ +++ A + D P+V+MS+ + + +CL EGA+++ LKP+Q
Sbjct: 63 DLHMPDIDGIGVVKAVRKKAHMDDSPIVMMSATEDLNIVYKCLSEGADDYLLKPIQ---A 119
Query: 130 NKLKPHLMKGISKEIKEPNNIN------NKRKGLEE 159
N +K +L + + ++ KE N NK K ++E
Sbjct: 120 NAVK-NLWQNVWRKRKEKETANMLSHERNKSKAMDE 154
>gi|357112782|ref|XP_003558186.1| PREDICTED: two-component response regulator-like PRR73-like
[Brachypodium distachyon]
Length = 766
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V++ R+++ LL+ Y+V + ++G A ++L ED Q +++L++
Sbjct: 82 LRVLLVENDDCTRQVVGALLRKCGYEVISAENGLHAWQYL----EDLQN-----RIDLVL 132
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G LL KI KDIPV++MS + + +CL +GA +F +KP++ +
Sbjct: 133 TEVAMPCLSGISLLSKIMSHKICKDIPVIMMSKNDSMGTVFKCLSKGAVDFLVKPIRKNE 192
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 193 LKNLWQHIWR 202
>gi|218261992|ref|ZP_03476633.1| hypothetical protein PRABACTJOHN_02304 [Parabacteroides johnsonii
DSM 18315]
gi|423343696|ref|ZP_17321409.1| hypothetical protein HMPREF1077_02839 [Parabacteroides johnsonii
CL02T12C29]
gi|218223650|gb|EEC96300.1| hypothetical protein PRABACTJOHN_02304 [Parabacteroides johnsonii
DSM 18315]
gi|409214718|gb|EKN07727.1| hypothetical protein HMPREF1077_02839 [Parabacteroides johnsonii
CL02T12C29]
Length = 372
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 12/141 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
SQ+ VL VDD + L++ +LK Y + DSG KAL +Q NL
Sbjct: 6 SQYTVLVVDDVPTNVMLVQAILKKEGYTLLTTDSGAKALRI-----------AQERHPNL 54
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
I+ D MP M GY++L+ +K + +IPV+IMS+ + I + + GA E+ KP Q
Sbjct: 55 ILLDIMMPEMDGYEVLQHLKSNPETNNIPVIIMSALSDMQSIVKGYQLGATEYVTKPFQR 114
Query: 127 ADVNKLKPHLMKGIS-KEIKE 146
++ K H + S K IK+
Sbjct: 115 EELVKRVAHRYELFSIKRIKQ 135
>gi|330828170|ref|YP_004391122.1| CheY-like receiver [Aeromonas veronii B565]
gi|406678627|ref|ZP_11085802.1| hypothetical protein HMPREF1170_04010 [Aeromonas veronii AMC35]
gi|423201285|ref|ZP_17187865.1| hypothetical protein HMPREF1167_01448 [Aeromonas veronii AER39]
gi|423204149|ref|ZP_17190705.1| hypothetical protein HMPREF1168_00340 [Aeromonas veronii AMC34]
gi|423211141|ref|ZP_17197694.1| hypothetical protein HMPREF1169_03212 [Aeromonas veronii AER397]
gi|328803306|gb|AEB48505.1| CheY-like receiver [Aeromonas veronii B565]
gi|404614143|gb|EKB11147.1| hypothetical protein HMPREF1169_03212 [Aeromonas veronii AER397]
gi|404617857|gb|EKB14791.1| hypothetical protein HMPREF1167_01448 [Aeromonas veronii AER39]
gi|404621740|gb|EKB18606.1| hypothetical protein HMPREF1170_04010 [Aeromonas veronii AMC35]
gi|404627823|gb|EKB24621.1| hypothetical protein HMPREF1168_00340 [Aeromonas veronii AMC34]
Length = 338
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ--VNLII 68
+L VDDS RK+IE L+T+ Y V G + LE + + Q + VN +I
Sbjct: 199 ILVVDDSAFIRKMIETTLRTAGYNVITAKDGGEGLEMMTDFDRLAQEERMPVTGFVNAVI 258
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TD MP M G LL++++++ S K++P+V+ SS + L+ GA + KP ++
Sbjct: 259 TDVEMPRMDGMHLLKRLRDTPSYKEMPIVMFSSLMSDDNRQKALQLGANDTITKP-EIGR 317
Query: 129 VNKLKPHLMKGISKEIKEPNNINN 152
+ + H++ GI+ P+ NN
Sbjct: 318 MVGMMDHMLLGIAP----PSPANN 337
>gi|241205123|ref|YP_002976219.1| response regulator receiver protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859013|gb|ACS56680.1| response regulator receiver protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 276
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ +SG KALE L N D
Sbjct: 136 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEILKA-NRD-------- 186
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ S ++ ++ +SS + R L+ G +F L+
Sbjct: 187 -IGLVITDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 245
Query: 123 P 123
P
Sbjct: 246 P 246
>gi|229590586|ref|YP_002872705.1| putative sensory box GGDEF/EAL domain-containing protein
[Pseudomonas fluorescens SBW25]
gi|229362452|emb|CAY49358.1| putative sensory box GGDEF/EAL domain protein [Pseudomonas
fluorescens SBW25]
Length = 409
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD RKL+E LL+ YQ SG +AL+ + D LI+ D
Sbjct: 8 LLIVDDEPQVRKLLETLLQHEGYQTLTAGSGEEALQLVAQQPPD-----------LILLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MPGM GY++ ++K + IP++++S+ + PS LE GAEEF KPV+
Sbjct: 57 IMMPGMDGYEVASQLKGDETTAGIPIIMLSALSEPSARVNGLEAGAEEFISKPVE 111
>gi|126178188|ref|YP_001046153.1| response regulator receiver sensor signal transduction histidine
kinase [Methanoculleus marisnigri JR1]
gi|125860982|gb|ABN56171.1| response regulator receiver sensor signal transduction histidine
kinase [Methanoculleus marisnigri JR1]
Length = 440
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 15/141 (10%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
++ VL V+DS + I +L+T Y VT V GN+A+ + +V ++
Sbjct: 9 TKMSVLVVEDSRTQAEFIRHVLETEGYDVTLVADGNEAIRRM-----------EVDMPDI 57
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
++TD MPGM GY+L R+IK+ D PV+++++ P+ + + L GA+ F +KPV
Sbjct: 58 VLTDIMMPGMDGYELCRRIKQQNP--DTPVILVTNLFDPADVLKGLASGADSFIVKPVDP 115
Query: 127 ADVNKLKPHLMKGISKEIKEP 147
V +M+ ++EI EP
Sbjct: 116 EHVRSQIEAVMR--TREIPEP 134
>gi|339498727|ref|YP_004696762.1| response regulator receiver protein [Spirochaeta caldaria DSM 7334]
gi|338833076|gb|AEJ18254.1| response regulator receiver protein [Spirochaeta caldaria DSM 7334]
Length = 242
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
M T H+L V+DS + ++++L+ + Y + + G +ALE L Q
Sbjct: 1 MKTSQHKHILIVEDSYVQAAGLQKILEQAGYSIVRAEHGLEALELL-----------QKE 49
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+L+I+D MP M GY L + IK + K +PV++++S + P+ I R +E GA+ F K
Sbjct: 50 HFDLVISDVMMPKMDGYTLCKTIKTNELYKHLPVILVTSLSEPADIIRGIESGADSFIPK 109
Query: 123 PVQLAD--VNKLKPHLMKGIS 141
P + AD + +++ HL I
Sbjct: 110 PYK-ADFLLERVEAHLAGKIG 129
>gi|302796211|ref|XP_002979868.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
gi|300152628|gb|EFJ19270.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
Length = 865
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 9/131 (6%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
VL V+D R ++ LL+ Y+VT SG +A E L +T S V+L+
Sbjct: 108 HLKVLLVEDDDSTRHVVAALLRNCGYEVTPAASGLQAWEIL-------ETRSS--SVDLV 158
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+TD MP ++G +LL KI S K IPVV+MS + + +CL +GA +F +KPV+
Sbjct: 159 LTDLMMPRLSGIELLGKIMSRDSPKRIPVVMMSCLDSMDVVLKCLSKGAVDFLVKPVRKN 218
Query: 128 DVNKLKPHLMK 138
++ L H +
Sbjct: 219 ELKNLWQHFWR 229
>gi|334715191|gb|AEG90651.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 75/129 (58%), Gaps = 9/129 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+VL V+ R+++ LL+ YQV + ++G +A +L ED+Q N +++++
Sbjct: 81 NVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL----EDKQNN-----IDIVLI 131
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
+ MPG++G LL +I K+IPV++MSS + + + +CL +GA +F + P++ ++
Sbjct: 132 EVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNEL 191
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 192 KNLWQHVWR 200
>gi|334715193|gb|AEG90652.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 75/129 (58%), Gaps = 9/129 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+VL V+ R+++ LL+ YQV + ++G +A +L ED+Q N +++++
Sbjct: 81 NVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL----EDKQNN-----IDIVLI 131
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
+ MPG++G LL +I K+IPV++MSS + + + +CL +GA +F + P++ ++
Sbjct: 132 EVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNEL 191
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 192 KNLWQHVWR 200
>gi|334715189|gb|AEG90650.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 75/129 (58%), Gaps = 9/129 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+VL V+ R+++ LL+ YQV + ++G +A +L ED+Q N +++++
Sbjct: 81 NVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL----EDKQNN-----IDIVLI 131
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
+ MPG++G LL +I K+IPV++MSS + + + +CL +GA +F + P++ ++
Sbjct: 132 EVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNEL 191
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 192 KNLWQHVWR 200
>gi|424882057|ref|ZP_18305689.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii WU95]
gi|392518420|gb|EIW43152.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii WU95]
Length = 276
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ +SG KALE L N D
Sbjct: 136 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEILKA-NRD-------- 186
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ S ++ ++ +SS + R L+ G +F L+
Sbjct: 187 -IGLVITDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 245
Query: 123 P 123
P
Sbjct: 246 P 246
>gi|409438987|ref|ZP_11266050.1| Response regulator receiver protein [Rhizobium mesoamericanum
STM3625]
gi|408749647|emb|CCM77228.1| Response regulator receiver protein [Rhizobium mesoamericanum
STM3625]
Length = 268
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ DSG KALE L N D
Sbjct: 128 FLTNHRHHVLIVDDSPTARALLSSRLKRYNFRVSTADSGAKALEILKA-NRD-------- 178
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ S ++ ++ +SS + R L+ G +F L+
Sbjct: 179 -IGLMITDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 237
Query: 123 PV 124
P
Sbjct: 238 PF 239
>gi|424871123|ref|ZP_18294785.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393166824|gb|EJC66871.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 276
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ +SG KALE L N D
Sbjct: 136 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEILKA-NRD-------- 186
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ S ++ ++ +SS + R L+ G +F L+
Sbjct: 187 -IGLVITDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 245
Query: 123 P 123
P
Sbjct: 246 P 246
>gi|340508704|gb|EGR34354.1| hypothetical protein IMG5_014920 [Ichthyophthirius multifiliis]
Length = 545
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVL +D R + +L +YQVT V++G A + LL ED +++++
Sbjct: 12 HVLVAEDDNFQRLALIDVLTLCNYQVTDVENGRLARD--ELLKEDSN-------IDVVLL 62
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP M G++LL ++ L++IPV++MS++N ++ CL GA+++ +KP+++ V
Sbjct: 63 DLWMPEMDGWELLCLMQNYEKLRNIPVIMMSADNEQEKVALCLAHGAKDYLVKPIRIQMV 122
Query: 130 NKLKPHLM 137
+ H++
Sbjct: 123 KGIANHVI 130
>gi|298376717|ref|ZP_06986672.1| two-component system sensor histidine kinase [Bacteroides sp.
3_1_19]
gi|301310020|ref|ZP_07215959.1| two-component system sensor histidine kinase [Bacteroides sp. 20_3]
gi|423340452|ref|ZP_17318191.1| hypothetical protein HMPREF1059_04116 [Parabacteroides distasonis
CL09T03C24]
gi|298266595|gb|EFI08253.1| two-component system sensor histidine kinase [Bacteroides sp.
3_1_19]
gi|300831594|gb|EFK62225.1| two-component system sensor histidine kinase [Bacteroides sp. 20_3]
gi|409227887|gb|EKN20783.1| hypothetical protein HMPREF1059_04116 [Parabacteroides distasonis
CL09T03C24]
Length = 374
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S++ VL VDD + L++ +LK Y + DSG KAL + NE NL
Sbjct: 6 SEYKVLIVDDVPTNVMLVQAILKKEGYTLLTCDSGTKALR---IANEKHP--------NL 54
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
I+ D MP M GY++L+ +K + DIPV+IMS+ + I + + GA E+ KP Q
Sbjct: 55 ILLDIMMPEMDGYEVLQHLKSNPETTDIPVIIMSALSDMQSIVKGYQLGATEYVTKPFQR 114
Query: 127 ADVNKLKPH 135
++ K H
Sbjct: 115 EELVKRVAH 123
>gi|392544812|ref|ZP_10291949.1| sensor histidine kinase [Pseudoalteromonas rubra ATCC 29570]
Length = 1387
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 14/126 (11%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S FHVL VDD + + + +LLK VT D+G ALE L Q Q +L
Sbjct: 1257 SGFHVLLVDDDLRNTYALSKLLKEQGLDVTMADNGQLALEKL----------QQSEQFDL 1306
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
++ D MP M G++ +R I+ S + +P++ ++++ + RCLE GA ++ KPV
Sbjct: 1307 VLMDIMMPIMDGFEAMRHIRADIS-QSLPIIALTAKAMSEDKQRCLEAGASDYLAKPV-- 1363
Query: 127 ADVNKL 132
D+N L
Sbjct: 1364 -DINVL 1368
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
Q N +I D +P M G LL +K + IPV I+S +N + + L++GA +F K
Sbjct: 1033 QPNAVILDIGLPDMDGMALLDTLKSEPKTRQIPVHIVSGKN---KDPKALQKGAIDFLTK 1089
Query: 123 PVQLADVNKLKPHLMKGISKEIK 145
PV L + ++ + K IK
Sbjct: 1090 PVSLDQMEQVFAKFEVLLQKHIK 1112
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L V+D K+I+ +L+ Q+ + G+ A++ L + Q++ I
Sbjct: 1113 HILLVEDDTHACKVIKHVLQQKGLQLHVANDGSTAMQLL-----------KQHQIDCCIV 1161
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK----PVQ 125
D +P ++G++LL K+ A L P++I +++ + L ++ LK PV+
Sbjct: 1162 DLNLPDISGFELLEKMDAEAGLILPPIIIYTAQELSRDEYHQLLRFTDKIVLKTDHAPVR 1221
Query: 126 LADVNKLKPH 135
L D +L H
Sbjct: 1222 LQDEVELFLH 1231
>gi|206889466|ref|YP_002249856.1| Chemotaxis protein CheY [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741404|gb|ACI20461.1| putative Chemotaxis protein CheY [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 124
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL VDD RK+I +LK+ Y+V ++G +AL+ LGL ++NLI+
Sbjct: 1 MKVLIVDDDKTTRKMISLILKSKGYEVVTAENGIEALQKLGLE-----------RINLIL 49
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TD MP M G + +++++ + + +IP+V++++E R E G +++ +KP
Sbjct: 50 TDMNMPYMDGIEFIKQVRANPDIANIPIVMITTEADEDEKRRAFEAGVDDYLVKPTNAEQ 109
Query: 129 VNKLKPHLMKGI 140
+++ ++K I
Sbjct: 110 ISESMKKIVKKI 121
>gi|326522564|dbj|BAK07744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 759
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V++ R ++ LL+ Y+V + ++G A ++L ED Q +++L++
Sbjct: 83 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYL----EDVQN-----RIDLVL 133
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G LL KI + K IPV++MS + S + +CL +GA +F +KP++ +
Sbjct: 134 TEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNE 193
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 194 LKTLWQHIWR 203
>gi|206890474|ref|YP_002248031.1| response regulator [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742412|gb|ACI21469.1| response regulator [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 500
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 11/119 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + KL++ +L Y+V +G ALE L N V++++ D
Sbjct: 8 ILCVDDEPQNLKLLQAILSPRGYEVLVAQNGFLALEILKNQN-----------VDIVLLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MPGM GY++ RKIKE +L+ IPV+++++ R +E G EEF KP + +V
Sbjct: 57 VMMPGMDGYEVCRKIKEDETLRHIPVIMITALTAKEDRIRGIEAGTEEFLSKPFDVGEV 115
>gi|256840897|ref|ZP_05546405.1| two-component system sensor histidine kinase [Parabacteroides sp.
D13]
gi|256738169|gb|EEU51495.1| two-component system sensor histidine kinase [Parabacteroides sp.
D13]
Length = 374
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S++ VL VDD + L++ +LK Y + DSG KAL + NE NL
Sbjct: 6 SEYKVLIVDDVPTNVMLVQAILKKEGYTLLTCDSGTKALR---IANEKHP--------NL 54
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
I+ D MP M GY++L+ +K + DIPV+IMS+ + I + + GA E+ KP Q
Sbjct: 55 ILLDIMMPEMDGYEVLQHLKSNPETTDIPVIIMSALSDMQSIVKGYQLGATEYVTKPFQR 114
Query: 127 ADVNKLKPH 135
++ K H
Sbjct: 115 EELVKRVAH 123
>gi|297825553|ref|XP_002880659.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
gi|297326498|gb|EFH56918.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
Length = 611
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 15/163 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD K++E LL+ Y VT + KALE LL E++ + +L+I+D
Sbjct: 19 VLAVDDDQTCLKILETLLRHCQYHVTTTNEAQKALE---LLRENKN------KFDLVISD 69
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL + D+PV+++S+ + P + + + GA ++ LKPV++ ++
Sbjct: 70 VDMPDMDGFKLLELVGLEM---DLPVIMLSAHSDPKFVMKGVTHGACDYLLKPVRIEELK 126
Query: 131 KLKPHLMKGISKEIKEPNNINNKRKGL--EEIDSADRTRTRLN 171
+ H+++ + + NN +KR G E + +D+ R N
Sbjct: 127 NIWQHVVRSRFDKNRGSNN-GDKRDGSGNEGVGYSDQNNGRAN 168
>gi|150007937|ref|YP_001302680.1| two-component hybrid sensor kinase/response regulator
[Parabacteroides distasonis ATCC 8503]
gi|255013375|ref|ZP_05285501.1| two-component hybrid sensor kinase/response regulator [Bacteroides
sp. 2_1_7]
gi|262381501|ref|ZP_06074639.1| two-component system sensor histidine kinase [Bacteroides sp.
2_1_33B]
gi|410103774|ref|ZP_11298695.1| hypothetical protein HMPREF0999_02467 [Parabacteroides sp. D25]
gi|423331562|ref|ZP_17309346.1| hypothetical protein HMPREF1075_01359 [Parabacteroides distasonis
CL03T12C09]
gi|149936361|gb|ABR43058.1| two-component system sensor histidine kinase, with a response
regulator receiver domain [Parabacteroides distasonis
ATCC 8503]
gi|262296678|gb|EEY84608.1| two-component system sensor histidine kinase [Bacteroides sp.
2_1_33B]
gi|409230132|gb|EKN23000.1| hypothetical protein HMPREF1075_01359 [Parabacteroides distasonis
CL03T12C09]
gi|409236503|gb|EKN29310.1| hypothetical protein HMPREF0999_02467 [Parabacteroides sp. D25]
Length = 374
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S++ VL VDD + L++ +LK Y + DSG KAL + NE NL
Sbjct: 6 SEYKVLIVDDVPTNVMLVQAILKKEGYTLLTCDSGTKALR---IANEKHP--------NL 54
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
I+ D MP M GY++L+ +K + DIPV+IMS+ + I + + GA E+ KP Q
Sbjct: 55 ILLDIMMPEMDGYEVLQHLKSNPETTDIPVIIMSALSDMQSIVKGYQLGATEYVTKPFQR 114
Query: 127 ADVNKLKPH 135
++ K H
Sbjct: 115 EELVKRVAH 123
>gi|356545957|ref|XP_003541399.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 749
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R ++ LL+ SY+V +G +A + L ++ TN ++LI+T+
Sbjct: 85 LVEYDDST--RHVVTALLRNCSYEVIDAANGLQAWKIL-----EDLTN----HIDLILTE 133
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG++G LL KI + K+IPVV+MSS + + +CL +GA +F +KP++ ++
Sbjct: 134 VAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELK 193
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 194 NLWQHVWR 201
>gi|224112925|ref|XP_002316333.1| pseudo response regulator [Populus trichocarpa]
gi|222865373|gb|EEF02504.1| pseudo response regulator [Populus trichocarpa]
Length = 763
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ Y+ TAV +G +A + L L TN ++L++T+
Sbjct: 91 VLLVENDDSTRHVVSALLRNCGYEATAVANGLQAWKLLQDL-----TN----HIDLVLTE 141
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL I + ++IPV++MSS + + + RCL +GA +F +KP++ ++
Sbjct: 142 VAMPCLSGIGLLSNIMSHKTCRNIPVIMMSSHDSMNVVFRCLSKGAVDFLVKPIRKNELK 201
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 202 ILWQHVWR 209
>gi|118638618|gb|ABL09465.1| pseudo-response regulator [Triticum aestivum]
gi|379025584|dbj|BAL63569.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025586|dbj|BAL63570.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025588|dbj|BAL63571.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025590|dbj|BAL63572.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025592|dbj|BAL63573.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025594|dbj|BAL63574.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025596|dbj|BAL63575.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025598|dbj|BAL63576.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025600|dbj|BAL63577.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025602|dbj|BAL63578.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025604|dbj|BAL63579.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025606|dbj|BAL63580.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025608|dbj|BAL63581.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025610|dbj|BAL63582.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025612|dbj|BAL63583.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025614|dbj|BAL63584.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025616|dbj|BAL63585.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025618|dbj|BAL63586.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025620|dbj|BAL63587.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025632|dbj|BAL63593.1| pseudo-response regulator [Triticum durum]
gi|379025634|dbj|BAL63594.1| pseudo-response regulator [Triticum durum]
gi|379025636|dbj|BAL63595.1| pseudo-response regulator [Triticum durum]
gi|379025640|dbj|BAL63597.1| pseudo-response regulator [Triticum durum]
gi|456359214|dbj|BAM93436.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359216|dbj|BAM93437.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 266
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 73/129 (56%), Gaps = 12/129 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 42 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCMPG-MTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G ++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|52783225|sp|Q6LA42.2|APRR5_ARATH RecName: Full=Two-component response regulator-like APRR5; AltName:
Full=Pseudo-response regulator 5
gi|9758535|dbj|BAB08930.1| unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5 protein [Arabidopsis thaliana]
gi|23506027|gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana]
Length = 558
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R++I LL+ SY+V AV G KA E L E V+LI+T+
Sbjct: 54 LVEADDST--RQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPES---------VDLILTE 102
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++GY LL I E K+IPV++MS+++ + + +C+ +GA ++ +KP++ ++
Sbjct: 103 VDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELR 162
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 163 NLWQHVWR 170
>gi|399035550|ref|ZP_10732965.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. CF122]
gi|398066681|gb|EJL58240.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. CF122]
Length = 276
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ DSG KALE L N D
Sbjct: 136 FLTNHRHHVLIVDDSPTARALLSSRLKRYNFRVSTADSGAKALEILKA-NRD-------- 186
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ S ++ ++ +SS + R L+ G +F L+
Sbjct: 187 -IGLMITDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 245
Query: 123 PV 124
P
Sbjct: 246 PF 247
>gi|218463677|ref|ZP_03503768.1| two-component response regulator protein [Rhizobium etli Kim 5]
Length = 262
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ DSG KALE L N D
Sbjct: 122 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSVADSGGKALEILK-ANRD-------- 172
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ + ++ ++ +SS + R L+ G +F L+
Sbjct: 173 -IGLMITDYNMPDIDGFELTRRIRANIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 231
Query: 123 P 123
P
Sbjct: 232 P 232
>gi|85858057|ref|YP_460259.1| signal transduction histidine kinase [Syntrophus aciditrophicus SB]
gi|85721148|gb|ABC76091.1| signal transduction histidine kinase [Syntrophus aciditrophicus SB]
Length = 725
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV 61
G V++ +L V+DS + ++ +L+ + YQ V +G +A+ FL L D
Sbjct: 5 GTVSNRAGEILIVEDSPTQAEHLKHILEETGYQTEHVRNGREAVRFLSLTRPD------- 57
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
LII+D MP M GY L R +K L+ IPV++++ + P + R LE GA++F
Sbjct: 58 ----LIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFIT 113
Query: 122 KPVQLADVNKLKPHLMKGISK 142
KP + + L+ G+ +
Sbjct: 114 KPCKDVVLASHVKRLLSGVKR 134
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 15/122 (12%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDD ++ + L+T Y+VT + + +ALE +T S +LIIT
Sbjct: 603 HILFVDDETALVEMGQETLRTLGYRVTGICNSLEALETF------RRTPS---LFDLIIT 653
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMS--SENIPSRINRCLEEGAEEFFLKPVQLA 127
D MP MTG L R + + DIP+++ + SE I + + E G EF +KP+ +
Sbjct: 654 DMTMPQMTGTVLSRHLLQIRG--DIPIILCTGYSEFITEKEAK--ELGIREFIMKPLFMK 709
Query: 128 DV 129
++
Sbjct: 710 EL 711
>gi|345859615|ref|ZP_08811956.1| his Kinase A domain protein [Desulfosporosinus sp. OT]
gi|344327299|gb|EGW38736.1| his Kinase A domain protein [Desulfosporosinus sp. OT]
Length = 990
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 10/115 (8%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
F VLAVDD + ++++ LL Y+V SG +A+E + + D+ ++L++
Sbjct: 659 FKVLAVDDEATNLRVLKSLLTGDGYKVLTASSGIEAIEIIK--DHDD--------IDLVL 708
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D MP M+GY+ RKI+E SL D+P++I++ N I E GA +F KP
Sbjct: 709 MDVMMPKMSGYEACRKIREDYSLYDLPLLILTVRNTLEDITVGFEAGANDFVSKP 763
>gi|118351764|ref|XP_001009157.1| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|89290924|gb|EAR88912.1| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 818
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 73/127 (57%), Gaps = 9/127 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVL +D R + +L YQVTAV++G A + LL +D +++++
Sbjct: 4 HVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARD--ELLKQDSN-------IDIVLL 54
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP M G++LL ++E +L+ IPV++MSS+ ++ C+ +GA+++ KP+++ +V
Sbjct: 55 DLYMPEMDGFELLSLMQEHENLQKIPVIMMSSDKEEEKVATCIAKGAKDYIFKPLRVQNV 114
Query: 130 NKLKPHL 136
+ ++
Sbjct: 115 KAIAKYV 121
>gi|376297750|ref|YP_005168980.1| response regulator receiver modulated CheW protein [Desulfovibrio
desulfuricans ND132]
gi|323460312|gb|EGB16177.1| response regulator receiver modulated CheW protein [Desulfovibrio
desulfuricans ND132]
Length = 317
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 77/139 (55%), Gaps = 10/139 (7%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI- 62
V + VL DDS + RK+I +L T+ ++V A ++G AL++L L ++ ++ +
Sbjct: 178 VAHRNYRVLLADDSTMARKMIANILTTAGFKVHAEENGELALQYL--LKAKARSRAEGMP 235
Query: 63 ---QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEF 119
VNL++TD MP M G+ L R+IKE L+ +PV++ SS + ++ + GA+
Sbjct: 236 LAHYVNLVVTDIEMPSMDGHSLTRRIKEDTDLRHLPVILCSSIITATLHHKGIAVGADAQ 295
Query: 120 FLKPVQLADVNKLKPHLMK 138
K A++ +L P +K
Sbjct: 296 ISK----AELGELAPRALK 310
>gi|159487595|ref|XP_001701808.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
gi|158281027|gb|EDP06783.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
Length = 610
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 28/153 (18%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
FHV+ V+D I K++E+LL+ SY+V+ G AL+ L + +V+LI+
Sbjct: 6 FHVVLVEDDNICLKVVEQLLRKLSYRVSTASDGAAALKVLA------DCKQRGDKVDLIL 59
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVV----------------------IMSSENIPS 106
TD MP +TG+DL+ ++ + DIPVV +MSS++
Sbjct: 60 TDILMPEVTGFDLINEVVHGETFADIPVVASGTFLGFGRRTVRTVAWSRCQVMSSQDSQE 119
Query: 107 RINRCLEEGAEEFFLKPVQLADVNKLKPHLMKG 139
+ + + GA ++ +KP++ ++ L H+ +
Sbjct: 120 SVLQAFQAGAADYLIKPIRKNELATLWQHVWRA 152
>gi|357121369|ref|XP_003562393.1| PREDICTED: two-component response regulator-like PRR37-like
[Brachypodium distachyon]
Length = 660
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A L +D Q N ++L++++
Sbjct: 23 VLLVETDDSTRQIVTALLRHCMYQVIPAENGDQAWARL----QDMQDN-----IDLVLSE 73
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG++G LL KI KDIPV++MSS + + +CL GA +F +KP++ ++
Sbjct: 74 VVMPGLSGISLLEKIMAHNVCKDIPVIMMSSNDAMGTVFKCLSTGAVDFLVKPIRKNELK 133
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 134 NLWQHVWR 141
>gi|334136361|ref|ZP_08509829.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
gi|333606089|gb|EGL17435.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
Length = 1054
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDD I+ +++E +L Y+VT V SG +AL L D L+I+
Sbjct: 718 HLLIVDDDPINLQVLETILPPEEYEVTLVTSGKEALAVLDTKEWD-----------LVIS 766
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP M+GY+L R I++ +L ++P++++++ + P I GA ++ KPV+ ++
Sbjct: 767 DIMMPQMSGYELTRIIRKRFTLTELPILLLTARSQPKDIQSGFLAGANDYVTKPVEAIEI 826
>gi|398797682|ref|ZP_10557002.1| signal transduction histidine kinase [Pantoea sp. GM01]
gi|398102408|gb|EJL92589.1| signal transduction histidine kinase [Pantoea sp. GM01]
Length = 1195
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
HVL VDD +R L+ + L+ +QV A +SG +ALE L + ++LI
Sbjct: 959 MHVLIVDDHSPNRLLLTQQLEMMGHQVIAAESGEQALEIL----------HSGVAIDLIT 1008
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDI---PVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
TD MPGM G++L R I++ +I P++ +++ S +++C E G E KPV+
Sbjct: 1009 TDVTMPGMDGFELTRHIRQWELQHNIASKPILGLTAHAQSSVVDKCREAGMNECLFKPVR 1068
Query: 126 LADVNKLKPHLM 137
A ++ LM
Sbjct: 1069 SAQLHDAVNRLM 1080
>gi|296089013|emb|CBI38716.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL+ SY+V AV G KA E L + E N V+LI+
Sbjct: 3 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEAL----KGEPQN-----VDLIL 53
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++G+ LL I E K IPV++MSS + S + +C+ +GA +F +KPV+ +
Sbjct: 54 TEVELPSISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNE 113
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 114 LRNLWQHVWR 123
>gi|168069753|ref|XP_001786566.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162660993|gb|EDQ48622.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 717
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 65/114 (57%), Gaps = 10/114 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD ++ +++ LL Y++ +G +ALE + + Q+ ++L+I D
Sbjct: 402 VLMVDDDPVNLQVLRNLLALEGYRLMTASNGQEALEKI----QSGQS------IDLVIAD 451
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+ MPGM+G DL R ++ SL +P++++++ ++P + L GA +F KPV
Sbjct: 452 WMMPGMSGLDLCRSVRRQFSLSALPILLLTARSLPEDVRIGLSAGANDFLRKPV 505
>gi|456359250|dbj|BAM93454.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359252|dbj|BAM93455.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359254|dbj|BAM93456.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359256|dbj|BAM93457.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359258|dbj|BAM93458.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
Length = 331
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 73/129 (56%), Gaps = 12/129 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 88
Query: 71 YCMPG-MTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G ++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 89 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 148
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 149 KNLWAHVWR 157
>gi|218662845|ref|ZP_03518775.1| two-component response regulator protein [Rhizobium etli IE4771]
Length = 274
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ DSG KALE L N D
Sbjct: 128 FLTNQRHHVLIVDDSATARALLSSRLKRYNFRVSVADSGGKALEILK-ANRD-------- 178
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ + ++ ++ +SS + R L+ G +F L+
Sbjct: 179 -IGLMITDYNMPDIDGFELTRRIRANIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 237
Query: 123 PV 124
P
Sbjct: 238 PF 239
>gi|427719936|ref|YP_007067930.1| response regulator receiver sensor signal transduction histidine
kinase [Calothrix sp. PCC 7507]
gi|427352372|gb|AFY35096.1| response regulator receiver sensor signal transduction histidine
kinase [Calothrix sp. PCC 7507]
Length = 425
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 13/128 (10%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
MVTD Q ++ VDD+ + K++ L+ S ++V SG ALE L Q +
Sbjct: 1 MVTDKQSLIMIVDDNPTNTKVLFDFLQVSGFRVLVAKSGESALEKL-----------QAV 49
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFL 121
+LI+ D MPG+ G++ R+ KE ++IPV+ M++ ++ ++ + L GA ++
Sbjct: 50 TPDLILLDVMMPGIDGFETCRRFKEQEHTQNIPVIFMTALSDVVDKV-KGLSLGAVDYIT 108
Query: 122 KPVQLADV 129
KP+QL DV
Sbjct: 109 KPIQLEDV 116
>gi|428302090|ref|YP_007140396.1| response regulator receiver protein [Calothrix sp. PCC 6303]
gi|428238634|gb|AFZ04424.1| response regulator receiver protein [Calothrix sp. PCC 6303]
Length = 146
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQ--VTAVDSGNKALEFLGLLNEDEQTNSQ 60
M T + +L V+DS D K+++RL++ Q + SG++ALEFL + D ++
Sbjct: 1 MRTQFKEPLLIVEDSNEDFKILQRLMQRLDVQNPIYRCSSGDEALEFLERIGNDNNSDIS 60
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+ ++I+ D +PG+ G D+L +IK+ K+IPVVI ++ + P I C ++GA +
Sbjct: 61 S-KPSVILLDLNLPGIDGRDILSQIKQDNKFKEIPVVIFTTSSNPKDIELCYQKGANGYL 119
Query: 121 LKPVQLADVNKL 132
+KP+ ++ K+
Sbjct: 120 IKPMNADELKKI 131
>gi|225453624|ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 641
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL+ SY+V AV G KA E L + E N V+LI+
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEAL----KGEPQN-----VDLIL 101
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++G+ LL I E K IPV++MSS + S + +C+ +GA +F +KPV+ +
Sbjct: 102 TEVELPSISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNE 161
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 162 LRNLWQHVWR 171
>gi|77548762|gb|ABA91559.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 699
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R+++ LL+ Y+V AV G KA G++ E + +L++
Sbjct: 44 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAW---GVMRE------RAYAFDLVL 94
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G +LL +I S K+IPV++MSS++ + RC+++GA +F +KPV+ +
Sbjct: 95 TEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKPVRKNE 154
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 155 LRNLWQHVWR 164
>gi|356554367|ref|XP_003545518.1| PREDICTED: uncharacterized protein LOC100788701 [Glycine max]
Length = 325
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 37/43 (86%)
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
IT YCMP MT YDLL+KIKES L++I VVIMSSEN+PSRIN+
Sbjct: 283 ITYYCMPSMTSYDLLKKIKESLCLRNILVVIMSSENVPSRINK 325
>gi|403374229|gb|EJY87054.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 834
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
M T +++L +D R + +L+ Y+VT V++G KAL L +
Sbjct: 1 MATQRTYNILLAEDEQFQRLALYDILELCDYEVTTVENGKKALVEL---------RDETR 51
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ +L++ D MP M G++LL ++E L +PVV+MS++ I CL GA+++ +K
Sbjct: 52 EFDLVLLDLYMPEMDGFELLTLMQEDEKLSLLPVVVMSADGDKDIIANCLRMGAKDYLVK 111
Query: 123 PVQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTIDINNDG 180
PV+ + L H+ S K ++ E+I D T D + +DG
Sbjct: 112 PVRFQECKGLVRHMSVTASSADKSEKGLHK----YEKIRYVDGGATGQIDLVRSKHDG 165
>gi|224121124|ref|XP_002318502.1| pseudo response regulator [Populus trichocarpa]
gi|222859175|gb|EEE96722.1| pseudo response regulator [Populus trichocarpa]
Length = 529
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R++I LL+ SY+V +V G KA E L + ++LI+T+
Sbjct: 69 LVEADDST--RQIIAALLRKCSYRVVSVPDGLKAWEIL---------KGRPHGIDLILTE 117
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++GY LL I E K+IPV++MSS++ S + +C+ GA ++ +KP++ ++
Sbjct: 118 VDLPSISGYPLLTIIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPLRKNELR 177
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 178 NLWQHVWR 185
>gi|297566255|ref|YP_003685227.1| response regulator receiver protein [Meiothermus silvanus DSM 9946]
gi|296850704|gb|ADH63719.1| response regulator receiver protein [Meiothermus silvanus DSM 9946]
Length = 122
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 15/115 (13%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI--QVNLII 68
V+ VDDS+ D K E +L +S++V L E QVI + ++I+
Sbjct: 4 VMIVDDSMADLKYAESILTAASHRVM-------------LCPSSEGIEQQVISSKPDVIL 50
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D MPG +GY++LR ++ + KDIPVV++SS+ P+ I +GA E+ +KP
Sbjct: 51 LDIVMPGRSGYEILRSLRRTEGAKDIPVVVISSKGQPTDIEWGKRQGAAEYLVKP 105
>gi|376295008|ref|YP_005166238.1| response regulator receiver, CheY [Desulfovibrio desulfuricans
ND132]
gi|323457569|gb|EGB13434.1| response regulator receiver, CheY [Desulfovibrio desulfuricans
ND132]
Length = 122
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS R L+ ++K ++VT + G LE L L+ V+LI++
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKLYSLS----------HVDLIVS 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G ++ ++E A+ +DIP+V++S+E I L GA + +KP Q
Sbjct: 54 DVNMPRMDGLTFIKTVREQAAYRDIPIVVLSTEGQDKDIQTGLTVGANLYMIKPAQ 109
>gi|308274604|emb|CBX31203.1| hypothetical protein N47_E47150 [uncultured Desulfobacterium sp.]
Length = 470
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
V+ VDDS + RK++ + L+ +QV ++G AL + +S + +LI++D
Sbjct: 143 VMVVDDSAMIRKIVGQGLEKKGFQVITAENGKAALALI---------DSNL--PHLILSD 191
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
MP M GY R + E + L DIP V+MS SR+ R L GAE + KP +
Sbjct: 192 VNMPEMDGYAFCRAVHEDSGLSDIPFVVMSVRQEMSRVRRMLSLGAEAYLFKPFNI 247
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS RK+I L T ++ + G L D +N V +L++TD
Sbjct: 16 ILIVDDSPTMRKVIILQLSTLDVEILVANDGR-------LHGFDMVSNHPV---DLVVTD 65
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G L +K++ IP+VI SS + I + GA + K
Sbjct: 66 VDMPQMDGITLCKKLQADPKTDAIPIVIQSSFDSELNIEKGFNAGASAYISK-------K 118
Query: 131 KLKPHLMKGISKEIKEPNNINNKRKGLEEIDSA 163
+L L+ G + + ++IN R+ + DSA
Sbjct: 119 ELTTSLV-GTVRSLLRKSSINRTRRVMVVDDSA 150
>gi|121997279|ref|YP_001002066.1| response regulator receiver protein [Halorhodospira halophila SL1]
gi|121588684|gb|ABM61264.1| response regulator receiver protein [Halorhodospira halophila SL1]
Length = 133
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQV 61
M D +L VDD R++I+ LL+ Y V D GN AL L Q
Sbjct: 1 MAADKNIKILVVDDFSTMRRIIKNLLRELGYNNVVEADDGNTALPIL-----------QK 49
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
+ +ITD+ MPGMTG +LL+ ++ +LKD+P +++++E +I + G + +
Sbjct: 50 GGIQFLITDWNMPGMTGLELLKHVRADPNLKDLPTLMVTAEAKREQIMEAAQAGVNGYIV 109
Query: 122 KPVQLA 127
KP A
Sbjct: 110 KPFTAA 115
>gi|242280189|ref|YP_002992318.1| response regulator receiver protein [Desulfovibrio salexigens DSM
2638]
gi|242123083|gb|ACS80779.1| response regulator receiver protein [Desulfovibrio salexigens DSM
2638]
Length = 122
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS R L+ ++K ++VT + G LE L L+ +V+LII+
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKLYSLD----------KVDLIIS 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G+ ++ ++E + KDIP++++S+E I L GA + +KP Q
Sbjct: 54 DVNMPRMDGFTYIKTVREQDAYKDIPIIVLSTEGQEKDIQTGLSLGANLYMVKPAQ 109
>gi|168065344|ref|XP_001784613.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
gi|162663845|gb|EDQ50588.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
Length = 425
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 9/140 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+L V+ R ++ LL+ Y+VTAV +G+ A L ED +N +L++
Sbjct: 12 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLL----EDANSN-----FDLVL 62
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TD MP ++G LL K+ + + + +P+VIMSS + + RCL +GA ++ +KPV+ +
Sbjct: 63 TDVVMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNE 122
Query: 129 VNKLKPHLMKGISKEIKEPN 148
+ L H+ + ++P+
Sbjct: 123 LRNLWQHVWRKCHSLDQQPD 142
>gi|428217823|ref|YP_007102288.1| response regulator receiver protein [Pseudanabaena sp. PCC 7367]
gi|427989605|gb|AFY69860.1| response regulator receiver protein [Pseudanabaena sp. PCC 7367]
Length = 243
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 28/180 (15%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+ VL VDDS ++R + R L+ ++T G +AL+ L + Q+ +LI+
Sbjct: 6 YSVLIVDDSEMNRDTLARRLRQQGCKITMAADGKEALKIL---------SKQLF--DLIL 54
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
D MP + GY +L K+K S +L+ +PV+++S+ + RC+E GAE++ KP D
Sbjct: 55 LDIMMPEVDGYTVLGKVKASETLQHMPVIMISALEELDSVMRCMEMGAEDYLTKPF---D 111
Query: 129 VNKLKPHLMKGISK--------------EIKEPNNINNKRKGLEEIDSADRTRTRLNDTI 174
LK + + +SK + +P + ++ L+ + RTR N ++
Sbjct: 112 PVLLKAAIARSLSKNPPRATTAPEIPAAPLAKPQQMGGQKTTLQSSSTTPRTRQPTNPSL 171
>gi|148656813|ref|YP_001277018.1| putative PAS/PAC sensor protein [Roseiflexus sp. RS-1]
gi|148568923|gb|ABQ91068.1| putative PAS/PAC sensor protein [Roseiflexus sp. RS-1]
Length = 969
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDD R++++ LL + Y+V+ +G +AL +L L+ D L++
Sbjct: 6 HILVVDDDASVRRMLQILLSNAGYRVSLATTGEEALAYLELVTPD-----------LVLL 54
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D +PG++G ++ +IK IPV++++ + P L+ GA++F +KPV LA++
Sbjct: 55 DVALPGVSGRQVMERIKSDPDRPFIPVILVTGHSDPEAKVAALDAGADDFLVKPVDLAEL 114
>gi|403381658|ref|ZP_10923715.1| two-component hybrid sensor and regulator [Paenibacillus sp. JC66]
Length = 1052
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 11/122 (9%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+V H+LAVDD ++ K++ +L+ + + SG +ALE LNE
Sbjct: 717 LVAKGTVHILAVDDDPVNLKVLTSILEKDEFHIETASSGVEALE---RLNERPW------ 767
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+L+I D MP M+GYD ++++E S+ ++PV+++++ + P I GA ++ K
Sbjct: 768 --DLLIVDVMMPYMSGYDFTKRVREEFSISELPVLLLTARSQPQDIYTGFLSGANDYVTK 825
Query: 123 PV 124
PV
Sbjct: 826 PV 827
>gi|319787299|ref|YP_004146774.1| multi-sensor hybrid histidine kinase [Pseudoxanthomonas suwonensis
11-1]
gi|317465811|gb|ADV27543.1| multi-sensor hybrid histidine kinase [Pseudoxanthomonas suwonensis
11-1]
Length = 736
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 16/125 (12%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
VL DD +R +++RLL+ + ++VT V G + L+ + + + D + +
Sbjct: 465 QVLVADDYEANRMVLQRLLQKAGHKVTCVAGGEEVLDAMAVRDYD-----------VAVV 513
Query: 70 DYCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV--- 124
D MPG++G DLLR+++ ++ PVVI+S++ P I RC + GA F KPV
Sbjct: 514 DLHMPGISGLDLLRQLRVIQAGGGPQTPVVILSADVTPESIQRCEKAGAYAFLAKPVAAS 573
Query: 125 QLADV 129
+L DV
Sbjct: 574 RLLDV 578
>gi|281308384|gb|ADA58340.1| pseudo-response regulator 3 [Brassica rapa]
Length = 492
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LLK SY+VTAV LE +L EDE + ++L++T+
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEVTAVPD---VLEAWKVL-EDENS-----CIDLVLTE 116
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP +G LL KI +LK+IPV++MSS + + +CL GA +F +KP++ ++
Sbjct: 117 VVMPVNSGTGLLSKIMSHQTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELK 176
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 177 NLWQHVWR 184
>gi|148284174|ref|YP_001248264.1| response regulator PleD [Orientia tsutsugamushi str. Boryong]
gi|146739613|emb|CAM79396.1| PleD-like response regulator, receivor domain/GGDEF domain
[Orientia tsutsugamushi str. Boryong]
Length = 489
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 23/151 (15%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD +RKL+E L T Y V +G +A++ L + I++++++ D
Sbjct: 5 ILVVDDLEYNRKLLETKLLTEYYTVYTAANGQEAIKIL-----------EAIKIDVVLLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPVQ---- 125
MPGM G++L + IK + IPV+I+++ +I ++ + LE GA+EF KP++
Sbjct: 54 IVMPGMDGFELCKAIKSNQDTAHIPVIIITALSDIEDKV-KGLECGADEFLTKPIEDISL 112
Query: 126 LADVNKLKPHLMKGISKEIK----EPNNINN 152
A V L MK +S +IK N INN
Sbjct: 113 FARVKSLVR--MKAVSNQIKLRSITYNQINN 141
>gi|114776750|ref|ZP_01451793.1| Periplasmic Sensor Hybrid Histidine Kinase [Mariprofundus
ferrooxydans PV-1]
gi|114552836|gb|EAU55267.1| Periplasmic Sensor Hybrid Histidine Kinase [Mariprofundus
ferrooxydans PV-1]
Length = 841
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 69/121 (57%), Gaps = 10/121 (8%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
H+L +D+ +++++++ +LK + + V + G +AL+ L + Q +L++
Sbjct: 584 LHILLAEDNAVNQEVMQEVLKKAGHNVQLAEDGEQALDAL----------AGDTQFDLVL 633
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
D MP +G D+L++ + + PV+++S++ +P I C++ GA ++ KPVQLA
Sbjct: 634 LDMNMPKASGLDVLKQFRFMDTTGKTPVLMLSADALPDTIRECMDAGANDYLTKPVQLAS 693
Query: 129 V 129
+
Sbjct: 694 L 694
>gi|418936408|ref|ZP_13490126.1| response regulator receiver protein [Rhizobium sp. PDO1-076]
gi|375056836|gb|EHS53042.1| response regulator receiver protein [Rhizobium sp. PDO1-076]
Length = 274
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ DSG KA+E L +TN +
Sbjct: 136 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSLADSGAKAIEIL-------KTNPDI- 187
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
L++TDY MP + G++L R+I+ ++ ++ +SS N R L+ G +F L+
Sbjct: 188 --GLVVTDYNMPDIDGFELTRRIRSVRGSHELRIIGVSSSNNRLLSARFLKVGGNDFMLR 245
Query: 123 P 123
P
Sbjct: 246 P 246
>gi|255568450|ref|XP_002525199.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223535496|gb|EEF37165.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 762
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ SY+V +G +A L ++ TN Q++L++T+
Sbjct: 90 VLLVENDYSTRHVVTALLRNCSYEVIEATNGLQAWRIL-----EDLTN----QIDLVLTE 140
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI + K++PV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 141 VVMPCLSGIGLLYKIMSHKTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELK 200
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 201 NLWQHVWR 208
>gi|119487004|ref|ZP_01620876.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
gi|119455933|gb|EAW37067.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
Length = 355
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD+ ++R L+ R + YQV +G +ALE + SQ ++L++ D
Sbjct: 10 VLIVDDNEVNRDLLARRITREGYQVMLASNGFEALEMM---------RSQ--PLDLVLLD 58
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M GY +L +K SL+ IP++++S+ N + RC+E GAE++ KP
Sbjct: 59 IMMPQMNGYQVLEAVKADQSLRYIPMIMISAVNDIESVVRCIELGAEDYLSKP 111
>gi|424029601|ref|ZP_17769126.1| his Kinase A domain protein [Vibrio cholerae HENC-01]
gi|408886221|gb|EKM24903.1| his Kinase A domain protein [Vibrio cholerae HENC-01]
Length = 1200
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD I+R L +R + SG +A+E L E Q+++ + +L+ITD
Sbjct: 969 VLVVDDDAINRLLFKRQFEKLGVNCQLAASGIEAIEVL----EQAQSDNTITSFSLVITD 1024
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY L + +K + IPVV ++EN + I + G E KP L D+
Sbjct: 1025 CHMPDMDGYQLTKALKADSKFASIPVVACTAENSRNVIEKAEHNGMETVLFKPYNLGDLQ 1084
Query: 131 KL-KPHLMKGISKEIKE 146
L + +L + + E +E
Sbjct: 1085 ALCEQYLSRAFNSERQE 1101
>gi|288940404|ref|YP_003442644.1| response regulator receiver modulated CheW protein [Allochromatium
vinosum DSM 180]
gi|288895776|gb|ADC61612.1| response regulator receiver modulated CheW protein [Allochromatium
vinosum DSM 180]
Length = 307
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS++ RK IER + ++ + G ALE+L L E + ++ + L+I D
Sbjct: 182 ILVVDDSLVARKQIERAITALGFRTESRSDGKAALEYLEELAEADMVDASI---ELVIAD 238
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY L RKI+E A LK + V++ SS + ++ GA++F K D N
Sbjct: 239 IEMPRMDGYTLTRKIREHAKLKHLCVILHSSLSGQFNVDMVKRAGADDFLAK----FDPN 294
Query: 131 KLKPHLMK 138
+L ++K
Sbjct: 295 ELGATVLK 302
>gi|334188508|ref|NP_001190575.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009895|gb|AED97278.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 522
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LLK SY+VTAV +A L EDE++ ++L++T+
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRIL----EDEKSC-----IDLVLTE 116
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP +G LL KI +LK+IPV++MSS + + +CL GA +F +KP++ ++
Sbjct: 117 VDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELK 176
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 177 NLWQHVWR 184
>gi|220907975|ref|YP_002483286.1| response regulator receiver sensor signal transduction histidine
kinase [Cyanothece sp. PCC 7425]
gi|219864586|gb|ACL44925.1| response regulator receiver sensor signal transduction histidine
kinase [Cyanothece sp. PCC 7425]
Length = 381
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 16/118 (13%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV--NLI 67
H+L VDDS + LI+ +L++ Y+V+ G ALE QV+ +L+
Sbjct: 14 HILVVDDSADNLFLIQTILESEGYEVSTATHGKAALE-------------QVVNAPPDLV 60
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
+ D MPGM GY++ R+I+ + SL +P++++++ + P R+ L+ GA++F KPV+
Sbjct: 61 LLDVMMPGMNGYEVTRRIRLNKSLPFMPILLITAHDRP-RVAEGLDLGADDFIRKPVE 117
>gi|94987584|ref|YP_595517.1| CheY-like receiver [Lawsonia intracellularis PHE/MN1-00]
gi|442556438|ref|YP_007366263.1| response regulator receiver protein [Lawsonia intracellularis N343]
gi|94731833|emb|CAJ55196.1| CheY-like receiver [Lawsonia intracellularis PHE/MN1-00]
gi|441493885|gb|AGC50579.1| response regulator receiver protein [Lawsonia intracellularis N343]
Length = 122
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS R L+ + K+ YQVT + G LE L V +V+LI++
Sbjct: 4 HILVVDDSKTVRNLMSFVFKSKGYQVTTAEDGLDGLEKL----------YSVDKVDLIVS 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G+ ++ ++E ++IP++I+S+E I + ++ GA + +KP Q
Sbjct: 54 DINMPRMDGFTFIKSVREQDLYRNIPIIILSTEKEDEDIKKGMKFGANLYMVKPAQ 109
>gi|390992972|ref|ZP_10263178.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372552287|emb|CCF70153.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 721
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 13/118 (11%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+L DD +R +++RLL+ + ++VT VD G + L+ L + D + I
Sbjct: 458 LQILVADDHAANRMVLQRLLQKAGHKVTCVDGGEQVLDTLADADFD-----------VAI 506
Query: 69 TDYCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MPG++G DLL++++ ++ S PVV++S++ P I C + GA F KPV
Sbjct: 507 VDLHMPGVSGLDLLKQLRVMQAGSQPRTPVVVLSADVTPEAIRSCEQAGAYAFLAKPV 564
>gi|428217824|ref|YP_007102289.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena sp. PCC 7367]
gi|427989606|gb|AFY69861.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena sp. PCC 7367]
Length = 334
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 12/116 (10%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
F++L VDD+ ++R ++ R L YQ + A ++G +ALE L N D LI
Sbjct: 7 FNLLIVDDNEMNRDVLRRHLVRQGYQQILAAENGKEALEMLSGHNFD-----------LI 55
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+ D MP M GY+LL +K L IPV+++S+ + + RC+E GAE++ KP
Sbjct: 56 LLDIQMPQMNGYELLAYLKADLKLSHIPVIMISAVDEIDSVVRCIEMGAEDYLHKP 111
>gi|330794882|ref|XP_003285505.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
gi|325084508|gb|EGC37934.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
Length = 729
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S+ +L VDD + RK++E LLK Y VT V +G A + +S + +L
Sbjct: 107 SKVRILVVDDDDVQRKVLENLLKKFHYNVTLVSNGEIAWD---------NISSGQQKYDL 157
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI-NRCLEEGAEEFFLKPV 124
++TD MP +TG+DLL++I + K+IPV++MS + + N ++ G ++F KP+
Sbjct: 158 VLTDVMMPHITGFDLLQRINDHPIYKNIPVILMSGTAVDYKYANDTIKIGGQDFLTKPI 216
>gi|187920903|ref|YP_001889935.1| integral membrane sensor hybrid histidine kinase [Burkholderia
phytofirmans PsJN]
gi|187719341|gb|ACD20564.1| integral membrane sensor hybrid histidine kinase [Burkholderia
phytofirmans PsJN]
Length = 721
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 15/118 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD I+R ++ LL + ++G +ALE +Q + LI+TD
Sbjct: 514 VLVVDDVEINRAIVVDLLGRLGFDTVEAENGREALE-----------KAQRERPALILTD 562
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL--EEGAEEFFLKPVQL 126
MP M G+DL R ++ S + D+P+V MS+ PS +NR + E GA F KPV L
Sbjct: 563 IVMPEMNGFDLTRNLRRSQAFADVPIVAMSAS--PSGVNRAMSIEAGANAFLSKPVDL 618
>gi|373458202|ref|ZP_09549969.1| integral membrane sensor hybrid histidine kinase [Caldithrix abyssi
DSM 13497]
gi|371719866|gb|EHO41637.1| integral membrane sensor hybrid histidine kinase [Caldithrix abyssi
DSM 13497]
Length = 748
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 10/123 (8%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+VL +DD+ I+R +++L+ + QVT +S KALE L +TN + +LII
Sbjct: 482 LNVLLIDDNPINRSYFQKILEKNKLQVTTAESAFKALEIL-------KTNQRF---DLII 531
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TD MP M G++L +I+ + K +P+++++S + RC + G + KPV+L D
Sbjct: 532 TDAQMPEMDGFELSTQIRALKNYKKVPIILLTSSGMRGDSERCKQIGINAYLPKPVKLTD 591
Query: 129 VNK 131
K
Sbjct: 592 FLK 594
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ H+L +D+ +++KL RLL+ + Y D LE L L ++ +LI
Sbjct: 624 RLHILVAEDNPVNQKLAIRLLEKNGYY---ADIAKNGLEVLEKLKKN--------HYDLI 672
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKD-IPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
+ D MP M G +KI+E + K IP++ +++ + I+ CL + + KP++
Sbjct: 673 LMDVQMPEMDGLQATQKIRELENGKSHIPIIALTAHAMKKDIDMCLNAAMDGYVSKPIRK 732
Query: 127 ADVNK 131
++ K
Sbjct: 733 EELFK 737
>gi|421075666|ref|ZP_15536673.1| response regulator receiver [Pelosinus fermentans JBW45]
gi|392526225|gb|EIW49344.1| response regulator receiver [Pelosinus fermentans JBW45]
Length = 124
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 9/123 (7%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+L+VDDS I RK+I ++ Y++ G +AL L +ED + LI+
Sbjct: 1 MKILSVDDSAIIRKIIRSGVEVLDYELVEAADGIEALTILERASED---------IILIL 51
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
D+ MPGM G L KIK +ASL IPV+++++E+ I R ++ GA + +KP + +
Sbjct: 52 LDWNMPGMDGLVFLEKIKNTASLNHIPVMMVTTESEKENIIRAIQAGAINYLVKPFTIEE 111
Query: 129 VNK 131
+ K
Sbjct: 112 LMK 114
>gi|226503033|ref|NP_001152300.1| two-component response regulator ARR11 [Zea mays]
gi|195654849|gb|ACG46892.1| two-component response regulator ARR11 [Zea mays]
Length = 584
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 22/179 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD K++E++L+ SY+VT + A++ L E+ N + +++I+D
Sbjct: 15 VLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQIL-----RERRN----KFDIVISD 65
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL I D+PV++MS + SR+ + ++ GA ++ LKPV++ ++
Sbjct: 66 VNMPDMDGFKLLELIGLEM---DLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELR 122
Query: 131 KLKPHLMKGISKEIKE------PNNINNKRKGLEEIDSADRTRTRLNDTI----DINND 179
+ H+ + E+KE +++ R G+E D D +DT+ D+N D
Sbjct: 123 NIWQHVYRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERDLFMRADSDTMRKRKDVNKD 181
>gi|315644507|ref|ZP_07897639.1| signal transduction histidine kinase, LytS [Paenibacillus vortex
V453]
gi|315280014|gb|EFU43311.1| signal transduction histidine kinase, LytS [Paenibacillus vortex
V453]
Length = 1031
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 72/123 (58%), Gaps = 13/123 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD ++ +++ LL +Y + +G +ALE + + Q I +L+ITD
Sbjct: 699 VLLVDDDPVNLQVLRSLLFAENYNLLTASNGVQALEHI--------RSGQGI--DLVITD 748
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+ MPGM+G L R ++E +L ++P++++++ ++P + L+ GA +F KPV D +
Sbjct: 749 WMMPGMSGLQLCRTVREQHTLFELPILMLTARSLPEDVRTGLQAGANDFLRKPV---DAD 805
Query: 131 KLK 133
+L+
Sbjct: 806 ELR 808
>gi|424037285|ref|ZP_17776107.1| his Kinase A domain protein [Vibrio cholerae HENC-02]
gi|408895710|gb|EKM32019.1| his Kinase A domain protein [Vibrio cholerae HENC-02]
Length = 884
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD I+R L +R + SG +A+E L E Q+++ + +L+ITD
Sbjct: 653 VLVVDDDAINRLLFKRQFEKLGVNCQLAASGIEAIEVL----EQAQSDNTITSFSLVITD 708
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY L + +K + IPVV ++EN + I + G E KP L D+
Sbjct: 709 CHMPDMDGYQLTKALKADSKFASIPVVACTAENSRNVIEKAEHNGMETVLFKPYNLGDLQ 768
Query: 131 KL-KPHLMKGISKEIKE 146
L + +L + + E +E
Sbjct: 769 ALCEQYLSRAFNSERQE 785
>gi|414879149|tpg|DAA56280.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 584
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 22/179 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD K++E++L+ SY+VT + A++ L E+ N + +++I+D
Sbjct: 15 VLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQIL-----RERRN----KFDIVISD 65
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL I D+PV++MS + SR+ + ++ GA ++ LKPV++ ++
Sbjct: 66 VNMPDMDGFKLLELIGLEM---DLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELR 122
Query: 131 KLKPHLMKGISKEIKE------PNNINNKRKGLEEIDSADRTRTRLNDTI----DINND 179
+ H+ + E+KE +++ R G+E D D +DT+ D+N D
Sbjct: 123 NIWQHVYRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERDLFMRADSDTMRKRKDVNKD 181
>gi|226875193|gb|ACO88944.1| cytokinin A-type response regulator 4 [Vitis vinifera]
Length = 42
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 84 KIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
KIKES+SLK +P SSENIPSRINRCLEEGAE+FFLKPV
Sbjct: 1 KIKESSSLKTLPSCDQSSENIPSRINRCLEEGAEDFFLKPV 41
>gi|357159597|ref|XP_003578497.1| PREDICTED: two-component response regulator-like PRR95-like
[Brachypodium distachyon]
Length = 626
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 15 DDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCMP 74
DDS R +I LL+ Y V A G KA E L + ++L++T+ +P
Sbjct: 47 DDST--RHVISALLRKCGYHVAAASDGVKAWEIL---------KEKSFNIDLVLTEVELP 95
Query: 75 GMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKP 134
M+G+ LL I E + K+IPV++MSS + S + +C+ +GA +F +KP++ ++ L
Sbjct: 96 AMSGFLLLSTIMEHEACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQ 155
Query: 135 HLMK 138
H+ +
Sbjct: 156 HVWR 159
>gi|333997599|ref|YP_004530211.1| MmoS protein [Treponema primitia ZAS-2]
gi|333740313|gb|AEF85803.1| MmoS [Treponema primitia ZAS-2]
Length = 808
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+D+ I+ +++ LL +VT +G +AL+ L ++ SQ+ +L++ D
Sbjct: 683 VLLVEDNEINAMIVQELLSAVGMEVTTAQNGQEALDILS-----DKAKSQLPPFDLVLMD 737
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MP M GY+ R IKE+ KD+PV +++ P RC+ G E+ KP+
Sbjct: 738 LQMPVMDGYEATRIIKETPEYKDMPVYALTAHAFPEEKERCIALGMEDHLTKPI 791
>gi|303247352|ref|ZP_07333625.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
gi|302491266|gb|EFL51155.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
Length = 122
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS R L+ +++ ++VTA + G LE L T+ QV +LIIT
Sbjct: 4 HILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKL-------YTDPQV---DLIIT 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G ++ ++E + +DIP+V++S+E I+ L GA + +KP Q
Sbjct: 54 DINMPRMDGITFIKTVREQDAYRDIPIVVLSTEGEERDIHAGLSIGANLYMVKPAQ 109
>gi|108707544|gb|ABF95339.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 533
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V++ R+++ LL+ Y+V ++G A + L ED Q + ++L++
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQNH-----IDLVL 131
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G LL KI KDIPV++MSS + + +CL +GA +F +KP++ +
Sbjct: 132 TEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNE 191
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 192 LKNLWQHVWR 201
>gi|108707545|gb|ABF95340.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 473
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V++ R+++ LL+ Y+V ++G A + L ED Q + ++L++
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQNH-----IDLVL 131
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G LL KI KDIPV++MSS + + +CL +GA +F +KP++ +
Sbjct: 132 TEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNE 191
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 192 LKNLWQHVWR 201
>gi|134095906|ref|YP_001100981.1| composite two component regulatory (sensor histidine kinase and
response regulator hybrid) transcription regulator
protein [Herminiimonas arsenicoxydans]
gi|133739809|emb|CAL62860.1| Putative chemotaxis protein histidine kinase [Herminiimonas
arsenicoxydans]
Length = 1969
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+Q V+ VDDS+ R++ +RLL YQV G AL+ L Q + ++
Sbjct: 1843 TQHIVMVVDDSLTVRRVTQRLLTREGYQVVLAKDGVDALQHL-----------QSVTPDV 1891
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
++ D MP M G+DL R I++ +DIP+++++S N +E G E+ KP Q
Sbjct: 1892 MLVDIEMPRMDGFDLTRNIRDDERTRDIPIIMITSRTASKHRNYAMELGVNEYLGKPYQE 1951
Query: 127 ADVNKLKPHLMK 138
+ KL +K
Sbjct: 1952 EALVKLIAGFIK 1963
>gi|163801654|ref|ZP_02195552.1| Signal transduction histidine kinase [Vibrio sp. AND4]
gi|159174571|gb|EDP59373.1| Signal transduction histidine kinase [Vibrio sp. AND4]
Length = 1240
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 7/176 (3%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD I+R L +R + +G +A+E L +E+ + N+ +L+ITD
Sbjct: 1009 VLVVDDDPINRLLFKRQFEKMGITCQLAATGIEAIEALTQ-SENNKANAPF---SLVITD 1064
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY L +++KE+ + IPVV ++EN + I + G E KP L+D+
Sbjct: 1065 CHMPDMDGYQLTQRLKENPNFASIPVVACTAENSRNVIEKAAHHGIETVLFKPYNLSDLQ 1124
Query: 131 KL-KPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTIDINNDGLPDLE 185
L + +L++ + + +E N + G E+++ A L++ I + ++G +L+
Sbjct: 1125 ALCEQYLLREFNTDFEE--NWHQAYNGEEKVEMAQVICEALSNDIALIHNGEENLK 1178
>gi|39937247|ref|NP_949523.1| Fis family transcriptional regulator [Rhodopseudomonas palustris
CGA009]
gi|39651105|emb|CAE29628.1| two component sigma-54-dependent transcriptional regulator, Fis
family [Rhodopseudomonas palustris CGA009]
Length = 495
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 21/152 (13%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L DD + R+L+E +++ Y+ +VDSG+ A+E L T ++ ++
Sbjct: 4 RILIADDDAVQRRLVENMVQKCGYEAVSVDSGDAAVEAL--------TAPDAPAIDAVVL 55
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV----- 124
D MPG+ G +L KI+ AS D+PV++ ++ + + GA +F +KPV
Sbjct: 56 DLVMPGLDGLGVLSKIR--ASGLDVPVIVQTAHGGIDNVVSAMRAGAHDFVVKPVGIERL 113
Query: 125 QLADVNKLKPHLMKGISKEIKEPNNINNKRKG 156
Q++ N L MKG E I + R+G
Sbjct: 114 QVSLRNALNASAMKG------ELQRIRHAREG 139
>gi|66809777|ref|XP_638612.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
gi|3183160|sp|Q23917.1|PDE2_DICDI RecName: Full=3',5'-cyclic-nucleotide phosphodiesterase regA;
Short=PDEase regA; AltName: Full=Phosphodiesterase 2;
Short=DdPDE2; AltName: Full=Response regulator protein
A; AltName: Full=cAMP-specific 3',5'-cAMP
phosphodiesterase 2
gi|1405368|gb|AAB03508.1| RegA [Dictyostelium discoideum]
gi|3046777|emb|CAA06513.1| RegA [Dictyostelium discoideum]
gi|60467179|gb|EAL65213.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
Length = 793
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 10/119 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S+ +L DD + RK++ LLK Y VT V +G A E++ N+ +Q + +L
Sbjct: 158 SKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYI---NKGQQ------KYDL 208
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI-NRCLEEGAEEFFLKPV 124
++TD MP +TG+DLL++I + + IPV++MS + + N ++ G ++F KP+
Sbjct: 209 VLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPI 267
>gi|395759127|dbj|BAM31260.1| pseudo-response regulator [Triticum aestivum]
Length = 469
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 73/129 (56%), Gaps = 12/129 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 36 LVETDDST--RQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 84
Query: 71 YCMPG-MTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G ++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 85 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 144
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 145 KNLWAHVWR 153
>gi|413956105|gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 743
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V++ R+++ LL+ Y+V ++G A +L ED Q N ++L++
Sbjct: 83 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYL----EDLQNN-----IDLVL 133
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G LL KI KDIPV++MS+ + S + +CL +GA +F +KP++ +
Sbjct: 134 TEVFMPCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNE 193
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 194 LKNLWQHVWR 203
>gi|422648645|ref|ZP_16711765.1| sensory box protein/response regulator [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330962179|gb|EGH62439.1| sensory box protein/response regulator [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 705
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T S +L VDD + R L+E LL+ +Y+ +SG ALE + L D
Sbjct: 1 MTQSAATILIVDDDVHVRDLLEVLLQNQNYRTLTAESGEVALEMVELHAPD--------- 51
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
LI+ D MPGM GY++ ++K + S +IP++++S+ + S LE GAEE+ KP
Sbjct: 52 --LILLDIMMPGMDGYEVASQLKANKSTANIPIIMLSALDQQSARLSGLEAGAEEYLNKP 109
Query: 124 V 124
V
Sbjct: 110 V 110
>gi|443318409|ref|ZP_21047662.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
gi|442781999|gb|ELR92086.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
Length = 1182
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 11/130 (8%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
QF +L VDD ++R++I L SY+VT +G +AL L S + +LI
Sbjct: 784 QFLILVVDDEPVNRQVIVNHLSVHSYRVTQASNGPEALAML----------SNGLLPDLI 833
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+ D MP MTGY++ R+++E +P+V+++++N + + L GA ++ KPV
Sbjct: 834 LLDVMMPRMTGYEVCRQVREQHPAYALPIVMLTAKNQVADLVEGLSAGANDYLTKPVSKG 893
Query: 128 D-VNKLKPHL 136
+ + +L HL
Sbjct: 894 ELLARLNTHL 903
>gi|156743120|ref|YP_001433249.1| GAF and PAS/PAC sensor-containing adenylate/guanylate cyclase
[Roseiflexus castenholzii DSM 13941]
gi|156234448|gb|ABU59231.1| adenylate/guanylate cyclase with GAF and PAS/PAC sensors
[Roseiflexus castenholzii DSM 13941]
Length = 971
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 66/120 (55%), Gaps = 11/120 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+LAVDD R++++ LL + Y+V+ +G +AL +L L+ D L++
Sbjct: 6 HILAVDDDASVRRMLQILLTNAGYRVSVASTGEEALAYLELVTPD-----------LVLM 54
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D +PG++G ++ ++K IPV++++ P L+ GA++F +KPV L ++
Sbjct: 55 DVSLPGLSGQHVMERVKSDPDRPFIPVILITGYGDPEAKVAALDAGADDFLVKPVDLTEL 114
>gi|384252785|gb|EIE26260.1| hypothetical protein COCSUDRAFT_64410 [Coccomyxa subellipsoidea
C-169]
Length = 428
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVL +D + +++E+LLK +Y+VT +G +AL+ L Q N + +LI+T
Sbjct: 14 HVLLAEDDDLTLRIVEQLLKQCNYRVTVARNGQEALDIL-------QHNDKHC-FDLILT 65
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP + G DL+ ++ + +PV++MSSE I + GA ++ +KP++ +V
Sbjct: 66 DIMMPKVDGMDLVCEVNQRKVWSHLPVIVMSSEQSQEAICKAFTVGAADYLIKPIRKNEV 125
Query: 130 NKLKPHLMKGI 140
L H+ + +
Sbjct: 126 ATLWHHIWRKV 136
>gi|192293028|ref|YP_001993633.1| Fis family transcriptional regulator [Rhodopseudomonas palustris
TIE-1]
gi|192286777|gb|ACF03158.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris TIE-1]
Length = 495
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 21/152 (13%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L DD + R+L+E +++ Y+ +VDSG+ A+E L T ++ ++
Sbjct: 4 RILIADDDAVQRRLVENMVQKCGYEAVSVDSGDAAVEAL--------TAPDAPAIDAVVL 55
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV----- 124
D MPG+ G +L KI+ AS D+PV++ ++ + + GA +F +KPV
Sbjct: 56 DLVMPGLDGLGVLSKIR--ASGLDVPVIVQTAHGGIDNVVSAMRAGAHDFVVKPVGIERL 113
Query: 125 QLADVNKLKPHLMKGISKEIKEPNNINNKRKG 156
Q++ N L MKG E I + R+G
Sbjct: 114 QVSLRNALNASAMKG------ELQRIRHAREG 139
>gi|116252628|ref|YP_768466.1| two component response regulator transcriptional regulatory protein
[Rhizobium leguminosarum bv. viciae 3841]
gi|115257276|emb|CAK08371.1| putative two component response regulator transcriptional
regulatory protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 262
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ +SG KALE L N D
Sbjct: 122 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEILKA-NRD-------- 172
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ + ++ ++ +SS + R L+ G +F L+
Sbjct: 173 -IGLVITDYNMPDIDGFELTRRIRANIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 231
Query: 123 P 123
P
Sbjct: 232 P 232
>gi|443315090|ref|ZP_21044601.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
gi|442785303|gb|ELR95132.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
Length = 122
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+DSI R++I LL+ S VTA G +ALE + Q+ +L++ D
Sbjct: 4 VLVVEDSIPQREMITELLRGSGLDVTAASDGVEALEHI-------QSGHPP---DLVVLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY+L R++K S +D+PVV+ SS+ +++GA+ + KP Q ++
Sbjct: 54 IVMPRMNGYELCRRLKADPSTQDVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPTELV 113
Query: 131 KLKPHLMKG 139
L++G
Sbjct: 114 GTVKQLLRG 122
>gi|334341286|ref|YP_004546266.1| ATP-binding protein [Desulfotomaculum ruminis DSM 2154]
gi|334092640|gb|AEG60980.1| ATP-binding region ATPase domain protein [Desulfotomaculum ruminis
DSM 2154]
Length = 1033
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++A DD R L+E L + Y + AVD+G L+ L Q V+LII D
Sbjct: 696 IIADDDHTSLRVLMEAL-EPEGYFLIAVDNGQAVLDLL----------EQRADVDLIILD 744
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG++GY++ RKI+ S S+ ++PV+++++ +P + + GA +F KP L ++
Sbjct: 745 IMMPGLSGYEVCRKIRASYSIAELPVLMLTAAILPEDMVAAFQSGANDFLHKPFDLTELK 804
Query: 131 KLKPHLM 137
L+
Sbjct: 805 SRMSSLL 811
>gi|116696176|ref|YP_841752.1| chemotaxis signal transduction protein [Ralstonia eutropha H16]
gi|113530675|emb|CAJ97022.1| chemotaxis specific response regulator containing a CheW-domain
[Ralstonia eutropha H16]
Length = 322
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ--VNLII 68
V+A DDS + R LIE+ LK V SG +A E L + + ++ + +Q V L++
Sbjct: 193 VIAADDSALARGLIEQGLKALGAPVVMTKSGKEAWELLDRIAAEAASHGRSVQDEVALVL 252
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV--QL 126
TD MP M G+ L RKIK + LK +PVVI SS + + + GA+ + K V +L
Sbjct: 253 TDLEMPEMDGFTLTRKIKADSRLKSLPVVIHSSLSGEASEEHVRKVGADAYVAKFVAKEL 312
Query: 127 AD 128
AD
Sbjct: 313 AD 314
>gi|357126386|ref|XP_003564868.1| PREDICTED: uncharacterized protein LOC100824670 [Brachypodium
distachyon]
Length = 577
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 24/177 (13%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD K++E++L+ SY+VT ALE L + + +++I+D
Sbjct: 14 VLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALEIL---------RERKSKFDIVISD 64
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL I D+PV++MS + SR+ + ++ GA ++ LKPV++ ++
Sbjct: 65 VNMPDMDGFKLLEHIGLEM---DLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELR 121
Query: 131 KLKPHLMKGISKEIKE------PNNINNKRKGLEEID------SADRTRTRLNDTID 175
+ H+ + E+KE +++ R G E D +AD TR +D
Sbjct: 122 NIWQHVYRKRMHEVKEIEGHDSCDDLQILRYGFEGFDEKGIFITADSDTTRKRKDLD 178
>gi|18424319|ref|NP_568919.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|334188506|ref|NP_001190574.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|52783244|sp|Q9LVG4.1|APRR3_ARATH RecName: Full=Two-component response regulator-like APRR3; AltName:
Full=Pseudo-response regulator 3
gi|8777349|dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
gi|10281008|dbj|BAB13744.1| pseudo-response regulator 3 [Arabidopsis thaliana]
gi|225879138|dbj|BAH30639.1| hypothetical protein [Arabidopsis thaliana]
gi|332009893|gb|AED97276.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009894|gb|AED97277.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 495
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LLK SY+VTAV LE +L EDE++ ++L++T+
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEVTAVPD---VLEAWRIL-EDEKSC-----IDLVLTE 116
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP +G LL KI +LK+IPV++MSS + + +CL GA +F +KP++ ++
Sbjct: 117 VDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELK 176
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 177 NLWQHVWR 184
>gi|373487927|ref|ZP_09578593.1| response regulator receiver [Holophaga foetida DSM 6591]
gi|372007701|gb|EHP08330.1| response regulator receiver [Holophaga foetida DSM 6591]
Length = 138
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 12/117 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+DS L LK +V +G +ALE LG E ++L++TD
Sbjct: 15 ILVVEDSAPTAHLFSARLKMEGIEVLTARNGLEALEILG--QEP---------ISLVVTD 63
Query: 71 YCMPGMTGYDLLRKIKESAS-LKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
MPGM GY L+ +I++ A L IP++++SS S RC E GA+E+ KPV L
Sbjct: 64 LMMPGMDGYRLVHEIRQLAPPLASIPIIVVSSNQRESEQVRCFEAGADEYMTKPVSL 120
>gi|226505594|ref|NP_001146641.1| uncharacterized protein LOC100280240 [Zea mays]
gi|219888151|gb|ACL54450.1| unknown [Zea mays]
gi|323388721|gb|ADX60165.1| PseuodARR-B transcription factor [Zea mays]
gi|413956104|gb|AFW88753.1| two-component response regulator-like PRR73 [Zea mays]
Length = 766
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V++ R+++ LL+ Y+V ++G A +L ED Q N ++L++
Sbjct: 83 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYL----EDLQNN-----IDLVL 133
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G LL KI KDIPV++MS+ + S + +CL +GA +F +KP++ +
Sbjct: 134 TEVFMPCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNE 193
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 194 LKNLWQHVWR 203
>gi|303271521|ref|XP_003055122.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
gi|226463096|gb|EEH60374.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
Length = 1334
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 19/176 (10%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S HVL VDD+ LL+ YQVT SG +A+ L + Q NL
Sbjct: 8 STVHVLLVDDA--------GLLRRCQYQVTTASSGREAMALL----------ERGTQFNL 49
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
++TD MP + G LL ++ + ++PVV+MSS + C+ GAE++ +KPV
Sbjct: 50 LLTDVMMPDVDGPTLLHFVRNNPLYAEMPVVMMSSNEHADMVMNCIRLGAEDYIIKPVTN 109
Query: 127 ADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTIDINNDGLP 182
V + H+ + + P N R+ EE + L +D+ LP
Sbjct: 110 KAVKHMWAHVWRRKQRYQMVP-RFENGREVDEEREFEAAAMEELRGGVDLEAGMLP 164
>gi|77361535|ref|YP_341110.1| two-component response regulator [Pseudoalteromonas haloplanktis
TAC125]
gi|76876446|emb|CAI87668.1| putative two-component response regulator [Pseudoalteromonas
haloplanktis TAC125]
Length = 299
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 68/113 (60%), Gaps = 12/113 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD ++R ++E+ L + ++V V SG++AL F+ + QV+LII D
Sbjct: 7 VLIVDDDALNRIVLEKTL-SDEHEVFLVKSGDEALTFI-----------KTTQVDLIILD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MPGM GY++L K+KE ++ + IPV+ +S+ + ++ LE GA ++ KP
Sbjct: 55 IVMPGMNGYEVLVKLKEDSATQMIPVIFISANSSHDDESKGLELGAMDYITKP 107
>gi|218514030|ref|ZP_03510870.1| two-component response regulator protein [Rhizobium etli 8C-3]
Length = 167
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ +SG KALE L N D
Sbjct: 27 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEILKA-NRD-------- 77
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ + ++ ++ +SS + R L+ G +F L+
Sbjct: 78 -IGLMITDYNMPDIDGFELTRRIRANIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 136
Query: 123 P 123
P
Sbjct: 137 P 137
>gi|119898694|ref|YP_933907.1| two-component response regulator [Azoarcus sp. BH72]
gi|119671107|emb|CAL95020.1| probable two-component response regulator [Azoarcus sp. BH72]
Length = 301
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 20/158 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD I+RKL+ LL+ + V SG +ALE + Q +S V +LI+ D
Sbjct: 8 ILVVDDERINRKLLSELLE-EHHDVVIAKSGEQALERV-------QADSAV---DLILLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPGM+G+D+LR++K S + KD+PV+ ++S N L+ GA ++ KP V
Sbjct: 57 VVMPGMSGHDVLRRLKASDATKDVPVIFITSLNSVDDEEIGLDLGAADYITKPFHPGIVR 116
Query: 131 -KLKPHLMKGISKEIKEP-------NNINNKRKGLEEI 160
+++ HL ++I E I+N+R+ EE+
Sbjct: 117 LRVENHLRFVRQRKILETLAGRDCLTEIDNRRR-FEEV 153
>gi|389877081|ref|YP_006370646.1| CheA signal transduction histidine kinase [Tistrella mobilis
KA081020-065]
gi|388527865|gb|AFK53062.1| CheA Signal transduction histidine Kinases (STHK) [Tistrella
mobilis KA081020-065]
Length = 913
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS R LI +L+ S Y+V+ V+S AL+ Q + ++I++D
Sbjct: 790 VLLVDDSAFFRSLIAPVLRVSGYEVSGVESAEAALKL----------RDQGAEFDIIVSD 839
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
MPGM G+ R I+E + +P++ +SS P +R + G +++ K
Sbjct: 840 IEMPGMDGFAFARTIREEGAWSQVPMIALSSHTAPEDFDRGRDSGYDDYVAK 891
>gi|108707546|gb|ABF95341.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 745
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R+++ LL+ Y+V ++G A + L ED Q ++L++T+
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQN-----HIDLVLTE 133
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI KDIPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 134 VVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELK 193
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 194 NLWQHVWR 201
>gi|356530639|ref|XP_003533888.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 676
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 22/167 (13%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD I K++E LL+ Y VT N+A+E L +L E+ + +L+I+D
Sbjct: 21 VLAVDDDPICLKVLENLLRKCQYHVTTT---NQAVEALTMLRENRN------KFDLVISD 71
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP + G+ LL + D+PV+++S+ + + + GA ++ LKPV++ ++
Sbjct: 72 VNMPDIDGFKLLELVGLEM---DLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELK 128
Query: 131 KLKPHLMK----------GISKEIKEPNNINNKRKGLEEIDSADRTR 167
+ H+++ S E K PN +GL +SAD+ +
Sbjct: 129 NIWQHVVRRKNFDSRDQNKASNEEKAPNFAGGGSQGLRSENSADQNK 175
>gi|67005935|gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LLK SY+VTAV LE +L EDE++ ++L++T+
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEVTAVPD---VLEAWRIL-EDEKSC-----IDLVLTE 116
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP +G LL KI +LK+IPV++MSS + + +CL GA +F +KP++ ++
Sbjct: 117 VDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELK 176
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 177 NLWQHVWR 184
>gi|359781383|ref|ZP_09284607.1| two-component response regulator CheY [Pseudomonas psychrotolerans
L19]
gi|359370447|gb|EHK71014.1| two-component response regulator CheY [Pseudomonas psychrotolerans
L19]
Length = 128
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTA-VDSGNKALEFLGLLNEDEQTNSQVIQV 64
D +L VDD R++I+ LL+ + TA D GN AL L N D
Sbjct: 2 DKNMKILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGNTALPMLQSGNFD---------- 51
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
++TD+ MPGMTG DLLR+++ A LK +PV+++++E +I + G + +KP
Sbjct: 52 -FLVTDWNMPGMTGIDLLRQVRADARLKTLPVLMVTAEAKREQIIEAAQAGVNGYVVKP 109
>gi|255636387|gb|ACU18532.1| unknown [Glycine max]
Length = 220
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 24/168 (14%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD I K++E LL+ Y VT N+A+E L +L E+ + +L+I+D
Sbjct: 21 VLAVDDDPICLKVLENLLRKCQYHVTTT---NQAVEALTMLRENRN------KFDLVISD 71
Query: 71 YCMPGMTGYDLLRKIKESASLK-DIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MP + G+ LL E L+ D+PV+++S+ + + + GA ++ LKPV++ ++
Sbjct: 72 VNMPDIDGFKLL----ELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEEL 127
Query: 130 NKLKPHLMK----------GISKEIKEPNNINNKRKGLEEIDSADRTR 167
+ H+++ S E K PN +GL +SAD+ +
Sbjct: 128 KNIWQHVVRRKNFDSRDQNKASNEEKAPNFAGGGSQGLRSENSADQNK 175
>gi|170694368|ref|ZP_02885522.1| response regulator receiver protein [Burkholderia graminis C4D1M]
gi|170140791|gb|EDT08965.1| response regulator receiver protein [Burkholderia graminis C4D1M]
Length = 125
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+LA+DDS R+++ L + Y+VT G + LE N+ ++ +L++T
Sbjct: 4 HILAIDDSASMRQILSATLTAAGYEVTLAADGAEGLE-----------NALAVRFDLVLT 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MPG TG DL+ +++ + + D P++++++E+ E GA + KP
Sbjct: 53 DQHMPGKTGLDLIAELRGNPAYADTPILVLTTESGEPFKAAAREAGATGWIEKP------ 106
Query: 130 NKLKPHLMKGISKEIKEPNN 149
L P L+ + + EP++
Sbjct: 107 --LDPELLTELVAALAEPDH 124
>gi|24796813|gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
Length = 789
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V++ R+++ LL+ Y+V ++G A + L ED Q + ++L++
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQNH-----IDLVL 131
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G LL KI KDIPV++MSS + + +CL +GA +F +KP++ +
Sbjct: 132 TEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNE 191
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 192 LKNLWQHVWR 201
>gi|373459351|ref|ZP_09551118.1| response regulator receiver protein [Caldithrix abyssi DSM 13497]
gi|371721015|gb|EHO42786.1| response regulator receiver protein [Caldithrix abyssi DSM 13497]
Length = 388
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 17/171 (9%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+F +LAVDD+ I+ KL+ L S Y++ SG +ALE NS + +LI
Sbjct: 4 KFKILAVDDNPINLKLLSSALINSDYEIYTASSGQQALEL---------ANS--VLPDLI 52
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+ D MP M GY++ +K++E+ + + IPV+ +S+ N + L GA ++ KP
Sbjct: 53 LLDVMMPDMDGYEVCKKLQENKNTQYIPVIFLSARNEAVDKAKGLALGAVDYLTKPFNPL 112
Query: 128 DVN-KLKPHLM--KGISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTID 175
++N +++ HL + + + ++E + N+ LE+I + + TID
Sbjct: 113 EINARVRTHLTSRRAVIRLMRENQKLQNE---LEKIKAEGTNSEKEKKTID 160
>gi|302143985|emb|CBI23090.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL+ SY+V AV G KA E L ++ ++LI+
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVL---------KARPHNIDLIL 90
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++G+ LL + E K+IPV++MSS + + +C+ GA +F +KPV+ +
Sbjct: 91 TEVELPSISGFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNE 150
Query: 129 VNKLKPHLMKGISKEI 144
+ L H+ + S +
Sbjct: 151 LKNLWQHVWRRQSSTV 166
>gi|258678906|dbj|BAI39993.1| pseudo-response regulator homolog protein [Physcomitrella patens
subsp. patens]
Length = 907
Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+L V+ R ++ LL+ Y+VTAV +G+ A GLL ED +N +L++
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAW---GLL-EDANSN-----FDLVL 233
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TD MP ++G LL K+ + + + +P+VIMSS + + RCL +GA ++ +KPV+ +
Sbjct: 234 TDVVMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNE 293
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 294 LRNLWQHVWR 303
>gi|220030924|gb|ACL78627.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030974|gb|ACL78652.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLSRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|338737964|ref|YP_004674926.1| response regulator (CheY-like); diguanylate cyclase (GGDEF) and
response regulator receiver domains [Hyphomicrobium sp.
MC1]
gi|337758527|emb|CCB64352.1| response regulator (CheY-like); diguanylate cyclase (GGDEF) and
response regulator receiver domains [Hyphomicrobium sp.
MC1]
Length = 456
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 11/114 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD + + KL+E L+ ++V +SG +AL+ L E E V++++ D
Sbjct: 5 VLVVDDILANVKLLEARLQAEYFEVLTANSGQQALDIL----EHES-------VDVVLLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MPGM G++ R+IK S IPVV++++ + PS LE GA++F KPV
Sbjct: 54 VMMPGMDGFETCRRIKGSHLTHHIPVVMVTALDQPSDKVLGLESGADDFLTKPV 107
>gi|220903479|ref|YP_002478791.1| response regulator receiver modulated CheW protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219867778|gb|ACL48113.1| response regulator receiver modulated CheW protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 346
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI--QVN 65
QFH+L DDS R +I+ L+ S ++VTAV SG +A E+L + Q + + V+
Sbjct: 210 QFHLLVADDSNSLRHIIKSSLQKSGFRVTAVASGREAWEYLQTARNEAQAQGKELTDMVH 269
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
L+I+D MP M G+ L +I+++ L +PV++ SS + + ++ GA++ KP
Sbjct: 270 LVISDIEMPEMDGHMLTAQIRDTPGLSTLPVILFSSLITDALYAKGVKVGADKQVSKP 327
>gi|18420797|ref|NP_568446.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
gi|10281006|dbj|BAB13743.1| pseudo-response regulator 5 [Arabidopsis thaliana]
gi|332005931|gb|AED93314.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
Length = 667
Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL+ SY+V AV G KA E L E V+LI+
Sbjct: 159 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPE---------SVDLIL 209
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++GY LL I E K+IPV++MS+++ + + +C+ +GA ++ +KP++ +
Sbjct: 210 TEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNE 269
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 270 LRNLWQHVWR 279
>gi|147775384|emb|CAN78184.1| hypothetical protein VITISV_031283 [Vitis vinifera]
Length = 609
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
H++ VDD +I ++ +LKT Y+V V+S AL L +T S LI+
Sbjct: 21 LHIMVVDDDVICLSIVAGILKTWKYEVVTVNSAQDALTTL-------RTRSNFFH--LIV 71
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TD MP M G++ R + E L PVV+MS+++ S + R LE GA + +KPV D
Sbjct: 72 TDVHMPEMDGFEFQRLVHEEFHL---PVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDD 128
Query: 129 VNKL 132
+ L
Sbjct: 129 LKNL 132
>gi|405378877|ref|ZP_11032787.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. CF142]
gi|397324611|gb|EJJ28966.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. CF142]
Length = 276
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ +SG KALE L N D
Sbjct: 136 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSTAESGAKALEILKA-NRD-------- 186
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L++TDY MP + G++L R+I+ S ++ ++ +SS + R L+ G +F L+
Sbjct: 187 -IGLMVTDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 245
Query: 123 PV 124
P
Sbjct: 246 PF 247
>gi|406835512|ref|ZP_11095106.1| PAS domain S-box [Schlesneria paludicola DSM 18645]
Length = 925
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 78/141 (55%), Gaps = 11/141 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
L VDD+ +R++++ +LK Q T VDSG++AL ++ TNS LI+ D
Sbjct: 517 ALVVDDNATNRRILQEMLKKWGMQPTLVDSGSQALS---AISHAADTNSMF---QLILVD 570
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPGM G+ L +IK++ + V++++S+N RC + G + +KP+ AD+
Sbjct: 571 SEMPGMNGFALSEQIKQARACSKAIVMMLTSDNQRGDAARCRDLGIKSHLVKPIMAADL- 629
Query: 131 KLKPHLMKGISKEIKEPNNIN 151
L+ L I+ E+ EP +++
Sbjct: 630 -LRSIL---IAMELAEPPSVD 646
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 77/169 (45%), Gaps = 30/169 (17%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+L DD++I++K+ R+L+ + V + G + L+ L + + D +I+
Sbjct: 666 LQILLADDNLINQKVAVRMLERQGHTVVVANDGTEVLQILAMQSFD-----------VIL 714
Query: 69 TDYCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
D MP M G++ +I+ E + +P++ M++ + RCL G ++ KP++
Sbjct: 715 MDVQMPVMGGFEATARIRAIEEETGAHLPIIAMTAHAMKGDRERCLGAGMNDYLSKPIKA 774
Query: 127 ADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTID 175
++ + + + + P +I ++A RT T +T D
Sbjct: 775 SE--------LAAVLQSVAVPASIP---------ETATRTMTPATETFD 806
>gi|158513189|sp|A2XFB7.2|PRR73_ORYSI RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
Length = 767
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V++ R+++ LL+ Y+V ++G A + L ED Q + ++L++
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQNH-----IDLVL 131
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G LL KI KDIPV++MSS + + +CL +GA +F +KP++ +
Sbjct: 132 TEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNE 191
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 192 LKNLWQHVWR 201
>gi|51571885|dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa Indica Group]
Length = 767
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V++ R+++ LL+ Y+V ++G A + L ED Q + ++L++
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQNH-----IDLVL 131
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G LL KI KDIPV++MSS + + +CL +GA +F +KP++ +
Sbjct: 132 TEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNE 191
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 192 LKNLWQHVWR 201
>gi|301118478|ref|XP_002906967.1| protein kinase, putative [Phytophthora infestans T30-4]
gi|262108316|gb|EEY66368.1| protein kinase, putative [Phytophthora infestans T30-4]
Length = 897
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 79/144 (54%), Gaps = 12/144 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S+ VL V+D R +LK+ Y V AV++G +AL+ L TN + +L
Sbjct: 4 SEVTVLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDLL-------VTNHA--KFDL 54
Query: 67 IITDYCMPGMTGYDLLRKI-KESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
++ D +P MTG +LL +I K SA+L IP+V+ SS + CL +GA+++ +KP+Q
Sbjct: 55 VLCDVMLPVMTGIELLDEIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQ 114
Query: 126 LADVNKLKPHLMKGISKEIKEPNN 149
+ L H+ +S+ ++ +N
Sbjct: 115 VNTAKTLVRHVW--LSRRLERTSN 136
>gi|325910792|dbj|BAJ83826.1| circadian response regulator 1a [Physcomitrella patens subsp.
patens]
Length = 907
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+L V+ R ++ LL+ Y+VTAV +G+ A GLL ED +N +L++
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAW---GLL-EDANSN-----FDLVL 233
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TD MP ++G LL K+ + + + +P+VIMSS + + RCL +GA ++ +KPV+ +
Sbjct: 234 TDVVMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNE 293
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 294 LRNLWQHVWR 303
>gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa]
Length = 700
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R++I LL+ SY+V AV G KA E L + ++L++T+
Sbjct: 43 LVEADDST--RQIIAALLRKCSYKVAAVSDGLKAWETL---------KGRPHNIDLVLTE 91
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++G+ LL I E K+IPV++MSS + + + +C+ +GA +F +KPV+ ++
Sbjct: 92 VELPSISGFALLTLIMEHDVCKNIPVIMMSSNDAITTVLKCMLKGAADFLIKPVRKNELR 151
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 152 NLWQHVWR 159
>gi|209528443|ref|ZP_03276873.1| adenylate/guanylate cyclase [Arthrospira maxima CS-328]
gi|423063642|ref|ZP_17052432.1| guanylate cyclase:Response regulator [Arthrospira platensis C1]
gi|209491122|gb|EDZ91547.1| adenylate/guanylate cyclase [Arthrospira maxima CS-328]
gi|406715074|gb|EKD10232.1| guanylate cyclase:Response regulator [Arthrospira platensis C1]
Length = 352
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD+ I+R L+ R L+ Y V +G +AL+ + + ++L++ D
Sbjct: 8 VLIVDDNEINRDLLARRLQKQGYDVLVASNGFEALKIM-----------RSTALDLVLLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M GY +L +K L+ IPV+++S+ N I RC+E GAE++ KP
Sbjct: 57 IMMPQMNGYQVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLSKP 109
>gi|158338166|ref|YP_001519343.1| two-component hybrid histidine kinase sensor and regulator
[Acaryochloris marina MBIC11017]
gi|158308407|gb|ABW30024.1| two-component hybrid histidine kinase sensor and regulator
[Acaryochloris marina MBIC11017]
Length = 355
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 12/124 (9%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S ++LAVDD + L++ +L+++ Y++ VDSG AL Q Q +L
Sbjct: 7 SNRYILAVDDLPDNLMLLKMMLESAGYRIELVDSGPAAL-----------AQIQKAQPDL 55
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
+I D MPGM+GY++ +KI+ L IP++++S+ S + + L+ GA++F KPV+L
Sbjct: 56 VILDVMMPGMSGYEVTQKIRNDPQLPYIPILLISAHE-RSSVVKGLDAGADDFIRKPVEL 114
Query: 127 ADVN 130
++
Sbjct: 115 EELQ 118
>gi|115452319|ref|NP_001049760.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|122247198|sp|Q10N34.1|PRR73_ORYSJ RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
gi|51571879|dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa Japonica Group]
gi|108707543|gb|ABF95338.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
gi|113548231|dbj|BAF11674.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|222624693|gb|EEE58825.1| hypothetical protein OsJ_10396 [Oryza sativa Japonica Group]
Length = 767
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V++ R+++ LL+ Y+V ++G A + L ED Q + ++L++
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQNH-----IDLVL 131
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G LL KI KDIPV++MSS + + +CL +GA +F +KP++ +
Sbjct: 132 TEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNE 191
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 192 LKNLWQHVWR 201
>gi|309791654|ref|ZP_07686146.1| cyclic nucleotide-binding protein [Oscillochloris trichoides DG-6]
gi|308226276|gb|EFO80012.1| cyclic nucleotide-binding protein [Oscillochloris trichoides DG6]
Length = 848
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 72/118 (61%), Gaps = 11/118 (9%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
D + H+L VDD+ ++R+++ R L+ YQVT V+ G AL+ L ++S +
Sbjct: 163 DLRGHLLLVDDNDMNREMLSRRLERMDYQVTQVNDGYPALDAL-------HSHS----FD 211
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
L++ D MPG+ GY +LR +++ L+ +PV+++S+ + + + + +E GA+++ KP
Sbjct: 212 LVLLDIMMPGLDGYAVLRAMRDDVDLRHVPVIVLSALDDIASVVQAIELGADDYLPKP 269
>gi|242085174|ref|XP_002443012.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
gi|241943705|gb|EES16850.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
Length = 551
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 80/143 (55%), Gaps = 14/143 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD + K++ER LK +Y T V AL+ +L E ++ N Q +L+I+D
Sbjct: 12 VLAVDDDRVCLKILERQLKYCNYNATVVSDARTALD---MLRERKEGN----QFDLVISD 64
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL I D+PV+++S+ + I + ++ GA ++ +KPV+L +
Sbjct: 65 VIMPNMDGFKLLELIGLEM---DLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLR 121
Query: 131 KLKPHLMKGISKEIKEP-NNINN 152
+ H++K + +P NNIN+
Sbjct: 122 GIWTHVVK---NSMNDPQNNINS 141
>gi|88800741|ref|ZP_01116299.1| chemotaxis protein CheY [Reinekea blandensis MED297]
gi|88776517|gb|EAR07734.1| chemotaxis protein CheY [Reinekea sp. MED297]
Length = 121
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 11/114 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H L VDDS R+++E LKT+ YQVTA G +AL+ SQ + ++T
Sbjct: 4 HFLIVDDSASIRQMVEHTLKTAGYQVTAAKDGQEALDL-----------SQRQSFDCVLT 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D MP M G L++ +++SA+ K P++++++E ++ GA + +KP
Sbjct: 53 DQNMPRMDGLTLIKSLRQSANYKRTPILVLTTEASDDMKSKGRAAGATGWMVKP 106
>gi|186681656|ref|YP_001864852.1| response regulator receiver protein [Nostoc punctiforme PCC 73102]
gi|186464108|gb|ACC79909.1| response regulator receiver protein [Nostoc punctiforme PCC 73102]
Length = 157
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 77/130 (59%), Gaps = 9/130 (6%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQ--VTAVDSGNKALEFLGLLNEDEQT------NSQV- 61
+L V+DS D ++++RL++ S Q + +G++ LEFL D + NS+V
Sbjct: 9 LLVVEDSNEDFRMLQRLMRLMSVQNPIHRCTNGDEVLEFLYQQGSDAHSKGENLPNSKVA 68
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
++ ++I+ D +PG+ G D+L ++K+ S K+IP+V+ ++ + P I C ++GA + +
Sbjct: 69 LRPSVILLDLNLPGIDGRDILDRLKQDKSFKEIPIVVFTTSSNPKDIELCYQKGANGYLV 128
Query: 122 KPVQLADVNK 131
KP+ ++ K
Sbjct: 129 KPMDAQELKK 138
>gi|86608608|ref|YP_477370.1| response regulator [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557150|gb|ABD02107.1| response regulator [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 339
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDD R L+ LL++ Y+V+ +SGN+AL+ L + Q +LI+
Sbjct: 23 HLLIVDDQPNSRLLLGDLLQSIGYRVSEAESGNQALQML-----------KTFQPDLILL 71
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D MPG+ G+++ R+IK + + IPVV++++ + R +E GA++F KP
Sbjct: 72 DVMMPGLDGFEVCRRIKANDETRLIPVVLVTAASDHKNRVRGIEAGADDFLSKP 125
>gi|242067499|ref|XP_002449026.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
gi|241934869|gb|EES08014.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
Length = 697
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 83/163 (50%), Gaps = 9/163 (5%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R+++ LL+ Y+V AV G KA E + + +L++
Sbjct: 55 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVM---------RGRAYAFDLVL 105
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G LL +I + K+IPV++MSS++ + +C+++GA +F +KPV+ +
Sbjct: 106 TEVAMPSLSGIQLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNE 165
Query: 129 VNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLN 171
+ L H+ + + + + NN + A+ ++T N
Sbjct: 166 LRNLWQHVWRRHAMNCQTNGSENNAASNHISANVANGSKTGEN 208
>gi|168015656|ref|XP_001760366.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688380|gb|EDQ74757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 25/180 (13%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD + K++ER+L+ Y VT +S KAL +L E+ +L+I+D
Sbjct: 17 VLVVDDDNVILKILERMLRECKYAVTTCNSATKAL---AMLRENRSY------FDLVISD 67
Query: 71 YCMPGMTGYDLLRKIKESASLK-DIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MP M G+ LL E+ L+ D+PV++MS + + R ++ GA ++ LKPV+L ++
Sbjct: 68 VYMPDMDGFKLL----EAIGLELDLPVIMMSRDGEIDSVMRGIKHGACDYLLKPVRLEEL 123
Query: 130 NKLKPHLMKG------ISKEIKEPNNINNKRKGLEEIDSADRTRT-RLNDTI----DINN 178
+ H+++ +SKE + K + + D+ R R RL D D+NN
Sbjct: 124 RNIWQHVVRKLVSPILVSKEESGELDEYPKHQDNADFDATSRKRKERLEDETQLVEDVNN 183
>gi|359490833|ref|XP_003634174.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 688
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 11/134 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R++I LL+ SY+V AV G KA E L ++ ++LI+T+
Sbjct: 44 LVEADDST--RQIIAALLRKCSYKVAAVPDGLKAWEVL---------KARPHNIDLILTE 92
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++G+ LL + E K+IPV++MSS + + +C+ GA +F +KPV+ ++
Sbjct: 93 VELPSISGFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELK 152
Query: 131 KLKPHLMKGISKEI 144
L H+ + S +
Sbjct: 153 NLWQHVWRRQSSTV 166
>gi|428212579|ref|YP_007085723.1| family 3 adenylate cyclase [Oscillatoria acuminata PCC 6304]
gi|428000960|gb|AFY81803.1| family 3 adenylate cyclase [Oscillatoria acuminata PCC 6304]
Length = 354
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
Q VL VDD +R L+ R LK Y V + G KALE + + +L+
Sbjct: 5 QASVLVVDDVEANRDLLCRRLKRQGYHVKIAEDGLKALELI-----------RAEPFDLV 53
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+ D MP + GY +L +IK +SL+ IPV+++S+ + + +C+E GAE++ KP
Sbjct: 54 LLDIMMPHLNGYQVLEEIKADSSLRHIPVIMISAVDDIDSVVKCIELGAEDYLSKP 109
>gi|376003885|ref|ZP_09781685.1| putative bifunctional two-component response regulator,
CheY-like/Guanylate cyclase [Arthrospira sp. PCC 8005]
gi|375327705|emb|CCE17438.1| putative bifunctional two-component response regulator,
CheY-like/Guanylate cyclase [Arthrospira sp. PCC 8005]
Length = 352
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD+ I+R L+ R L+ Y V +G +AL+ + + ++L++ D
Sbjct: 8 VLIVDDNEINRDLLARRLQRQGYDVLVASNGFEALKIM-----------RSTALDLVLLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M GY +L +K L+ IPV+++S+ N I RC+E GAE++ KP
Sbjct: 57 IMMPQMNGYQVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLSKP 109
>gi|220031090|gb|ACL78710.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031114|gb|ACL78722.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031168|gb|ACL78749.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031170|gb|ACL78750.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031190|gb|ACL78760.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031192|gb|ACL78761.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031194|gb|ACL78762.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220031022|gb|ACL78676.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220031016|gb|ACL78673.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031020|gb|ACL78675.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031024|gb|ACL78677.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030948|gb|ACL78639.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030942|gb|ACL78636.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030860|gb|ACL78595.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031184|gb|ACL78757.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030678|gb|ACL78504.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030682|gb|ACL78506.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030684|gb|ACL78507.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030712|gb|ACL78521.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030780|gb|ACL78555.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030836|gb|ACL78583.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030840|gb|ACL78585.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030676|gb|ACL78503.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030680|gb|ACL78505.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030694|gb|ACL78512.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030842|gb|ACL78586.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030848|gb|ACL78589.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|298529775|ref|ZP_07017178.1| response regulator receiver protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511211|gb|EFI35114.1| response regulator receiver protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 122
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS R LI ++K + VT + G ALE L V+LIIT
Sbjct: 4 HILMVDDSKTVRNLIAFIVKKEGFHVTTAEDGLDALEKL----------YAASNVDLIIT 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G+ ++ ++E + +D+PV+I+S+E + L GA + +KP Q
Sbjct: 54 DINMPRMDGFTFVQNLREQEAFRDVPVIILSTEGQEKDKEQGLSLGANLYMVKPAQ 109
>gi|398814805|ref|ZP_10573483.1| putative regulator of cell autolysis [Brevibacillus sp. BC25]
gi|398035893|gb|EJL29119.1| putative regulator of cell autolysis [Brevibacillus sp. BC25]
Length = 1042
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 11/115 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD ++ +++E +L Y+VT V SG +AL L D L+I+D
Sbjct: 703 LLIVDDDPVNLQVLEAILPPDEYEVTMVTSGKEALAILDTKEWD-----------LVISD 751
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MP M+GY+L R I+E +L ++PV+++++ + P I GA ++ KPV+
Sbjct: 752 IMMPQMSGYELTRMIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVE 806
>gi|303247060|ref|ZP_07333335.1| response regulator receiver modulated CheW protein [Desulfovibrio
fructosovorans JJ]
gi|302491486|gb|EFL51371.1| response regulator receiver modulated CheW protein [Desulfovibrio
fructosovorans JJ]
Length = 329
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ--V 64
S++ L DDS++ R++++ LL+ + + VTAV +G +A E L + + S+ + +
Sbjct: 188 SRYRALVADDSVLVREMLKDLLQKAGFDVTAVQNGREAWELLLQIKGKSEAESRPLSDYI 247
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSS 101
++++ D MP M G++L ++IKE SLK +PV++ SS
Sbjct: 248 HVMVADIEMPAMDGHNLTKRIKEDPSLKQLPVILFSS 284
>gi|224128053|ref|XP_002320232.1| pseudo response regulator [Populus trichocarpa]
gi|222861005|gb|EEE98547.1| pseudo response regulator [Populus trichocarpa]
Length = 717
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R++I LL+ SY+V AV G A E L ++LI+T+
Sbjct: 46 VLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETL---------KGGPHNIDLILTE 96
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++GY LL + E A K+IPV++MSS++ S + +C+ +GA +F +KPV+ ++
Sbjct: 97 VELPLISGYALLTLVTEHAVCKNIPVIMMSSQDSISMVLKCMLKGAADFLIKPVRKNELR 156
Query: 131 KLKPHLMKGISKEIKE-PNNINNKRKGLEEIDSA 163
L H+ + + + P N+ +K + EI++A
Sbjct: 157 NLWQHVWRRQTLSAGQIPQNL-HKVEASSEINAA 189
>gi|334118352|ref|ZP_08492441.1| response regulator receiver sensor signal transduction histidine
kinase [Microcoleus vaginatus FGP-2]
gi|333459359|gb|EGK87972.1| response regulator receiver sensor signal transduction histidine
kinase [Microcoleus vaginatus FGP-2]
Length = 395
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
SQF +L VDD + +IE LL YQ+ SG +A+ L L + D L
Sbjct: 20 SQFSLLIVDDEPDNFDVIETLLSEQDYQLHYAASGQEAIASLDLFDPD-----------L 68
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
I+ D MPG+ G ++ R+IK + + +P++++++ + S + CL GA++F KPV
Sbjct: 69 ILLDVMMPGIDGIEICRQIKAMSKWQAVPIIMVTALSSKSDLANCLTAGADDFISKPVNA 128
Query: 127 ADVNKLKPHLMKGISKEIKEPNNINN 152
++ + + H M I ++ +NI N
Sbjct: 129 IEL-RARVHSMLRIKQQY---DNIQN 150
>gi|357633416|ref|ZP_09131294.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
gi|386391833|ref|ZP_10076614.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfovibrio sp. U5L]
gi|357581970|gb|EHJ47303.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
gi|385732711|gb|EIG52909.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfovibrio sp. U5L]
Length = 122
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS R L+ +++ ++VTA + G LE L T+ QV +LIIT
Sbjct: 4 HILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKL-------YTDPQV---DLIIT 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G ++ ++E +DIP+V++S+E I+ L GA + +KP Q
Sbjct: 54 DINMPRMDGITFIKTVREQEVYRDIPIVVLSTEGEERDIHAGLSIGANLYMVKPAQ 109
>gi|402488137|ref|ZP_10834952.1| response regulator receiver protein [Rhizobium sp. CCGE 510]
gi|401813305|gb|EJT05652.1| response regulator receiver protein [Rhizobium sp. CCGE 510]
Length = 262
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ ++G KALE L N D
Sbjct: 122 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSVAENGGKALEILKA-NRD-------- 172
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ S ++ ++ +SS + R L+ G +F L+
Sbjct: 173 -IGLMITDYNMPDIDGFELTRRIRSSIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 231
Query: 123 P 123
P
Sbjct: 232 P 232
>gi|220031174|gb|ACL78752.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220031018|gb|ACL78674.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031026|gb|ACL78678.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031028|gb|ACL78679.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030672|gb|ACL78501.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030674|gb|ACL78502.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030686|gb|ACL78508.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030688|gb|ACL78509.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030690|gb|ACL78510.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030700|gb|ACL78515.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030702|gb|ACL78516.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030710|gb|ACL78520.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030714|gb|ACL78522.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030716|gb|ACL78523.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030718|gb|ACL78524.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030720|gb|ACL78525.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030732|gb|ACL78531.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030746|gb|ACL78538.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030756|gb|ACL78543.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030768|gb|ACL78549.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030770|gb|ACL78550.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030800|gb|ACL78565.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030812|gb|ACL78571.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030814|gb|ACL78572.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030816|gb|ACL78573.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030818|gb|ACL78574.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030826|gb|ACL78578.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030844|gb|ACL78587.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030852|gb|ACL78591.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|190892206|ref|YP_001978748.1| two-component response regulator protein [Rhizobium etli CIAT 652]
gi|190697485|gb|ACE91570.1| two-component response regulator protein [Rhizobium etli CIAT 652]
Length = 262
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ +SG KALE L N D
Sbjct: 122 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEILKA-NRD-------- 172
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ + ++ ++ +SS + R L+ G +F L+
Sbjct: 173 -IGLMITDYNMPDIDGFELTRRIRANIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 231
Query: 123 P 123
P
Sbjct: 232 P 232
>gi|374622282|ref|ZP_09694808.1| response regulator receiver protein [Ectothiorhodospira sp. PHS-1]
gi|373941409|gb|EHQ51954.1| response regulator receiver protein [Ectothiorhodospira sp. PHS-1]
Length = 130
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTA-VDSGNKALEFLGLLNEDEQTNSQVIQV 64
D +L VDD R++I+ LL+ Y TA D GN AL L N D
Sbjct: 2 DKNMKILIVDDFSTMRRIIKNLLRDLGYNNTAEADDGNTALPMLQNGNYD---------- 51
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
++TD+ MPGM G DLLR ++ LKD+PV+++++E +I + G + +KP
Sbjct: 52 -FLVTDWNMPGMPGIDLLRAVRADPRLKDMPVLMVTAEAKREQIVEAAQAGVNGYIVKP 109
>gi|357512643|ref|XP_003626610.1| Two-component response regulator-like PRR37 [Medicago truncatula]
gi|87240854|gb|ABD32712.1| Response regulator receiver; CCT [Medicago truncatula]
gi|355501625|gb|AES82828.1| Two-component response regulator-like PRR37 [Medicago truncatula]
Length = 636
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
V + VL V+ R +I LL+ Y+V AV G KA E L ++ +
Sbjct: 9 VPPTMLRVLLVEPDDSTRHIISALLRNCGYKVAAVRDGLKAWETL---------KNKSLD 59
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
++L++T+ +P ++G+ LL +I + + K+IP+++MSS++ S + + + GA +F +KP
Sbjct: 60 IDLVLTEVDLPSISGFSLLTQIMDHHNCKNIPLIMMSSQDSVSTVFKFMLNGAVDFLIKP 119
Query: 124 VQLADVNKLKPHLMKGISKEIKEPNNINNKRKGLE 158
V+ ++ L H+ + + P NI + L+
Sbjct: 120 VRRNELRNLWQHVWRRNTTITMPPQNITFPQNKLD 154
>gi|410099296|ref|ZP_11294268.1| hypothetical protein HMPREF1076_03446 [Parabacteroides goldsteinii
CL02T12C30]
gi|409219318|gb|EKN12281.1| hypothetical protein HMPREF1076_03446 [Parabacteroides goldsteinii
CL02T12C30]
Length = 372
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 12/139 (8%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+ VL VDD + L++ +LK Y++ DSG KAL L D+ N LI+
Sbjct: 8 YTVLIVDDVPTNVMLVQAILKKEGYKLLTCDSGAKALR----LAHDKHPN-------LIL 56
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
D MP M GY++L+ +K + DIPV+IMS+ + I + + GA E+ KP Q +
Sbjct: 57 LDIMMPEMDGYEVLQHLKSNPDTNDIPVIIMSALSDMQSIVKGYQLGATEYVTKPFQREE 116
Query: 129 VNKLKPHLMKGIS-KEIKE 146
+ K H + S K IK+
Sbjct: 117 LVKRVAHRFELFSIKRIKQ 135
>gi|417111614|ref|ZP_11964188.1| response regulator receiver protein [Rhizobium etli CNPAF512]
gi|327187968|gb|EGE55200.1| response regulator receiver protein [Rhizobium etli CNPAF512]
Length = 276
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ +SG KALE L N D
Sbjct: 136 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEILKA-NRD-------- 186
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ + ++ ++ +SS + R L+ G +F L+
Sbjct: 187 -IGLMITDYNMPDIDGFELTRRIRANIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 245
Query: 123 PV 124
P
Sbjct: 246 PF 247
>gi|218189558|gb|EEC71985.1| hypothetical protein OsI_04831 [Oryza sativa Indica Group]
Length = 582
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL VDD K++E++L+ SY+VT AL+ L E+ N + +++I
Sbjct: 10 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDIL-----RERKN----KFDIVI 60
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
+D MP M G+ LL I D+PV++MS + SR+ + ++ GA ++ LKPV++ +
Sbjct: 61 SDVNMPDMDGFKLLEHIGLEM---DLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKE 117
Query: 129 VNKLKPHLMKGISKEIKE 146
+ + H+ + E+KE
Sbjct: 118 LRNIWQHVYRKKMHEVKE 135
>gi|118790785|tpd|FAA00259.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|222619710|gb|EEE55842.1| hypothetical protein OsJ_04457 [Oryza sativa Japonica Group]
Length = 582
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL VDD K++E++L+ SY+VT AL+ L E+ N + +++I
Sbjct: 10 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDIL-----RERKN----KFDIVI 60
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
+D MP M G+ LL I D+PV++MS + SR+ + ++ GA ++ LKPV++ +
Sbjct: 61 SDVNMPDMDGFKLLEHIGLEM---DLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKE 117
Query: 129 VNKLKPHLMKGISKEIKE 146
+ + H+ + E+KE
Sbjct: 118 LRNIWQHVYRKKMHEVKE 135
>gi|220031034|gb|ACL78682.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031048|gb|ACL78689.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031054|gb|ACL78692.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030966|gb|ACL78648.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030954|gb|ACL78642.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030926|gb|ACL78628.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030952|gb|ACL78641.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031038|gb|ACL78684.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030918|gb|ACL78624.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030934|gb|ACL78632.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030996|gb|ACL78663.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031044|gb|ACL78687.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031072|gb|ACL78701.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031074|gb|ACL78702.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031080|gb|ACL78705.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031082|gb|ACL78706.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031086|gb|ACL78708.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031088|gb|ACL78709.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031110|gb|ACL78720.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031138|gb|ACL78734.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031140|gb|ACL78735.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031142|gb|ACL78736.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031144|gb|ACL78737.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031164|gb|ACL78747.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031166|gb|ACL78748.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031176|gb|ACL78753.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031178|gb|ACL78754.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031182|gb|ACL78756.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031186|gb|ACL78758.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031188|gb|ACL78759.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030882|gb|ACL78606.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030896|gb|ACL78613.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030920|gb|ACL78625.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031032|gb|ACL78681.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030706|gb|ACL78518.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|168027167|ref|XP_001766102.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
gi|162682745|gb|EDQ69161.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
Length = 1143
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 74/124 (59%), Gaps = 9/124 (7%)
Query: 15 DDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCMP 74
+D R ++ LL+ +Y+VT+V +G+ A GLL E+ NS +L++TD MP
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAW---GLL---EEANSNF---DLVLTDVVMP 239
Query: 75 GMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKP 134
++G +L K+ + + K +P+VIMSS + + + RCL +GA ++ +KPV+ ++ L
Sbjct: 240 CLSGVGILSKMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQ 299
Query: 135 HLMK 138
H+ +
Sbjct: 300 HVWR 303
>gi|86607232|ref|YP_475995.1| response regulator [Synechococcus sp. JA-3-3Ab]
gi|86555774|gb|ABD00732.1| response regulator [Synechococcus sp. JA-3-3Ab]
Length = 332
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 76/131 (58%), Gaps = 12/131 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+ +DD ++R+ I +LK+S+Y+V + +SG A E L L+E E + LII D
Sbjct: 8 IWVIDDDPVNRRYIGEVLKSSNYRVESWESGQLAWEHLQTLDESEWPD-------LIICD 60
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSEN-IPSRINRCLEEGAEEFFLKPVQLADV 129
+ MPG++G +L R++K + + I +++++ + + R+ L+ GA+EF KP+ D
Sbjct: 61 WVMPGLSGVELCRRLKNLPAGQFIYFILLTARSEVEDRVQ-GLDAGADEFIAKPI---DP 116
Query: 130 NKLKPHLMKGI 140
+L+ + G+
Sbjct: 117 EELRARVRAGL 127
>gi|409993016|ref|ZP_11276175.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
gi|409936121|gb|EKN77626.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
Length = 352
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD+ I+R L+ R L+ Y V +G +AL+ + + ++L++ D
Sbjct: 8 VLIVDDNEINRDLLARRLQKQGYDVLVASNGFEALKIM-----------RSTPLDLVLLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M GY +L +K L+ IPV+++S+ N I RC+E GAE++ KP
Sbjct: 57 IMMPQMNGYQVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLSKP 109
>gi|374578742|ref|ZP_09651836.1| putative regulator of cell autolysis [Desulfosporosinus youngiae
DSM 17734]
gi|374414824|gb|EHQ87259.1| putative regulator of cell autolysis [Desulfosporosinus youngiae
DSM 17734]
Length = 1020
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S+F +LAVDD + K + +L Y VT + AL L +Q +L
Sbjct: 689 SKFSILAVDDEYSNLKALLNMLTVCQYNVTVAGNAKSALLLL----------KGALQYDL 738
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
I D MPGM GY+ RKI+E S ++P+++++++ +P + GA +F KP +
Sbjct: 739 CILDVMMPGMDGYEACRKIREVYSPLELPILLLTAKALPDELEAGFRAGANDFIAKPFE 797
>gi|374999155|ref|YP_004974653.1| Chemotaxis sensor histidine kinase CheA [Azospirillum lipoferum 4B]
gi|357426580|emb|CBS89509.1| Chemotaxis sensor histidine kinase CheA [Azospirillum lipoferum 4B]
Length = 747
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 10/118 (8%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
T ++ H+L VDDSI R L + +L+ Y+VT G +ALE L S+ ++V
Sbjct: 624 TPARAHILVVDDSITTRTLEKSILEAHGYRVTLCVDGREALERL----------SEGMEV 673
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
LII+D MP M G+ LL+ +K L +IPV++++S R L GA+ + +K
Sbjct: 674 GLIISDVEMPRMDGFALLQAVKADKHLAEIPVILVTSRASDEDRERGLRLGADAYIVK 731
>gi|220030936|gb|ACL78633.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030912|gb|ACL78621.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030914|gb|ACL78622.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030886|gb|ACL78608.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030892|gb|ACL78611.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030900|gb|ACL78615.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031030|gb|ACL78680.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031036|gb|ACL78683.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031052|gb|ACL78691.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031056|gb|ACL78693.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030790|gb|ACL78560.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|254415503|ref|ZP_05029263.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
gi|196177684|gb|EDX72688.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
Length = 510
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 80/144 (55%), Gaps = 16/144 (11%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L VDD++ + +L+ L + + V AV SG +AL+ + + D LI+
Sbjct: 7 QILLVDDTVANLQLVSDFLMKAGFNVLAVKSGIQALKIVAITEPD-----------LILL 55
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSS---ENIPSRINRCLEEGAEEFFLKPVQL 126
D MP M G+++ R++K +DIPV+ M++ PS + L+ GA ++ KP+QL
Sbjct: 56 DVVMPEMDGFEVCRRLKAQEETQDIPVIFMTAVADRANPSYKIKGLKLGAVDYISKPIQL 115
Query: 127 ADV-NKLKPHL-MKGISKEIKEPN 148
+V +++ HL ++ +++++ E N
Sbjct: 116 EEVLLRVQTHLQLRALTQQLTEQN 139
>gi|65329125|gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|385811128|ref|YP_005847524.1| response regulator [Ignavibacterium album JCM 16511]
gi|383803176|gb|AFH50256.1| Response regulator [Ignavibacterium album JCM 16511]
Length = 116
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 11/114 (9%)
Query: 12 LAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDY 71
+ DDS I RKLI L Y++ +V G +ALE L N ++L+ITD
Sbjct: 1 MVADDSPIIRKLITFSLSVKGYEIISVSDGMEALEMLPREN-----------IDLLITDL 49
Query: 72 CMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MP + G++L++ I+E+ LK+ P++++S+ + I R L GA+ + +KP +
Sbjct: 50 NMPNVDGFELIKAIRENDDLKNTPIIVLSNLSETGDIERALHYGADSYLIKPFE 103
>gi|220031172|gb|ACL78751.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220031098|gb|ACL78714.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220031042|gb|ACL78686.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220031040|gb|ACL78685.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030964|gb|ACL78647.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030930|gb|ACL78630.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030932|gb|ACL78631.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030946|gb|ACL78638.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030950|gb|ACL78640.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030910|gb|ACL78620.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031060|gb|ACL78695.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030906|gb|ACL78618.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030928|gb|ACL78629.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030894|gb|ACL78612.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030890|gb|ACL78610.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030884|gb|ACL78607.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030908|gb|ACL78619.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030866|gb|ACL78598.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030868|gb|ACL78599.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030872|gb|ACL78601.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030878|gb|ACL78604.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030940|gb|ACL78635.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031062|gb|ACL78696.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030858|gb|ACL78594.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|269791972|ref|YP_003316876.1| CheA signal transduction histidine kinase [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269099607|gb|ACZ18594.1| CheA signal transduction histidine kinase [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 695
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 11/107 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+DS+ R L+ L+ + YQVT G +A E +++ D +L+ITD
Sbjct: 578 ILVVEDSVTSRALLRNLMTSLGYQVTTAADGQEAWE---VISRDPH--------HLVITD 626
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAE 117
MP M G++L R+IK S +L+ IPV++++S P + R +E GA+
Sbjct: 627 VEMPRMDGFELTRRIKGSPALRSIPVILVTSLESPEDVQRGIEAGAD 673
>gi|218673840|ref|ZP_03523509.1| two-component response regulator protein [Rhizobium etli GR56]
Length = 262
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ +SG KALE L N D
Sbjct: 122 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEILKA-NRD-------- 172
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ + ++ ++ +SS + R L+ G +F L+
Sbjct: 173 -IGLMITDYNMPDIDGFELTRRIRANIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 231
Query: 123 P 123
P
Sbjct: 232 P 232
>gi|67005937|gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 74/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LLK SY++TAV LE +L EDE++ ++L++T+
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEITAVPD---VLEAWRIL-EDEKSC-----IDLVLTE 116
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP +G LL KI +LK+IPV++MSS + + +CL GA +F +KP++ ++
Sbjct: 117 VDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELK 176
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 177 NLWQHVWR 184
>gi|220030864|gb|ACL78597.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030984|gb|ACL78657.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030986|gb|ACL78658.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030992|gb|ACL78661.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030998|gb|ACL78664.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031000|gb|ACL78665.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031002|gb|ACL78666.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031004|gb|ACL78667.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031006|gb|ACL78668.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031008|gb|ACL78669.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031010|gb|ACL78670.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031012|gb|ACL78671.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|56784051|dbj|BAD82798.1| putative response regulator 11 [Oryza sativa Japonica Group]
Length = 586
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL VDD K++E++L+ SY+VT AL+ L E+ N + +++I
Sbjct: 10 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDIL-----RERKN----KFDIVI 60
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
+D MP M G+ LL I D+PV++MS + SR+ + ++ GA ++ LKPV++ +
Sbjct: 61 SDVNMPDMDGFKLLEHIGLEM---DLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKE 117
Query: 129 VNKLKPHLMKGISKEIKE 146
+ + H+ + E+KE
Sbjct: 118 LRNIWQHVYRKKMHEVKE 135
>gi|386817120|ref|ZP_10104338.1| integral membrane sensor hybrid histidine kinase [Thiothrix nivea
DSM 5205]
gi|386421696|gb|EIJ35531.1| integral membrane sensor hybrid histidine kinase [Thiothrix nivea
DSM 5205]
Length = 792
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDD ++R LL + TAVDSG +A+ L EQ +LI
Sbjct: 670 HILLVDDDEMNRFFGRELLNRLNATTTAVDSGAEAIHQL------EQHT-----FDLIFM 718
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP M GY+ RKI+ +P++ +++ I RCL+ G ++ KP L D+
Sbjct: 719 DVSMPEMDGYETTRKIRTDPRFAKLPIIALTAHAITGEKERCLDAGMNDYLTKPFALVDM 778
Query: 130 NKL 132
L
Sbjct: 779 QTL 781
>gi|220030692|gb|ACL78511.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030696|gb|ACL78513.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030698|gb|ACL78514.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030704|gb|ACL78517.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030708|gb|ACL78519.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030722|gb|ACL78526.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030724|gb|ACL78527.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030728|gb|ACL78529.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030730|gb|ACL78530.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030734|gb|ACL78532.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030736|gb|ACL78533.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030738|gb|ACL78534.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030740|gb|ACL78535.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030742|gb|ACL78536.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030744|gb|ACL78537.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030748|gb|ACL78539.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030750|gb|ACL78540.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030752|gb|ACL78541.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030754|gb|ACL78542.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030758|gb|ACL78544.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030760|gb|ACL78545.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030762|gb|ACL78546.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030764|gb|ACL78547.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030766|gb|ACL78548.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030772|gb|ACL78551.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030774|gb|ACL78552.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030776|gb|ACL78553.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030778|gb|ACL78554.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030782|gb|ACL78556.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030784|gb|ACL78557.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030786|gb|ACL78558.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030788|gb|ACL78559.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030792|gb|ACL78561.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030794|gb|ACL78562.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030796|gb|ACL78563.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030798|gb|ACL78564.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030802|gb|ACL78566.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030804|gb|ACL78567.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030806|gb|ACL78568.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030808|gb|ACL78569.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030810|gb|ACL78570.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030820|gb|ACL78575.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030822|gb|ACL78576.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030824|gb|ACL78577.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030828|gb|ACL78579.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030830|gb|ACL78580.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030832|gb|ACL78581.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030834|gb|ACL78582.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030838|gb|ACL78584.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030846|gb|ACL78588.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030850|gb|ACL78590.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|91204332|emb|CAJ71985.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 340
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 77/140 (55%), Gaps = 16/140 (11%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+LAVDDS D ++I +LL + Y+V D+ AL LG +TN ++L++ D
Sbjct: 215 ILAVDDSNTDLRIIRKLL-GNDYKVLVTDNPGHALSTLG------KTN-----IDLVLMD 262
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV- 129
MPG+ G L +IK +A ++D+P++I S+ + R + GA +F +KPV +
Sbjct: 263 IYMPGVDGITLCERIKRNAMVEDVPIIICSAHPTQENVIRAVRAGAADFIVKPVTRQKLM 322
Query: 130 NKLKPHLMKGISKEIKEPNN 149
K+ H++ +K +K P N
Sbjct: 323 EKINKHML---NKSLKIPAN 339
>gi|220030888|gb|ACL78609.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|346991425|ref|ZP_08859497.1| adenylate/guanylate cyclase [Ruegeria sp. TW15]
Length = 341
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 11/121 (9%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
++D+ H+L VDD+ ++R L+ R ++ +Q + ++G A+E L +N
Sbjct: 1 MSDAPGHLLIVDDNKVNRLLLSRSVELLGHQASVAENGRVAMEML--------SNQPF-- 50
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+L++ D MP M G+ +L IK L+D+PV++ SS + RC+E GAE++ KP
Sbjct: 51 -DLLLLDIEMPEMDGFQVLEAIKSDTDLRDLPVIVTSSVEGLDNVVRCIELGAEDYLPKP 109
Query: 124 V 124
V
Sbjct: 110 V 110
>gi|220031046|gb|ACL78688.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031084|gb|ACL78707.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031092|gb|ACL78711.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031116|gb|ACL78723.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031118|gb|ACL78724.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031120|gb|ACL78725.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031122|gb|ACL78726.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031124|gb|ACL78727.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031126|gb|ACL78728.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031128|gb|ACL78729.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031130|gb|ACL78730.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031132|gb|ACL78731.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031134|gb|ACL78732.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031152|gb|ACL78741.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031154|gb|ACL78742.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031196|gb|ACL78763.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031200|gb|ACL78765.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031202|gb|ACL78766.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|65329050|gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030874|gb|ACL78602.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030916|gb|ACL78623.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031014|gb|ACL78672.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|62868803|gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030880|gb|ACL78605.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030726|gb|ACL78528.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|418406594|ref|ZP_12979913.1| two component response regulator [Agrobacterium tumefaciens 5A]
gi|358007087|gb|EHJ99410.1| two component response regulator [Agrobacterium tumefaciens 5A]
Length = 430
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
++T+ F VL VDD R + +L+ +++V+ SG +ALE L SQ
Sbjct: 118 ILTNRLFSVLVVDDVRTARSGLVEILERQNFRVSEAHSGKQALEIL----------SQDP 167
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP M GY+L R+I++S S +D+ V+ +SS L+ GA +F +
Sbjct: 168 SIQLVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSASFLKAGASDFVYR 227
Query: 123 P 123
P
Sbjct: 228 P 228
>gi|242059591|ref|XP_002458941.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
gi|241930916|gb|EES04061.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
Length = 579
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 76/136 (55%), Gaps = 12/136 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD K++E++L+ SY+VT + AL+ L E+ N + +++I+D
Sbjct: 15 VLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVALQIL-----RERRN----KFDIVISD 65
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL I D+PV++MS + SR+ + ++ GA ++ LKPV++ ++
Sbjct: 66 VNMPDMDGFKLLELIGLEM---DLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELR 122
Query: 131 KLKPHLMKGISKEIKE 146
+ H+ + E+KE
Sbjct: 123 NIWQHVYRKKMHEVKE 138
>gi|220030958|gb|ACL78644.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030956|gb|ACL78643.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|381171602|ref|ZP_09880745.1| sensory/regulatory protein RpfC [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380687975|emb|CCG37232.1| sensory/regulatory protein RpfC [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 726
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 13/121 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD +R +++RLL+ + ++VT V+ + L+ + +ED + +I D
Sbjct: 464 MLVADDHEANRMVLQRLLEKAGHKVTCVNGAEQVLDVMA--DED---------FDAVIVD 512
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
MPGM+G D+L++++ +++ ++ PVV++S++ P I C + GA F KPV A
Sbjct: 513 LHMPGMSGLDMLKQLRVMQASGIRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAK 572
Query: 129 V 129
+
Sbjct: 573 L 573
>gi|65329070|gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|65329087|gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gi|65329107|gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030976|gb|ACL78653.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030978|gb|ACL78654.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030994|gb|ACL78662.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|386718407|ref|YP_006184733.1| Sensory/regulatory protein rpfC [Stenotrophomonas maltophilia D457]
gi|384077969|emb|CCH12558.1| Sensory/regulatory protein rpfC [Stenotrophomonas maltophilia D457]
Length = 725
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 13/117 (11%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L DD +R +++RLL+ + ++V VD G L+ L D + ++ +I
Sbjct: 461 QILVADDHEANRMVLQRLLQKAGHRVLCVDGGEAVLDALA----DSEFDA-------VIV 509
Query: 70 DYCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MPGM+G D+L++++ ++ PV+++S++ P I RC + GA F KPV
Sbjct: 510 DLHMPGMSGLDMLKELRVMQAGGGPRTPVLVLSADVTPEAIQRCTQAGAHAFLAKPV 566
>gi|325292439|ref|YP_004278303.1| two component response regulator [Agrobacterium sp. H13-3]
gi|325060292|gb|ADY63983.1| two component response regulator [Agrobacterium sp. H13-3]
Length = 430
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
++T+ F VL VDD R + +L+ +++V+ SG +ALE L SQ
Sbjct: 118 ILTNRLFSVLVVDDVRTARSGLVEILERQNFRVSEAHSGKQALEIL----------SQDP 167
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP M GY+L R+I++S S +D+ V+ +SS L+ GA +F +
Sbjct: 168 SIQLVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSASFLKAGASDFVYR 227
Query: 123 P 123
P
Sbjct: 228 P 228
>gi|294666715|ref|ZP_06731951.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603540|gb|EFF46955.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 726
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 13/121 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD +R +++RLL+ + ++VT V+ + L+ + +ED + +I D
Sbjct: 464 MLVADDHEANRMVLQRLLEKAGHKVTCVNGAEQVLDVMA--DED---------FDAVIVD 512
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
MPGM+G D+L++++ +++ ++ PVV++S++ P I C + GA F KPV A
Sbjct: 513 LHMPGMSGLDMLKQLRVMQASGIRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAK 572
Query: 129 V 129
+
Sbjct: 573 L 573
>gi|220030862|gb|ACL78596.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031064|gb|ACL78697.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|392410312|ref|YP_006446919.1| PAS domain S-box [Desulfomonile tiedjei DSM 6799]
gi|390623448|gb|AFM24655.1| PAS domain S-box [Desulfomonile tiedjei DSM 6799]
Length = 1147
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD+ +R+++E L + T VD G AL + +E+ + L+ITD
Sbjct: 752 VLVVDDNATNRRILENTLLQWQTKPTIVDGGEAALHAMKSAHEEGRP------FKLVITD 805
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G++L+R+I E S +++++S RC++ G + LKP++ +D
Sbjct: 806 CMMPEMDGFELVRRINEHPSWATPTIIMLTSAGERGDAARCMKLGISAYLLKPIKQSD-- 863
Query: 131 KLKPHLMKGISKEIKEPNN 149
L IS+ +KEP +
Sbjct: 864 -----LFFTISRVLKEPQD 877
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 63/119 (52%), Gaps = 13/119 (10%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ H+L +D+ +++KL ++L+ + V+ +G +AL+ L ++ + +L+
Sbjct: 896 RLHILLAEDNAVNQKLAVKMLERMGHTVSVSANGQEALDCL-----------KIQKFDLV 944
Query: 68 ITDYCMPGMTGYDLLRKIKES--ASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+ D MP M G + R ++E S + +P+V M++ + +CL+ G + + KP+
Sbjct: 945 LMDVQMPIMDGLEATRIVREHEKTSNEHVPIVAMTAYAMKGDKEKCLDAGMDGYISKPI 1003
>gi|294624915|ref|ZP_06703570.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600794|gb|EFF44876.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 726
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 13/121 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD +R +++RLL+ + ++VT V+ + L+ + +ED + +I D
Sbjct: 464 MLVADDHEANRMVLQRLLEKAGHKVTCVNGAEQVLDVMA--DED---------FDAVIVD 512
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
MPGM+G D+L++++ +++ ++ PVV++S++ P I C + GA F KPV A
Sbjct: 513 LHMPGMSGLDMLKQLRVMQASGIRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAK 572
Query: 129 V 129
+
Sbjct: 573 L 573
>gi|220030970|gb|ACL78650.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030962|gb|ACL78646.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|239907300|ref|YP_002954041.1| chemotaxis protein CheV [Desulfovibrio magneticus RS-1]
gi|239797166|dbj|BAH76155.1| chemotaxis protein CheV [Desulfovibrio magneticus RS-1]
Length = 329
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ- 63
+ S++ L DDS++ R++++ LL + + VTAV +G +A E L + E + Q +
Sbjct: 186 SSSRYRALVADDSVLVREMLKDLLNKAGFDVTAVQNGREAWELLSQIKEKSEAEHQPLSN 245
Query: 64 -VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSS 101
V+ ++ D MP M G++L ++IK+ L+++PV++ SS
Sbjct: 246 FVHCMVADIEMPAMDGHNLTKRIKDDPVLRELPVILFSS 284
>gi|220031158|gb|ACL78744.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220031050|gb|ACL78690.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031058|gb|ACL78694.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031066|gb|ACL78698.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031068|gb|ACL78699.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031070|gb|ACL78700.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031076|gb|ACL78703.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031078|gb|ACL78704.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031094|gb|ACL78712.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031096|gb|ACL78713.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031100|gb|ACL78715.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031102|gb|ACL78716.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031104|gb|ACL78717.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031106|gb|ACL78718.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031108|gb|ACL78719.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031112|gb|ACL78721.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031136|gb|ACL78733.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031146|gb|ACL78738.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031148|gb|ACL78739.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031150|gb|ACL78740.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031156|gb|ACL78743.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031160|gb|ACL78745.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031162|gb|ACL78746.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031180|gb|ACL78755.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031198|gb|ACL78764.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030960|gb|ACL78645.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030902|gb|ACL78616.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030904|gb|ACL78617.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030922|gb|ACL78626.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030972|gb|ACL78651.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030856|gb|ACL78593.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030870|gb|ACL78600.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030876|gb|ACL78603.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030898|gb|ACL78614.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030938|gb|ACL78634.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030944|gb|ACL78637.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030968|gb|ACL78649.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030980|gb|ACL78655.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030982|gb|ACL78656.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030988|gb|ACL78659.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030990|gb|ACL78660.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|220030854|gb|ACL78592.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV V++G++A +L +D Q+N ++L++T+
Sbjct: 45 VLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL----QDMQSN-----IDLVLTE 95
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 96 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 155
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 156 KNLWAHVWR 164
>gi|329924374|ref|ZP_08279491.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
gi|328940725|gb|EGG37042.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
Length = 1021
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD ++ +++E +L Y+VT SG +AL L D L+I+D
Sbjct: 698 LLIVDDDPVNLQVLEAILPPDEYEVTMATSGKEALAVLDAKAWD-----------LVISD 746
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MP M+GY+L R+I+E +L ++PV+++++ + P I GA ++ KPV+ ++
Sbjct: 747 IMMPQMSGYELTRRIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVEALEI 805
>gi|443317340|ref|ZP_21046753.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
gi|442783029|gb|ELR92956.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
Length = 381
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 8/113 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS+ +R L++ LL+ Y VT ++G KAL+ + E + + LI+ D
Sbjct: 7 VLIVDDSVDNRFLLQSLLEDEGYIVTVAENGAKALDHIAGKGEAQLPD-------LILLD 59
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MPGM+GY++ R ++ A L IP++++++ S + L+ GA++F KP
Sbjct: 60 VMMPGMSGYEVTRWVRGQAELPFIPILLVTAHE-QSNVVEGLDAGADDFIRKP 111
>gi|312960966|ref|ZP_07775471.1| two-component response regulator [Pseudomonas fluorescens WH6]
gi|311284624|gb|EFQ63200.1| two-component response regulator [Pseudomonas fluorescens WH6]
Length = 413
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD RKL+E LL+ YQ + SG +AL + D LI+ D
Sbjct: 8 LLIVDDEPQVRKLLETLLQHEGYQTRSASSGEEALTLVAQQPPD-----------LILLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MPGM G+++ ++K + + +IP++++S+ N P L GAEEF KPV+
Sbjct: 57 VMMPGMDGFEVANRLKSNPATSNIPIIMLSALNEPGARVSGLHTGAEEFINKPVE 111
>gi|261410004|ref|YP_003246245.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
gi|261286467|gb|ACX68438.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
Length = 1045
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 39/191 (20%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L +DD ++ +++E +L Y+VT SG +AL +L+ E +L+I+D
Sbjct: 722 LLIIDDDPVNLQVLEAILPPDEYEVTMATSGKEAL---AVLDAKEW--------DLVISD 770
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M+GY+L R+I+E +L ++PV+++++ + P I GA ++ KPV+ ++
Sbjct: 771 IMMPQMSGYELTRRIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVEALEIR 830
Query: 131 --------------------------KLKPHLMKGISKEIKEPNNI--NNKRKGLEEIDS 162
+++PH + + +++ + R LEE +
Sbjct: 831 SRIEALTTIKQTVREQLRLEAAWLQAQIQPHFLFNALNAVTALSDVDLDKMRNLLEEFSN 890
Query: 163 ADRTRTRLNDT 173
R + R DT
Sbjct: 891 FLRYKFRFQDT 901
>gi|239907979|ref|YP_002954720.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
gi|239797845|dbj|BAH76834.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
Length = 122
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS R L+ +++ ++VTA + G LE L D+Q V+LIIT
Sbjct: 4 HILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLE---KLYTDQQ-------VDLIIT 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G ++ ++E +DIP+V++S+E I+ L GA + +KP Q
Sbjct: 54 DINMPRMDGITFIKTVREQDIYRDIPIVVLSTEGEERDIHAGLSIGANLYMVKPAQ 109
>gi|302878235|ref|YP_003846799.1| response regulator receiver modulated diguanylate cyclase
[Gallionella capsiferriformans ES-2]
gi|302581024|gb|ADL55035.1| response regulator receiver modulated diguanylate cyclase
[Gallionella capsiferriformans ES-2]
Length = 636
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+D KL++ +LK++ + V +G +AL + QV Q LI+
Sbjct: 323 LRVLVVEDDPATLKLLDAMLKSAGHTVALAANGLEALRMI---------RQQVPQ--LIV 371
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+D+ MP M G L RK++ES + ++I VI++++ P R+ + E GA+++ LKP+
Sbjct: 372 SDWMMPEMDGLSLCRKLRESDAWRNIYTVILTAQESPERLIQAFEAGADDYLLKPI 427
>gi|91788256|ref|YP_549208.1| response regulator receiver domain-containing protein [Polaromonas
sp. JS666]
gi|91697481|gb|ABE44310.1| response regulator receiver domain protein (CheY-like) [Polaromonas
sp. JS666]
Length = 159
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 18/160 (11%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + +L+E+LL + Y T V S LE GL E + +LI+ D
Sbjct: 12 ILVVDDQAANVQLLEQLLSNTGY--TRVRSTMNPLEVAGLHAEH--------RYDLILLD 61
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPGM G+ +++++K++ S +PV+++++E P R LE GA++F KP L +V
Sbjct: 62 LKMPGMDGFQVMQELKKNTSDDYLPVIVLTAE--PGHKLRALEAGAKDFISKPFDLVEV- 118
Query: 131 KLKPHLMKGISKEIKEPNNINN-----KRKGLEEIDSADR 165
K + H M + K+ +N + +G EID A R
Sbjct: 119 KTRIHNMLEVRLLYKKLDNYSKLLEHAVHQGTVEIDEARR 158
>gi|384254096|gb|EIE27570.1| CheY-like protein [Coccomyxa subellipsoidea C-169]
Length = 302
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD + K++E +L+ +YQVT +G ALE L + + +L+++D
Sbjct: 56 VLVVDDDPLCLKVVEHMLRRCNYQVTTCPNGKAALEKL---------RDRSVHFDLVLSD 106
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL I D+PV++MSS + + R + GA +F +KPV++ ++
Sbjct: 107 VYMPDMDGFKLLEHIGLEL---DLPVIMMSSNGETNVVLRGVTHGAVDFLIKPVRVEELR 163
Query: 131 KLKPHLMK 138
+ H+++
Sbjct: 164 NVWQHVVR 171
>gi|145340805|ref|XP_001415508.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575731|gb|ABO93800.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 270
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 12/128 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD ++ K++E++LK Y+VTA + ALE L E + +++++D
Sbjct: 7 VLVVDDDLLCLKVVEKMLKACKYKVTACSTAKTALEILRTRKE---------EFDIVLSD 57
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL I+ +L PV++MS+ + S + R + GA ++ LKPV++ ++
Sbjct: 58 VHMPDMDGFKLLEIIQFELAL---PVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELR 114
Query: 131 KLKPHLMK 138
+ H+++
Sbjct: 115 NIWQHVVR 122
>gi|386393891|ref|ZP_10078672.1| signal transduction histidine kinase [Desulfovibrio sp. U5L]
gi|385734769|gb|EIG54967.1| signal transduction histidine kinase [Desulfovibrio sp. U5L]
Length = 1255
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 13/122 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD + + + ++L +V D G KALE L DE V+ ++ D
Sbjct: 1136 VLVVDDDMRNLFALSKVLTEKGLRVLKADDGAKALEIL----RDEP------DVDAVLMD 1185
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG+ GY+ LR+I+E + D+P++ ++++ + +CL GA ++ KPV DV+
Sbjct: 1186 IMMPGLDGYEALRRIREESRFADLPLIALTAKAMKEDRGKCLAAGANDYLAKPV---DVD 1242
Query: 131 KL 132
KL
Sbjct: 1243 KL 1244
>gi|336316621|ref|ZP_08571513.1| signal transduction histidine kinase [Rheinheimera sp. A13L]
gi|335879086|gb|EGM76993.1| signal transduction histidine kinase [Rheinheimera sp. A13L]
Length = 1056
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 11/129 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD ++R L+ R+++ + V A G +ALE L Q +L+ITD
Sbjct: 830 ILVVDDHDVNRMLLVRMVEYCQHHVKACGDGKQALELL-----------QKHHFDLVITD 878
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY L I+ LKDIPV +++ RCL G E KP+ +A++
Sbjct: 879 CNMPVMDGYQLTSAIRLDPILKDIPVFGLTASAENKERQRCLHAGMNECLFKPIGIAELQ 938
Query: 131 KLKPHLMKG 139
++ +K
Sbjct: 939 QVFKAYLKS 947
>gi|281308388|gb|ADA58342.1| pseudo-response regulator 7a [Brassica rapa]
Length = 725
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ SY+V V +G +A + L LN +++++T+
Sbjct: 97 VLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNN---------HIDIVLTE 147
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI S ++IPV++MSS + I +CL +GA +F +KP++ ++
Sbjct: 148 VVMPYLSGVGLLCKILNHKSRRNIPVIMMSSHDSMGLIFKCLSKGAVDFLVKPIRKNELK 207
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 208 ILWQHVWR 215
>gi|152980997|ref|YP_001354642.1| two-component hybrid sensor and regulator [Janthinobacterium sp.
Marseille]
gi|151281074|gb|ABR89484.1| two-component hybrid sensor and regulator [Janthinobacterium sp.
Marseille]
Length = 1901
Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 11/119 (9%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+Q V+ VDDS+ R++ +RLL YQV G AL+ L Q + ++
Sbjct: 1775 TQSIVMVVDDSLTVRRVTQRLLTREGYQVVLAKDGVDALQHL-----------QSVTPDV 1823
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
++ D MP M G+DL R I++ +DIP+++++S N +E G E+ KP Q
Sbjct: 1824 MLVDIEMPRMDGFDLTRNIRDDERTRDIPIIMITSRTASKHRNYAMELGVNEYLGKPYQ 1882
>gi|344207296|ref|YP_004792437.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
JV3]
gi|343778658|gb|AEM51211.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
JV3]
Length = 724
Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 13/117 (11%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L DD +R +++RLL+ + ++V VD G L+ L D + ++ +I
Sbjct: 461 QILVADDHEANRMVLQRLLQKAGHRVLCVDGGEAVLDALA----DSEFDA-------VIV 509
Query: 70 DYCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MPGM+G D+L++++ ++ PV+++S++ P I RC + GA F KPV
Sbjct: 510 DLHMPGMSGLDMLKELRVMQAGGGPRTPVLVLSADVTPEAIQRCTQAGAHAFLAKPV 566
>gi|288960047|ref|YP_003450387.1| two-component hybrid sensor and regulator [Azospirillum sp. B510]
gi|288912355|dbj|BAI73843.1| two-component hybrid sensor and regulator [Azospirillum sp. B510]
Length = 748
Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDSI R L + +L+ Y+VT G +ALE L S+ ++V LII+
Sbjct: 630 HILVVDDSITTRTLEKSILEAHGYRVTLCVDGREALERL----------SEGMEVELIIS 679
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
D MP M G+ LL+ +K L +IPVV+++S R L GA+ + +K
Sbjct: 680 DVEMPRMDGFALLQAVKADRRLAEIPVVLVTSRASDEDRERGLRLGADAYIVK 732
>gi|126650201|ref|ZP_01722429.1| hypothetical protein BB14905_17645 [Bacillus sp. B14905]
gi|126592851|gb|EAZ86833.1| hypothetical protein BB14905_17645 [Bacillus sp. B14905]
Length = 1021
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 74/136 (54%), Gaps = 12/136 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD I+ +++E +L Y + V SG AL + Q + +L+I+D
Sbjct: 690 ILVVDDEPINLRVVETILANEQYDIVTVTSGLDAL-----------VSIQSHEWDLVISD 738
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M+GY+L+R I++ S+ D+P++++++ + P + + GA ++ KPV ++
Sbjct: 739 VMMPKMSGYELVRLIRKQFSITDLPILLLTARSQPQNLEKGFLAGANDYVTKPVDALELR 798
Query: 131 KLKPHLMKGISKEIKE 146
L+K + + I+E
Sbjct: 799 SRVAALIK-VKRSIQE 813
>gi|83310215|ref|YP_420479.1| Serine phosphatase RsbU regulator sigma subunit [Magnetospirillum
magneticum AMB-1]
gi|82945056|dbj|BAE49920.1| Serine phosphatase RsbU regulator sigma subunit [Magnetospirillum
magneticum AMB-1]
Length = 537
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+VT VL DDS +R ++ R L +QV AV G A+E Q
Sbjct: 153 LVTYPAGRVLVADDSKANRDVLVRYLSREGHQVVAVADGLAAVE---------AVFGQAF 203
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+L++ D MPGM G ++L+ IK + L+ +PV+++S+ + I RC+E GAE++ K
Sbjct: 204 --DLVLLDMIMPGMNGDEVLKAIKADSRLRSLPVIMISALDGLDSIVRCIEAGAEDYLPK 261
Query: 123 P 123
P
Sbjct: 262 P 262
>gi|194292741|ref|YP_002008648.1| response regulator receiver, chew-like domain [Cupriavidus
taiwanensis LMG 19424]
gi|193226645|emb|CAQ72596.1| putative Response regulator receiver, CheW-like domain [Cupriavidus
taiwanensis LMG 19424]
Length = 322
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ--VNLI 67
V+A DDS + R LIE+ LK V SG +A E L + + + + +Q V L+
Sbjct: 192 RVVAADDSALARGLIEQGLKALGAPVVMTKSGKEAWELLDRIAAEAASQGRPVQDDVALV 251
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV--Q 125
+TD MP M G+ L RKIK + LK +PVVI SS + + + GA+ + K V +
Sbjct: 252 LTDLEMPEMDGFTLTRKIKADSRLKSLPVVIHSSLSGEASEEHVRKVGADAYVAKFVAKE 311
Query: 126 LAD 128
LAD
Sbjct: 312 LAD 314
>gi|380512646|ref|ZP_09856053.1| regulation of pathogenicity factor rpfc protein [Xanthomonas
sacchari NCPPB 4393]
Length = 726
Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD +R +++R+L+ + ++V VD L+ L + + +I D
Sbjct: 467 ILVADDHAANRMVLQRMLQKAGHRVICVDGAEAVLDALA-----------ETEFDAVIVD 515
Query: 71 YCMPGMTGYDLLRKIK-ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MPGM+G D+LR+++ A PVV++S++ P I RC + GA F KPV
Sbjct: 516 LHMPGMSGLDMLRQLRVMQAGGPRTPVVVLSADVTPESIQRCEQAGARTFLAKPV 570
>gi|348665892|gb|EGZ05720.1| hypothetical protein PHYSODRAFT_551172 [Phytophthora sojae]
Length = 897
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 12/144 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S+ VL V+D R +LK+ Y V AV++G +AL+ L + N + +L
Sbjct: 4 SEVTVLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDVL-VANH--------AKFDL 54
Query: 67 IITDYCMPGMTGYDLLRKI-KESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
++ D +P MTG +LL +I K SA+L IP+V+ SS + CL +GA+++ +KP+Q
Sbjct: 55 VLCDVMLPVMTGIELLDQIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQ 114
Query: 126 LADVNKLKPHLMKGISKEIKEPNN 149
+ L H+ +S+ ++ +N
Sbjct: 115 VNTAKTLVRHVW--LSRRLERTSN 136
>gi|452852724|ref|YP_007494408.1| Response regulator receiver modulated metal dependent
phosphohydrolase [Desulfovibrio piezophilus]
gi|451896378|emb|CCH49257.1| Response regulator receiver modulated metal dependent
phosphohydrolase [Desulfovibrio piezophilus]
Length = 478
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS R +E LK + V +G +ALE L + NL+ITD
Sbjct: 143 ILVVDDSASVRLFLESGLKEEGFIVETATNGREALERLPDFDP-----------NLVITD 191
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G +L R IK+S +PVVIMSS + + R + EGA F +KP +A ++
Sbjct: 192 LMMPEMDGAELCRAIKQSEVHNSVPVVIMSSLSDKPLMRRLMREGAATFLIKPFSVAQLS 251
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 15/121 (12%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI--QVNLI 67
H+L VDDS R +E+ L + + VT +G AL S+ + +L+
Sbjct: 16 HILVVDDSHSVRYALEKHLMEAGFSVTLAVNGEDAL-------------SKAVDGSFDLV 62
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITD MP M GY+L +++K IP++++SS + + GA+ + K +
Sbjct: 63 ITDIDMPKMDGYELCKRLKNEFKTSHIPIIVLSSRDSDDHVEEGFRVGADAYLAKGGNIE 122
Query: 128 D 128
D
Sbjct: 123 D 123
>gi|440226990|ref|YP_007334081.1| two-component response regulator protein [Rhizobium tropici CIAT
899]
gi|440038501|gb|AGB71535.1| two-component response regulator protein [Rhizobium tropici CIAT
899]
Length = 279
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ ++G KALE L ++
Sbjct: 136 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSVAENGAKALEILKASSD--------- 186
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L++TDY MP M G++L R+I+ + ++ ++ +SS + R L+ G +F L+
Sbjct: 187 -IGLMVTDYNMPDMDGFELTRRIRATTGSHELRIIGVSSSSNRLLSARFLKAGGNDFILR 245
Query: 123 P 123
P
Sbjct: 246 P 246
>gi|116749734|ref|YP_846421.1| multi-sensor hybrid histidine kinase [Syntrophobacter fumaroxidans
MPOB]
gi|116698798|gb|ABK17986.1| PAS/PAC sensor hybrid histidine kinase [Syntrophobacter
fumaroxidans MPOB]
Length = 870
Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD ++RKL++ L+ + +V D+G AL+ N D LI+ D
Sbjct: 642 VLVVDDLDLNRKLVKEFLQNTRVEVIEADNGQTALQAAETANPD-----------LILMD 690
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPGM GY LR+++ + + IPVV +++ + I R G + + ++P
Sbjct: 691 IRMPGMDGYQALRRLRRNPGTRRIPVVALTASGMKEEIERLERSGFDGWLVRPFS----- 745
Query: 131 KLKPHLMKGISKEI--KEPNNINNKR---KGLEEIDSADRTRTRLNDTI 174
KP L+K + + I ++ I KR GL DS + D I
Sbjct: 746 --KPELLKELHQFIHDRKARTIPAKRPQASGLASADSVSSLPEHVRDEI 792
>gi|242070155|ref|XP_002450354.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
gi|241936197|gb|EES09342.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
Length = 694
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 10/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD + K++ER LK +Y T V AL+ +L E + N Q +L+I+D
Sbjct: 12 VLAVDDDRVCLKILERQLKYCNYNATVVTDARTALD---MLRERKDGN----QFDLVISD 64
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL I D+PV+++S+ N I + ++ GA ++ +KPV+L +
Sbjct: 65 VVMPNMDGFKLLELIGLEM---DLPVIMLSANNETQTIMKGIKHGACDYIVKPVRLEQLR 121
Query: 131 KLKPHLMK 138
+ H++K
Sbjct: 122 GIWTHVVK 129
>gi|449497396|ref|XP_004160390.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R++I LL+ Y+V AV G KA E L + V+LI+ +
Sbjct: 65 LVEADDST--RQIITALLRKCCYRVAAVPDGLKAWEIL---------KERPRNVDLILAE 113
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++G+ LL I + K+IPV++MSSE+ S + +C+ +GA ++ +KP++ ++
Sbjct: 114 VELPSISGFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPLRRNELR 173
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 174 NLWQHVWR 181
>gi|449456441|ref|XP_004145958.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R++I LL+ Y+V AV G KA E L + V+LI+ +
Sbjct: 65 LVEADDST--RQIITALLRKCCYRVAAVPDGLKAWEIL---------KERPRNVDLILAE 113
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++G+ LL I + K+IPV++MSSE+ S + +C+ +GA ++ +KP++ ++
Sbjct: 114 VELPSISGFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPLRRNELR 173
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 174 NLWQHVWR 181
>gi|290987002|ref|XP_002676212.1| predicted protein [Naegleria gruberi]
gi|284089813|gb|EFC43468.1| predicted protein [Naegleria gruberi]
Length = 148
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 3 MVTDSQF--HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
++TDS H+L +DD + RK + +LL Y+ G +AL L NED
Sbjct: 33 LLTDSTIVPHILVIDDDPVTRKTLAKLLSNLGYKSRTASGGKEALNLLVQDNEDP----- 87
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+ ++ D MP M G+ LR +K++ + ++IP ++MS P +++ + GAE+F
Sbjct: 88 ---FHCLLVDVLMPEMDGFGFLRVLKQAIN-REIPCIMMSGSEDPETVSKSFQCGAEDFL 143
Query: 121 LKPVQ 125
KP++
Sbjct: 144 PKPIK 148
>gi|159897134|ref|YP_001543381.1| guanylate cyclase [Herpetosiphon aurantiacus DSM 785]
gi|159890173|gb|ABX03253.1| adenylate/guanylate cyclase [Herpetosiphon aurantiacus DSM 785]
Length = 355
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 71/120 (59%), Gaps = 11/120 (9%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T +Q +L VDDS +R L++R L +Y V ++G +AL+++ Q
Sbjct: 1 MTATQPRILVVDDSEDNRYLLQRQLLRRNYGVVLAENGQQALDYV-----------QSHT 49
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
++LI+ D MP M G+++L+ +K++ L+ IPV+I+S+ + + + ++ GAE++ KP
Sbjct: 50 IDLILLDIMMPVMNGFEVLQNLKQNEQLRHIPVIIVSAADDMENVVKGIQMGAEDYLAKP 109
>gi|356556600|ref|XP_003546612.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 697
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 24/168 (14%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD I K++E LL+ Y VT N+A+E L +L E+ + +L+I+D
Sbjct: 21 VLAVDDDPICLKVLENLLRKCQYHVTTT---NQAVEALKMLRENRN------KFDLVISD 71
Query: 71 YCMPGMTGYDLLRKIKESASLK-DIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MP + G+ LL E L+ D+PV+++S+ + + + GA ++ LKPV++ ++
Sbjct: 72 VNMPDIDGFKLL----ELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEEL 127
Query: 130 NKLKPHLMK----------GISKEIKEPNNINNKRKGLEEIDSADRTR 167
+ H+++ S E K PN +GL +SAD+ +
Sbjct: 128 KNIWQHVVRRKNFDSRDQNKASNEEKAPNIAGEGSQGLRSENSADQNK 175
>gi|261408948|ref|YP_003245189.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
gi|261285411|gb|ACX67382.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
Length = 1049
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
+ + S +L VDD ++ K+I LL Y++ V +AL+ LL + E
Sbjct: 711 LALARPSDGRLLIVDDDPVNLKVIHHLLADEGYRIVTVTRAEEALQ---LLEQGEW---- 763
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+LII+D MP M+GY+L R I++ L ++P++++++ N P I+ GA ++
Sbjct: 764 ----DLIISDVMMPQMSGYELSRTIRQRYMLSELPILLLTARNRPEDIHMGFISGANDYL 819
Query: 121 LKPV 124
+KPV
Sbjct: 820 IKPV 823
>gi|356520225|ref|XP_003528764.1| PREDICTED: two-component response regulator-like PRR95-like isoform
1 [Glycine max]
Length = 703
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R++I LL+ SY V AV G KA E L + +++LI+T+
Sbjct: 31 VLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETL---------KKKAPELDLILTE 81
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++G+ LL I E K+IPV++MSS + S +C+ +GA +F +KP++ ++
Sbjct: 82 VELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELR 141
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 142 NLWQHVWR 149
>gi|115480333|ref|NP_001063760.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|68565887|sp|Q689G6.1|PRR95_ORYSJ RecName: Full=Two-component response regulator-like PRR95; AltName:
Full=Pseudo-response regulator 95; Short=OsPRR95
gi|51571881|dbj|BAD38857.1| pseudo-response regulator 95 [Oryza sativa Japonica Group]
gi|52075943|dbj|BAD46023.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|52077226|dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|113631993|dbj|BAF25674.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|215695172|dbj|BAG90363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695375|dbj|BAG90566.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641971|gb|EEE70103.1| hypothetical protein OsJ_30112 [Oryza sativa Japonica Group]
Length = 623
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 15 DDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCMP 74
DDS R +I LL+ Y+V A G KA + L + ++L++T+ +P
Sbjct: 51 DDST--RHIICALLRKCGYRVAAASDGVKAWDIL---------KEKSFNIDLVLTEVELP 99
Query: 75 GMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKP 134
M+G+ LL I E + K+IPV++MSS + S + +C+ +GA +F +KP++ ++ L
Sbjct: 100 LMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQ 159
Query: 135 HLMK 138
H+ +
Sbjct: 160 HVWR 163
>gi|339323505|ref|YP_004682399.1| peroxiredoxin [Cupriavidus necator N-1]
gi|338170113|gb|AEI81167.1| chemotaxis specific response regulator containing a CheW-domain
[Cupriavidus necator N-1]
Length = 322
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ--VNLII 68
V+A DDS + R LIE+ LK V SG +A E L + + ++ + ++ V L++
Sbjct: 193 VIAADDSALARGLIEQGLKALGAPVVMTKSGKEAWELLDRIAAEAASHGKSVEDEVALVL 252
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV--QL 126
TD MP M G+ L RKIK + LK +PVVI SS + + + GA+ + K V +L
Sbjct: 253 TDLEMPEMDGFTLTRKIKADSRLKSLPVVIHSSLSGEASEEHVRKVGADAYVAKFVAKEL 312
Query: 127 AD 128
AD
Sbjct: 313 AD 314
>gi|436841790|ref|YP_007326168.1| Response regulator receiver protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432170696|emb|CCO24067.1| Response regulator receiver protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 122
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS R L+ ++K ++VT + G LE L +V+LII+
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL----------YSAEKVDLIIS 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G+ ++ ++E + KDIP++++S+E I L GA + +KP Q
Sbjct: 54 DVNMPRMDGFTYIKTVREQDAYKDIPIIVLSTEGQEKDIQTGLNLGANLYMVKPAQ 109
>gi|300869426|ref|ZP_07114011.1| two-component hybrid sensor and regulator [Oscillatoria sp. PCC
6506]
gi|300332556|emb|CBN59209.1| two-component hybrid sensor and regulator [Oscillatoria sp. PCC
6506]
Length = 377
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
SQ +L VDD + +IE LL YQ+ +G+ ALE+L D L
Sbjct: 2 SQCSILIVDDEPDNFDVIETLLSEQDYQLYYAANGHDALEYLDTFEPD-----------L 50
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
I+ D MPG+ G ++ R+IK + + +P++++++ N S + CL GA++F KPV
Sbjct: 51 ILLDVMMPGIDGIEVCRQIKALSKWQAVPIIMVTALNSKSDLAYCLTAGADDFISKPV 108
>gi|418296397|ref|ZP_12908241.1| two component response regulator [Agrobacterium tumefaciens
CCNWGS0286]
gi|355539829|gb|EHH09067.1| two component response regulator [Agrobacterium tumefaciens
CCNWGS0286]
Length = 277
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ DSG KALE L + NS
Sbjct: 136 FLTNHRHHVLIVDDSPTARALLSSRLKRYNFRVSLADSGAKALEIL-------KANS--- 185
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L++TDY MP + G++L R+I+ ++ ++ +SS R L+ G +F L+
Sbjct: 186 DIGLVVTDYNMPDIDGFELTRRIRTVRGSHELRIIGVSSSTNRLLSARFLKAGGNDFMLR 245
Query: 123 P 123
P
Sbjct: 246 P 246
>gi|307731387|ref|YP_003908611.1| response regulator receiver protein [Burkholderia sp. CCGE1003]
gi|307585922|gb|ADN59320.1| response regulator receiver protein [Burkholderia sp. CCGE1003]
Length = 125
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 19/140 (13%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+LA+DDS R+++ L + Y+VT G + LE N+ ++ +L++T
Sbjct: 4 HILAIDDSASMRQILSATLTAAGYEVTLAADGAEGLE-----------NALAMRFDLVLT 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MPG TG DL+ +++ + + K+ P++++++E+ E GA + KP
Sbjct: 53 DQHMPGKTGLDLIAELRGNPAYKETPILVLTTESGEPFKAAAREAGATGWIEKP------ 106
Query: 130 NKLKPHLMKGISKEIKEPNN 149
L P L+ + + EP++
Sbjct: 107 --LDPDLLTELVAALAEPDH 124
>gi|226499102|ref|NP_001151536.1| two-component response regulator-like PRR95 [Zea mays]
gi|195647486|gb|ACG43211.1| two-component response regulator-like PRR95 [Zea mays]
Length = 630
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 15 DDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCMP 74
DDS R +I LL+ Y+V A G KA + L + ++L++T+ +P
Sbjct: 52 DDST--RHVISALLRKCGYRVAAASDGVKAWDIL---------KEKSFNIDLVLTEVELP 100
Query: 75 GMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKP 134
M+G+ LL I E + K+IPV++MSS + S + +C+ +GA +F +KP++ ++ L
Sbjct: 101 LMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPLRKNELRNLWQ 160
Query: 135 HLMK 138
H+ +
Sbjct: 161 HVWR 164
>gi|410463252|ref|ZP_11316782.1| diguanylate cyclase (GGDEF) domain-containing protein
[Desulfovibrio magneticus str. Maddingley MBC34]
gi|409983612|gb|EKO39971.1| diguanylate cyclase (GGDEF) domain-containing protein
[Desulfovibrio magneticus str. Maddingley MBC34]
Length = 321
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
++L VDDS R L+ +LK + Y V + +G+ A E L LL+E Q S ++LI+
Sbjct: 1 MNILIVDDSDSSRLLLSTILKGAGY-VDPLCAGS-AGEALTLLDERSQ-RSDAPDIDLIL 57
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MP M G D R IK L+DIP++I++ ++ + + R E GA +F KPV
Sbjct: 58 MDVVMPDMDGIDATRLIKADPRLRDIPIIIVTVKDEAASLERAFEAGAMDFLAKPV 113
>gi|226887927|pdb|3GT7|A Chain A, Crystal Structure Of Signal Receiver Domain Of Signal
Transduction Histidine Kinase From Syntrophus
Aciditrophicus
Length = 154
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 11/132 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+DS + ++ +L+ + YQ V +G +A+ FL L D LII+D
Sbjct: 10 ILIVEDSPTQAEHLKHILEETGYQTEHVRNGREAVRFLSLTRPD-----------LIISD 58
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY L R +K L+ IPV++++ + P + R LE GA++F KP + +
Sbjct: 59 VLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFITKPCKDVVLA 118
Query: 131 KLKPHLMKGISK 142
L+ G+ +
Sbjct: 119 SHVKRLLSGVKR 130
>gi|428306005|ref|YP_007142830.1| response regulator receiver sensor signal transduction histidine
kinase [Crinalium epipsammum PCC 9333]
gi|428247540|gb|AFZ13320.1| response regulator receiver sensor signal transduction histidine
kinase [Crinalium epipsammum PCC 9333]
Length = 365
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 76/126 (60%), Gaps = 12/126 (9%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
+G +++ H+L VDDS + L++ +L+ Y +T + G AL N EQ++
Sbjct: 5 LGNLSNKTDHILVVDDSPDNLFLVQTILEEEGYHITLAEDGRTAL------NSIEQSSP- 57
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+L++ D MPGM GY++ ++I+++ L IP++++++ + PS + + L+ GA++F
Sbjct: 58 ----DLVLLDVMMPGMDGYEVTQRIRKNQQLPFIPILLITAYDQPS-VVQGLDTGADDFI 112
Query: 121 LKPVQL 126
KPV++
Sbjct: 113 RKPVEV 118
>gi|414590048|tpg|DAA40619.1| TPA: hypothetical protein ZEAMMB73_710468 [Zea mays]
Length = 596
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 15 DDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCMP 74
DDS R +I LL+ Y+V A G KA + L + ++L++T+ +P
Sbjct: 52 DDST--RHVISALLRKCGYRVAAASDGVKAWDIL---------KEKSFNIDLVLTEVELP 100
Query: 75 GMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKP 134
M+G+ LL I E + K+IPV++MSS + S + +C+ +GA +F +KP++ ++ L
Sbjct: 101 LMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGASDFLVKPLRKNELRNLWQ 160
Query: 135 HLMK 138
H+ +
Sbjct: 161 HVWR 164
>gi|189183991|ref|YP_001937776.1| response regulator PleD [Orientia tsutsugamushi str. Ikeda]
gi|189180762|dbj|BAG40542.1| putative response regulator protein [Orientia tsutsugamushi str.
Ikeda]
Length = 489
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 23/151 (15%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD +RKL+E L T Y V +G +A++ L + I++++++ D
Sbjct: 5 ILVVDDLEYNRKLLETKLLTEYYTVYTAANGQEAIKIL-----------EAIKIDVVLLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPVQ---- 125
MPGM G++L + IK + IPV+I+++ +I ++ + LE GA+EF KP++
Sbjct: 54 IVMPGMDGFELCKAIKSNQDTAHIPVIIITALSDIEDKV-KGLECGADEFLTKPIEDISL 112
Query: 126 LADVNKLKPHLMKGISKEIK----EPNNINN 152
A V L MK +S IK N INN
Sbjct: 113 FARVKSLVR--MKAVSNLIKLRSITYNQINN 141
>gi|281308386|gb|ADA58341.1| pseudo-response regulator 5a [Brassica rapa]
Length = 497
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R++I LL+ SY+V AV G KA E L E V+LI+ +
Sbjct: 59 LVEADDST--RQIISALLRKCSYRVAAVPDGLKAWEMLKGNPES---------VDLILAE 107
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++GY LL I E K+IPV++MS+ + + + +C+ +GA ++ +KP++ ++
Sbjct: 108 VDLPSISGYALLTLIMEHDVCKNIPVIMMSTHDSVNTVYKCMLKGAADYLVKPLRRNELR 167
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 168 NLWQHVWR 175
>gi|196234681|ref|ZP_03133495.1| histidine kinase [Chthoniobacter flavus Ellin428]
gi|196221254|gb|EDY15810.1| histidine kinase [Chthoniobacter flavus Ellin428]
Length = 682
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD ++R+++ R L+ + + V SG +AL+ L + + ++++ D
Sbjct: 168 MLIVDDESLNREILIRRLQREACRPVGVRSGPEALDLL-----------RREKFDVVMLD 216
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MPGM G D+L +K+ L+ +PV+++S+ R+ RC+E GAE++ KPV
Sbjct: 217 IQMPGMNGIDVLHALKQDPQLRHLPVIMLSALTDVDRVARCIELGAEDYLPKPV 270
>gi|251794919|ref|YP_003009650.1| signal transduction histidine kinase LytS [Paenibacillus sp. JDR-2]
gi|247542545|gb|ACS99563.1| signal transduction histidine kinase, LytS [Paenibacillus sp.
JDR-2]
Length = 1112
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ +L VDD + K+++ L +S Y V +G AL+ + +++L+
Sbjct: 770 EVKILLVDDDSSNIKVLQELFPSSRYHVFVAYNGEDALKLI---------KQHRGELSLV 820
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+ D MPG++GY++ R+I+E L +PV++++ N P+ I E GA +F +KP
Sbjct: 821 LLDVMMPGLSGYEVCRRIREENPLYQLPVLLLTVRNSPADIALGFEAGANDFLVKP 876
>gi|186477721|ref|YP_001859191.1| response regulator receiver protein [Burkholderia phymatum STM815]
gi|184194180|gb|ACC72145.1| response regulator receiver protein [Burkholderia phymatum STM815]
Length = 120
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 11/115 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+LA+DDS R+++ L + YQVT GN+ LE N+ + +L++T
Sbjct: 4 HILAIDDSAAMRQILAATLTGAGYQVTLAADGNEGLE-----------NALAMPFDLVLT 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MPG +G DL+ ++ + S +D P++++++E+ + GA + KP+
Sbjct: 53 DQHMPGRSGLDLIAALRGNPSYRDTPILVLTTESGEPFKAAARDAGATGWIEKPL 107
>gi|404495358|ref|YP_006719464.1| response receiver [Geobacter metallireducens GS-15]
gi|418065548|ref|ZP_12702920.1| response regulator receiver protein [Geobacter metallireducens
RCH3]
gi|78192977|gb|ABB30744.1| response receiver [Geobacter metallireducens GS-15]
gi|373561933|gb|EHP88155.1| response regulator receiver protein [Geobacter metallireducens
RCH3]
Length = 141
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L D+ R + + L+K++ ++ D+G +ALE+ E ++ ++ +L++ D
Sbjct: 12 ILIEDEPGHTRLITKNLMKSADVEILPFDTGRRALEYF------EGKTAEDLRQHLVVLD 65
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MPG+ G+++L+++K + + +PV++ ++ + P I RC EGA + +KP+
Sbjct: 66 INMPGIDGFEVLKRLKGNEATAAVPVIVFTTTDHPDEIRRCYHEGANLYLVKPM 119
>gi|218202508|gb|EEC84935.1| hypothetical protein OsI_32150 [Oryza sativa Indica Group]
Length = 623
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 15 DDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCMP 74
DDS R +I LL+ Y+V A G KA + L + ++L++T+ +P
Sbjct: 51 DDST--RHIICALLRKCGYRVAAASDGVKAWDIL---------KEKSFNIDLVLTEVELP 99
Query: 75 GMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKP 134
M+G+ LL I E + K+IPV++MSS + S + +C+ +GA +F +KP++ ++ L
Sbjct: 100 LMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQ 159
Query: 135 HLMK 138
H+ +
Sbjct: 160 HVWR 163
>gi|452851441|ref|YP_007493125.1| Response regulator receiver protein [Desulfovibrio piezophilus]
gi|451895095|emb|CCH47974.1| Response regulator receiver protein [Desulfovibrio piezophilus]
Length = 122
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS R L+ ++K ++VT+ + G LE L +V+LI++
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTSAEDGLDGLEKL----------YSATEVDLIVS 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G ++ ++E + +DIP+V++S+E I L GA + +KP Q
Sbjct: 54 DVNMPRMDGLTFIKTVREQEAYRDIPIVVLSTEGQDKDIQTGLTVGANLYMVKPAQ 109
>gi|218194915|gb|EEC77342.1| hypothetical protein OsI_16022 [Oryza sativa Indica Group]
Length = 65
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 39/47 (82%)
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
+++++TDYCMP MTGY+LL+ IK + LK IPV++MSSEN P RI+R
Sbjct: 19 IDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISR 65
>gi|410464253|ref|ZP_11317706.1| response regulator (CheY-like domain and winged-helix DNA-binding
domain containing protein) [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409982639|gb|EKO39075.1| response regulator (CheY-like domain and winged-helix DNA-binding
domain containing protein) [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 122
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS R L+ +++ ++VTA + G LE L T+ QV +LIIT
Sbjct: 4 HILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKL-------YTDQQV---DLIIT 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G ++ ++E +DIP+V++S+E I+ L GA + +KP Q
Sbjct: 54 DINMPRMDGITFIKTVREQDLYRDIPIVVLSTEGEERDIHVGLSIGANLYMVKPAQ 109
>gi|424043135|ref|ZP_17780775.1| his Kinase A domain protein [Vibrio cholerae HENC-03]
gi|408889439|gb|EKM27856.1| his Kinase A domain protein [Vibrio cholerae HENC-03]
Length = 1200
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
Q VL VDD I+R L +R + SG++A+E L + Q + ++LI
Sbjct: 966 QGRVLVVDDDAINRLLFKRQFEKLGVCCQLAASGSEAIELL----KQAQHDDAFAPISLI 1021
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
I+D MP M GY L +K+K S+ +PVV ++EN + I + + G E KP L
Sbjct: 1022 ISDCHMPDMDGYQLTQKLKASSEFASLPVVGCTAENSRNVIEKAEQNGMESVLFKPYNLD 1081
Query: 128 DVNKL-KPHLMKGISKEIK 145
D+ L + +L S E +
Sbjct: 1082 DLKALCEQYLAMSFSSETQ 1100
>gi|408419249|ref|YP_006760663.1| chemotaxis protein Y, response regulator CheY [Desulfobacula
toluolica Tol2]
gi|405106462|emb|CCK79959.1| CheY: chemotaxis protein Y, response regulator [Desulfobacula
toluolica Tol2]
Length = 141
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ +L VDDS+ R +I+R K + Y + + L L+ D ++++
Sbjct: 2 SYSILIVDDSLPMRSVIKRTFKAAGYVNSEFHEAANGKDALELMKND--------WIDIV 53
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITDY MP M G + ++ IK+ LKDIPVV++S+E ++I ++ GA + KP
Sbjct: 54 ITDYNMPVMNGMEFIKTIKQDDLLKDIPVVVISTEGNETKIKEFMDCGAAGYITKPFTPE 113
Query: 128 DVNKLKPHLMKGIS 141
+ L ++ IS
Sbjct: 114 TIRDLLTDILGEIS 127
>gi|392308986|ref|ZP_10271520.1| two-component response regulator [Pseudoalteromonas citrea NCIMB
1889]
Length = 300
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 89/168 (52%), Gaps = 26/168 (15%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD ++R +++ L + YQ++ +S +AL FL D + V+LII+D
Sbjct: 7 ILIVDDDPLNRVVLDNTL-SEEYQISQCESAEQALTFLA----DNK-------VDLIISD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ-LADV 129
MPGM+GYDLL ++K IPV+I+S+ N + + L+ GA ++ KP L
Sbjct: 55 IRMPGMSGYDLLERLKAKQHTYAIPVIIISASNSYNDEAKGLQMGAMDYITKPFSPLIVK 114
Query: 130 NKLKPHLMKGISKEIKEPNNINNKRK---GLEEIDSADRTRTRLNDTI 174
++K HL IK+ N++ K GL EI + R L+DT+
Sbjct: 115 ARVKNHL------AIKQKNDLLEKLASIDGLTEIPN----RRLLDDTL 152
>gi|319789819|ref|YP_004151452.1| response regulator receiver modulated CheW protein [Thermovibrio
ammonificans HB-1]
gi|317114321|gb|ADU96811.1| response regulator receiver modulated CheW protein [Thermovibrio
ammonificans HB-1]
Length = 321
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV 61
G+ +F +L +DDS + RK+I R+L+ + V +G +AL+ L E+ + +
Sbjct: 182 GIQKKGRFKILILDDSPVARKIIRRILEADGHTVFEAQNGIEALQILHKWLEEAKATGKD 241
Query: 62 I--QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEF 119
I V LII+D MPGM G RK+KE L IP++I +S + + +++ GA+
Sbjct: 242 ITDYVQLIISDIEMPGMDGLTFTRKVKEDPELSKIPIIINTSLSDRANVDKSRFVGADAH 301
Query: 120 FLK 122
+K
Sbjct: 302 LVK 304
>gi|374301471|ref|YP_005053110.1| response regulator receiver protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332554407|gb|EGJ51451.1| response regulator receiver protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 123
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS R L+ ++K ++VT + G LE L +NS ++LII+
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL-------YSNS----IDLIIS 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G+ ++ ++E + KD P+V++S+E I + + GA + +KP Q
Sbjct: 53 DVNMPRMDGFTFIKIVREQEAYKDTPIVVLSTEGQEKDIQQGMNLGANLYLVKPAQ 108
>gi|153869318|ref|ZP_01998958.1| response regulator receiver [Beggiatoa sp. PS]
gi|152074148|gb|EDN71034.1| response regulator receiver [Beggiatoa sp. PS]
Length = 137
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 11/132 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L +DD II R IE LL+++ + ++G + +E ++ + +LI+ D
Sbjct: 7 ILVIDDEIISRYTIEALLESNDCTLVFAENGKQGIE-----------KAETMTPDLILLD 55
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ + R ++ KD+P+V+++ + P +RCL GA + KP D+
Sbjct: 56 VMMPDMNGFQVCRLLRADLRFKDVPIVMVTGWDDPIARSRCLSIGATDIICKPFNRKDLR 115
Query: 131 KLKPHLMKGISK 142
+ L+KG +K
Sbjct: 116 AIISKLLKGNAK 127
>gi|312283377|dbj|BAJ34554.1| unnamed protein product [Thellungiella halophila]
Length = 728
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ SY+V V +G +A + L LN +++++T+
Sbjct: 86 VLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNN---------HIDIVLTE 136
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI S ++IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 137 VVMPYLSGISLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELK 196
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 197 ILWQHVWR 204
>gi|224110806|ref|XP_002315642.1| type-b response regulator [Populus trichocarpa]
gi|222864682|gb|EEF01813.1| type-b response regulator [Populus trichocarpa]
Length = 250
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 21/162 (12%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+ VL VDD K++E++LK SY+VT AL LL E + ++
Sbjct: 8 AGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDAL---NLLRERKGG------YDI 58
Query: 67 IITDYCMPGMTGYDLLRKIKESASLK-DIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
+I+D MP M G+ LL E L+ D+PV++MS + SR+ + ++ GA ++ LKP++
Sbjct: 59 VISDVYMPDMDGFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIR 114
Query: 126 LADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTR 167
+ ++ + H+ + K+I E +I LE I+S TR
Sbjct: 115 MKELRNIWQHVFR---KKIHEVRDIEI----LEGIESFQMTR 149
>gi|297796967|ref|XP_002866368.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
gi|297312203|gb|EFH42627.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
Length = 498
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LLK SY+V AV + LE +L EDE++ ++L++T+
Sbjct: 68 VLLVENDDSTRHIVTALLKNCSYEVNAV---SDVLEAWRIL-EDEKSC-----IDLVLTE 118
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P +G LL KI +LK+IPV++MSS + + +CL GA +F +KP++ ++
Sbjct: 119 VVLPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELK 178
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 179 NLWQHVWR 186
>gi|345871972|ref|ZP_08823913.1| response regulator receiver modulated CheW protein [Thiorhodococcus
drewsii AZ1]
gi|343919783|gb|EGV30526.1| response regulator receiver modulated CheW protein [Thiorhodococcus
drewsii AZ1]
Length = 308
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS++ RK +ER + ++ G ALEFL L ++ ++ + ++ITD
Sbjct: 182 ILIVDDSLVARKQVERAIVELGFRTETRSDGRAALEFLEELAAEDAVDTSI---EMVITD 238
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
MP M GY L RKI+E++ LK + V++ SS + ++ GA++F K
Sbjct: 239 IEMPRMDGYTLTRKIRENSKLKHLRVILHSSLSGQFNVDMVKRAGADDFLAK 290
>gi|317130677|ref|YP_004096959.1| integral membrane sensor hybrid histidine kinase [Bacillus
cellulosilyticus DSM 2522]
gi|315475625|gb|ADU32228.1| integral membrane sensor hybrid histidine kinase [Bacillus
cellulosilyticus DSM 2522]
Length = 1015
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 71/119 (59%), Gaps = 10/119 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
V+ DD+ + K++ LK Y + AVD+GN L+ L +E + V+L++ D
Sbjct: 681 VIIADDNHSNIKVLLETLKREGYFIIAVDNGNDVLKQL-----EEHPD-----VDLVLLD 730
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MPGM+GY++ +KI+E+ SL ++PV+++++ + + + GA +F KP+ +A++
Sbjct: 731 IMMPGMSGYEVCQKIRETYSLTELPVLMLTAAFLADDMVAAFQSGANDFLHKPIDIAEL 789
>gi|456359110|dbj|BAM93384.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 33 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 83
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS ++ + CL GA +F KP++ ++
Sbjct: 84 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDLMGTVLSCLSNGAADFLAKPIRKNEL 143
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 144 KNLWAHVWR 152
>gi|226226746|ref|YP_002760852.1| two-component hybrid sensor and regulator [Gemmatimonas aurantiaca
T-27]
gi|226089937|dbj|BAH38382.1| two-component hybrid sensor and regulator [Gemmatimonas aurantiaca
T-27]
Length = 862
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+LAV+DS +++ LL+++ ++V +G ALE L S + +++++
Sbjct: 4 HILAVEDSPTQAEILRHLLESAGHEVAVASNGTAALELLA---------STRRRFDVVVS 54
Query: 70 DYCMPG-MTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D MPG + GY+L R+IK S + PVV+++S P I + LE GA+ FF KP
Sbjct: 55 DIVMPGAVDGYELCRRIKASPHYR-TPVVLLTSLADPMDIIKGLECGADNFFTKP 108
>gi|329896811|ref|ZP_08271727.1| Adenylate cyclase [gamma proteobacterium IMCC3088]
gi|328921566|gb|EGG28946.1| Adenylate cyclase [gamma proteobacterium IMCC3088]
Length = 452
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD +R ++ RLL + V DSG ALE Q ++Q I V ++ D
Sbjct: 101 ILVVDDQNDNRAVLNRLLSRVGHTVYTADSGEAALE---------QLSTQAIDV--VLLD 149
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MPGM G L KIK L+ IPV+++S + C+ GA+++ KP
Sbjct: 150 LSMPGMGGKTALTKIKADPKLRSIPVIVISGHQELDSVVECITAGADDYLFKP 202
>gi|153867938|ref|ZP_01998111.1| two component system response regulator [Beggiatoa sp. SS]
gi|152144742|gb|EDN71889.1| two component system response regulator [Beggiatoa sp. SS]
Length = 258
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 76/135 (56%), Gaps = 11/135 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+V ++ +LAVDD ++ +++ LL +Y V V G + E LL + E+ +
Sbjct: 18 LVATGRYTILAVDDEPVNLQVVTNLLSLENYTVKTVMGGAETFE---LLEQGEKPD---- 70
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
LI+ D MP MTGY++ +K++E S ++P+++++++N S + L GA ++ K
Sbjct: 71 ---LILLDIMMPKMTGYEVCQKLREQYSATELPIMLLTAKNQVSDLVEGLNVGANDYITK 127
Query: 123 PVQLAD-VNKLKPHL 136
PV + + ++K HL
Sbjct: 128 PVSKNELLARIKTHL 142
>gi|156977382|ref|YP_001448288.1| histidine kinase [Vibrio harveyi ATCC BAA-1116]
gi|156528976|gb|ABU74061.1| hypothetical protein VIBHAR_06169 [Vibrio harveyi ATCC BAA-1116]
Length = 1225
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD I+R L +R + SG +A+E L E Q ++ + NL+ITD
Sbjct: 994 VLVVDDDAINRLLFKRQFEKLGVNCQLAASGVEAIEAL----EQAQNDNVLAPFNLVITD 1049
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY L + +K + L IPVV ++EN + I + + G E KP L+++
Sbjct: 1050 CHMPDMDGYQLTQALKANKVLASIPVVTCTAENSRNVIEKAEQSGIETVLFKPYTLSELQ 1109
Query: 131 KL-KPHLMKGISKEIKE 146
L + +L + I+ E +E
Sbjct: 1110 ALCEQYLSRVINAESQE 1126
>gi|148266181|ref|YP_001232887.1| CheA signal transduction histidine kinase [Geobacter uraniireducens
Rf4]
gi|146399681|gb|ABQ28314.1| CheA signal transduction histidine kinase [Geobacter uraniireducens
Rf4]
Length = 686
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
T ++ H+L VDDSI R + +L T Y+V SG ALE +
Sbjct: 562 ATRAKGHILVVDDSITTRTMERSILVTHGYEVEIAISGEDALE-----------KVAGTR 610
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+L+I+D MPG++G++L R+++ +D+PV+I+SS + +E GA+ + +K
Sbjct: 611 FDLVISDVMMPGISGFELTRRLRTMEDYRDVPVIIVSSLARDEDKRQAMESGAQAYIVK 669
>gi|297824763|ref|XP_002880264.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
gi|297326103|gb|EFH56523.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 76/133 (57%), Gaps = 9/133 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL+ Y+V AV G A E L E++++ ++LI+
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVL-----KEKSHN----IDLIL 87
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++G+ LL + E + K+IPV++MSS++ + +C+ GA ++ +KP++ +
Sbjct: 88 TELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNE 147
Query: 129 VNKLKPHLMKGIS 141
+ L H+ + ++
Sbjct: 148 LKNLWQHVWRRLT 160
>gi|315644147|ref|ZP_07897317.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
gi|315280522|gb|EFU43811.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
Length = 1048
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 67/119 (56%), Gaps = 11/119 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD ++ +++E +L Y VT SG E L +L+ E +L+I+D
Sbjct: 722 LLIVDDDPVNLQVLEAILPPDEYDVTMATSGK---EVLAVLDAQEW--------DLVISD 770
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MP M+GY+L R+I+E +L ++PV+++++ + P I GA ++ KPV+ ++
Sbjct: 771 IMMPQMSGYELTRRIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVEAIEI 829
>gi|297810367|ref|XP_002873067.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
gi|297318904|gb|EFH49326.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
Length = 733
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ SY+V +G +A + L LN +++++T+
Sbjct: 87 VLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNN---------HIDIVLTE 137
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI S ++IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 138 VIMPYLSGISLLSKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELK 197
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 198 ILWQHVWR 205
>gi|430003927|emb|CCF19718.1| Response regulator receiver protein [Rhizobium sp.]
Length = 278
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ +SG KALE L ++N +
Sbjct: 136 FLTNHRHHVLIVDDSPTARALLTSRLKRYNFRVSTAESGAKALEIL-------KSNPDI- 187
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
L++TDY MP + G++L R+I+ + ++ ++ +SS + R L+ G +F L+
Sbjct: 188 --GLVVTDYNMPDIDGFELTRRIRSARGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 245
Query: 123 P 123
P
Sbjct: 246 P 246
>gi|410665979|ref|YP_006918350.1| response regulator protein [Simiduia agarivorans SA1 = DSM 21679]
gi|409028336|gb|AFV00621.1| response regulator protein [Simiduia agarivorans SA1 = DSM 21679]
Length = 422
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+V++ VL VDDS + R I LL+ +QV A +G +A++ L L N+
Sbjct: 122 LVSNQSISVLVVDDSDVSRTYISELLRRQGFQVLAAQNGVEAIKLL-LAND--------- 171
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ LIITDY MP M G +L++ I+ D+ ++ +S ++ PS + ++ GA +F K
Sbjct: 172 AIRLIITDYHMPKMDGVELVKNIRHKYEKSDLVIIGLSGQDQPSLSAKFIKNGANDFLNK 231
Query: 123 P 123
P
Sbjct: 232 P 232
>gi|381151669|ref|ZP_09863538.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Methylomicrobium album BG8]
gi|380883641|gb|EIC29518.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Methylomicrobium album BG8]
Length = 129
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSY-QVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
Q +L VDD++ R + + +L+ + + V V G +AL+ + + I+VNL
Sbjct: 9 QNKILVVDDALSMRSMTKAVLRDAGFAHVFDVPDGEEALKLM-----------KRIKVNL 57
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
++ D+ MPGM+G DL + +K L P ++++S + S++ +E G + +KP +
Sbjct: 58 VVCDWNMPGMSGLDLFKAVKAEPKLASTPFIMLTSSSEGSKVKEAIEAGITAYIIKPYKP 117
Query: 127 ADVNK 131
AD+ K
Sbjct: 118 ADLIK 122
>gi|379011725|ref|YP_005269537.1| chemotaxis protein response regulator CheY2 [Acetobacterium woodii
DSM 1030]
gi|375302514|gb|AFA48648.1| chemotaxis protein response regulator CheY2 [Acetobacterium woodii
DSM 1030]
Length = 124
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L +DDS + RK+I + ++ +S AL+ LL E+ + LI D
Sbjct: 3 MLTIDDSAVVRKIISAAVVVLGHECLEAESAQDALD---LLKGPEK-------IELIFLD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+ MPGM G + L+ IK+S K IPVV++++EN+P + ++ G ++ KP + ++
Sbjct: 53 WNMPGMNGLEFLKTIKKSDQFKHIPVVMVTTENMPESVIEAVKAGVTQYITKPFSIEELM 112
Query: 131 K 131
K
Sbjct: 113 K 113
>gi|118638624|gb|ABL09468.1| pseudo-response regulator [Triticum aestivum]
gi|383215296|gb|AFG73161.1| pseudo-response regulator [Triticum aestivum]
gi|383215297|gb|AFG73162.1| pseudo-response regulator [Triticum aestivum]
gi|383215298|gb|AFG73163.1| pseudo-response regulator [Triticum aestivum]
Length = 664
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 37 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 87
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS N + CL GA +F KP++ ++
Sbjct: 88 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNEL 147
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 148 KNLWAHVWR 156
>gi|197118763|ref|YP_002139190.1| chemotaxis sensor histidine kinase CheA/response receiver
[Geobacter bemidjiensis Bem]
gi|197088123|gb|ACH39394.1| sensor histidine kinase CheA and response receiver CheY associated
with MCPs of class 40H [Geobacter bemidjiensis Bem]
Length = 679
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
+ +F VL VDDSI R + + +L T Y V SG AL+ +ED +
Sbjct: 557 ERRFKVLVVDDSITTRTMEQSILLTQGYDVVTAVSGEDALQKCA--DED---------FD 605
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
LII+D MPG+ G++L R ++ES ++IP++I+SS + + L+ GA+ + +K
Sbjct: 606 LIISDVEMPGINGFELTRALRESERYREIPIIIVSSLSRDEDKRQALQSGAQAYIVK 662
>gi|418522790|ref|ZP_13088821.1| RpfC protein [Xanthomonas axonopodis pv. malvacearum str. GSPB2388]
gi|410700780|gb|EKQ59322.1| RpfC protein [Xanthomonas axonopodis pv. malvacearum str. GSPB2388]
Length = 721
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 13/116 (11%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD + +R +++RLL+ + ++VT VD G L+ L + D I D
Sbjct: 457 ILVADDHLANRLVLQRLLQKAGHRVTCVDGGEAVLDALAETDYDAA-----------IVD 505
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MPG++G D+L++++ ++ PVV++S++ P I C + GA F KPV
Sbjct: 506 LHMPGVSGLDMLKQLRVMQAGGKPGTPVVVLSADVTPESIRSCEQAGAYAFLAKPV 561
>gi|374365154|ref|ZP_09623247.1| chemotaxis protein CheY [Cupriavidus basilensis OR16]
gi|373103289|gb|EHP44317.1| chemotaxis protein CheY [Cupriavidus basilensis OR16]
Length = 320
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ--VNLI 67
+LA DDS R LIE+ LK V +G +A + L + + N + +Q + L+
Sbjct: 190 RILAADDSAFARSLIEQGLKAMGVPVLMTKTGQEAWQQLSEIADHAAANGRTVQDEIALV 249
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+TD MP M G+ L RKIK A K IPVVI SS + + + + GA+ + K
Sbjct: 250 LTDLEMPEMDGFTLTRKIKADARFKSIPVVIHSSLSGTASEDHVRKVGADAYVSK 304
>gi|418517900|ref|ZP_13084056.1| RpfC protein [Xanthomonas axonopodis pv. malvacearum str. GSPB1386]
gi|410705371|gb|EKQ63845.1| RpfC protein [Xanthomonas axonopodis pv. malvacearum str. GSPB1386]
Length = 721
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 13/116 (11%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD + +R +++RLL+ + ++VT VD G L+ L + D I D
Sbjct: 457 ILVADDHLANRLVLQRLLQKAGHRVTCVDGGEAVLDALAETDYDAA-----------IVD 505
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MPG++G D+L++++ ++ PVV++S++ P I C + GA F KPV
Sbjct: 506 LHMPGVSGLDMLKQLRVMQAGGKPGTPVVVLSADVTPESIRSCEQAGAYAFLAKPV 561
>gi|356504197|ref|XP_003520885.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 703
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL SY+V A G KA E L ++ ++LI+
Sbjct: 35 LRVLLVEADDSTRQIISALLHKCSYKVVAFCDGLKAWETL---------KNKPSDIDLIL 85
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++G+ LL I E K+IPV++MSS + S + +C+ +GA +F +KPV+ +
Sbjct: 86 TEVDLPSISGFSLLTLIMEHDICKNIPVIMMSSHDSVSMVLKCMLKGAADFLIKPVRRNE 145
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 146 LRNLWQHVWR 155
>gi|294140421|ref|YP_003556399.1| response regulator [Shewanella violacea DSS12]
gi|293326890|dbj|BAJ01621.1| response regulator [Shewanella violacea DSS12]
Length = 413
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 10/113 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL DDS++ RK + LL+ YQV D GN A + L N+ + V L+ITD
Sbjct: 124 VLVADDSMVSRKFVRSLLEQHLYQVIEADDGNSAWDILQ--NQPD--------VQLLITD 173
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
Y MPG+ G+ L+ K++E S +++ ++ +SS++ S R ++ GA +F KP
Sbjct: 174 YNMPGLDGFGLILKVREKFSREELAIIGLSSDSDESLSARFIKNGANDFLQKP 226
>gi|255539557|ref|XP_002510843.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223549958|gb|EEF51445.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 754
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 55/159 (34%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L VDD ++ +LKT S QV V + AL L S +L+IT
Sbjct: 22 QILIVDDDAPTLGIVSSMLKTCSLQVVTVKNPLDALSSL---------QSSDGAFDLVIT 72
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MPGM G L ++I E IPVVIMSS+ S I LE GA + +KPV L D+
Sbjct: 73 DLHMPGMNGIQLQKQIDEEFK---IPVVIMSSDGKRSAILESLESGAVYYMVKPVNLRDL 129
Query: 130 NKLKPHLMKGIS-KEI---KEPNNINNKRKGLEEIDSAD 164
+ + M KE+ +EP N + + E DS +
Sbjct: 130 KNVWQYAMASKKGKEVVVAEEPENNDGEASASTEKDSCE 168
>gi|257487365|ref|ZP_05641406.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|422679689|ref|ZP_16737962.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|331009036|gb|EGH89092.1| sensory box protein/response regulator [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
Length = 705
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T S +L +DD + R L+E LL+ Y+ +SG L + L D
Sbjct: 1 MTQSAATILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAPD--------- 51
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
LI+ D MPGM GY++ ++K S S +IP++++S+ + S LE GAEE+ KP
Sbjct: 52 --LILLDIMMPGMDGYEVASQLKASKSTANIPIIMLSALDEQSARLSGLEAGAEEYLNKP 109
Query: 124 VQLADV 129
V A++
Sbjct: 110 VDSAEL 115
>gi|416025402|ref|ZP_11569136.1| sensory box protein/response regulator [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320329810|gb|EFW85798.1| sensory box protein/response regulator [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 705
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T S +L +DD + R L+E LL+ Y+ +SG L + L D
Sbjct: 1 MTQSAATILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAPD--------- 51
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
LI+ D MPGM GY++ ++K S S +IP++++S+ + S LE GAEE+ KP
Sbjct: 52 --LILLDIMMPGMDGYEVASQLKASKSTANIPIIMLSALDEQSARLSGLEAGAEEYLNKP 109
Query: 124 VQLADV 129
V A++
Sbjct: 110 VDSAEL 115
>gi|298159660|gb|EFI00703.1| Sensory box/GGDEF family protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 705
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T S +L +DD + R L+E LL+ Y+ +SG L + L D
Sbjct: 1 MTQSAATILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAPD--------- 51
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
LI+ D MPGM GY++ ++K S S +IP++++S+ + S LE GAEE+ KP
Sbjct: 52 --LILLDIMMPGMDGYEVASQLKASKSTANIPIIMLSALDEQSARLSGLEAGAEEYLNKP 109
Query: 124 VQLADV 129
V A++
Sbjct: 110 VDSAEL 115
>gi|289623551|ref|ZP_06456505.1| sensory box protein/response regulator [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289649158|ref|ZP_06480501.1| sensory box protein/response regulator [Pseudomonas syringae pv.
aesculi str. 2250]
gi|422583017|ref|ZP_16658147.1| sensory box protein/response regulator [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330867854|gb|EGH02563.1| sensory box protein/response regulator [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 705
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T S +L +DD + R L+E LL+ Y+ +SG L + L D
Sbjct: 1 MTQSAATILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAPD--------- 51
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
LI+ D MPGM GY++ ++K S S +IP++++S+ + S LE GAEE+ KP
Sbjct: 52 --LILLDIMMPGMDGYEVASQLKASKSTANIPIIMLSALDEQSARLSGLEAGAEEYLNKP 109
Query: 124 VQLADV 129
V A++
Sbjct: 110 VDSAEL 115
>gi|159154677|gb|ABW93666.1| pseudo-response regulator [Triticum turgidum]
gi|159154679|gb|ABW93667.1| pseudo-response regulator [Triticum turgidum]
gi|159154681|gb|ABW93668.1| pseudo-response regulator [Triticum turgidum]
gi|379025480|dbj|BAL63517.1| pseudo-response regulator [Triticum turanicum]
gi|379025484|dbj|BAL63519.1| pseudo-response regulator [Triticum turanicum]
gi|379025486|dbj|BAL63520.1| pseudo-response regulator [Triticum turanicum]
gi|379025566|dbj|BAL63560.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025644|dbj|BAL63599.1| pseudo-response regulator [Triticum durum]
gi|379025646|dbj|BAL63600.1| pseudo-response regulator [Triticum durum]
gi|379025648|dbj|BAL63601.1| pseudo-response regulator [Triticum durum]
gi|379025650|dbj|BAL63602.1| pseudo-response regulator [Triticum durum]
gi|379025652|dbj|BAL63603.1| pseudo-response regulator [Triticum durum]
gi|379025654|dbj|BAL63604.1| pseudo-response regulator [Triticum durum]
gi|379025656|dbj|BAL63605.1| pseudo-response regulator [Triticum durum]
gi|379025658|dbj|BAL63606.1| pseudo-response regulator [Triticum durum]
gi|379025660|dbj|BAL63607.1| pseudo-response regulator [Triticum durum]
gi|379025662|dbj|BAL63608.1| pseudo-response regulator [Triticum durum]
gi|379025664|dbj|BAL63609.1| pseudo-response regulator [Triticum durum]
gi|379025666|dbj|BAL63610.1| pseudo-response regulator [Triticum durum]
gi|379025668|dbj|BAL63611.1| pseudo-response regulator [Triticum durum]
gi|379025670|dbj|BAL63612.1| pseudo-response regulator [Triticum durum]
gi|379025672|dbj|BAL63613.1| pseudo-response regulator [Triticum durum]
gi|379025674|dbj|BAL63614.1| pseudo-response regulator [Triticum durum]
gi|379025676|dbj|BAL63615.1| pseudo-response regulator [Triticum durum]
gi|379025678|dbj|BAL63616.1| pseudo-response regulator [Triticum durum]
gi|379025680|dbj|BAL63617.1| pseudo-response regulator [Triticum durum]
gi|379025684|dbj|BAL63619.1| pseudo-response regulator [Triticum durum]
gi|379025686|dbj|BAL63620.1| pseudo-response regulator [Triticum durum]
gi|379025688|dbj|BAL63621.1| pseudo-response regulator [Triticum durum]
gi|379025690|dbj|BAL63622.1| pseudo-response regulator [Triticum durum]
gi|379025692|dbj|BAL63623.1| pseudo-response regulator [Triticum durum]
gi|379025694|dbj|BAL63624.1| pseudo-response regulator [Triticum durum]
gi|379025696|dbj|BAL63625.1| pseudo-response regulator [Triticum durum]
gi|379026082|dbj|BAL63818.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA EF KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|395763750|ref|ZP_10444419.1| response regulator receiver sensor signal transduction histidine
kinase [Janthinobacterium lividum PAMC 25724]
Length = 453
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 11/120 (9%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+ + +L V+DS + + RL+++ Y V +G AL + + +
Sbjct: 7 IKPGEIEILIVEDSPTQAERLRRLIQSLHYNVRVAANGQLALAAI-----------RERK 55
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+L+++D MP M GYDL R IK +L+DIPV++++S N P I R +E GA+ F KP
Sbjct: 56 PHLVLSDIVMPEMNGYDLCRAIKSDPTLRDIPVILVTSLNDPKDIIRGIECGADNFIRKP 115
>gi|281308396|gb|ADA58346.1| pseudo-response regulator 7b [Brassica rapa]
Length = 704
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ SY+V V +G +A + L LN +++++T+
Sbjct: 76 VLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNN---------HIDIVLTE 126
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI S ++IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 127 VVMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELK 186
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 187 ILWQHVWR 194
>gi|222086326|ref|YP_002544859.1| two-component response regulator protein [Agrobacterium radiobacter
K84]
gi|221723774|gb|ACM26930.1| two-component response regulator protein [Agrobacterium radiobacter
K84]
Length = 276
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ ++G KALE L N D
Sbjct: 136 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSVAENGAKALEILKA-NRD-------- 186
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L++TDY MP + G++L R+I+ S ++ ++ +SS R L+ G +F L+
Sbjct: 187 -IGLMVTDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSTNRLLSARFLKAGGNDFMLR 245
Query: 123 P 123
P
Sbjct: 246 P 246
>gi|428201053|ref|YP_007079642.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Pleurocapsa sp. PCC 7327]
gi|427978485|gb|AFY76085.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Pleurocapsa sp. PCC 7327]
Length = 121
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 11/129 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+DS +++I LLK S +VT V G +ALE + Q NL+I D
Sbjct: 4 VLVVEDSPTQQQIILDLLKNSGLKVTIVQDGVEALE-----------HVQKYHPNLVILD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY++ R++K KD+PV++ S++ +++GA+ + +KP Q ++
Sbjct: 53 IVMPRMNGYEVCRRLKSDPKTKDVPVILCSTKAEEFDRYWGMKQGADAYIVKPFQPVELL 112
Query: 131 KLKPHLMKG 139
LM+G
Sbjct: 113 GTIKQLMRG 121
>gi|71737704|ref|YP_273433.1| sensory box protein/response regulator [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558257|gb|AAZ37468.1| sensory box protein/response regulator [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 705
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T S +L +DD + R L+E LL+ Y+ +SG L + L D
Sbjct: 1 MTQSAATILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAPD--------- 51
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
LI+ D MPGM GY++ ++K S S +IP++++S+ + S LE GAEE+ KP
Sbjct: 52 --LILLDIMMPGMDGYEVASQLKASKSTANIPIIMLSALDEQSARLSGLEAGAEEYLNKP 109
Query: 124 VQLADV 129
V A++
Sbjct: 110 VDSAEL 115
>gi|91785659|ref|YP_560865.1| response regulator receiver domain-containing protein [Burkholderia
xenovorans LB400]
gi|187925786|ref|YP_001897428.1| response regulator receiver protein [Burkholderia phytofirmans
PsJN]
gi|385207616|ref|ZP_10034484.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Burkholderia sp. Ch1-1]
gi|91689613|gb|ABE32813.1| Response regulator receiver domain protein(CheY) [Burkholderia
xenovorans LB400]
gi|187716980|gb|ACD18204.1| response regulator receiver protein [Burkholderia phytofirmans
PsJN]
gi|385179954|gb|EIF29230.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Burkholderia sp. Ch1-1]
Length = 125
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+LA+DDS R+++ L T+ Y+VT GN+ LE N+ + +L++T
Sbjct: 4 HILAIDDSASMRQILAATLTTAGYEVTLAADGNEGLE-----------NALAMSFDLVLT 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MPG TG DL+ ++ + + + P++++++E+ GA + KP
Sbjct: 53 DQYMPGKTGLDLIAALRNNPAYQATPILVLTTESGEPFKEAARAAGATGWIEKP------ 106
Query: 130 NKLKPHLMKGISKEIKEPNN 149
L P ++ + + EP++
Sbjct: 107 --LDPDMLTELVAALAEPDH 124
>gi|374095508|sp|Q9LYP5.3|ARR21_ARATH RecName: Full=Putative two-component response regulator ARR21
Length = 613
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 13/122 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
V+ VDD + ++ R+L+ S Y+V AVD KAL L + Q ++LIITD
Sbjct: 18 VMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKI---------QRDNIDLIITD 68
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
Y MPGM G L ++I + ++PV++MSS+ ++ L GA F KP+ D+
Sbjct: 69 YYMPGMNGLQLKKQITQ--EFGNLPVLVMSSDT--NKEEESLSCGAMGFIPKPIHPTDLT 124
Query: 131 KL 132
K+
Sbjct: 125 KI 126
>gi|325910796|dbj|BAJ83828.1| circadian response regulator 2a [Physcomitrella patens subsp.
patens]
Length = 915
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 74/124 (59%), Gaps = 9/124 (7%)
Query: 15 DDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCMP 74
+D R ++ LL+ +Y+VT+V +G+ A GLL E+ NS +L++TD MP
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAW---GLL---EEANSNF---DLVLTDVVMP 239
Query: 75 GMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKP 134
++G +L K+ + + K +P+VIMSS + + + RCL +GA ++ +KPV+ ++ L
Sbjct: 240 CLSGVGILSKMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQ 299
Query: 135 HLMK 138
H+ +
Sbjct: 300 HVWR 303
>gi|297538825|ref|YP_003674594.1| response regulator receiver protein [Methylotenera versatilis 301]
gi|297258172|gb|ADI30017.1| response regulator receiver protein [Methylotenera versatilis 301]
Length = 121
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS DR + LL+T+ Y V +SG + L T +LI+ D
Sbjct: 6 VLVVDDSATDRFFLTELLETAGYTVIGAESGEECL-----------TKVAAKHPDLILCD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG+TG+ + R + + A+ IPV++ + ++ + + L+ GA+ KPV AD+
Sbjct: 55 VVMPGLTGFQVTRTLTKDAATAHIPVILCTGKSQATDLAWALKMGAKACVTKPVVSADLL 114
Query: 131 KL 132
L
Sbjct: 115 SL 116
>gi|18407171|ref|NP_566085.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|52783231|sp|Q8L500.2|APRR9_ARATH RecName: Full=Two-component response regulator-like APRR9; AltName:
Full=Pseudo-response regulator 9
gi|9247022|gb|AAF86253.1|AF272040_1 timing of CAB expression 1-like protein [Arabidopsis thaliana]
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9 [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein [Arabidopsis thaliana]
gi|62320652|dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|330255660|gb|AEC10754.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 468
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 76/133 (57%), Gaps = 9/133 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL+ Y+V AV G A E L E++++ ++LI+
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVL-----KEKSHN----IDLIL 87
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++G+ LL + E + K+IPV++MSS++ + +C+ GA ++ +KP++ +
Sbjct: 88 TELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNE 147
Query: 129 VNKLKPHLMKGIS 141
+ L H+ + ++
Sbjct: 148 LKNLWQHVWRRLT 160
>gi|78356619|ref|YP_388068.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
gi|78219024|gb|ABB38373.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
Length = 123
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS R L+ ++K ++VT + G LE L E+T V+LII+
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFRVTMAEDGLDGLE---KLYSAEET------VDLIIS 54
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G+ ++ ++E + +D+P+V++S+E I + GA + +KP Q
Sbjct: 55 DVNMPRMDGFTFIKTVREQDTYRDLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQ 110
>gi|392556611|ref|ZP_10303748.1| two-component response regulator [Pseudoalteromonas undina NCIMB
2128]
Length = 311
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 12/113 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD ++R ++ER L + ++V V SG +AL F+ + QV+LII D
Sbjct: 7 ILIVDDDALNRIILERTL-SDEHEVYLVASGEEALTFV-----------KHTQVDLIILD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MPGM GYD+L ++KES+ IP++ +S+ + + LE GA ++ +KP
Sbjct: 55 IMMPGMNGYDVLVELKESSLSHAIPIIFISANSSHEDEAKGLELGAMDYIVKP 107
>gi|319657108|gb|ADV58932.1| pseudo-response regulator 7-like protein [Beta vulgaris subsp.
vulgaris]
Length = 718
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ Y+V +G +A + L ED + +++L++T+
Sbjct: 86 VLLVENDDSTRHVVAALLRNCCYEVVEASNGLQAWKIL----EDIEN-----RIDLVLTE 136
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI S K++PVV+MSS + + +CL +GA +F +KP++ ++
Sbjct: 137 VVMPCVSGIALLFKIMSHKSRKNVPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELK 196
Query: 131 KLKPHLMK 138
L HL +
Sbjct: 197 NLWQHLWR 204
>gi|427706153|ref|YP_007048530.1| multi-sensor hybrid histidine kinase [Nostoc sp. PCC 7107]
gi|427358658|gb|AFY41380.1| multi-sensor hybrid histidine kinase [Nostoc sp. PCC 7107]
Length = 945
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKAL----EFLGLLNEDEQTNSQVIQVNL 66
+L VD+ + +R + LL+ S++V + +G AL EF Q +L
Sbjct: 731 ILIVDNVVENRSVFVSLLEAFSFEVAEIGNGQNALAKIVEF---------------QPDL 775
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
IIT CMP M GY++L +++S +L++I VV+ S+ + GA++F KPVQL
Sbjct: 776 IITGVCMPVMDGYEMLYHLRKSTALQNIKVVVSSASVFDDDKQKSFAAGADDFLSKPVQL 835
Query: 127 AD-VNKLKPHL 136
+ + L+ HL
Sbjct: 836 CELLETLQKHL 846
>gi|319657095|gb|ADV58926.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657099|gb|ADV58928.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657103|gb|ADV58930.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 70/128 (54%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R ++ LL+ SY+V V +G +A + L L+ Q++L++T+
Sbjct: 98 VLLVESDDSTRHIVSALLRNCSYEVVGVPNGIEAWKILEDLSN---------QIDLVLTE 148
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
G++G LL KI S ++ PV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 149 VVTSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELK 208
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 209 NLWQHVWR 216
>gi|332297564|ref|YP_004439486.1| response regulator receiver modulated metal dependent
phosphohydrolase [Treponema brennaborense DSM 12168]
gi|332180667|gb|AEE16355.1| response regulator receiver modulated metal dependent
phosphohydrolase [Treponema brennaborense DSM 12168]
Length = 338
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 68/127 (53%), Gaps = 10/127 (7%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T+ F +L DDS R+ + LL + +Y VTA SG +ALE +E
Sbjct: 1 MTEIPFKILCADDSTSIRQYLTGLLTSWNYDVTACASGTEALEAYRTYSE---------- 50
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
++++ D+ MPGMTG D+ R+I+ + +++++S++ I L GA+++ +KP
Sbjct: 51 YSVVLLDWIMPGMTGIDVCRQIRAADKQGYTYIIMLTSKDSTENIVEALNAGADDYLIKP 110
Query: 124 VQLADVN 130
A++
Sbjct: 111 FHPAELQ 117
>gi|422597764|ref|ZP_16672033.1| sensory box protein/response regulator [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|330988050|gb|EGH86153.1| sensory box protein/response regulator [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 705
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T S +L +DD + R L+E LL+ Y+ +SG L + L D
Sbjct: 1 MTQSAATILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAPD--------- 51
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
LI+ D MPGM GY++ ++K S S +IP++++S+ + S LE GAEE+ KP
Sbjct: 52 --LILLDIMMPGMDGYEVASQLKASKSTANIPIIMLSALDEHSARLSGLEAGAEEYLNKP 109
Query: 124 VQLADV 129
V A++
Sbjct: 110 VDSAEL 115
>gi|162149059|ref|YP_001603520.1| chemotaxis protein cheA [Gluconacetobacter diazotrophicus PAl 5]
gi|209545194|ref|YP_002277423.1| CheA signal transduction histidine kinase [Gluconacetobacter
diazotrophicus PAl 5]
gi|161787636|emb|CAP57232.1| putative chemotaxis protein cheA [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532871|gb|ACI52808.1| CheA signal transduction histidine kinase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 719
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDSI R L + +L+T Y V G +AL L + ++++I+TD
Sbjct: 601 VLVVDDSITTRTLQKTILQTHGYDVVLATDGVEALSML---------HRSSHRIDVIVTD 651
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
MP M G+ LL ++ L IPVV+M+S N + I R LE GA + K
Sbjct: 652 VEMPRMDGFALLDAVRSDPRLSSIPVVLMTSRNEEADIRRGLEGGARAYITK 703
>gi|411118667|ref|ZP_11391047.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
gi|410710530|gb|EKQ68037.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
Length = 351
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD +R L+ R L+ ++VT +G +AL GL+ + +LI+ D
Sbjct: 8 LLVVDDMEANRDLLTRRLQRQGHKVTVATNGREAL---GLIKQQS--------FDLILCD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M GY +L ++K L+ IPV+++S+ + + RC+E GAE++ KP
Sbjct: 57 IMMPEMDGYQVLEELKADPGLRHIPVIMISALDDMESVVRCIELGAEDYLFKP 109
>gi|398380279|ref|ZP_10538397.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. AP16]
gi|397721595|gb|EJK82143.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. AP16]
Length = 276
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ ++G KALE L N D
Sbjct: 136 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSVAENGAKALEILKA-NRD-------- 186
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L++TDY MP + G++L R+I+ S ++ ++ +SS R L+ G +F L+
Sbjct: 187 -IGLMVTDYNMPDIDGFELTRRIRASIGSHELRIIGVSSSTNRLLSARFLKAGGNDFMLR 245
Query: 123 P 123
P
Sbjct: 246 P 246
>gi|116624444|ref|YP_826600.1| response regulator receiver protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116227606|gb|ABJ86315.1| response regulator receiver protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 129
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 8/113 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS RK+++R+L+ + + A+ E L LL E +V+L++TD
Sbjct: 5 ILVVDDSAAIRKILQRVLRQTGMAIRAIHEAGDGQEALALLAEH--------RVDLVLTD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M G LL +K SA + PVV++++E +++ ++ GA + KP
Sbjct: 57 INMPKMDGLQLLASLKASAQWHNTPVVMITTEGGETKVAEAVKLGAAGYVRKP 109
>gi|329928021|ref|ZP_08282025.1| response regulator receiver domain protein [Paenibacillus sp. HGF5]
gi|328938125|gb|EGG34522.1| response regulator receiver domain protein [Paenibacillus sp. HGF5]
Length = 329
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 68/115 (59%), Gaps = 10/115 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD ++ +++ LL +Y + + +G +ALE + + Q I +L+ITD
Sbjct: 1 MLLVDDDPVNLQVLRSLLSAENYHLISAGNGAQALEHI--------RSGQGI--DLVITD 50
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
+ MPGM+G L +++ +L ++P++++++ ++P + L+ GA +F KPV+
Sbjct: 51 WMMPGMSGLQLCMTVRQQFTLFELPMLMLTARSLPDDVRTGLQAGANDFLRKPVE 105
>gi|239908619|ref|YP_002955361.1| response regulator [Desulfovibrio magneticus RS-1]
gi|239798486|dbj|BAH77475.1| putative response regulator [Desulfovibrio magneticus RS-1]
Length = 321
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
++L VDDS R L+ +LK + Y V + +G+ A E L LL+E Q + ++LI+
Sbjct: 1 MNILIVDDSDSSRLLLSTILKGAGY-VDPLCAGS-AGEALTLLDERCQ-GGEAPDIDLIL 57
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MP M G D R IK + L+DIP++I++ ++ + + R E GA +F KPV
Sbjct: 58 MDVVMPDMDGIDATRLIKADSRLRDIPIIIVTVKDEAASLERAFEAGAMDFLAKPV 113
>gi|383791531|ref|YP_005476105.1| signal transduction histidine kinase [Spirochaeta africana DSM
8902]
gi|383108065|gb|AFG38398.1| signal transduction histidine kinase [Spirochaeta africana DSM
8902]
Length = 479
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS R I ++L +Q +G A E L DE + +NL+I D
Sbjct: 124 ILVVDDSATMRANICKILHAYRFQTIDASNGRVAAELL-----DEHPD-----INLVIAD 173
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV------ 124
Y MP M GY+LL KI++ S D+P + +S + P R L+ GA +F KP
Sbjct: 174 YNMPQMDGYELLEKIRQKRSRADLPFIGVSGSDNPLLSARFLKLGANDFLAKPFSREELY 233
Query: 125 --------------QLADVNKLKPHLMKGISKEIKEPNN----------------INNKR 154
QL ++K K + + +++ P N +N++
Sbjct: 234 SRVLNCIEMLEYVEQLRQLDKQKNSFLGMAAHDLRNPINSISGFSGLLLDMSAERMNSQE 293
Query: 155 KGLEEI--DSADRTRTRLNDTIDINNDGLPDLEI 186
+ E+ SAD + +ND +DIN LEI
Sbjct: 294 QEFLELIHQSADEMLSIVNDLLDINAIQTGKLEI 327
>gi|297735376|emb|CBI17816.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 12/128 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD+I+ K++ LL+ Y+VTA KA E L +L E+ + +++ITD
Sbjct: 21 VLAVDDNIVCLKILVTLLEQCRYKVTAT---TKACEALEMLRENRE------NFDIVITD 71
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL+ I DIPV++ S + S + + + GA ++ LKPV++ ++
Sbjct: 72 VKMPDMDGFTLLKIIGLEM---DIPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIK 128
Query: 131 KLKPHLMK 138
+ H+++
Sbjct: 129 NIWQHVVR 136
>gi|443311023|ref|ZP_21040659.1| serine phosphatase RsbU, regulator of sigma subunit [Synechocystis
sp. PCC 7509]
gi|442778971|gb|ELR89228.1| serine phosphatase RsbU, regulator of sigma subunit [Synechocystis
sp. PCC 7509]
Length = 389
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 88/174 (50%), Gaps = 24/174 (13%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
F +L +DD I + + ++L+ YQ+ SG LE +Q +Q +LII
Sbjct: 2 FTILIIDDDGIVQLTLTKILEQQGYQIITATSGETGLE-----------QAQQLQPSLII 50
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
D+ MPGM G ++ R++K + +L ++++S + + + + L+ GA++F KP++
Sbjct: 51 CDWLMPGMDGIEVCRQVKATPNLSTTFFIVLTSLDSVADVVKGLDSGADDFITKPIE--- 107
Query: 129 VNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTIDINNDGLP 182
N+LK + G+ + ++ N+++ LE T L + +D + LP
Sbjct: 108 PNELKARVRAGLRWH-QMSRDLQNQKQLLE---------TELGEAVDYVQNILP 151
>gi|332664021|ref|YP_004446809.1| guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
gi|332332835|gb|AEE49936.1| adenylate/guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
Length = 1609
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 71/115 (61%), Gaps = 10/115 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDD ++++++++ L + Y++T V SG +AL+ L +D+ T ++L++
Sbjct: 1199 HILIVDDEVVNQQVLKNFLNKAIYRITQVLSGEEALQVL----DDDDT------IDLVLL 1248
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MP M+GY++ +KI+E ++PV++++++N S + L GA ++ KP
Sbjct: 1249 DVMMPRMSGYEVCQKIREKHLPSELPVLMITAKNQVSDLVTGLNTGANDYIAKPF 1303
>gi|159487203|ref|XP_001701623.1| chlamyopsin-5 sensory rhodopsin [Chlamydomonas reinhardtii]
gi|158280842|gb|EDP06598.1| chlamyopsin-5 sensory rhodopsin [Chlamydomonas reinhardtii]
Length = 1441
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 69/117 (58%), Gaps = 9/117 (7%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
++ VL+VDD +++ +I+ LL Y++ G +AL+ +L E+E+ ++
Sbjct: 718 AKVRVLSVDDDPVNQLVIQNLLAPVGYEILQAMDGQEALK---VLTEEERLP------DV 768
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
I+ D MPGM+GY++ RK++E L IPV+++S+++ I L G+ ++ +KP
Sbjct: 769 ILLDVMMPGMSGYEVCRKLREMYPLSCIPVIMISAKSKEEHIVEGLAAGSNDYVVKP 825
>gi|83647950|ref|YP_436385.1| signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
gi|83635993|gb|ABC31960.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396]
Length = 758
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 12/131 (9%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S VL V+D+ ++R L ++L+ +V ++G A++ +G + D L
Sbjct: 631 SGLRVLLVEDNTVNRNLARKMLEKCGCRVDFAENGEIAIQQMGSTHFD-----------L 679
Query: 67 IITDYCMPGMTGYDLLRKIKESA-SLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
I D MP M GY+ R+I+ES S IP+V +++ P +C++ G ++F KP++
Sbjct: 680 IFMDCWMPVMDGYETTRRIRESGQSFSHIPIVALTANAFPGEKEKCMQCGMDDFLTKPIR 739
Query: 126 LADVNKLKPHL 136
+++ + H
Sbjct: 740 FEELSAIVRHF 750
>gi|123486693|ref|XP_001324781.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
gi|121907669|gb|EAY12558.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
Length = 637
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
H+LAVDD + + + LK+ Y V+ +G +ALE L N +LI+
Sbjct: 12 LHILAVDDDAVQLHAVTKALKSLGYHVSNASNGQEALEVLKSGNT----------FDLIL 61
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+D MP M G L++ + + + IP+++MSS + + CL +GA+++ +KP+
Sbjct: 62 SDVMMPVMNGPQFLQETRADSRFEQIPIIMMSSNDQYEIVFDCLSKGADDYIIKPL 117
>gi|402571880|ref|YP_006621223.1| regulator of cell autolysis [Desulfosporosinus meridiei DSM 13257]
gi|402253077|gb|AFQ43352.1| putative regulator of cell autolysis [Desulfosporosinus meridiei
DSM 13257]
Length = 1031
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 10/118 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
QF +LAVDD + ++I RL Y V G AL+ L N + ++L
Sbjct: 701 GQFTLLAVDDDPANLQVIARLFANDPYNVLWATKGRDALDLLK--NRPD--------IDL 750
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
++ D MP M+GY++ R+I++ SL ++PV++++ + P I + GA +F +KP
Sbjct: 751 VLLDAMMPRMSGYEVCREIRQQFSLFELPVILLTVRHSPGDIAAGFKAGANDFIIKPF 808
>gi|218885879|ref|YP_002435200.1| response regulator receiver protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756833|gb|ACL07732.1| response regulator receiver protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 122
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS R L+ ++K ++VT + G LE L +S+ +V+LII+
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKL--------YSSE--KVDLIIS 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G+ ++ ++E + +D+P+V++S+E I + GA + +KP Q
Sbjct: 54 DVNMPRMDGFTFIKTVREQEAYRDLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQ 109
>gi|410699688|gb|AAQ16277.3| histidine kinase rhodopsin 1 [Chlamydomonas reinhardtii]
Length = 1396
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 69/117 (58%), Gaps = 9/117 (7%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
++ VL+VDD +++ +I+ LL Y++ G +AL+ +L E+E+ ++
Sbjct: 673 AKVRVLSVDDDPVNQLVIQNLLAPVGYEILQAMDGQEALK---VLTEEERLP------DV 723
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
I+ D MPGM+GY++ RK++E L IPV+++S+++ I L G+ ++ +KP
Sbjct: 724 ILLDVMMPGMSGYEVCRKLREMYPLSCIPVIMISAKSKEEHIVEGLAAGSNDYVVKP 780
>gi|334117422|ref|ZP_08491513.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
gi|333460531|gb|EGK89139.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
Length = 352
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD+ ++R L+ R L+ + VT + G +ALE +L D +L++ D
Sbjct: 8 VLVVDDNEVNRDLLARRLQRQGHVVTVAEDGLQALE---MLRSDP--------FDLVLLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M GY +L +K +L+ IPV+++S+ + I RC+E GAE++ KP
Sbjct: 57 IMMPQMNGYQVLESLKADENLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|153833234|ref|ZP_01985901.1| signal transduction histidine kinase [Vibrio harveyi HY01]
gi|148870505|gb|EDL69420.1| signal transduction histidine kinase [Vibrio harveyi HY01]
Length = 1200
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD I+R L +R + SG +A+E L E Q+++ + NL+ITD
Sbjct: 969 VLVVDDDAINRLLFKRQFEKLGVNCQLAASGLEAIEAL----EQAQSDNILAPFNLVITD 1024
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY L + +K + L IPVV ++EN + I + + G E KP L+++
Sbjct: 1025 CHMPDMDGYQLTQALKANKVLASIPVVTCTAENSRNVIEKAEQSGIETVLFKPYTLSELQ 1084
Query: 131 KL-KPHLMKGISKEIKE 146
L + +L + ++ E +E
Sbjct: 1085 ALCEQYLSRVVNAEPQE 1101
>gi|312283015|dbj|BAJ34373.1| unnamed protein product [Thellungiella halophila]
Length = 486
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 76/130 (58%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL+ Y+V AV G A E L E+++S ++LI+
Sbjct: 41 LRVLLVESDDSTRQIITALLRKCYYKVVAVSDGLAAWETL-----KEKSHS----IDLIL 91
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++G+ LL + E+ + K+IPV++MSS++ + + +C+ GA ++ +KP++ +
Sbjct: 92 TELDLPSISGFALLALVMENEACKNIPVIMMSSQDSITLVLKCMLRGAADYLIKPMRKNE 151
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 152 LKNLWQHVWR 161
>gi|224370519|ref|YP_002604683.1| putative chemotaxis response regulator receiver (CheY-like)
[Desulfobacterium autotrophicum HRM2]
gi|223693236|gb|ACN16519.1| putative chemotaxis response regulator receiver (CheY-like)
[Desulfobacterium autotrophicum HRM2]
Length = 141
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 14/139 (10%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSY---QVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
+ +L VDDS+ R +I+R L+ + Y ++ +G +ALE + NS V
Sbjct: 2 SYSILIVDDSLPMRSVIKRTLRAAGYGTSELLEAANGQEALELM--------KNSWV--- 50
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
++++TDY MP M G + ++ IK + KDIPVV++S+E S+I ++ GA + KP
Sbjct: 51 DIVMTDYNMPVMDGLEFIKTIKSNELSKDIPVVVISTEGNASKIKEFMDCGAAGYITKPF 110
Query: 125 QLADVNKLKPHLMKGISKE 143
+ L ++ +S E
Sbjct: 111 TAEVIRDLIVDILGEVSYE 129
>gi|121296536|gb|ABM53768.1| hybrid two-component regulatory protein [Stenotrophomonas
maltophilia]
Length = 702
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 13/116 (11%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL DD +R +++RLL+ + ++V V+ G L+ + + D + I D
Sbjct: 440 VLVADDHQANRLVLQRLLQKAGHKVVCVNGGEAVLDAMAESDYD-----------VAIVD 488
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MPGM+G D+L++++ ++ PV+++S++ P I +C + GA FF KPV
Sbjct: 489 LHMPGMSGLDMLKELRVLQAGGAPRTPVLVLSADVTPESIQQCTQAGAHTFFGKPV 544
>gi|418295881|ref|ZP_12907725.1| two component response regulator [Agrobacterium tumefaciens
CCNWGS0286]
gi|355539313|gb|EHH08551.1| two component response regulator [Agrobacterium tumefaciens
CCNWGS0286]
Length = 430
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
++++ F VL VDD R + +L+ +++V+ SG +ALE L SQ
Sbjct: 118 ILSNKLFSVLVVDDVRTARSGLVEILERQNFRVSEAHSGKQALEIL----------SQDP 167
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP M GY+L R+I++S S +D+ V+ +SS L+ GA +F +
Sbjct: 168 TIQLVITDYHMPDMDGYELTRRIRDSRSSEDLRVIGISSSTDRLLSASFLKAGASDFVYR 227
Query: 123 P 123
P
Sbjct: 228 P 228
>gi|319657093|gb|ADV58925.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657097|gb|ADV58927.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657101|gb|ADV58929.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 70/128 (54%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R ++ LL+ SY+V V +G +A + L L+ Q++L++T+
Sbjct: 98 VLLVESDDSTRHIVSALLRKCSYEVVGVPNGIEAWKILEDLSN---------QIDLVLTE 148
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
G++G LL KI S ++ PV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 149 VVTSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELK 208
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 209 NLWQHVWR 216
>gi|373458375|ref|ZP_09550142.1| CheA signal transduction histidine kinase [Caldithrix abyssi DSM
13497]
gi|371720039|gb|EHO41810.1| CheA signal transduction histidine kinase [Caldithrix abyssi DSM
13497]
Length = 747
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L V+DSI R L++ +L+++ ++V +G +A + L +QT +LII+
Sbjct: 627 QILVVEDSITSRVLLKNVLESAGFEVQTAINGQQAWQIL-----QKQT------FDLIIS 675
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
D MP M G +L RKIK +K IPV++++S S + LE GA +F+K
Sbjct: 676 DVQMPEMDGVELTRKIKAEQKMKSIPVILLTSLGSESDRKKGLEAGANAYFIK 728
>gi|428319185|ref|YP_007117067.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
gi|428242865|gb|AFZ08651.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
Length = 352
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD+ ++R L+ R L+ + VT + G +ALE +L D +L++ D
Sbjct: 8 VLVVDDNEVNRDLLARRLQRQGHVVTVAEDGLQALE---MLRRDP--------FDLVLLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M GY +L +K +L+ IPV+++S+ + I RC+E GAE++ KP
Sbjct: 57 IMMPQMNGYQVLESLKADENLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|356571269|ref|XP_003553801.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 695
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL+ Y+V A G KA E L ++ ++LI+
Sbjct: 33 LRVLLVEADDSTRQIIAALLRKCGYKVVAFCDGLKAWETL---------KNKAFDLDLIL 83
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++G+ LL I E K+IPV++MSS + S + +C+ +GA +F +KPV+ +
Sbjct: 84 TEVDLPSISGFSLLTLIMEHDICKNIPVIMMSSHDSVSMVFKCMLKGAADFLIKPVRKNE 143
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 144 LRNLWQHVWR 153
>gi|359462548|ref|ZP_09251111.1| two-component hybrid histidine kinase sensor and regulator
[Acaryochloris sp. CCMEE 5410]
Length = 359
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 12/121 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
++LAVDD + L++ +L+++ Y++ DSG AL Q Q +L+I
Sbjct: 14 YILAVDDLPDNLMLLKMMLESAGYRIELADSGPVAL-----------AQIQKAQPDLVIL 62
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MPGM+GY++ +KI+ L IP++++S+ S + + L+ GA++F KPV+L ++
Sbjct: 63 DVMMPGMSGYEVTQKIRNDPQLPYIPILLISAHE-RSSVVKGLDAGADDFIRKPVELEEL 121
Query: 130 N 130
Sbjct: 122 Q 122
>gi|323527737|ref|YP_004229890.1| response regulator receiver protein [Burkholderia sp. CCGE1001]
gi|323384739|gb|ADX56830.1| response regulator receiver protein [Burkholderia sp. CCGE1001]
Length = 125
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+LA+DDS R+++ L + Y+VT G + LE N+ ++ +L++T
Sbjct: 4 HILAIDDSASMRQILSATLTAAGYEVTLAADGAEGLE-----------NALAVRFDLVLT 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MPG TG DL+ +++ + + P++++++E+ + E GA + KP
Sbjct: 53 DQHMPGKTGLDLIAELRGNPAYAATPILVLTTESGDAFKAAAREAGATGWIEKP------ 106
Query: 130 NKLKPHLMKGISKEIKEPNN 149
L P L+ + + EP++
Sbjct: 107 --LDPDLLTELVAALAEPDH 124
>gi|237799880|ref|ZP_04588341.1| sensory box protein/response regulator, partial [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331022735|gb|EGI02792.1| sensory box protein/response regulator [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 464
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + R L+E LL+ Y+ +SG +AL + DE+ +LI+ D
Sbjct: 8 ILIVDDDVHVRDLLEVLLRNQHYETLTAESGEQALAMI-----DERAP------DLILLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MPGM GY++ ++K +IP++++S+ + S LE GAEE+ KPV+ A++
Sbjct: 57 IMMPGMDGYEVASQLKARKGTANIPIIMLSALDEQSARLSGLEAGAEEYLNKPVESAEL 115
>gi|163751842|ref|ZP_02159057.1| Response regulator containing a CheY-like receiver domain and a
GGDEF domain [Shewanella benthica KT99]
gi|161328258|gb|EDP99420.1| Response regulator containing a CheY-like receiver domain and a
GGDEF domain [Shewanella benthica KT99]
Length = 402
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL DDS++ RK + LL+ YQV D G+ A E L SQ + L+ITD
Sbjct: 113 VLIADDSVVSRKFVRSLLEQHLYQVIEADDGHSAWEIL---------QSQP-DIQLLITD 162
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
Y MPG+ G+ L+ K++E S +++ ++ +SS++ S R ++ GA +F KP
Sbjct: 163 YNMPGLDGFGLILKVREKFSREELAIIGLSSDSDESLSARFIKNGANDFLQKP 215
>gi|298103728|emb|CBM42565.1| putative B-type response regulator 14 [Populus x canadensis]
Length = 594
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 19/157 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD K++E++LK SY+VT AL LL E + +++I+D
Sbjct: 20 VLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDAL---NLLRERKGG------YDIVISD 70
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL ++ D+PV++MS + SR+ + ++ GA ++ LKP+++ ++
Sbjct: 71 VYMPDMDGFKLLEQVGLEM---DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR 127
Query: 131 KLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTR 167
+ H+ + K+I E +I LE ++S TR
Sbjct: 128 NIWQHVFR---KKIHEVRDIET----LERVESFQMTR 157
>gi|334340222|ref|YP_004545202.1| PAS sensor protein [Desulfotomaculum ruminis DSM 2154]
gi|334091576|gb|AEG59916.1| PAS sensor protein [Desulfotomaculum ruminis DSM 2154]
Length = 1276
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+D+ ++KLIE LL Y+VT V++G +AL L++ E ++++ D
Sbjct: 1055 VLLVEDNSFNQKLIEHLLTGDGYKVTMVENGQEAL---AALDQGE--------YDIVLMD 1103
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MP M GY+ R+I+ K +PV+ +++ + +CL G +++ KPV
Sbjct: 1104 MQMPVMDGYEATRQIRNMEKYKKLPVIALTAHAMKGDCEKCLSAGCDDYLAKPV 1157
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 14/114 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL ++D ++LI L+ + Y V A D G +AL T +++ Q + II D
Sbjct: 796 VLVIEDDWTTKQLITNYLEKAGYTVIATDHGKQAL-----------TLAKIYQPDAIILD 844
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+P ++G+D+L K+K++ ++ IPV++ S +P + R GA ++ KP+
Sbjct: 845 ILLPDLSGWDILVKMKKTEEIQQIPVIVCSV--LPEK-ERAFSLGAVDYIEKPI 895
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
T H++ VDD + + +++ + ++ +AL+F+ +E V
Sbjct: 912 TSEDTHIILVDDDKTALEFLRCVIEGAGFKPHPFMLAQEALDFI-FRHEP---------V 961
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSR 107
+ +I D MPGM G+D L ++ + K +PV+I + +++ +
Sbjct: 962 HAVILDLLMPGMDGFDFLDHLRSNPKFKSLPVLINTGKDLTQQ 1004
>gi|317153581|ref|YP_004121629.1| response regulator receiver [Desulfovibrio aespoeensis Aspo-2]
gi|316943832|gb|ADU62883.1| response regulator receiver [Desulfovibrio aespoeensis Aspo-2]
Length = 122
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDDS R L+ ++K ++VT + G LE L E V+LI++
Sbjct: 4 HILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKLYSAKE----------VDLIVS 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G ++ ++E + +DIP+V++S+E I L GA + +KP Q
Sbjct: 54 DVNMPRMDGLTFIKTVREQEAYRDIPIVVLSTEGQDKDIQTGLTVGANLYMVKPAQ 109
>gi|209549746|ref|YP_002281663.1| response regulator receiver protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535502|gb|ACI55437.1| response regulator receiver protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 268
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ ++G KALE L N D
Sbjct: 128 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSTAENGAKALEILKA-NRD-------- 178
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ + ++ ++ +SS + R L+ G +F L+
Sbjct: 179 -IGLMITDYNMPDIDGFELTRRIRSNIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 237
Query: 123 PV 124
P
Sbjct: 238 PF 239
>gi|434406173|ref|YP_007149058.1| signal transduction histidine kinase [Cylindrospermum stagnale PCC
7417]
gi|428260428|gb|AFZ26378.1| signal transduction histidine kinase [Cylindrospermum stagnale PCC
7417]
Length = 1165
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 12/118 (10%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFL-GLLNEDEQTNSQVIQVNL 66
++ +L VDD ++R+++ L +Y++T SG +AL L G L D L
Sbjct: 730 EWSILIVDDEPVNRQVLVNHLSLYNYEITEAASGIEALAILEGGLKPD-----------L 778
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
I+ D MP MTGYD+ R+I+++ ++P+V++++ N S + E GA ++ KP+
Sbjct: 779 ILLDVMMPRMTGYDVTRQIRQTWQASELPIVLLTARNQVSDLVVGFEAGANDYLTKPI 836
>gi|239908711|ref|YP_002955453.1| response regulator receiver protein [Desulfovibrio magneticus RS-1]
gi|239798578|dbj|BAH77567.1| response regulator receiver protein [Desulfovibrio magneticus RS-1]
Length = 316
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L V+D K+++R+L TS + VT G A++ LL++ Q + I+
Sbjct: 14 HILVVEDDKTTAKIMQRILSTSDFIVTIASDGESAID---LLSQGTQ------KFACILL 64
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D +PGMTG D+LR+IKE +L++IPV+I ++ + I + A + +KP
Sbjct: 65 DCILPGMTGLDVLRRIKEDIALRNIPVIICTALTDANNIRNAFKNEAFSYLIKP 118
>gi|86358137|ref|YP_470029.1| two-component response regulator protein [Rhizobium etli CFN 42]
gi|86282239|gb|ABC91302.1| two-component response regulator protein [Rhizobium etli CFN 42]
Length = 262
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ ++G KALE L N D
Sbjct: 122 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSTAENGAKALEILKA-NRD-------- 172
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ + ++ ++ +SS + R L+ G +F L+
Sbjct: 173 -IGLMITDYNMPDIDGFELTRRIRANIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 231
Query: 123 P 123
P
Sbjct: 232 P 232
>gi|222085608|ref|YP_002544138.1| response regulator PleD [Agrobacterium radiobacter K84]
gi|221723056|gb|ACM26212.1| two-component response regulator protein [Agrobacterium radiobacter
K84]
Length = 458
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L VDD + KL+E L ++V + G KAL QV+L++
Sbjct: 5 RILVVDDIPANVKLLEARLLAEYFEVLTAEDGLKALAI-----------CDSTQVDLVLL 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ-LAD 128
D MPGM G+D+ ++K A IPVV++++ + P+ R L+ GA++F KPV L
Sbjct: 54 DIMMPGMDGFDVCERLKSDARTSHIPVVMVTALDQPADRVRGLKAGADDFLTKPVNDLQL 113
Query: 129 VNKLKPHL-MKGISKEIKEPNNINNKRKGLEEI 160
++++K L +K +S E++ N + G+E++
Sbjct: 114 ISRVKSLLRLKTLSDELRMRNE-TARNLGIEDL 145
>gi|325294250|ref|YP_004280764.1| response regulator receiver modulated CheW protein
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064698|gb|ADY72705.1| response regulator receiver modulated CheW protein
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 321
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV 61
G+ F +L +DDS + RK+I ++L+ + V +G +AL+ L E+ +T +
Sbjct: 182 GIEKKGHFKILILDDSPVARKIIRKILENDGHTVFEAQNGIEALQMLHKWLEEAKTTGRD 241
Query: 62 I--QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEF 119
I V LII+D MPGM G RK+KE IPV+I +S + + +++ GA+
Sbjct: 242 ITDYVQLIISDIEMPGMDGLTFTRKVKEDTEFSKIPVIINTSLSDRANVDKSRFVGADAH 301
Query: 120 FLK 122
+K
Sbjct: 302 LVK 304
>gi|317052252|ref|YP_004113368.1| response regulator receiver [Desulfurispirillum indicum S5]
gi|316947336|gb|ADU66812.1| response regulator receiver [Desulfurispirillum indicum S5]
Length = 328
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 2 GMVTDSQFH-VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
MV+ Q +L VDDS RKLIE L+T+ Y V A G +A + L + ++ Q
Sbjct: 188 AMVSRRQAKTLLVVDDSAFIRKLIETTLRTAGYNVLAAQDGAEAYDILMEFEQTAKSEHQ 247
Query: 61 VIQ--VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR--CLEEGA 116
I V+L+I+D MP M G L+++++E + D+P+++ SS I S NR L GA
Sbjct: 248 PISELVSLLISDVEMPRMDGMHLVKRLRERDAYADLPILMFSS--IMSEENRRKALAIGA 305
Query: 117 EEFFLKP-----VQLAD 128
+ KP V+LAD
Sbjct: 306 NDTITKPEIGRLVELAD 322
>gi|297733626|emb|CBI14873.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 25/177 (14%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD K++E++LK SY+VT AL L E+ + +++I+D
Sbjct: 19 VLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNML-----RERKDG----FDIVISD 69
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL + D+PV++MS + SR+ + ++ GA ++ LKPV++ ++
Sbjct: 70 VNMPDMDGFKLLEHVGLEM---DLPVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELK 126
Query: 131 KLKPHLMKGISKEIKEPNNIN--NKRKGLEE--------IDSADRTRTRLNDTIDIN 177
+ H+ + K+I E ++ KRK +E +D + + R+ +ID++
Sbjct: 127 NIWQHVFR---KKIHEGKDLGATRKRKDMENRRHDDQELVDPSSSKKARVVWSIDLH 180
>gi|162660637|gb|EDQ48466.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 108
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDSI R++ +RLL+ Y+V G +A+E L E+ T L+++D
Sbjct: 7 VLVVDDSITVRRVTQRLLQREGYRVALAADGLQAMERLA---EERPT--------LVLSD 55
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M G+DLLR I+ +L+D+PVV+++S + GA + KP
Sbjct: 56 IEMPRMDGFDLLRNIRADEALRDLPVVMITSRIAQKHREMARQLGANHYLGKP 108
>gi|113474513|ref|YP_720574.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110165561|gb|ABG50101.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 1130
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 10/118 (8%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
+ FH+L VDD I+ +++ LK ++YQVT SG +AL L E+ +
Sbjct: 716 NGNFHILVVDDEPINIQVLNNYLKANNYQVTQALSGKEALAAL----ENNHN------FD 765
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
LI+ D MP MTGY++ +I+E + +PV++++++N + + + GA ++ KP
Sbjct: 766 LILLDIMMPNMTGYEVCSQIREKYPAQSLPVLMLTAKNQIADLVMGFQFGANDYLTKP 823
>gi|428769009|ref|YP_007160799.1| response regulator receiver protein [Cyanobacterium aponinum PCC
10605]
gi|428683288|gb|AFZ52755.1| response regulator receiver protein [Cyanobacterium aponinum PCC
10605]
Length = 130
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD+ R++I LK + QVT +G +A + + E E+ NL+ITD
Sbjct: 10 ILVVDDNHTPREVISEALKQFNIQVTEASNGVEATKII----EKEK-------FNLVITD 58
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY+L R IK + + +PV+I S++ I+ ++GA+ + +KP + ++
Sbjct: 59 VVMPEMNGYELCRWIKSNPGTEKVPVIICSTKGEEFDIHWATKQGADAYIIKPFKTMELL 118
Query: 131 KLKPHLMK 138
K +L+K
Sbjct: 119 KTIKYLLK 126
>gi|421593718|ref|ZP_16038241.1| response regulator receiver protein [Rhizobium sp. Pop5]
gi|403700280|gb|EJZ17492.1| response regulator receiver protein [Rhizobium sp. Pop5]
Length = 262
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ ++G KALE L N D
Sbjct: 122 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSTAENGAKALEILKA-NRD-------- 172
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ + ++ ++ +SS + R L+ G +F L+
Sbjct: 173 -IGLMITDYNMPDIDGFELTRRIRSNIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 231
Query: 123 P 123
P
Sbjct: 232 P 232
>gi|398377981|ref|ZP_10536150.1| diguanylate cyclase (GGDEF) domain-containing protein [Rhizobium
sp. AP16]
gi|397725908|gb|EJK86352.1| diguanylate cyclase (GGDEF) domain-containing protein [Rhizobium
sp. AP16]
Length = 457
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L VDD + KL+E L ++V + G KAL QV+L++
Sbjct: 4 RILVVDDIPANVKLLEARLLAEYFEVLTAEDGLKALAI-----------CDSTQVDLVLL 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ-LAD 128
D MPGM G+D+ ++K A IPVV++++ + P+ R L+ GA++F KPV L
Sbjct: 53 DIMMPGMDGFDVCERLKSDARTSHIPVVMVTALDQPADRVRGLKAGADDFLTKPVNDLQL 112
Query: 129 VNKLKPHL-MKGISKEIKEPNNINNKRKGLEEI 160
++++K L +K +S E++ N + G+E++
Sbjct: 113 ISRVKSLLRLKTLSDELRMRNE-TARNLGIEDL 144
>gi|424919277|ref|ZP_18342641.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392855453|gb|EJB07974.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 276
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ ++G KALE L N D
Sbjct: 136 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSTAENGAKALEILKA-NRD-------- 186
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ + ++ ++ +SS + R L+ G +F L+
Sbjct: 187 -IGLMITDYNMPDIDGFELTRRIRSNIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 245
Query: 123 PV 124
P
Sbjct: 246 PF 247
>gi|427713660|ref|YP_007062284.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 6312]
gi|427377789|gb|AFY61741.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 6312]
Length = 600
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 13/115 (11%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQV-TAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L VDD +R L R L+ Y+V TAVD G +ALE L D LI+
Sbjct: 193 ILVVDDVENNRVLFSRQLQRQGYEVDTAVD-GYQALEKLSHRAYD-----------LILL 240
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
DY MP + G+ +L ++K L+ IPV+++S+ + ++ RC+E GAE++ KP+
Sbjct: 241 DYMMPELNGFQVLSRLKSDQKLRHIPVIMISANDEIDQVIRCIEIGAEDYLPKPL 295
>gi|386827385|ref|ZP_10114492.1| signal transduction histidine kinase [Beggiatoa alba B18LD]
gi|386428269|gb|EIJ42097.1| signal transduction histidine kinase [Beggiatoa alba B18LD]
Length = 731
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 11/122 (9%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
T + ++L V+D++I + + L + YQ+ V++G +ALE L Q
Sbjct: 608 TAKEINILLVEDNLITAQGVSDYLTSCGYQMQTVETGRQALETLTHW-----------QP 656
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
++I+ D +P + G + RKI+E+ IP++I+++ +P+ +CLE GA E+ KP+
Sbjct: 657 HIILLDVQLPELDGLSVTRKIRENPKCCHIPIIIITAMAMPNDREKCLEAGATEYLSKPI 716
Query: 125 QL 126
L
Sbjct: 717 TL 718
>gi|94313855|ref|YP_587064.1| chemotaxis protein CheY [Cupriavidus metallidurans CH34]
gi|93357707|gb|ABF11795.1| putative response regulator receiver (CheY-like) involved in
chemotaxis [Cupriavidus metallidurans CH34]
Length = 320
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI--QVNLII 68
+L DDS + R LIE LK QV SG +A + LG + + + + ++ L++
Sbjct: 189 ILCADDSALARGLIENGLKAMGVQVVMTKSGQEAWDMLGEIADLTASKGATVRDEIALVL 248
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
TD MP M G+ L RKIK A LK +PVVI SS + + + GA+ + K
Sbjct: 249 TDLEMPEMDGFTLTRKIKADARLKSLPVVIHSSLSGEASEEHVRKVGADAYVSK 302
>gi|430809820|ref|ZP_19436935.1| chemotaxis protein CheY [Cupriavidus sp. HMR-1]
gi|429497738|gb|EKZ96263.1| chemotaxis protein CheY [Cupriavidus sp. HMR-1]
Length = 320
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI--QVNLII 68
+L DDS + R LIE LK QV SG +A + LG + + + + ++ L++
Sbjct: 189 ILCADDSALARGLIENGLKAMGVQVVMTKSGQEAWDMLGEIADLTASKGATVRDEIALVL 248
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
TD MP M G+ L RKIK A LK +PVVI SS + + + GA+ + K
Sbjct: 249 TDLEMPEMDGFTLTRKIKADARLKSLPVVIHSSLSGEASEEHVRKVGADAYVSK 302
>gi|37677133|ref|NP_937529.1| response regulator [Vibrio vulnificus YJ016]
gi|37201678|dbj|BAC97499.1| response regulator [Vibrio vulnificus YJ016]
Length = 364
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS + + + L +S Y V A SG AL L EQ +++L++ D
Sbjct: 11 VLIVDDSADNLAFMAQGL-SSRYHVKAAKSGEMALHIL------EQ-----FEIDLVLLD 58
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV- 129
MP ++GYD++RKI+ + +DIPVV ++ ++ P E GA ++ KPV + +
Sbjct: 59 IVMPELSGYDVIRKIRANHKTQDIPVVFLTGKDSPEDEKLGFELGAVDYIHKPVSIPLLR 118
Query: 130 NKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTR 167
+++K HL SK+ N +++ L+ DR +
Sbjct: 119 SRVKTHLQNKRSKDFLRDQNGYLEKEVLKRSHELDRMQ 156
>gi|409405789|ref|ZP_11254251.1| chemotaxis regulator protein [Herbaspirillum sp. GW103]
gi|386434338|gb|EIJ47163.1| chemotaxis regulator protein [Herbaspirillum sp. GW103]
Length = 135
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSY-QVTAVDSGNKALEFLGLLNEDEQTNSQV 61
M D Q+ L VDD R+++ LLK Y ++ D G+ AL+ L +
Sbjct: 1 MAADDQYF-LVVDDFSTMRRIVSGLLKELEYTKMVEADDGSSALKIL---------EAGA 50
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
+ V ++TD+ MPGM G LL+KI+ + SL +PV+++++E I + GA+ + +
Sbjct: 51 LPVTFVLTDWNMPGMDGLTLLKKIRATPSLAHLPVLMITAEAKKENIVVAAQSGADGYIV 110
Query: 122 KPVQLA 127
KP A
Sbjct: 111 KPFTAA 116
>gi|169828266|ref|YP_001698424.1| ethylene receptor [Lysinibacillus sphaericus C3-41]
gi|168992754|gb|ACA40294.1| Ethylene receptor [Lysinibacillus sphaericus C3-41]
Length = 1015
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 74/136 (54%), Gaps = 12/136 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD I+ +++E +L Y + V SG +AL + Q + +L+I+D
Sbjct: 684 ILVVDDEPINLRVVETILANEPYDIVTVTSGIEALVCI-----------QSHEWDLVISD 732
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M+GY+L+R I++ S+ D+PV+++++ + P + GA ++ KPV ++
Sbjct: 733 VMMPKMSGYELVRLIRKQFSITDLPVLLLTARSQPQDLENGFLAGANDYVTKPVDALELR 792
Query: 131 KLKPHLMKGISKEIKE 146
L+K + + I+E
Sbjct: 793 SRVAALIK-VKRSIQE 807
>gi|415942145|ref|ZP_11555873.1| Chemotaxis response regulator [Herbaspirillum frisingense GSF30]
gi|407758932|gb|EKF68696.1| Chemotaxis response regulator [Herbaspirillum frisingense GSF30]
Length = 133
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 10/125 (8%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSY-QVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+ D+ H L VDD R+++ LLK Y ++ D G+ AL+ L S
Sbjct: 1 MADTDQHFLVVDDFSTMRRIVSGLLKELEYTKIVEADDGSTALKIL---------ESGAS 51
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ ++TD+ MP M G LL+KI+ S +L +PV+++++E I +EGA+ + +K
Sbjct: 52 NITFVLTDWNMPVMDGLTLLKKIRSSPALAHLPVLMITAEAKKENIVMAAQEGADGYIVK 111
Query: 123 PVQLA 127
P A
Sbjct: 112 PFNAA 116
>gi|427417143|ref|ZP_18907326.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 7375]
gi|425759856|gb|EKV00709.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 7375]
Length = 122
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS R++I LL + V + G KA + + D L++ D
Sbjct: 4 VLIVDDSSTLREMISGLLIKAGMTVLEAEDGEKAKDMISSRPPD-----------LVVLD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY+L R +K + KD+PVVI SS+N +++GA+ + KP + A++
Sbjct: 53 IVMPNMNGYELCRWVKNNGPTKDVPVVICSSKNEEFDRYWGMKQGADAYIAKPFRPAEMV 112
Query: 131 KLKPHLMKG 139
+ HL++G
Sbjct: 113 ETVKHLLRG 121
>gi|410094188|ref|ZP_11290639.1| sensory box protein/response regulator [Pseudomonas viridiflava
UASWS0038]
gi|409758403|gb|EKN43706.1| sensory box protein/response regulator [Pseudomonas viridiflava
UASWS0038]
Length = 705
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 11/119 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + R L+E LL+ Y+ +SG +ALE + D LI+ D
Sbjct: 8 ILIVDDDVHVRDLLEVLLQNQHYRTQTAESGEQALEMVEKHAPD-----------LILLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MPGM GY++ ++K + +IP++++S+ + S LE GAEE+ KPV A++
Sbjct: 57 IMMPGMDGYEVASRLKSGKTTSNIPIIMLSALDERSARISGLEAGAEEYLNKPVDSAEL 115
>gi|443324752|ref|ZP_21053483.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Xenococcus sp. PCC 7305]
gi|442795636|gb|ELS04992.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Xenococcus sp. PCC 7305]
Length = 121
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+DS+ R++I LLK S +V G +ALE+L N D +++ D
Sbjct: 4 VLIVEDSLAQRQMISDLLKGSGLKVVVASDGVEALEYLEKFNPD-----------IVVMD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MP M GY+L R++K +++PVV+ SS+ +++GA+ + KP Q
Sbjct: 53 IVMPRMNGYELCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQ 107
>gi|427720681|ref|YP_007068675.1| integral membrane sensor hybrid histidine kinase [Calothrix sp. PCC
7507]
gi|427353117|gb|AFY35841.1| integral membrane sensor hybrid histidine kinase [Calothrix sp. PCC
7507]
Length = 948
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD +R I L+ + + + G + LE + + +LIITD
Sbjct: 741 VLIVDDHWENRSFIINFLQPLGFAMQEAEHGKQGLE-----------KAIEFEPDLIITD 789
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD-- 128
MP M GY++L +++S ++IPVV+ S+ S ++ LE GA EF KPVQ AD
Sbjct: 790 ILMPVMDGYEMLASLRQSPLFQNIPVVVSSASVFKSDKHKSLEAGANEFLPKPVQ-ADSL 848
Query: 129 VNKLKPHL-MKGISKEIKEPNNINNKRK 155
+ L+ HL ++ + +E E N + K
Sbjct: 849 LEALRVHLQLEWMYEEALEEKKHNKQTK 876
>gi|320159221|ref|YP_004191599.1| response regulator [Vibrio vulnificus MO6-24/O]
gi|319934533|gb|ADV89396.1| response regulator [Vibrio vulnificus MO6-24/O]
Length = 364
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS + + + L +S Y V A SG AL L EQ +++L++ D
Sbjct: 11 VLIVDDSADNLAFMAQGL-SSRYHVKAAKSGEMALHIL------EQ-----FEIDLVLLD 58
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV- 129
MP ++GYD++RKI+ + +DIPVV ++ ++ P E GA ++ KPV + +
Sbjct: 59 IVMPELSGYDVIRKIRANHKTQDIPVVFLTGKDSPEDEKLGFELGAADYIHKPVSIPLLR 118
Query: 130 NKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTR 167
++++ HL SK+ N +++ L+ DR +
Sbjct: 119 SRVRTHLQNKRSKDFLRDQNGYLEKEVLKRSHELDRMQ 156
>gi|322421480|ref|YP_004200703.1| multi-sensor signal transduction histidine kinase [Geobacter sp.
M18]
gi|320127867|gb|ADW15427.1| multi-sensor signal transduction histidine kinase [Geobacter sp.
M18]
Length = 580
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 11/114 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+DS + +++ R+L+ Y+ +G + L T +Q ++ +LI++D
Sbjct: 11 VLIVEDSPVQVEVLNRMLEQEGYRTVFAKNGAEGL-----------TLAQTLKPSLILSD 59
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MP M GY + R++K++ L++IPV++M+ P I R LE GA+ + K V
Sbjct: 60 VVMPVMDGYRMCRELKDTGHLRNIPVILMTQLYEPEEIIRGLESGADAYMTKTV 113
>gi|84570629|dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lemna paucicostata]
Length = 448
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS RK++ LL+ SY+V++ G LE L E ++L++T+
Sbjct: 35 LVEADDST--RKIVAALLRKCSYKVSSASDG---LEAWKTLKESPNN------IDLVLTE 83
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++GY LL + E S K IPV++MSS + + C+ +GA +F +KP++ ++
Sbjct: 84 VELPNVSGYALLSMMMEHDSCKSIPVIMMSSRDSMKMVFECMLKGAADFLVKPIRKNELR 143
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 144 NLWQHVWR 151
>gi|402771988|ref|YP_006591525.1| adenylate/guanylate cyclase [Methylocystis sp. SC2]
gi|401774008|emb|CCJ06874.1| Adenylate/guanylate cyclase [Methylocystis sp. SC2]
Length = 547
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 65/113 (57%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD+ +R+L++R L+ + V ++G+ +LE L + +LI+ D
Sbjct: 198 ILVVDDNASNRELLKRRLERQGHSVALAENGSCSLEML-----------RKEPFDLILLD 246
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP ++G D+L +K L+DIPV+++S+ N I RC++ GAE++ KP
Sbjct: 247 LLMPDISGLDVLSILKSEPDLRDIPVIVISALNEIDSIVRCIQAGAEDYLAKP 299
>gi|289577852|ref|YP_003476479.1| response regulator receiver protein [Thermoanaerobacter italicus
Ab9]
gi|289527565|gb|ADD01917.1| response regulator receiver protein [Thermoanaerobacter italicus
Ab9]
Length = 266
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
MG +S+ +L VDDS + R +++ +L Y V + +A+ L + N+ E
Sbjct: 1 MGEKKNSK-SILIVDDSRLIRLIVKDILGVEGYDVETAATAEEAI--LKVKNKKEL---- 53
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
+L+I D +P G++ +RK+K A K+IPV+I+S + P + + +E GA E+
Sbjct: 54 ---FDLVIVDINLPNQNGFEFIRKLKSQAEYKNIPVMILSGDATPPSVRQAIEVGAVEYL 110
Query: 121 LKPVQLADVNK 131
+KP + A++ K
Sbjct: 111 IKPFKAAELLK 121
>gi|424884779|ref|ZP_18308390.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|424895445|ref|ZP_18319019.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393176541|gb|EJC76582.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393179672|gb|EJC79711.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 276
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ ++G KALE L N D
Sbjct: 136 FLTNHRHHVLIVDDSATARALLSSRLKRYNFRVSVAENGAKALEILKA-NRD-------- 186
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L+ITDY MP + G++L R+I+ + ++ ++ +SS + R L+ G +F L+
Sbjct: 187 -IGLMITDYNMPDIDGFELTRRIRSNIGSHELRIIGVSSSSNRLLSARFLKAGGNDFMLR 245
Query: 123 PV 124
P
Sbjct: 246 PF 247
>gi|410466028|ref|ZP_11319178.1| chemotaxis signal transduction protein [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409980960|gb|EKO37604.1| chemotaxis signal transduction protein [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 329
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ- 63
+ S++ L DDS++ R++++ LL + + VTAV +G +A E L + + + Q +
Sbjct: 186 SSSRYRALVADDSVLVREMLKDLLNKAGFDVTAVQNGREAWELLSQIKDKSEAEHQPLSN 245
Query: 64 -VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSS 101
V+ ++ D MP M G++L ++IK+ L+++PV++ SS
Sbjct: 246 FVHCMVADIEMPAMDGHNLTKRIKDDPLLRELPVILFSS 284
>gi|307107757|gb|EFN55999.1| hypothetical protein CHLNCDRAFT_30989, partial [Chlorella
variabilis]
Length = 334
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV 61
G+ + S VL VDD + K++ +L+ +Y+V SG AL LL D Q ++
Sbjct: 27 GLFSPSGLKVLVVDDDPMCLKVVSAMLQRCNYEVDTRTSGQDAL----LLLRDRQEHNH- 81
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
Q +L+++D MP M G+ LL I D+PV++MSS + R + GA +F +
Sbjct: 82 -QFDLVLSDVYMPDMDGFKLLEHIGLEL---DLPVIMMSSNGDTDVVLRGVTHGAVDFLI 137
Query: 122 KPVQLADVNKLKPHLMK 138
KPV++ ++ + H+++
Sbjct: 138 KPVRVEELRNVWQHVVR 154
>gi|417859956|ref|ZP_12505012.1| two component response regulator [Agrobacterium tumefaciens F2]
gi|338823020|gb|EGP56988.1| two component response regulator [Agrobacterium tumefaciens F2]
Length = 277
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ DSG KALE L N D
Sbjct: 136 FLTNHRHHVLIVDDSPTARALLSSRLKRYNFRVSLADSGAKALEILK-ANPD-------- 186
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L++TDY MP + G++L R+I+ ++ ++ +SS R L+ G +F L+
Sbjct: 187 -IGLVVTDYNMPDIDGFELTRRIRTVRGSHELRIIGVSSSTNRLLSARFLKAGGNDFMLR 245
Query: 123 P 123
P
Sbjct: 246 P 246
>gi|297735895|emb|CBI18671.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 12/128 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD L++ LL+ YQVT N+A+ L +L E++ +L+I+D
Sbjct: 26 VLAVDDDPTCLMLLDGLLRRCQYQVTTT---NQAITALKMLRENKNN------FDLVISD 76
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL + D+PV+++SS + P + R + GA ++ LKPV++ ++
Sbjct: 77 VSMPDMDGFKLLELVGLEM---DLPVIMLSSHSDPKLVMRGITHGACDYLLKPVRIEELK 133
Query: 131 KLKPHLMK 138
+ H+++
Sbjct: 134 NIWQHVIR 141
>gi|427417439|ref|ZP_18907622.1| phosphoacceptor domain-containing protein [Leptolyngbya sp. PCC
7375]
gi|425760152|gb|EKV01005.1| phosphoacceptor domain-containing protein [Leptolyngbya sp. PCC
7375]
Length = 465
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
M + D +L VDD + K++ +LK + + + G A+E +Q
Sbjct: 1 MSVSFDKPVRILLVDDKPTNLKMLSDVLKGNDWTMLVATDGVSAIE-----------QAQ 49
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
Q +LI+ D MPG+ G++ +++K +A K IP++ M++ + R LE GA ++
Sbjct: 50 YAQPSLILLDVMMPGIDGFETCQRLKTNAKTKAIPIIFMTALSDSDHKVRGLEMGAVDYI 109
Query: 121 LKPVQLADV-NKLKPHL-MKGISKEIKEPNNI 150
KP Q +V ++K HL +K +++E++E N +
Sbjct: 110 TKPFQQKEVIARVKLHLHLKFLAQELEEKNKL 141
>gi|333923713|ref|YP_004497293.1| multi-sensor hybrid histidine kinase [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333749274|gb|AEF94381.1| multi-sensor hybrid histidine kinase [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 1274
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 18/144 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+D+ +++LI+ LL + Y+VT ++G +ALE L N D +++ D
Sbjct: 1055 VLLVEDNQFNQRLIQHLLADNGYRVTLAENGQQALEMLNQSNFD-----------IVLMD 1103
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY+ R I+ K +P++ +++ + +CL G +++ KPV+
Sbjct: 1104 MQMPVMDGYETTRVIRSDERYKSLPIIALTAHAMKGDNEKCLAAGCDDYLAKPVK----- 1158
Query: 131 KLKPHLMKGISKEIKEPNNINNKR 154
+ L+K I K I+ + R
Sbjct: 1159 --RDILIKTIKKYIQPGQRVKKSR 1180
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL +D ++LI L+ + Y V A D G + L T +++ Q ++++ D
Sbjct: 796 VLVAEDEWTTKQLIANYLEKAGYTVVATDQGKQVL-----------TLAKIYQPDVLVLD 844
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+P ++G+++L KIK+ +DIPVV+ S +P + R GA +F KPV
Sbjct: 845 ILLPDLSGWEVLAKIKKDQETQDIPVVVCSV--LPEK-ERAFSLGAVDFIEKPV 895
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
Q H++ +DD + + + ++ + YQ + +AL ++ +N QV+ I
Sbjct: 915 QTHIVLIDDDKMALEFLNCIVGGAGYQTHSFMLAEEALNYI--INGG--------QVHAI 964
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIP----SRINRCLEEGAEEFFLKP 123
I D MPGM G++ L ++ A+ K IPV+I + +++ ++N E + F+ P
Sbjct: 965 ILDLLMPGMDGFEFLDNLRADANYKSIPVLIYTGKDLTKEDYQKLNDKYERLLNKSFMHP 1024
>gi|325293017|ref|YP_004278881.1| two component response regulator [Agrobacterium sp. H13-3]
gi|418408284|ref|ZP_12981600.1| two component response regulator [Agrobacterium tumefaciens 5A]
gi|325060870|gb|ADY64561.1| two component response regulator [Agrobacterium sp. H13-3]
gi|358005198|gb|EHJ97524.1| two component response regulator [Agrobacterium tumefaciens 5A]
Length = 277
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ DSG KALE L N D
Sbjct: 136 FLTNHRHHVLIVDDSPTARALLSSRLKRYNFRVSLADSGAKALEILK-ANPD-------- 186
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L++TDY MP + G++L R+I+ ++ ++ +SS R L+ G +F L+
Sbjct: 187 -IGLVVTDYNMPDIDGFELTRRIRTVRGSHELRIIGVSSSTNRLLSARFLKAGGNDFMLR 245
Query: 123 P 123
P
Sbjct: 246 P 246
>gi|88603985|ref|YP_504163.1| response regulator receiver domain-containing protein
[Methanospirillum hungatei JF-1]
gi|88189447|gb|ABD42444.1| response regulator receiver domain protein (CheY-like)
[Methanospirillum hungatei JF-1]
Length = 436
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 11/118 (9%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
D+ H+L V+D+ + + LL+ +QVT +G +ALE + E+++ +
Sbjct: 6 DTSLHILIVEDNRTQAEYLRHLLEKRGHQVTVSQNGFEALERI----EEKRPD------- 54
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+I+TD MP M GY L + +K+ DIPV++++ P + + LE GA+ F +KP
Sbjct: 55 IILTDVMMPDMDGYTLCKTVKQHEKFHDIPVILVTHLYSPVDVIKGLEAGADNFIIKP 112
>gi|407921335|gb|EKG14486.1| hypothetical protein MPH_08335 [Macrophomina phaseolina MS6]
Length = 357
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 11/129 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L DD+ I+R + RL+ + V V+ G AL+FL E ++++ + +LI+
Sbjct: 223 QILIADDNEINRHIALRLISKRGFSVNLVEDGRSALDFL-----IESSDNEWRRPDLILM 277
Query: 70 DYCMPGMTGYDLLRKIKESA------SLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D MP M GY+ + I++ A ++ IP++ M++ IP +C G +F LKP
Sbjct: 278 DLQMPRMDGYEATQAIRKGAMFDKMPWVRGIPIIAMTASAIPEEEAKCRSSGMNDFILKP 337
Query: 124 VQLADVNKL 132
++ ++K+
Sbjct: 338 LRAESLDKI 346
>gi|309792653|ref|ZP_07687106.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Oscillochloris trichoides DG-6]
gi|308225281|gb|EFO79056.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Oscillochloris trichoides DG6]
Length = 717
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 12/177 (6%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD R +I R L + VT V +G AL L + N D L++ D
Sbjct: 6 ILVVDDHETIRNMISRQLMQQGHDVTCVANGKDALALLRIQNFD-----------LVLLD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ-LADV 129
MP + G +LR IK L D+PVVI+S + + C++ GAE++ KP L
Sbjct: 55 MVMPEVDGAMVLRVIKHDPHLSDLPVVIISGDTNIEHVVTCIQMGAEDYLFKPFNPLLLQ 114
Query: 130 NKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTIDINNDGLPDLEI 186
K+ L K ++ + +R+ E +R+ R NDGL D ++
Sbjct: 115 TKVSVSLAKKRLQDQERRQRAELERQIAERAVELERSEERYALAARGANDGLWDWDV 171
>gi|388567570|ref|ZP_10154001.1| CheA signal transduction histidine kinase [Hydrogenophaga sp. PBC]
gi|388265175|gb|EIK90734.1| CheA signal transduction histidine kinase [Hydrogenophaga sp. PBC]
Length = 1974
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDSI R++ +RLL+ Y+V G +ALE L QV + ++++D
Sbjct: 1853 VLVVDDSITVRRVTQRLLQREGYRVVMAADGLQALERL-----------QVERPAVVLSD 1901
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M G+DL+R I+ A L D+PV++++S E G + + KP
Sbjct: 1902 IEMPRMDGFDLVRNIRADARLADLPVIMITSRIAEKHREHARELGVDHYLGKP 1954
>gi|218780205|ref|YP_002431523.1| response regulator receiver protein [Desulfatibacillum alkenivorans
AK-01]
gi|218761589|gb|ACL04055.1| Protein with response regulator receiver domain [Desulfatibacillum
alkenivorans AK-01]
Length = 305
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+ F +L DD + R+L+E LK S Y+VT GN+ LE + Q + +L
Sbjct: 2 AGFLILITDDEPMQRELLEEYLKLSHYRVTHAKDGNQCLEMM-----------QQHEPDL 50
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
++ D MPGM G+ L +I++ ++ D PV+ +SS + + LE GA+++ KP
Sbjct: 51 VLLDIQMPGMDGFATLTQIRKIPAIADTPVLFLSSLDRQHLKVKGLELGADDYITKPFH 109
>gi|170077988|ref|YP_001734626.1| two-component system response regulator [Synechococcus sp. PCC
7002]
gi|169885657|gb|ACA99370.1| two-component system response regulator [Synechococcus sp. PCC
7002]
Length = 131
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L V+DS+ R++I LLK + V G +ALE L + + N+ NLI+
Sbjct: 3 RILVVEDSLSQREMISELLKGNGLTVDVAGDGLEALETLSQMAK----NAAETLPNLIVL 58
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP M GY+L R++K +++IP+V+ SS+ +++GA+ + KP Q A++
Sbjct: 59 DIVMPRMNGYELCRRLKSDPKIQNIPIVMCSSKGEEFDRYWGMKQGADAYIAKPFQPAEL 118
>gi|323701833|ref|ZP_08113503.1| multi-sensor hybrid histidine kinase [Desulfotomaculum nigrificans
DSM 574]
gi|323533137|gb|EGB23006.1| multi-sensor hybrid histidine kinase [Desulfotomaculum nigrificans
DSM 574]
Length = 1274
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 18/144 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+D+ +++LI+ LL + Y+VT ++G +ALE L N D +++ D
Sbjct: 1055 VLLVEDNQFNQRLIQHLLADNGYRVTLAENGQQALEMLNQSNFD-----------IVLMD 1103
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY+ R I+ K +P++ +++ + +CL G +++ KPV+
Sbjct: 1104 MQMPVMDGYETTRVIRSDERYKSLPIIALTAHAMKGDNEKCLAAGCDDYLAKPVK----- 1158
Query: 131 KLKPHLMKGISKEIKEPNNINNKR 154
+ L+K I K I+ + R
Sbjct: 1159 --RDILIKTIKKYIQPGQRVKKSR 1180
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL +D ++LI L+ + Y V A D G +AL T +++ Q ++++ D
Sbjct: 796 VLVAEDEWTTKQLIANYLEKAGYTVVATDQGKQAL-----------TLAKIYQPDVLVLD 844
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+P ++G+++L KIK+ +DIPVV+ S +P + R GA +F K V
Sbjct: 845 ILLPDLSGWEVLAKIKKDQETQDIPVVVCSV--LPEK-ERAFSLGAVDFIEKTV 895
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
Q H++ +DD + + + ++ + YQ + +AL ++ +N QV+ I
Sbjct: 915 QTHIVLIDDDKMALEFLNCIVGGAGYQTHSFMLAEEALNYI--INGG--------QVHAI 964
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIP----SRINRCLEEGAEEFFLKP 123
I D MPGM G++ L ++ A+ K IPV+I + +++ ++N E + F+ P
Sbjct: 965 ILDLLMPGMDGFEFLDNLRADANYKSIPVLIYTGKDLTKEDYQKLNDKYERLLNKSFMHP 1024
>gi|411011939|ref|ZP_11388268.1| chemotaxis protein CheV [Aeromonas aquariorum AAK1]
gi|423198414|ref|ZP_17184997.1| hypothetical protein HMPREF1171_03029 [Aeromonas hydrophila SSU]
gi|404630306|gb|EKB27004.1| hypothetical protein HMPREF1171_03029 [Aeromonas hydrophila SSU]
Length = 337
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ--VNLII 68
+L VDDS RK+IE L+T+ Y V G LE L + Q + V+ II
Sbjct: 199 ILVVDDSAFIRKMIETTLRTAGYNVVTAKDGGDGLEMLMEFDRLSQEEKIPVAEFVSGII 258
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TD MP M G LL++++++ + K IP+V+ SS + L+ GA + KP +L
Sbjct: 259 TDVEMPRMDGMHLLKRLRDTPAFKTIPIVMFSSLMSDDNRQKALQLGANDTITKP-ELGR 317
Query: 129 VNKLKPHLMKGISKEIKEPNNI 150
+ + + + GI I +P N+
Sbjct: 318 MVGMMDNFLLGIP--IPKPGNL 337
>gi|397691109|ref|YP_006528363.1| response regulator receiver protein [Melioribacter roseus P3M]
gi|395812601|gb|AFN75350.1| response regulator receiver protein [Melioribacter roseus P3M]
Length = 121
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DDS RK + L T Y++ A G +ALE L N +++L+ITD
Sbjct: 5 ILVADDSPTIRKFVSVALSTKGYEIIACADGMEALEKL-------PGN----KIDLLITD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP + G+ L++ I+E+ K++P++++SS I+R LE GA + +KP
Sbjct: 54 LNMPNIDGFQLIKSIRENEEYKELPIIVLSSLGSSEDIHRGLEYGANSYLIKP 106
>gi|379025542|dbj|BAL63548.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPVV+MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVVMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|303326752|ref|ZP_07357194.1| chemotaxis protein CheY [Desulfovibrio sp. 3_1_syn3]
gi|345890763|ref|ZP_08841627.1| hypothetical protein HMPREF1022_00287 [Desulfovibrio sp.
6_1_46AFAA]
gi|302862740|gb|EFL85672.1| chemotaxis protein CheY [Desulfovibrio sp. 3_1_syn3]
gi|345048989|gb|EGW52809.1| hypothetical protein HMPREF1022_00287 [Desulfovibrio sp.
6_1_46AFAA]
Length = 122
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H++ VDDS R L+ +LK+ ++V+ + G A+E L L V+LI++
Sbjct: 4 HIMVVDDSKTIRNLVAFVLKSEGFKVSTAEDGLDAIEKLYSLEP----------VDLIVS 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G+ ++ I+ + KDIP++++S+E I + GA + +KP Q
Sbjct: 54 DVNMPRMDGFTFIKTIRTQDAYKDIPIIVLSTEGQEQDIQTGMSLGANLYMVKPAQ 109
>gi|359454385|ref|ZP_09243669.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20495]
gi|414070269|ref|ZP_11406256.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. Bsw20308]
gi|358048556|dbj|GAA79918.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20495]
gi|410807367|gb|EKS13346.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. Bsw20308]
Length = 299
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 12/113 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD ++R ++E+ LK + V V+SG KAL F+ + QV+LII D
Sbjct: 7 VLIVDDDPLNRLVLEKTLK-GEHDVFLVESGEKALTFV-----------KTTQVDLIILD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MPG+ GY++L ++KE+ + IP++ +S+ ++ LE GA ++ +KP
Sbjct: 55 VVMPGIDGYEVLVQLKENPITQSIPIIFISANQSHEDESKGLELGAMDYIIKP 107
>gi|145297541|ref|YP_001140382.1| two-component system chemotzxis response regulator [Aeromonas
salmonicida subsp. salmonicida A449]
gi|418359544|ref|ZP_12961219.1| two-component system chemotzxis response regulator [Aeromonas
salmonicida subsp. salmonicida 01-B526]
gi|142850313|gb|ABO88634.1| two-component system chemotzxis response regulator [Aeromonas
salmonicida subsp. salmonicida A449]
gi|356688280|gb|EHI52842.1| two-component system chemotzxis response regulator [Aeromonas
salmonicida subsp. salmonicida 01-B526]
Length = 337
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ--VNLII 68
+L VDDS RK+IE L+T+ Y V G + LE L + Q + V+ II
Sbjct: 199 ILVVDDSAFIRKMIETTLRTAGYNVVTAKDGGEGLEMLTEFDRLSQEEKIPVSEFVSGII 258
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TD MP M G LL++++++ + K P+++ SS + L+ GA + KP +L
Sbjct: 259 TDVEMPRMDGMHLLKRLRDTPAFKTTPIIMFSSLMSDDNRQKALQLGANDTITKP-ELGR 317
Query: 129 VNKLKPHLMKGISKEIKEPNNI 150
+ + +L+ GI I +P N+
Sbjct: 318 MVGMMDNLLLGIP--IPKPGNL 337
>gi|312879216|ref|ZP_07739016.1| response regulator receiver modulated diguanylate cyclase
[Aminomonas paucivorans DSM 12260]
gi|310782507|gb|EFQ22905.1| response regulator receiver modulated diguanylate cyclase
[Aminomonas paucivorans DSM 12260]
Length = 466
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+DS+ K +ER+L+ + + V G L+ ++ + +IITD
Sbjct: 19 ILVVEDSLTQAKRLERVLRENGFAVRVARDGQAGLD-----------AAREQRPTVIITD 67
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M G+++ R IKE +L++IPV++++S + P I R L GA+ F KP
Sbjct: 68 VMMPRMDGFEMCRCIKEDRALREIPVMVLTSLSDPQDIIRGLHCGADNFLTKP 120
>gi|456359240|dbj|BAM93449.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359248|dbj|BAM93453.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 38 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 88
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 89 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 148
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 149 KNLWAHVWR 157
>gi|456359230|dbj|BAM93444.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359232|dbj|BAM93445.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359234|dbj|BAM93446.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 38 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 88
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 89 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 148
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 149 KNLWAHVWR 157
>gi|456359228|dbj|BAM93443.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359236|dbj|BAM93447.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359238|dbj|BAM93448.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359242|dbj|BAM93450.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359260|dbj|BAM93459.1| pseudo-response regulator [Triticum dicoccoides]
Length = 662
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 38 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 88
Query: 71 YCMPG-MTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G ++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 89 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 148
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 149 KNLWAHVWR 157
>gi|449524812|ref|XP_004169415.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 794
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R L+ LL+ SY+V A +G A + L ++ TN ++L++T+
Sbjct: 91 VLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKML-----EDLTN----HIDLVLTE 141
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI + K+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 142 VVMPCLSGIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELK 201
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 202 NLWQHVWR 209
>gi|427707722|ref|YP_007050099.1| Cache sensor hybrid histidine kinase [Nostoc sp. PCC 7107]
gi|427360227|gb|AFY42949.1| Cache sensor hybrid histidine kinase [Nostoc sp. PCC 7107]
Length = 814
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 79/150 (52%), Gaps = 13/150 (8%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
DS +L VDD +R +I LL+ + V ++G + L + I+ +
Sbjct: 597 DSPRTILMVDDRWENRTVITNLLQPLGFNVVEANNGQEGL-----------AKAIAIKPD 645
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
L+ITD MP M G++L+ ++ + ++D+ +++ S+ + NR L+ G +F KPVQ
Sbjct: 646 LVITDLLMPEMDGFELIHSLRCTPEIQDVKIIVSSASVFETDQNRSLQAGGNDFLSKPVQ 705
Query: 126 LAD-VNKLKPHL-MKGISKEIKEPNNINNK 153
+ + +N+L+ HL + I ++ + + NK
Sbjct: 706 VDELLNQLEKHLNLTWIYQQSQSERQVTNK 735
>gi|434407969|ref|YP_007150854.1| histidine kinase,Response regulator receiver domain
protein,histidine kinase [Cylindrospermum stagnale PCC
7417]
gi|428262224|gb|AFZ28174.1| histidine kinase,Response regulator receiver domain
protein,histidine kinase [Cylindrospermum stagnale PCC
7417]
Length = 432
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 75/128 (58%), Gaps = 14/128 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD+I + ++I +L + ++VT G KAL+ + +D+Q N LI+ D
Sbjct: 10 ILVVDDTITNLEIISIILTNAGFEVTTAIDGQKALDLV----QDKQPN-------LILLD 58
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPVQLAD- 128
MPG+ G++ +++K++ DIPV+ M++ + S++ + L GA ++ +KP Q +
Sbjct: 59 LMMPGIDGFETCKRLKQNQETSDIPVIFMTAIVDTESKV-KALSLGAVDYIIKPFQQEEV 117
Query: 129 VNKLKPHL 136
V ++K HL
Sbjct: 118 VARIKTHL 125
>gi|73538810|ref|YP_299177.1| response regulator receiver:CheW-like protein [Ralstonia eutropha
JMP134]
gi|72122147|gb|AAZ64333.1| Response regulator receiver:CheW-like protein [Ralstonia eutropha
JMP134]
Length = 318
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI--QVNLII 68
V+A DDS + R LIE+ LK V SG +A + L + + +N + I +V L++
Sbjct: 189 VIAADDSALARGLIEQSLKALGAPVLMTKSGKEAWDLLDSMAAEAASNGRSIHDEVALVL 248
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSS 101
TD MP M G+ L RKIK + LK +PVVI SS
Sbjct: 249 TDLEMPEMDGFTLTRKIKADSRLKSLPVVIHSS 281
>gi|298103722|emb|CBM42562.1| putative B-type response regulator 19 [Populus x canadensis]
Length = 685
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 12/146 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD I K++E LL+ Y+VT N+A+ L +L E+ + +L+I+D
Sbjct: 23 VLAVDDDPICLKVLENLLRKCQYEVTTT---NQAVTALEMLRENRN------KYDLVISD 73
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL + D+PV+++SS + + + GA ++ LKPV+L ++
Sbjct: 74 VNMPDMDGFKLLELVGLEM---DLPVIMLSSHGDKEFVYKGITHGAVDYLLKPVRLEELK 130
Query: 131 KLKPHLMKGISKEIKEPNNINNKRKG 156
+ H+++ ++ N N+ KG
Sbjct: 131 NIWQHVIRRKKWYPQDQNGSPNQDKG 156
>gi|427400663|ref|ZP_18891901.1| hypothetical protein HMPREF9710_01497 [Massilia timonae CCUG 45783]
gi|425720176|gb|EKU83099.1| hypothetical protein HMPREF9710_01497 [Massilia timonae CCUG 45783]
Length = 1756
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
V+ VDDS+ R++ +RLL+ Y+V G +ALE +G D L++ D
Sbjct: 1639 VMVVDDSLTVRRVTQRLLEREGYRVQLAKDGVEALELIGQGAPD-----------LMLVD 1687
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+DL R ++ + + KDIP+++++S N L G ++ KP Q
Sbjct: 1688 IEMPRMDGFDLTRNVRGNEATKDIPIIMITSRTADKHRNVALGLGVNAYYGKPYQ----- 1742
Query: 131 KLKPHLMKGISKEIK 145
+P L+ I + +K
Sbjct: 1743 --EPVLLAAIEELLK 1755
>gi|356520227|ref|XP_003528765.1| PREDICTED: two-component response regulator-like PRR95-like isoform
2 [Glycine max]
Length = 722
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL+ SY V AV G KA E L + +++LI+
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETL---------KKKAPELDLIL 79
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++G+ LL I E K+IPV++MSS + S +C+ +GA +F +KP++ +
Sbjct: 80 TEVELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNE 139
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 140 LRNLWQHVWR 149
>gi|218782319|ref|YP_002433637.1| response regulator receiver modulated diguanylate cyclase
[Desulfatibacillum alkenivorans AK-01]
gi|218763703|gb|ACL06169.1| response regulator receiver modulated diguanylate cyclase
[Desulfatibacillum alkenivorans AK-01]
Length = 301
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L +DDS + + + +L ++VT +G + LE + + D LI+ D
Sbjct: 4 ILVIDDSRLIAHVAKNMLTARGHEVTVATNGEEGLEAVATIKPD-----------LILLD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD-V 129
MPGM GY + KIK S + DIPV++++S+ + R LE GA ++ KP + + V
Sbjct: 53 LIMPGMDGYAVCEKIKGSPATADIPVIMLTSKAETADKVRGLEAGASDYVTKPFEEGELV 112
Query: 130 NKLKPHL-MKGISKEIKEPN 148
++ HL +K + + ++E N
Sbjct: 113 ARVNTHLRIKELYESLQETN 132
>gi|443318927|ref|ZP_21048168.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
gi|442781461|gb|ELR91560.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
Length = 1123
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 17/128 (13%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H+L VDD+ R + +L+ YQV SG ALE +SQ NLI+T
Sbjct: 772 HILVVDDNADLRAYVSHVLQRQGYQVRTAHSGTMALEM---------AHSQ--PPNLILT 820
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSE-NIPSRINRCLEEGAEEFFLKPVQ--- 125
D MPGM+G +L++++++ L+ +PVV+++++ + +RI +E+GA+ + KP
Sbjct: 821 DLMMPGMSGLELIQQVRQDERLRTVPVVLLTAKVDDETRIEG-MEQGADAYLSKPFNDRE 879
Query: 126 -LADVNKL 132
LA+V L
Sbjct: 880 LLAEVRNL 887
>gi|423072882|ref|ZP_17061631.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Desulfitobacterium hafniense DP7]
gi|361856377|gb|EHL08284.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Desulfitobacterium hafniense DP7]
Length = 1016
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+F +LAVDD + +++ RL Y V +G +ALE L ++ S + +L
Sbjct: 686 GKFTLLAVDDDSANLQVLARLFANEPYNVLWATNGLEALELL-------KSRSDI---DL 735
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
++ D MP M+GY++ R+I+ SL ++PV++++ + P I + GA +F +KP
Sbjct: 736 VLLDVMMPRMSGYEVCREIRRQFSLFELPVILLTVRHSPGDIAAGFKAGANDFMIKPFDA 795
Query: 127 ADV 129
+V
Sbjct: 796 LEV 798
>gi|219667618|ref|YP_002458053.1| signal transduction histidine kinase LytS [Desulfitobacterium
hafniense DCB-2]
gi|219537878|gb|ACL19617.1| signal transduction histidine kinase, LytS [Desulfitobacterium
hafniense DCB-2]
Length = 1016
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+F +LAVDD + +++ RL Y V +G +ALE L ++ S + +L
Sbjct: 686 GKFTLLAVDDDSANLQVLARLFANEPYNVLWATNGLEALELL-------KSRSDI---DL 735
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
++ D MP M+GY++ R+I+ SL ++PV++++ + P I + GA +F +KP
Sbjct: 736 VLLDVMMPRMSGYEVCREIRRQFSLFELPVILLTVRHSPGDIAAGFKAGANDFMIKPFDA 795
Query: 127 ADV 129
+V
Sbjct: 796 LEV 798
>gi|71909506|ref|YP_287093.1| response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt [Dechloromonas aromatica RCB]
gi|71849127|gb|AAZ48623.1| Response regulator receiver:CheW-like protein:ATP-binding region,
ATPase-like:Hpt [Dechloromonas aromatica RCB]
Length = 1866
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 15/115 (13%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV--NLII 68
V+ VDDS+ RK+ RLL YQV G ALE Q+I V ++I+
Sbjct: 1745 VMVVDDSLTVRKITSRLLMREGYQVILAKDGVDALE-------------QLIDVMPDVIL 1791
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+D MP M G+DL+R I+ L+ +P+++++S N LE GA + KP
Sbjct: 1792 SDIEMPRMDGFDLVRNIRAEERLRSVPIIMITSRTADKHRNYALEIGANHYLGKP 1846
>gi|359484783|ref|XP_002270833.2| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 712
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 12/128 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD L++ LL+ YQVT N+A+ L +L E++ +L+I+D
Sbjct: 26 VLAVDDDPTCLMLLDGLLRRCQYQVTTT---NQAITALKMLRENKNN------FDLVISD 76
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL + D+PV+++SS + P + R + GA ++ LKPV++ ++
Sbjct: 77 VSMPDMDGFKLLELVGLEM---DLPVIMLSSHSDPKLVMRGITHGACDYLLKPVRIEELK 133
Query: 131 KLKPHLMK 138
+ H+++
Sbjct: 134 NIWQHVIR 141
>gi|159184846|ref|NP_354624.2| two component response regulator [Agrobacterium fabrum str. C58]
gi|159140130|gb|AAK87409.2| two component response regulator [Agrobacterium fabrum str. C58]
Length = 249
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+T+ + HVL VDDS R L+ LK +++V+ DSG KALE L N D
Sbjct: 108 FLTNHRHHVLIVDDSPTARALLSSRLKRYNFRVSLADSGAKALEILR-ANPD-------- 158
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+ L++TDY MP + G++L R+I+ ++ ++ +SS R L+ G +F L+
Sbjct: 159 -IGLVVTDYNMPDIDGFELTRRIRTVRGSHELRIIGVSSSTNRLLSARFLKAGGNDFMLR 217
Query: 123 P 123
P
Sbjct: 218 P 218
>gi|375104696|ref|ZP_09750957.1| diguanylate cyclase (GGDEF) domain-containing protein
[Burkholderiales bacterium JOSHI_001]
gi|374665427|gb|EHR70212.1| diguanylate cyclase (GGDEF) domain-containing protein
[Burkholderiales bacterium JOSHI_001]
Length = 746
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 11/120 (9%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
D +VL VDD ++ L L+ + +T DSG KAL+ LG D
Sbjct: 9 DPVANVLLVDDDAVNLLLTSVALRERGFHITEADSGEKALDLLGSETPD----------- 57
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
+++ D MPG+ G++ R++++ ++PV++++ + INR + GA +FF+K Q
Sbjct: 58 IVVLDAMMPGLDGFETCRRLRQLPGFDNMPVLMLTGLDDDVSINRAYQAGATDFFVKATQ 117
>gi|359463376|ref|ZP_09251939.1| two-component hybrid histidine kinase sensor and regulator
[Acaryochloris sp. CCMEE 5410]
Length = 358
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 12/117 (10%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
++LAVDD + L++ +L+++ Y++ DSG AL Q Q +L+I
Sbjct: 13 YILAVDDMPDNLMLLKMMLESAGYRIVLADSGPAAL-----------AQIQKAQPDLVIL 61
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
D MPGM+GY++ + I+ L IP++++S+ S + + L+ GA++F KPV+L
Sbjct: 62 DVMMPGMSGYEVTQTIRNDPQLPYIPILLISAHE-RSSVVKGLDAGADDFIRKPVEL 117
>gi|39996140|ref|NP_952091.1| response receiver histidine kinase [Geobacter sulfurreducens PCA]
gi|409911583|ref|YP_006890048.1| response receiver histidine kinase [Geobacter sulfurreducens KN400]
gi|39982905|gb|AAR34364.1| response receiver histidine kinase [Geobacter sulfurreducens PCA]
gi|307634791|gb|ADI83878.2| response receiver histidine kinase [Geobacter sulfurreducens KN400]
Length = 513
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 11/129 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + RK++ L S Y+V + G +A+E L+ D L++ D
Sbjct: 23 ILLVDDDAVTRKMLRNLFTLSGYRVADAEDGARAVEMFRELSPD-----------LVLLD 71
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY I+ + +P++IM++ + + I R + GA +F KPV +N
Sbjct: 72 IMMPVMDGYGACAAIRGLPGGEHVPIIIMTALDDANSIGRAFDAGATDFIEKPVNWMLLN 131
Query: 131 KLKPHLMKG 139
P+L++
Sbjct: 132 HRLPYLLRA 140
>gi|195604808|gb|ACG24234.1| two-component response regulator-like PRR73 [Zea mays]
Length = 765
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V++ R+++ LL+ Y+V ++G A +L ED Q N ++L++
Sbjct: 82 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYL----EDLQNN-----IDLVL 132
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ M ++G LL KI KDIPV++MS+ + S + +CL +GA +F +KP++ +
Sbjct: 133 TEVFMTCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNE 192
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 193 LKNLWQHVWR 202
>gi|124003289|ref|ZP_01688139.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
gi|123991387|gb|EAY30818.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
Length = 1269
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 79/140 (56%), Gaps = 10/140 (7%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
++ Q +L VDD ++ +++E L +Y +T G KAL+ ++ E ++
Sbjct: 881 SNYQVKILVVDDEPVNLQVLENHLSIQNYNITQASDGLKALK---IIKESKEP------F 931
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
++I+ D MP M+GY++ R I+E L ++PV++++++N P I + GA ++ KP
Sbjct: 932 DIILLDVMMPKMSGYEVCRTIRERFPLVELPVLMLTAKNQPKDIVEGFDAGANDYLTKPF 991
Query: 125 QLAD-VNKLKPHLMKGISKE 143
+ ++++K H++ ++ E
Sbjct: 992 SKVELLSRIKTHVLLKLTSE 1011
>gi|456359114|dbj|BAM93386.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 33 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 83
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 84 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 143
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 144 KNLWAHVWR 152
>gi|404328912|ref|ZP_10969360.1| two component sensor histidine kinase YwpD [Sporolactobacillus
vineae DSM 21990 = SL153]
Length = 1020
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD+ + K++ +L+ Y V AV G +AL DE ++ + +L+I D
Sbjct: 699 ILVVDDNTDNLKVLIDMLEGIPYNVIAVKDGREAL--------DEVAHTPL---DLVILD 747
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPGM+GYD+ RKI+ES SL D+PV+++++ I + GA + KP ++ +
Sbjct: 748 LMMPGMSGYDVCRKIRESYSLTDLPVLMLTAAIINDDKHFAFRAGANDILQKPYNFSEFS 807
>gi|303246120|ref|ZP_07332401.1| response regulator receiver modulated CheW protein [Desulfovibrio
fructosovorans JJ]
gi|302492516|gb|EFL52387.1| response regulator receiver modulated CheW protein [Desulfovibrio
fructosovorans JJ]
Length = 329
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKT-SSYQVTAVDSGNKALEFL-GLLNEDEQTNSQVI 62
D HVL VDD I R++++R L+ S+ V + DSG +AL L G L E ++ V
Sbjct: 182 ADRSIHVLHVDDQAIVRRMVKRALEQDESFTVESADSGQEALAMLQGKLAEAKEKGCAVT 241
Query: 63 Q-VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
VN++++D MP M GY L R IK++ L +PV + SS +++ A+ F
Sbjct: 242 DLVNVVVSDVEMPVMDGYTLCRSIKDNPELARLPVYLFSSLITEETLHKGQSVKADGQFP 301
Query: 122 KP 123
KP
Sbjct: 302 KP 303
>gi|118638651|gb|ABL09481.1| pseudo-response regulator [Aegilops tauschii]
Length = 661
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 34 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 84
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 85 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 144
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 145 KNLWAHVWR 153
>gi|254485790|ref|ZP_05098995.1| response regulator [Roseobacter sp. GAI101]
gi|214042659|gb|EEB83297.1| response regulator [Roseobacter sp. GAI101]
Length = 408
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 77/145 (53%), Gaps = 19/145 (13%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS + R+++ L ++V SG++ALE ++ +L+I+D
Sbjct: 4 VLVVDDSKLQRRILSASLTRWGFEVVEAASGDEALE-----------QCRIRLPDLVISD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+ MPGM G R ++ ++ + ++++S++ + + + L+ GA++F KPV DV+
Sbjct: 53 WVMPGMNGLQFCRAFRDLSNFQYGYFILLTSKSEKAEVAKGLDNGADDFLSKPV---DVH 109
Query: 131 KLKPHLMKG-----ISKEIKEPNNI 150
+L+ + G + +E+ E N I
Sbjct: 110 ELRARITAGERILDMQRELTEKNRI 134
>gi|18414032|ref|NP_568107.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
gi|52783235|sp|Q93WK5.1|APRR7_ARATH RecName: Full=Two-component response regulator-like APRR7; AltName:
Full=Pseudo-response regulator 7
gi|10281004|dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thaliana]
gi|14532638|gb|AAK64047.1| unknown protein [Arabidopsis thaliana]
gi|23296600|gb|AAN13129.1| unknown protein [Arabidopsis thaliana]
gi|332003137|gb|AED90520.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
Length = 727
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ SY+V +G +A + L LN +++++T+
Sbjct: 80 VLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNN---------HIDIVLTE 130
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI S ++IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 131 VIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELK 190
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 191 ILWQHVWR 198
>gi|456359140|dbj|BAM93399.1| pseudo-response regulator [Triticum urartu]
gi|456359142|dbj|BAM93400.1| pseudo-response regulator [Triticum urartu]
gi|456359144|dbj|BAM93401.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|118638644|gb|ABL09478.1| pseudo-response regulator [Triticum aestivum]
gi|118638646|gb|ABL09479.1| pseudo-response regulator [Triticum aestivum]
gi|118638648|gb|ABL09480.1| pseudo-response regulator [Triticum aestivum]
gi|395759125|dbj|BAM31259.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 34 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 84
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 85 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 144
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 145 KNLWAHVWR 153
>gi|118638642|gb|ABL09477.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 34 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 84
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 85 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 144
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 145 KNLWAHVWR 153
>gi|383934860|ref|ZP_09988299.1| two-component system, chemotaxis family, response regulator CheY
[Rheinheimera nanhaiensis E407-8]
gi|383703991|dbj|GAB58390.1| two-component system, chemotaxis family, response regulator CheY
[Rheinheimera nanhaiensis E407-8]
Length = 127
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 12/123 (9%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSY-QVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
D +L VDD R++I+ LL+ + V+ D G+ AL L Q
Sbjct: 2 DKNMKILVVDDFSTMRRIIKNLLRDLGFTNVSEADDGSTALPML-----------QNGDF 50
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+ ++TD+ MPGM G DLLR I+ A LK IPV+++++E +I + G + +KP
Sbjct: 51 DFVVTDWNMPGMQGIDLLRAIRADAKLKHIPVLMVTAEAKKEQIIAAAQAGVNGYIVKPF 110
Query: 125 QLA 127
A
Sbjct: 111 TAA 113
>gi|316935701|ref|YP_004110683.1| Fis family two component sigma54 specific transcriptional regulator
[Rhodopseudomonas palustris DX-1]
gi|315603415|gb|ADU45950.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris DX-1]
Length = 495
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 21/152 (13%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L DD + R+L+E +++ Y+ VDSG+ A++ L T ++ ++
Sbjct: 4 RILIADDDAVQRRLVENMVQKCGYETITVDSGDAAVDAL--------TAPDSPAIDAVVL 55
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV----- 124
D MPG+ G +L KI+ AS D+PV++ ++ + + GA +F +KPV
Sbjct: 56 DLVMPGLDGLGVLSKIR--ASGIDVPVIVQTAHGGIDNVVSAMRAGAHDFVVKPVGIERL 113
Query: 125 QLADVNKLKPHLMKGISKEIKEPNNINNKRKG 156
Q++ N L MKG E I + R+G
Sbjct: 114 QVSLRNALNASAMKG------ELQRIRHAREG 139
>gi|160897023|ref|YP_001562605.1| CheA signal transduction histidine kinase [Delftia acidovorans SPH-1]
gi|160362607|gb|ABX34220.1| CheA signal transduction histidine kinase [Delftia acidovorans SPH-1]
Length = 2137
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDSI R++ +RLL+ Y+V G +A+E L E+ T L+++D
Sbjct: 1989 VLVVDDSITVRRVTQRLLQREGYRVALAADGLQAMERLA---EERPT--------LVLSD 2037
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M G+DLLR I+ +L+D+PVV+++S + GA + KP
Sbjct: 2038 IEMPRMDGFDLLRNIRADEALRDLPVVMITSRIAQKHREMARQLGANHYLGKP 2090
>gi|379025576|dbj|BAL63565.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025578|dbj|BAL63566.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025580|dbj|BAL63567.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025582|dbj|BAL63568.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359194|dbj|BAM93426.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359196|dbj|BAM93427.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359220|dbj|BAM93439.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359222|dbj|BAM93440.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 MFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|379025574|dbj|BAL63564.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 MFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|333916552|ref|YP_004490284.1| CheA signal transduction histidine kinase [Delftia sp. Cs1-4]
gi|333746752|gb|AEF91929.1| CheA signal transduction histidine kinase [Delftia sp. Cs1-4]
Length = 2140
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDSI R++ +RLL+ Y+V G +A+E L E+ T L+++D
Sbjct: 1995 VLVVDDSITVRRVTQRLLQREGYRVALAADGLQAMERLA---EERPT--------LVLSD 2043
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M G+DLLR I+ +L+D+PVV+++S + GA + KP
Sbjct: 2044 IEMPRMDGFDLLRNIRADEALRDLPVVMITSRIAQKHREMARQLGANHYLGKP 2096
>gi|15614110|ref|NP_242413.1| hypothetical protein BH1547 [Bacillus halodurans C-125]
gi|10174164|dbj|BAB05266.1| BH1547 [Bacillus halodurans C-125]
Length = 661
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 11/119 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD ++ K+I +L +Y+V V SG +A+ L D L++ D
Sbjct: 332 ILVVDDEPVNLKVIASILANEAYEVKTVISGEEAIAVLDTKEWD-----------LVVAD 380
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MP M+GY+L + I++ +L ++P++++++ + P I GA ++ KPV L ++
Sbjct: 381 VMMPKMSGYELTKNIRQRFTLTELPILLITARSRPEDIENGFRAGANDYLTKPVNLLEL 439
>gi|389579963|ref|ZP_10169990.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfobacter postgatei 2ac9]
gi|389401598|gb|EIM63820.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfobacter postgatei 2ac9]
Length = 141
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ +L VDDS+ R +++R L + Y + + + E L +L + V+LI
Sbjct: 2 SYSILIVDDSMPMRTVLKRSLAAAGYGGSRILEASNGKEALTVLKGE--------WVDLI 53
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+TDY MP M G L+ +K A K+IPV+++S+E S+I ++ GA + KP
Sbjct: 54 MTDYNMPEMNGLSFLKTVKTEALFKEIPVIVISTEGNDSKIKEFIDTGAAGYITKP 109
>gi|312283507|dbj|BAJ34619.1| unnamed protein product [Thellungiella halophila]
Length = 539
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 78/137 (56%), Gaps = 15/137 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD +++E LL Y VT D AL+ LL E++ + +L+I+D
Sbjct: 16 VLAVDDDQTCLRILETLLHRCQYHVTTTDQAQTALK---LLRENKN------KFDLVISD 66
Query: 71 YCMPGMTGYDLLRKIKESASLK-DIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MP M G+ LL E L+ D+PV+++S+ + P + + ++ GA ++ LKPV++ ++
Sbjct: 67 VDMPDMDGFKLL----ELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEEL 122
Query: 130 NKLKPHLM-KGISKEIK 145
+ H++ KG K++K
Sbjct: 123 KNIWQHVVRKGKFKKMK 139
>gi|291571978|dbj|BAI94250.1| adenylate cyclase [Arthrospira platensis NIES-39]
Length = 344
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 11/112 (9%)
Query: 12 LAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDY 71
+ VDD+ I+R L+ R L+ Y V +G +AL+ + + ++L++ D
Sbjct: 1 MIVDDNEINRDLLARRLQKQGYDVLVASNGFEALKIM-----------RSTPLDLVLLDI 49
Query: 72 CMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M GY +L +K L+ IPV+++S+ N I RC+E GAE++ KP
Sbjct: 50 MMPQMNGYQVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLSKP 101
>gi|456359266|dbj|BAM93462.1| pseudo-response regulator [Triticum dicoccoides]
Length = 659
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 37 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 87
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 88 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 147
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 148 KNLWAHVWR 156
>gi|456359186|dbj|BAM93422.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 37 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 87
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 88 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 147
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 148 KNLWAHVWR 156
>gi|456359104|dbj|BAM93381.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359106|dbj|BAM93382.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359108|dbj|BAM93383.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359116|dbj|BAM93387.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 33 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 83
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 84 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 143
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 144 KNLWAHVWR 152
>gi|456359102|dbj|BAM93380.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 33 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 83
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 84 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 143
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 144 KNLWAHVWR 152
>gi|379025890|dbj|BAL63722.1| pseudo-response regulator [Triticum dicoccoides]
Length = 660
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 38 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 88
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 89 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 148
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 149 KNLWAHVWR 157
>gi|384419210|ref|YP_005628570.1| two-component system sensor-response regulator hybrid protein RpfC
[Xanthomonas oryzae pv. oryzicola BLS256]
gi|353462123|gb|AEQ96402.1| two-component system sensor-response regulator hybrid protein RpfC
[Xanthomonas oryzae pv. oryzicola BLS256]
Length = 725
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 68/121 (56%), Gaps = 13/121 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD +R +++RLL+ + ++V V+ + L+ + +ED + +I D
Sbjct: 463 MLVADDHEANRMVLQRLLEKAGHRVMCVNGAEQVLD--AMADED---------FDAVIVD 511
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
MPGM+G D+L++++ +++ ++ PVV++S++ P I C + GA F KPV A
Sbjct: 512 LHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARRFLAKPVVAAK 571
Query: 129 V 129
+
Sbjct: 572 L 572
>gi|456359120|dbj|BAM93389.1| pseudo-response regulator [Triticum urartu]
gi|456359122|dbj|BAM93390.1| pseudo-response regulator [Triticum urartu]
gi|456359124|dbj|BAM93391.1| pseudo-response regulator [Triticum urartu]
gi|456359126|dbj|BAM93392.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|444425569|ref|ZP_21221007.1| histidine kinase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444241169|gb|ELU52697.1| histidine kinase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 313
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD I+R L +R + V SG +A+E L E Q+++ + NL+ITD
Sbjct: 82 VLVVDDDAINRLLFKRQFEKLGVNCQLVASGLEAIEAL----EQAQSDNVLAPFNLVITD 137
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY L + +K + L I VV ++EN + I + + G E KP L+++
Sbjct: 138 CHMPDMDGYQLTQALKANKVLASITVVTCTAENSRNVIEKAEQSGIETVLFKPYTLSELQ 197
Query: 131 KL-KPHLMKGISKEIKE 146
L + +L + I+ E +E
Sbjct: 198 ALCEQYLSRVINAESQE 214
>gi|312115283|ref|YP_004012879.1| response regulator receiver protein [Rhodomicrobium vannielii ATCC
17100]
gi|311220412|gb|ADP71780.1| response regulator receiver protein [Rhodomicrobium vannielii ATCC
17100]
Length = 130
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
+ F +L VDD +++ +LLK Y V +G ALE + Q NS
Sbjct: 3 ASFKILVVDDYSTMVRIVRKLLKQIGYDDVDEASNGGMALEMI-------QKNSY----G 51
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
LII+D+ M M+GYDLLR ++ SA+ P +++++E+ + E GA E+ +KP
Sbjct: 52 LIISDWNMEPMSGYDLLRHVRSSAATAQTPFILVTAESRADNVAAAKEAGANEYLVKP 109
>gi|220904650|ref|YP_002479962.1| response regulator receiver protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868949|gb|ACL49284.1| response regulator receiver protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 122
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
H++ VDDS R L+ +LK ++V+ + G A+E L L+ V+LI++
Sbjct: 4 HIMVVDDSKTIRNLVAFVLKGEGFKVSTAEDGLDAIEKLYSLDP----------VDLIVS 53
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
D MP M G+ ++ I+ + KDIP++++S+E I + GA + +KP Q
Sbjct: 54 DVNMPRMDGFTFIKTIRAQDAYKDIPIIVLSTEGQEKDIQTGMSLGANLYMVKPAQ 109
>gi|423073142|ref|ZP_17061885.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Desulfitobacterium hafniense DP7]
gi|361855972|gb|EHL07906.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Desulfitobacterium hafniense DP7]
Length = 702
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+F +L VDD + K + +L + Y VT +G AL L +L
Sbjct: 372 GEFSILVVDDEFSNLKALMNILTLNQYNVTVAINGEAALHLL----------KGAFHYDL 421
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
I D MPG++GY++ RKI+E+ S ++P+++++++ +P + GA +F KP ++
Sbjct: 422 CILDVMMPGISGYEVCRKIRETYSPLELPILLLTAKALPEDMEAGFRAGANDFIEKPFEV 481
Query: 127 ADV 129
++
Sbjct: 482 REL 484
>gi|224370414|ref|YP_002604578.1| two-component transcriptional regulatory protein [Desulfobacterium
autotrophicum HRM2]
gi|223693131|gb|ACN16414.1| two-component transcriptional regulatory protein [Desulfobacterium
autotrophicum HRM2]
Length = 368
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 85/160 (53%), Gaps = 20/160 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + +L+E LL Y+V V++G ALE L + I ++I+ D
Sbjct: 10 ILVVDDEPRNLRLMEALLIPMGYRVQLVENGEAALELL-----------EKISPDVILLD 58
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPVQLADV 129
MPGM GY++ R++K + +P+V++++ + R+ + LE GA++F KPV ++
Sbjct: 59 VMMPGMDGYEVARQVKSREKTRSVPIVMVTALREVTDRV-KALEAGADDFLTKPVDKTEL 117
Query: 130 NKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTR 169
L+K + +++ N +K E+++A RTR
Sbjct: 118 TARVRSLVKVKAYH----DHMTNYQK---ELEAAVERRTR 150
>gi|456359164|dbj|BAM93411.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 37 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 87
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 88 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 147
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 148 KNLWAHVWR 156
>gi|456359146|dbj|BAM93402.1| pseudo-response regulator [Triticum urartu]
gi|456359148|dbj|BAM93403.1| pseudo-response regulator [Triticum urartu]
gi|456359150|dbj|BAM93404.1| pseudo-response regulator [Triticum urartu]
gi|456359152|dbj|BAM93405.1| pseudo-response regulator [Triticum urartu]
gi|456359154|dbj|BAM93406.1| pseudo-response regulator [Triticum urartu]
gi|456359156|dbj|BAM93407.1| pseudo-response regulator [Triticum urartu]
gi|456359158|dbj|BAM93408.1| pseudo-response regulator [Triticum urartu]
gi|456359160|dbj|BAM93409.1| pseudo-response regulator [Triticum urartu]
gi|456359162|dbj|BAM93410.1| pseudo-response regulator [Triticum urartu]
gi|456359166|dbj|BAM93412.1| pseudo-response regulator [Triticum urartu]
gi|456359168|dbj|BAM93413.1| pseudo-response regulator [Triticum urartu]
gi|456359170|dbj|BAM93414.1| pseudo-response regulator [Triticum urartu]
gi|456359172|dbj|BAM93415.1| pseudo-response regulator [Triticum urartu]
gi|456359174|dbj|BAM93416.1| pseudo-response regulator [Triticum urartu]
gi|456359176|dbj|BAM93417.1| pseudo-response regulator [Triticum urartu]
gi|456359178|dbj|BAM93418.1| pseudo-response regulator [Triticum urartu]
gi|456359180|dbj|BAM93419.1| pseudo-response regulator [Triticum urartu]
gi|456359182|dbj|BAM93420.1| pseudo-response regulator [Triticum urartu]
gi|456359184|dbj|BAM93421.1| pseudo-response regulator [Triticum urartu]
gi|456359188|dbj|BAM93423.1| pseudo-response regulator [Triticum urartu]
gi|456359190|dbj|BAM93424.1| pseudo-response regulator [Triticum urartu]
gi|456359192|dbj|BAM93425.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 37 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 87
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 88 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 147
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 148 KNLWAHVWR 156
>gi|456359128|dbj|BAM93393.1| pseudo-response regulator [Triticum urartu]
gi|456359130|dbj|BAM93394.1| pseudo-response regulator [Triticum urartu]
gi|456359132|dbj|BAM93395.1| pseudo-response regulator [Triticum urartu]
gi|456359134|dbj|BAM93396.1| pseudo-response regulator [Triticum urartu]
gi|456359136|dbj|BAM93397.1| pseudo-response regulator [Triticum urartu]
gi|456359138|dbj|BAM93398.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|163846813|ref|YP_001634857.1| histidine kinase [Chloroflexus aurantiacus J-10-fl]
gi|222524634|ref|YP_002569105.1| PAS/PAC sensor hybrid histidine kinase [Chloroflexus sp. Y-400-fl]
gi|163668102|gb|ABY34468.1| Histidine kinase [Chloroflexus aurantiacus J-10-fl]
gi|222448513|gb|ACM52779.1| PAS/PAC sensor hybrid histidine kinase [Chloroflexus sp. Y-400-fl]
Length = 537
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+D + LI L+ Y+V V+SG +AL ++ Q LI+ D
Sbjct: 420 LLMVEDDVASATLIADYLRRCGYRVVHVESGEEALAYI-----------QGELPCLILLD 468
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
+ M+G+++++ ++ + +D+PV+++++ +P RCLE GA+E+ KP++L
Sbjct: 469 VRLRTMSGFEVMQHLRSQVATRDLPVLVLTALAMPGDRERCLEAGADEYLAKPIRL 524
>gi|443320023|ref|ZP_21049155.1| diguanylate cyclase (GGDEF) domain-containing protein [Gloeocapsa
sp. PCC 73106]
gi|442790255|gb|ELR99856.1| diguanylate cyclase (GGDEF) domain-containing protein [Gloeocapsa
sp. PCC 73106]
Length = 586
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + +IE L YQ+ DSG++A+ L +L D LI+ D
Sbjct: 6 ILIVDDEPDNFDVIEAFLSGQDYQLHYADSGSEAIASLNILQPD-----------LILLD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MPG G +L R+IK K +P+V++++ + RCL+ GA++F KP
Sbjct: 55 VMMPGTDGIELCRRIKAMPQWKSVPIVMVTALAGKQTLARCLDVGADDFISKP 107
>gi|354567654|ref|ZP_08986822.1| response regulator receiver protein [Fischerella sp. JSC-11]
gi|353542112|gb|EHC11576.1| response regulator receiver protein [Fischerella sp. JSC-11]
Length = 147
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQ--VTAVDSGNKALEFLGLLNEDEQTNSQ 60
M T +L V+DS D ++++RL++ + Q + SG++ L++L ++ +S+
Sbjct: 1 MATKLNEPLLVVEDSNEDFRMLQRLMRRMAVQNPIHRCTSGDEVLDYLYQEGKNPDGSSR 60
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
++I+ D +PG+ G D+L ++K+ S K+IP+VI ++ + P I C ++GA +
Sbjct: 61 P---SVILLDLNLPGIDGRDILEQLKQDQSFKEIPIVIFTTSSNPKDIEFCYQKGANGYL 117
Query: 121 LKPVQLADVNK 131
+KP+ + ++ K
Sbjct: 118 VKPMDVQELQK 128
>gi|326424324|ref|NP_762903.2| response regulator [Vibrio vulnificus CMCP6]
gi|319999710|gb|AAO07893.2| Response regulator [Vibrio vulnificus CMCP6]
Length = 364
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS + + + L ++ Y V A SG AL L EQ +++L++ D
Sbjct: 11 VLIVDDSADNLAFMAQGL-SNRYHVKAAKSGEMALHIL------EQ-----FEIDLVLLD 58
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV- 129
MP ++GYD++RKI+ + +DIPVV ++ ++ P E GA ++ KPV + +
Sbjct: 59 IVMPELSGYDVIRKIRANHKTQDIPVVFLTGKDSPEDEKLGFELGAADYIHKPVSIPLLR 118
Query: 130 NKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTR 167
+++K HL SK+ N +++ L+ DR +
Sbjct: 119 SRVKTHLQNKRSKDFLRDQNGYLEKEVLKRSHELDRMQ 156
>gi|113477434|ref|YP_723495.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110168482|gb|ABG53022.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 351
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 11/114 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+VL VDD+ +R L+ R +K + +++ G +ALE + + +S +L++
Sbjct: 7 NVLVVDDNQFNRDLLARRVKRQGHMISSASDGFQALEMV-------RNHS----FDLVLL 55
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D MP M GY +L +K +L+ IPV+++S+ + I RC+E GAE++ KP
Sbjct: 56 DIMMPQMNGYQVLETLKADPALRHIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|78047475|ref|YP_363650.1| sensory/regulatory protein RpfC [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346724803|ref|YP_004851472.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv.
citrumelo F1]
gi|78035905|emb|CAJ23596.1| sensory/regulatory protein RpfC [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346649550|gb|AEO42174.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 726
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 13/121 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD +R +++RLL+ + ++V V+ + L+ + ED + +I D
Sbjct: 464 MLVADDHEANRMVLQRLLEKAGHKVACVNGAEQVLD--AMAEED---------FDAVIVD 512
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
MPGM+G D+L++++ +++ ++ PVV++S++ P I C + GA F KPV A
Sbjct: 513 LHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAK 572
Query: 129 V 129
+
Sbjct: 573 L 573
>gi|379026042|dbj|BAL63798.1| pseudo-response regulator [Triticum durum]
Length = 665
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 38 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 88
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 89 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 148
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 149 KNLWAHVWR 157
>gi|379025768|dbj|BAL63661.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025770|dbj|BAL63662.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025894|dbj|BAL63724.1| pseudo-response regulator [Triticum turanicum]
gi|379025896|dbj|BAL63725.1| pseudo-response regulator [Triticum turanicum]
gi|379025898|dbj|BAL63726.1| pseudo-response regulator [Triticum turanicum]
gi|379025900|dbj|BAL63727.1| pseudo-response regulator [Triticum turanicum]
gi|379025902|dbj|BAL63728.1| pseudo-response regulator [Triticum turanicum]
gi|379025910|dbj|BAL63732.1| pseudo-response regulator [Triticum polonicum]
gi|379025936|dbj|BAL63745.1| pseudo-response regulator [Triticum carthlicum]
gi|379026026|dbj|BAL63790.1| pseudo-response regulator [Triticum durum]
gi|379026028|dbj|BAL63791.1| pseudo-response regulator [Triticum durum]
gi|379026030|dbj|BAL63792.1| pseudo-response regulator [Triticum durum]
gi|379026032|dbj|BAL63793.1| pseudo-response regulator [Triticum durum]
gi|379026034|dbj|BAL63794.1| pseudo-response regulator [Triticum durum]
gi|379026036|dbj|BAL63795.1| pseudo-response regulator [Triticum durum]
gi|379026038|dbj|BAL63796.1| pseudo-response regulator [Triticum durum]
gi|379026040|dbj|BAL63797.1| pseudo-response regulator [Triticum durum]
gi|379026044|dbj|BAL63799.1| pseudo-response regulator [Triticum durum]
gi|379026046|dbj|BAL63800.1| pseudo-response regulator [Triticum durum]
gi|379026048|dbj|BAL63801.1| pseudo-response regulator [Triticum durum]
gi|379026050|dbj|BAL63802.1| pseudo-response regulator [Triticum durum]
gi|379026052|dbj|BAL63803.1| pseudo-response regulator [Triticum durum]
gi|379026054|dbj|BAL63804.1| pseudo-response regulator [Triticum durum]
gi|379026056|dbj|BAL63805.1| pseudo-response regulator [Triticum durum]
gi|379026058|dbj|BAL63806.1| pseudo-response regulator [Triticum durum]
gi|379026060|dbj|BAL63807.1| pseudo-response regulator [Triticum durum]
gi|379026072|dbj|BAL63813.1| pseudo-response regulator [Triticum durum]
gi|379026074|dbj|BAL63814.1| pseudo-response regulator [Triticum durum]
gi|379026076|dbj|BAL63815.1| pseudo-response regulator [Triticum durum]
gi|379026078|dbj|BAL63816.1| pseudo-response regulator [Triticum durum]
gi|379026080|dbj|BAL63817.1| pseudo-response regulator [Triticum durum]
gi|456359288|dbj|BAM93473.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 665
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 38 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 88
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 89 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 148
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 149 KNLWAHVWR 157
>gi|226310343|ref|YP_002770237.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
gi|226093291|dbj|BAH41733.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
Length = 1067
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+LA+DD ++ ++++R+L +S YQ+T S AL+ L E Q +L+I D
Sbjct: 732 ILAIDDDPVNLRVLDRMLSSSHYQITTCASPRDALDLL--FTE---------QWDLLIID 780
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MP M+GY+L ++++E S+ ++P++++++ + + GA ++ KPV
Sbjct: 781 VMMPHMSGYELTQRVREHFSVSELPILLLTARSQSEDVYTGYLSGANDYVCKPV 834
>gi|456359092|dbj|BAM93375.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359094|dbj|BAM93376.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359096|dbj|BAM93377.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359098|dbj|BAM93378.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359100|dbj|BAM93379.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359224|dbj|BAM93441.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 MFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|456359072|dbj|BAM93365.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359074|dbj|BAM93366.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359076|dbj|BAM93367.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359078|dbj|BAM93368.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359080|dbj|BAM93369.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359082|dbj|BAM93370.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359084|dbj|BAM93371.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359086|dbj|BAM93372.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359088|dbj|BAM93373.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 668
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 MFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|225439773|ref|XP_002275837.1| PREDICTED: two-component response regulator-like APRR7 [Vitis
vinifera]
gi|297741496|emb|CBI32628.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R +I LL+ YQVT +G +A L + +N ++L++T+
Sbjct: 60 VLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRIL-----KDTSN----HIDLVLTE 110
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++G LL KI + K+IPV++MS+ + + + +CL +GA +F +KPV+ ++
Sbjct: 111 VNLPRLSGIALLCKIMNHKTRKNIPVIMMSTHDSGALVLKCLSKGATDFLVKPVRKNELK 170
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 171 FLWQHIWR 178
>gi|269960017|ref|ZP_06174394.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835316|gb|EEZ89398.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 1200
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
Q VL VDD I+R L +R + SG++A+E L + Q + ++LI
Sbjct: 966 QGRVLVVDDDAINRLLFKRQFEKLGVCCQLAASGSEAIELL----KQAQDDDVFAPISLI 1021
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
I+D MP M GY L +K+K S+ +P+V ++EN + I + + G E KP L
Sbjct: 1022 ISDCHMPDMDGYQLTQKLKASSEFASLPIVGCTAENSRNVIEKAEQNGMESVLFKPYNLD 1081
Query: 128 DVNKL-KPHLMKGISKEIK 145
D+ L + +L S E +
Sbjct: 1082 DLKTLCEQYLAMSFSSETQ 1100
>gi|297568710|ref|YP_003690054.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfurivibrio alkaliphilus AHT2]
gi|296924625|gb|ADH85435.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfurivibrio alkaliphilus AHT2]
Length = 530
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 66/113 (58%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD +R+++ R L+ Y V ++G +AL L +T + +L++ D
Sbjct: 171 ILVVDDITANREVLSRRLRRLGYLVMEAENGRQALAML-------ETGA----FDLVLLD 219
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP + GY++LR+IK + ++ +PV+++S+ + + RCLE GA+++ KP
Sbjct: 220 ILMPELDGYEVLRRIKANELIRHVPVLMISAVGDINSVVRCLEAGADDYLAKP 272
>gi|113474512|ref|YP_720573.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110165560|gb|ABG50100.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 1133
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+ + FHVL VDD I+ +++ LK ++YQVT SG +AL L E+
Sbjct: 717 IPNGDFHVLVVDDEPINIQVLNNYLKANNYQVTQALSGKEALAAL----ENNHN------ 766
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+LI+ D MP M+GY++ +I+E + +PV++++++N + + + GA ++ KP
Sbjct: 767 FDLILLDVMMPNMSGYEVCSQIREKYPAQSLPVLMLTAKNQIADLVMGFQFGANDYLTKP 826
>gi|117924807|ref|YP_865424.1| response regulator receiver modulated diguanylate cyclase with
PAS/PAC sensor [Magnetococcus marinus MC-1]
gi|117608563|gb|ABK44018.1| response regulator receiver modulated diguanylate cyclase with
PAS/PAC sensor [Magnetococcus marinus MC-1]
Length = 571
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAV-DSGNKALEFLGLLNEDEQTNS-----QVIQ 63
H+ VDDS DR L+ R+L + Y + DSG L+ LGL D + +
Sbjct: 2 HIAIVDDSPDDRLLLMRILSKAGYSTLQLHDSGEAFLQTLGLTPTDTASIAPFNPPHTSL 61
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
++I D MP M G +LR++K + ++IPV++++ + P + EEGA ++ KP
Sbjct: 62 PDIIFMDVMMPDMDGLSVLRQLKANPPTQNIPVIMVTGNDRPRDLAHAFEEGATDYITKP 121
Query: 124 V-------QLADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADR 165
+ +L + KL+ + + S E + + + +GL +D+A R
Sbjct: 122 IRRVELLARLRSIIKLERAMQQVRSSEKRLRDLTASLGEGLLSVDNAQR 170
>gi|358455253|ref|ZP_09165481.1| transcriptional regulator, SARP family [Frankia sp. CN3]
gi|357081506|gb|EHI90937.1| transcriptional regulator, SARP family [Frankia sp. CN3]
Length = 459
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 6/119 (5%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
D + VL VDD+ I+R+L+ + ++V ++G++ALE L ++D +
Sbjct: 297 ADRRGRVLVVDDTAINRRLLASAVAQLGHEVETAENGHRALEMLRAADDDPRG------F 350
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
++++ D MP + GY L +IK L D+PV+++S+ + RC+E GA ++ KP
Sbjct: 351 DIVLLDLLMPVLDGYATLAEIKADPVLADVPVIMVSAVPELESVVRCIELGAIDYLPKP 409
>gi|428227133|ref|YP_007111230.1| multi-sensor hybrid histidine kinase [Geitlerinema sp. PCC 7407]
gi|427987034|gb|AFY68178.1| multi-sensor hybrid histidine kinase [Geitlerinema sp. PCC 7407]
Length = 1019
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD +R +I LL ++VT +G + + + D Q + L+ITD
Sbjct: 818 ILVVDDKWENRSVISNLLTPIGFEVTEAVNGKEGWQKIC----DRQPD-------LVITD 866
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD-V 129
MP + G++L+R+I++ + KD+ +++ S+ + R E G +F KP+ ++ +
Sbjct: 867 LIMPDINGFELIRQIRQEEAFKDLIIIVSSASVFEADQYRSTEAGGNDFLAKPILASELL 926
Query: 130 NKLKPHL-MKGISKE-IKEPNNINN 152
KL+ HL + I +E I EP ++N
Sbjct: 927 KKLQTHLHLTWIYEEQIPEPQGVSN 951
>gi|386392678|ref|ZP_10077459.1| chemotaxis signal transduction protein [Desulfovibrio sp. U5L]
gi|385733556|gb|EIG53754.1| chemotaxis signal transduction protein [Desulfovibrio sp. U5L]
Length = 329
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLL--NEDEQTNSQVI 62
T S++ L DDS++ R++++ LL+ + + VTAV +G A E L + D++
Sbjct: 186 TTSRYRALVADDSVLVREMLKDLLQKAGFDVTAVQNGRDAWELLLQIKGKSDDEKRPLSD 245
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSS 101
V++++ D MP M G++L ++IKE LK +PV++ SS
Sbjct: 246 YVHVMVADIEMPAMDGHNLTKRIKEDPVLKHLPVILFSS 284
>gi|379025858|dbj|BAL63706.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 38 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 88
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 89 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 148
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 149 KNLWAHVWR 157
>gi|379025856|dbj|BAL63705.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025860|dbj|BAL63707.1| pseudo-response regulator [Triticum dicoccoides]
gi|379026014|dbj|BAL63784.1| pseudo-response regulator [Triticum durum]
gi|379026016|dbj|BAL63785.1| pseudo-response regulator [Triticum durum]
gi|379026018|dbj|BAL63786.1| pseudo-response regulator [Triticum durum]
gi|379026020|dbj|BAL63787.1| pseudo-response regulator [Triticum durum]
gi|379026022|dbj|BAL63788.1| pseudo-response regulator [Triticum durum]
gi|379026024|dbj|BAL63789.1| pseudo-response regulator [Triticum durum]
gi|456359268|dbj|BAM93463.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 38 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 88
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 89 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 148
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 149 KNLWAHVWR 157
>gi|379025682|dbj|BAL63618.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|375108956|ref|ZP_09755210.1| response regulator receiver protein [Alishewanella jeotgali KCTC
22429]
gi|393761417|ref|ZP_10350054.1| response regulator receiver protein [Alishewanella agri BL06]
gi|374571142|gb|EHR42271.1| response regulator receiver protein [Alishewanella jeotgali KCTC
22429]
gi|392607427|gb|EIW90301.1| response regulator receiver protein [Alishewanella agri BL06]
Length = 127
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 12/123 (9%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
D +L VDD R++I+ LL+ + ++ D G+ AL L Q
Sbjct: 2 DKNMKILVVDDFSTMRRIIKNLLRDLGFTNISEADDGSTALPML-----------QGGDF 50
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+ ++TD+ MPGM G DLLR I+ A LK IPV+++++E +I + G + +KP
Sbjct: 51 DFVVTDWNMPGMQGIDLLRAIRADAKLKHIPVLMVTAEAKKEQIIAAAQAGVNGYIVKPF 110
Query: 125 QLA 127
A
Sbjct: 111 TAA 113
>gi|284041387|ref|YP_003391317.1| multi-sensor hybrid histidine kinase [Spirosoma linguale DSM 74]
gi|283820680|gb|ADB42518.1| multi-sensor hybrid histidine kinase [Spirosoma linguale DSM 74]
Length = 863
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 13/127 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+D+++++KL+ ++LK YQ D G KA++ L Q ++I+ D
Sbjct: 611 VLVVEDNLMNQKLVLQVLKHLGYQGQVADDGRKAIDIL-----------QKDTFDIILMD 659
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY+ R I+ + +P++ M++ +PS CL+ G +F KP Q+ ++
Sbjct: 660 LQMPVMDGYETTRYIRSKIN-TTVPIIAMTAHALPSEKEECLKAGMNDFLSKPFQIEELQ 718
Query: 131 KL-KPHL 136
L +P L
Sbjct: 719 LLIRPFL 725
>gi|456359262|dbj|BAM93460.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 38 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 88
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 89 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 148
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 149 KNLWAHVWR 157
>gi|89893206|ref|YP_516693.1| hypothetical protein DSY0460 [Desulfitobacterium hafniense Y51]
gi|219666479|ref|YP_002456914.1| signal transduction histidine kinase LytS [Desulfitobacterium
hafniense DCB-2]
gi|89332654|dbj|BAE82249.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536739|gb|ACL18478.1| signal transduction histidine kinase, LytS [Desulfitobacterium
hafniense DCB-2]
Length = 1018
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+F +L VDD + K + +L + Y VT +G AL L +L
Sbjct: 688 GEFSILVVDDEFSNLKALMNILTLNQYNVTVAINGEAALHLL----------KGAFHYDL 737
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
I D MPG++GY++ RKI+E+ S ++P+++++++ +P + GA +F KP ++
Sbjct: 738 CILDVMMPGISGYEVCRKIRETYSPLELPILLLTAKALPEDMEAGFRAGANDFIEKPFEV 797
Query: 127 ADV 129
++
Sbjct: 798 REL 800
>gi|379025526|dbj|BAL63540.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|379025506|dbj|BAL63530.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025508|dbj|BAL63531.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025510|dbj|BAL63532.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|325282623|ref|YP_004255164.1| response regulator receiver protein [Deinococcus proteolyticus MRP]
gi|324314432|gb|ADY25547.1| response regulator receiver protein [Deinococcus proteolyticus MRP]
Length = 152
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 9 FHVLAVDDSIIDRKLIERLLK--TSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
F +L V+D D +L + LL + +V + +G +AL++L L E++ ++ NL
Sbjct: 9 FCLLLVEDEQADAELFQELLGEVAAHTKVIHMGNGQEALDYLQRLGEEQPGEQPRLRPNL 68
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
I+ D MP M G+ L K+ LKDIPV+++S+ + + R + A + +KP
Sbjct: 69 IVLDLNMPVMNGHAFLEHAKKDEGLKDIPVLVLSTSDHADDVQRAYQAHASGYLVKPTSF 128
Query: 127 ADVNKL 132
+ ++
Sbjct: 129 QEYTEM 134
>gi|159154683|gb|ABW93669.1| pseudo-response regulator [Triticum turgidum]
gi|379025504|dbj|BAL63529.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025524|dbj|BAL63539.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025530|dbj|BAL63542.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025532|dbj|BAL63543.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025536|dbj|BAL63545.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025544|dbj|BAL63549.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025546|dbj|BAL63550.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025548|dbj|BAL63551.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025550|dbj|BAL63552.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025552|dbj|BAL63553.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025554|dbj|BAL63554.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025556|dbj|BAL63555.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025558|dbj|BAL63556.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025560|dbj|BAL63557.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025562|dbj|BAL63558.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025564|dbj|BAL63559.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025642|dbj|BAL63598.1| pseudo-response regulator [Triticum durum]
gi|379025766|dbj|BAL63660.1| pseudo-response regulator [Triticum durum]
gi|456359070|dbj|BAM93364.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359090|dbj|BAM93374.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359200|dbj|BAM93429.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
gi|456359202|dbj|BAM93430.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359210|dbj|BAM93434.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359212|dbj|BAM93435.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359218|dbj|BAM93438.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|325925186|ref|ZP_08186599.1| Signal transduction histidine kinase [Xanthomonas perforans 91-118]
gi|325544440|gb|EGD15810.1| Signal transduction histidine kinase [Xanthomonas perforans 91-118]
Length = 719
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 13/121 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD +R +++RLL+ + ++V V+ + L+ + ED + +I D
Sbjct: 457 MLVADDHEANRMVLQRLLEKAGHKVACVNGAEQVLD--AMAEED---------FDAVIVD 505
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
MPGM+G D+L++++ +++ ++ PVV++S++ P I C + GA F KPV A
Sbjct: 506 LHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAK 565
Query: 129 V 129
+
Sbjct: 566 L 566
>gi|255565035|ref|XP_002523510.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223537217|gb|EEF38849.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 676
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 82/148 (55%), Gaps = 12/148 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD I K+++ LLK YQVT N+A++ L +L E+ + +L+I+D
Sbjct: 20 VLAVDDDPICLKVLDTLLKKCQYQVTTT---NQAIQALKMLRENRN------KYDLVISD 70
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL + D+PV+++S+ + + + + GA ++ LKPV++ ++
Sbjct: 71 VNMPDMDGFKLLELVGLEM---DLPVIMLSAHSDKELVYKGVTHGAVDYLLKPVRIEELK 127
Query: 131 KLKPHLMKGISKEIKEPNNINNKRKGLE 158
+ H+++ + K+ + N+ K L+
Sbjct: 128 NIWQHVIRRKKLQPKDQSRSQNQDKPLD 155
>gi|354565137|ref|ZP_08984312.1| response regulator receiver protein [Fischerella sp. JSC-11]
gi|353549096|gb|EHC18538.1| response regulator receiver protein [Fischerella sp. JSC-11]
Length = 121
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+DSI R++I LLK S VT G +ALE + Q+ +L++ D
Sbjct: 4 VLIVEDSIAQREMITDLLKASGLTVTHATDGVEALEAI-----------QIAPPDLVVLD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY++ R++K +++PVV+ SS+ +++GA+ + KP Q ++
Sbjct: 53 IVMPRMNGYEVCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPTELV 112
Query: 131 KLKPHLMKG 139
L++G
Sbjct: 113 GTVKQLLRG 121
>gi|395647561|ref|ZP_10435411.1| putative sensory box GGDEF/EAL domain-containing protein
[Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 413
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 13/116 (11%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD RKL+E LL+ YQ + SG +AL+ + D LI+ D
Sbjct: 8 LLIVDDEPQIRKLLETLLQHEGYQTMSAGSGEEALDLIAQRLPD-----------LILLD 56
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPVQ 125
MPGM GY++ ++K + IP++++S+ +RIN L+ GAEEF KPV+
Sbjct: 57 IMMPGMDGYEVASQLKGDETTASIPIIMLSALSESSARIN-GLQTGAEEFISKPVE 111
>gi|373458372|ref|ZP_09550139.1| response regulator receiver protein [Caldithrix abyssi DSM 13497]
gi|371720036|gb|EHO41807.1| response regulator receiver protein [Caldithrix abyssi DSM 13497]
Length = 705
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+DS+ R IE+ L +++T +G ALE + EQ + +LI++D
Sbjct: 5 ILVVEDSLAQRFFIEKALAGDGFKITTAANGKLALEKI-----HEQ------KPDLILSD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
MP M G +L + +K L+ IPVV+M++ N P I + +E GA+ FLK
Sbjct: 54 IMMPEMNGMELCKAVKSHPQLQTIPVVLMTTLNEPKEIIKIIECGADYLFLK 105
Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
++ VL +D+ +++KL+ +LK + +QV +G +A+E +
Sbjct: 574 SEPALKVLVAEDNRVNQKLMISILKRAGFQVELARNGKEAVELF-----------RQKPF 622
Query: 65 NLIITDYCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+L++ D MP M GY R+++ E S K P+ +++ + I L+ G + K
Sbjct: 623 DLVLMDMQMPVMDGYTATREMRKLEEESGKHTPIFALTASDDAREIEGALKAGVDMVLRK 682
Query: 123 P 123
P
Sbjct: 683 P 683
>gi|125561252|gb|EAZ06700.1| hypothetical protein OsI_28947 [Oryza sativa Indica Group]
Length = 116
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 29/99 (29%)
Query: 34 QVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKD 93
+VTAV+S +AL FL D + + VN+I++DYCMP MTGYDLL
Sbjct: 43 RVTAVESVMQALVFL-----DSEHD-----VNMIVSDYCMPEMTGYDLL----------- 81
Query: 94 IPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKL 132
M+SE RI +C + GA+++ LKPV++ADV ++
Sbjct: 82 -----MASEE---RIRKCFDGGAKDYILKPVKIADVPRI 112
>gi|379025516|dbj|BAL63535.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359206|dbj|BAM93432.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|84570627|dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lemna paucicostata]
Length = 501
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R ++ LL+ SY V AV G KA + + E+ N ++I+++
Sbjct: 75 VLLVEPDDCTRHIVTALLRKCSYHVAAVADGIKAWDIV------EEKN---FNFDIILSE 125
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P +G +LL KI + + IPV++MSS++ S + +C+++GA +F +KPV+ ++
Sbjct: 126 VEVPSFSGINLLSKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELR 185
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 186 NLWQHVWR 193
>gi|297621214|ref|YP_003709351.1| transcriptional regulator [Waddlia chondrophila WSU 86-1044]
gi|297376515|gb|ADI38345.1| putative transcriptional regulator [Waddlia chondrophila WSU
86-1044]
gi|337293439|emb|CCB91428.1| putative transcriptional regulator [Waddlia chondrophila 2032/99]
Length = 129
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T ++ +L V+D I+ ++I +LK V +G +AL+ + D
Sbjct: 1 MTKQEYRILVVEDHFINLEMISEMLKRLGCIVDTASNGKEALDCVTKNFYDA-------- 52
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
I D MP M GY+ R I+E + + IP++ +++ ++ S ++RCLE G + + KP
Sbjct: 53 ---IFMDLQMPVMDGYETTRLIREDKTRQKIPIIALTANHVKSDLDRCLESGMDGYLTKP 109
Query: 124 VQLADVNK-LKPHL 136
+L D+N LK +L
Sbjct: 110 FELKDLNNVLKKYL 123
>gi|379025940|dbj|BAL63747.1| pseudo-response regulator [Triticum carthlicum]
gi|456359264|dbj|BAM93461.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 37 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 87
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 88 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 147
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 148 KNLWAHVWR 156
>gi|379025862|dbj|BAL63708.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 37 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 87
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 88 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 147
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 148 KNLWAHVWR 156
>gi|379025838|dbj|BAL63696.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025840|dbj|BAL63697.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025842|dbj|BAL63698.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025844|dbj|BAL63699.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 661
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 37 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 87
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 88 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 147
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 148 KNLWAHVWR 156
>gi|379025778|dbj|BAL63666.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 37 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 87
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 88 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 147
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 148 KNLWAHVWR 156
>gi|379025744|dbj|BAL63649.1| pseudo-response regulator [Triticum durum]
gi|379025748|dbj|BAL63651.1| pseudo-response regulator [Triticum durum]
gi|379025762|dbj|BAL63658.1| pseudo-response regulator [Triticum durum]
gi|379025764|dbj|BAL63659.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|346320308|gb|EGX89909.1| autoinducer 2 sensor kinase/phosphatase luxQ [Cordyceps militaris
CM01]
Length = 1379
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+ FH+L V+D+ +++K+ R ++ +QVTA +G +ALE+ +L E N+ + ++
Sbjct: 1101 AAFHILVVEDNAVNQKIATRTIRKLGFQVTATWNGREALEY--VLGASEGRNA---KPDI 1155
Query: 67 IITDYCMPGMTGY---DLLRKIKESASL-KDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
I+ D MP + GY L+R + L D+P+V M++ I +C + G +++ K
Sbjct: 1156 ILMDVQMPIIDGYKCTHLMRHHRPYKGLIHDVPIVAMTASAIQGDREKCKKAGMDDYLAK 1215
Query: 123 PVQLADVNKL 132
PV ++ + ++
Sbjct: 1216 PVTMSILERM 1225
>gi|326390489|ref|ZP_08212046.1| response regulator receiver protein [Thermoanaerobacter ethanolicus
JW 200]
gi|325993457|gb|EGD51892.1| response regulator receiver protein [Thermoanaerobacter ethanolicus
JW 200]
Length = 266
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
++L VDDS++ R + + +L+ Y V + +A+ + N ++ +L+I
Sbjct: 9 NILVVDDSVLIRLMAKNILEAEGYDVETAATAEEAI--FKVKNREKL-------FDLVIV 59
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D +P G++ ++K+K A K+IPV+I+S + P I +E GA E+ +KP + A++
Sbjct: 60 DINLPNQNGFEFIQKLKSQAEYKNIPVMILSGDATPVSIKEAVEVGAVEYLIKPFKAAEL 119
Query: 130 NKLKPHLMKGISKEIKEP 147
K L+ I +E P
Sbjct: 120 VKRVVKLIGYIKEEDHYP 137
>gi|118638628|gb|ABL09470.1| pseudo-response regulator [Triticum aestivum]
gi|118638630|gb|ABL09471.1| pseudo-response regulator [Triticum aestivum]
gi|118638632|gb|ABL09472.1| pseudo-response regulator [Triticum aestivum]
gi|118638634|gb|ABL09473.1| pseudo-response regulator [Triticum aestivum]
gi|118638636|gb|ABL09474.1| pseudo-response regulator [Triticum aestivum]
gi|118638638|gb|ABL09475.1| pseudo-response regulator [Triticum aestivum]
gi|118638640|gb|ABL09476.1| pseudo-response regulator [Triticum aestivum]
gi|159138015|gb|ABW89014.1| pseudo-response regulator [Triticum turgidum]
gi|159138017|gb|ABW89015.1| pseudo-response regulator [Triticum turgidum]
gi|159138019|gb|ABW89016.1| pseudo-response regulator [Triticum turgidum]
gi|159138021|gb|ABW89017.1| pseudo-response regulator [Triticum turgidum]
gi|379025772|dbj|BAL63663.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025774|dbj|BAL63664.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025776|dbj|BAL63665.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025780|dbj|BAL63667.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025782|dbj|BAL63668.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025784|dbj|BAL63669.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025786|dbj|BAL63670.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025788|dbj|BAL63671.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025790|dbj|BAL63672.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025792|dbj|BAL63673.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025794|dbj|BAL63674.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025796|dbj|BAL63675.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025800|dbj|BAL63677.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025802|dbj|BAL63678.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025804|dbj|BAL63679.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025806|dbj|BAL63680.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025808|dbj|BAL63681.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025810|dbj|BAL63682.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025812|dbj|BAL63683.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025814|dbj|BAL63684.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025816|dbj|BAL63685.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025818|dbj|BAL63686.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025820|dbj|BAL63687.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025822|dbj|BAL63688.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025824|dbj|BAL63689.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025826|dbj|BAL63690.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025828|dbj|BAL63691.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025830|dbj|BAL63692.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025832|dbj|BAL63693.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025834|dbj|BAL63694.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025836|dbj|BAL63695.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025850|dbj|BAL63702.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025852|dbj|BAL63703.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025854|dbj|BAL63704.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025864|dbj|BAL63709.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025866|dbj|BAL63710.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025868|dbj|BAL63711.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025870|dbj|BAL63712.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025872|dbj|BAL63713.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025874|dbj|BAL63714.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025876|dbj|BAL63715.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025878|dbj|BAL63716.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025880|dbj|BAL63717.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025882|dbj|BAL63718.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025884|dbj|BAL63719.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025886|dbj|BAL63720.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025888|dbj|BAL63721.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025892|dbj|BAL63723.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025912|dbj|BAL63733.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025914|dbj|BAL63734.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025916|dbj|BAL63735.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025918|dbj|BAL63736.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025920|dbj|BAL63737.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025922|dbj|BAL63738.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025926|dbj|BAL63740.1| pseudo-response regulator [Triticum turgidum]
gi|379025928|dbj|BAL63741.1| pseudo-response regulator [Triticum turgidum]
gi|379025930|dbj|BAL63742.1| pseudo-response regulator [Triticum turgidum]
gi|379025932|dbj|BAL63743.1| pseudo-response regulator [Triticum turgidum]
gi|379025934|dbj|BAL63744.1| pseudo-response regulator [Triticum carthlicum]
gi|379025938|dbj|BAL63746.1| pseudo-response regulator [Triticum carthlicum]
gi|379025942|dbj|BAL63748.1| pseudo-response regulator [Triticum carthlicum]
gi|379025944|dbj|BAL63749.1| pseudo-response regulator [Triticum durum]
gi|379025946|dbj|BAL63750.1| pseudo-response regulator [Triticum durum]
gi|379025948|dbj|BAL63751.1| pseudo-response regulator [Triticum durum]
gi|379025950|dbj|BAL63752.1| pseudo-response regulator [Triticum durum]
gi|379025952|dbj|BAL63753.1| pseudo-response regulator [Triticum durum]
gi|379025954|dbj|BAL63754.1| pseudo-response regulator [Triticum durum]
gi|379025956|dbj|BAL63755.1| pseudo-response regulator [Triticum durum]
gi|379025958|dbj|BAL63756.1| pseudo-response regulator [Triticum durum]
gi|379025960|dbj|BAL63757.1| pseudo-response regulator [Triticum durum]
gi|379025962|dbj|BAL63758.1| pseudo-response regulator [Triticum durum]
gi|379025964|dbj|BAL63759.1| pseudo-response regulator [Triticum durum]
gi|379025966|dbj|BAL63760.1| pseudo-response regulator [Triticum durum]
gi|379025968|dbj|BAL63761.1| pseudo-response regulator [Triticum durum]
gi|379025970|dbj|BAL63762.1| pseudo-response regulator [Triticum durum]
gi|379025972|dbj|BAL63763.1| pseudo-response regulator [Triticum durum]
gi|379025974|dbj|BAL63764.1| pseudo-response regulator [Triticum durum]
gi|379025976|dbj|BAL63765.1| pseudo-response regulator [Triticum durum]
gi|379025978|dbj|BAL63766.1| pseudo-response regulator [Triticum durum]
gi|379025980|dbj|BAL63767.1| pseudo-response regulator [Triticum durum]
gi|379025982|dbj|BAL63768.1| pseudo-response regulator [Triticum durum]
gi|379025984|dbj|BAL63769.1| pseudo-response regulator [Triticum durum]
gi|379025986|dbj|BAL63770.1| pseudo-response regulator [Triticum durum]
gi|379025988|dbj|BAL63771.1| pseudo-response regulator [Triticum durum]
gi|379025990|dbj|BAL63772.1| pseudo-response regulator [Triticum durum]
gi|379025992|dbj|BAL63773.1| pseudo-response regulator [Triticum durum]
gi|379025994|dbj|BAL63774.1| pseudo-response regulator [Triticum durum]
gi|379025996|dbj|BAL63775.1| pseudo-response regulator [Triticum durum]
gi|379025998|dbj|BAL63776.1| pseudo-response regulator [Triticum durum]
gi|379026000|dbj|BAL63777.1| pseudo-response regulator [Triticum durum]
gi|379026002|dbj|BAL63778.1| pseudo-response regulator [Triticum durum]
gi|379026004|dbj|BAL63779.1| pseudo-response regulator [Triticum durum]
gi|379026006|dbj|BAL63780.1| pseudo-response regulator [Triticum durum]
gi|379026008|dbj|BAL63781.1| pseudo-response regulator [Triticum durum]
gi|379026010|dbj|BAL63782.1| pseudo-response regulator [Triticum durum]
gi|379026012|dbj|BAL63783.1| pseudo-response regulator [Triticum durum]
gi|379026062|dbj|BAL63808.1| pseudo-response regulator [Triticum durum]
gi|379026064|dbj|BAL63809.1| pseudo-response regulator [Triticum durum]
gi|379026066|dbj|BAL63810.1| pseudo-response regulator [Triticum durum]
gi|379026068|dbj|BAL63811.1| pseudo-response regulator [Triticum durum]
gi|379026070|dbj|BAL63812.1| pseudo-response regulator [Triticum durum]
gi|379026084|dbj|BAL63819.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|383215300|gb|AFG73164.1| pseudo-response regulator [Triticum aestivum]
gi|395759121|dbj|BAM31257.1| pseudo-response regulator [Triticum aestivum]
gi|395759123|dbj|BAM31258.1| pseudo-response regulator [Triticum aestivum]
gi|456359244|dbj|BAM93451.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359246|dbj|BAM93452.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359270|dbj|BAM93464.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359272|dbj|BAM93465.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359274|dbj|BAM93466.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359276|dbj|BAM93467.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359278|dbj|BAM93468.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359280|dbj|BAM93469.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359282|dbj|BAM93470.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359284|dbj|BAM93471.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359286|dbj|BAM93472.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 664
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 37 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 87
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 88 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 147
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 148 KNLWAHVWR 156
>gi|456359204|dbj|BAM93431.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|379025742|dbj|BAL63648.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|325922143|ref|ZP_08183933.1| Signal transduction histidine kinase [Xanthomonas gardneri ATCC
19865]
gi|325547378|gb|EGD18442.1| Signal transduction histidine kinase [Xanthomonas gardneri ATCC
19865]
Length = 724
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 13/121 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD +R +++RLL+ + ++V V+ + L+ + ED + +I D
Sbjct: 462 MLVADDHEANRMVLQRLLEKAGHKVRCVNGAEQVLD--AMAEED---------FDAVIVD 510
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
MPGM+G D+L++++ +++ ++ PVV++S++ P I C + GA F KPV A
Sbjct: 511 LHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPDAIRTCEQAGARAFLAKPVVAAK 570
Query: 129 V 129
+
Sbjct: 571 L 571
>gi|298493029|ref|YP_003723206.1| response regulator receiver protein ['Nostoc azollae' 0708]
gi|298234947|gb|ADI66083.1| response regulator receiver protein ['Nostoc azollae' 0708]
Length = 121
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+DSI R++I LLK S VT G +ALE + Q +L++ D
Sbjct: 4 VLIVEDSIAQREMITDLLKASGLTVTHAGDGVEALEAI-----------QSTPPDLVVLD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M GY+L R++K +++PVV+ SS+ +++GA+ + KP Q ++
Sbjct: 53 IVMPRMNGYELCRRLKSDPKTQNVPVVMCSSKGEEFDRYWGMKQGADAYIAKPFQPTELV 112
Query: 131 KLKPHLMKG 139
L++G
Sbjct: 113 GTVKQLLRG 121
>gi|379025520|dbj|BAL63537.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025522|dbj|BAL63538.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359208|dbj|BAM93433.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|313672616|ref|YP_004050727.1| response regulator receiver protein [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939372|gb|ADR18564.1| response regulator receiver protein [Calditerrivibrio nitroreducens
DSM 19672]
Length = 120
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 65/114 (57%), Gaps = 11/114 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DDSI +R+ I ++L ++V V+ G+KA+E L + + + I+ D
Sbjct: 4 ILVADDSITEREFIRKILVGEGHEVVTVEDGDKAIEKL-----------RADKFDCILLD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
MPG G+ + R IK+ K+IPV++++S+ S +++GA+++ +KPV
Sbjct: 53 VVMPGKNGFQICRDIKKDDFTKNIPVILITSKGQDSDKFWGMKQGADDYLVKPV 106
>gi|428312293|ref|YP_007123270.1| family 3 adenylate cyclase [Microcoleus sp. PCC 7113]
gi|428253905|gb|AFZ19864.1| family 3 adenylate cyclase [Microcoleus sp. PCC 7113]
Length = 353
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 11/116 (9%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
Q VL VDD+ +R L+ R ++ + VT + G KALE + D L+
Sbjct: 5 QGRVLVVDDNEANRDLLARRVRRQGHTVTVAEDGIKALELMAQEPFD-----------LV 53
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+ D MP M GY +L +K +L+ IPV+++S+ + + + C+E GAE++ KP
Sbjct: 54 LLDIMMPKMNGYQVLEHLKNDPNLRHIPVIVISAVDDINSVVECIELGAEDYLPKP 109
>gi|183220320|ref|YP_001838316.1| chemotactic two-component response regulator CheY [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
gi|189910437|ref|YP_001961992.1| response regulator receiver domain-containing protein [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167775113|gb|ABZ93414.1| Response regulator receiver domain [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167778742|gb|ABZ97040.1| Chemotactic two-component response regulator CheY [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 126
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 10/115 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS K++ L + +++ SG A+E L ++N ++ L I D
Sbjct: 4 ILIVDDSPAVLKIVRLALSSQGHEIIICQSGESAIETL-------KSNPKI---KLGIFD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
+ MPG++G DL+R+ K+ + + ++++SSEN P I++ L EGA+ +F+KP +
Sbjct: 54 FNMPGLSGLDLIRETKKIKTNSKLKILVLSSENKPEIISKALLEGADGWFIKPFK 108
>gi|345886077|ref|ZP_08837351.1| hypothetical protein HMPREF0178_00125 [Bilophila sp. 4_1_30]
gi|345040822|gb|EGW45046.1| hypothetical protein HMPREF0178_00125 [Bilophila sp. 4_1_30]
Length = 616
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 11 VLAVDDSIID-RKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
VL VDD + R L+ +L Y++ SG KALE++G D L++
Sbjct: 10 VLVVDDDPTNLRILVSKL--NREYRLGVAKSGTKALEYMGKQIPD-----------LVLL 56
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP M GY + IK L DIPVV +S + PS+ R E G ++ KP A+V
Sbjct: 57 DVMMPDMDGYAVCEHIKRDPRLCDIPVVFISYVDDPSQKTRGFEVGGVDYITKPFHDAEV 116
Query: 130 -NKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTI 174
+++ H+M +K+++E +N G +E+D R L D +
Sbjct: 117 LARVRTHIM---NKQMREQLKRHNAEIG-KELDEHRRQLLALLDNL 158
>gi|359447585|ref|ZP_09237176.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20439]
gi|358038576|dbj|GAA73425.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20439]
Length = 311
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 12/113 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD ++R ++E+ L + +++ V SG +AL F+ + QV+LII D
Sbjct: 7 ILIVDDDALNRIILEKTL-SDEHEIYLVTSGEEALAFV-----------KHTQVDLIILD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MPGM GYD+L ++KES+ IP++ +S+ + + LE GA ++ +KP
Sbjct: 55 IMMPGMNGYDVLVELKESSLSHAIPIIFISANSSHEDEAKGLELGAMDYIVKP 107
>gi|443479083|ref|ZP_21068740.1| response regulator receiver protein [Pseudanabaena biceps PCC 7429]
gi|443015498|gb|ELS30420.1| response regulator receiver protein [Pseudanabaena biceps PCC 7429]
Length = 240
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
F VL VDD+ I+R ++ R L +Q++ +G +A+E +Q +L++
Sbjct: 6 FQVLIVDDNEINRDMLARRLHRRDFQISMAVNGREAIEM-----------AQKNLYDLVL 54
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D MP + GY +L +K+ + L+DIPV+++S+ + +C+E GA+++ KP
Sbjct: 55 LDIMMPELDGYAVLTYLKKDSRLRDIPVIMISAIEEMGSVMKCMEIGADDYLTKP 109
>gi|443311958|ref|ZP_21041580.1| chemotaxis protein histidine kinase-like protein [Synechocystis sp.
PCC 7509]
gi|442778033|gb|ELR88304.1| chemotaxis protein histidine kinase-like protein [Synechocystis sp.
PCC 7509]
Length = 892
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDSI RKL+++LL S YQV G +A+E L N +L+I+D
Sbjct: 774 ILIVDDSIAVRKLLDQLLSKSGYQVMQCRDGKEAVEVL---------NRSGDFYDLVISD 824
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M G+ LLR+I+ S + ++PV +++S + GA +F KP
Sbjct: 825 IEMPRMDGFTLLREIRTSKNWSNLPVAMLTSRENDQHRQKAKALGANAYFTKP 877
>gi|379025798|dbj|BAL63676.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 37 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 87
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 88 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 147
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 148 KNLWAHVWR 156
>gi|379025736|dbj|BAL63645.1| pseudo-response regulator [Triticum durum]
gi|379025738|dbj|BAL63646.1| pseudo-response regulator [Triticum durum]
gi|379025740|dbj|BAL63647.1| pseudo-response regulator [Triticum durum]
gi|379025746|dbj|BAL63650.1| pseudo-response regulator [Triticum durum]
gi|379025750|dbj|BAL63652.1| pseudo-response regulator [Triticum durum]
gi|379025752|dbj|BAL63653.1| pseudo-response regulator [Triticum durum]
gi|379025754|dbj|BAL63654.1| pseudo-response regulator [Triticum durum]
gi|379025756|dbj|BAL63655.1| pseudo-response regulator [Triticum durum]
gi|379025758|dbj|BAL63656.1| pseudo-response regulator [Triticum durum]
gi|379025760|dbj|BAL63657.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|379025488|dbj|BAL63521.1| pseudo-response regulator [Triticum polonicum]
gi|379025734|dbj|BAL63644.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|288556153|ref|YP_003428088.1| chemotaxis protein CheV [Bacillus pseudofirmus OF4]
gi|288547313|gb|ADC51196.1| Chemotaxis protein CheV (CheW-REC domains) [Bacillus pseudofirmus
OF4]
Length = 302
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSY-QVTAVDSGNKALEFLGLLN-EDEQTN 58
+G S ++ +DS + RKL+ + L + Y QVT ++G +AL++L L DE T
Sbjct: 167 LGRRERSHKKIVVAEDSAMLRKLLHQTLAEAGYEQVTFFENGKEALDYLEYLQTSDEHTV 226
Query: 59 SQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEE 118
+ +V L+ITD MP M G L R+IKE K IPV+I SS ++ + GA+
Sbjct: 227 EE--EVQLVITDLEMPKMDGLHLTRRIKEDDDFKRIPVIIFSSLITDDLYHKGITVGADR 284
Query: 119 FFLKP 123
KP
Sbjct: 285 QVSKP 289
>gi|260221321|emb|CBA29767.1| hypothetical protein Csp_A13800 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 318
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI--QVNLII 68
+L DDS I R L+E LKT +AV +G +A E LG ++ D + + +V L++
Sbjct: 188 ILFADDSAIARMLVEESLKTMGVAYSAVKNGKEAWERLGQIHSDAVNHGKRAKDKVALVL 247
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK--PVQL 126
TD MP M G+ L R IK + IPV++ SS + GA+ + K P +L
Sbjct: 248 TDLEMPEMDGFTLTRSIKNDSRFAGIPVIVYSSLTGSASEGHASGVGADAYVAKFEPNEL 307
Query: 127 ADVNKLKPHLMKG 139
A N + L +G
Sbjct: 308 A--NAISTTLTRG 318
>gi|118638616|gb|ABL09464.1| pseudo-response regulator [Triticum aestivum]
gi|118638620|gb|ABL09466.1| pseudo-response regulator [Triticum aestivum]
gi|118638622|gb|ABL09467.1| pseudo-response regulator [Triticum aestivum]
gi|379025454|dbj|BAL63504.1| pseudo-response regulator [Triticum turgidum]
gi|379025456|dbj|BAL63505.1| pseudo-response regulator [Triticum turgidum]
gi|379025458|dbj|BAL63506.1| pseudo-response regulator [Triticum turgidum]
gi|379025460|dbj|BAL63507.1| pseudo-response regulator [Triticum turgidum]
gi|379025462|dbj|BAL63508.1| pseudo-response regulator [Triticum turgidum]
gi|379025464|dbj|BAL63509.1| pseudo-response regulator [Triticum carthlicum]
gi|379025466|dbj|BAL63510.1| pseudo-response regulator [Triticum carthlicum]
gi|379025468|dbj|BAL63511.1| pseudo-response regulator [Triticum carthlicum]
gi|379025470|dbj|BAL63512.1| pseudo-response regulator [Triticum carthlicum]
gi|379025472|dbj|BAL63513.1| pseudo-response regulator [Triticum carthlicum]
gi|379025474|dbj|BAL63514.1| pseudo-response regulator [Triticum turanicum]
gi|379025476|dbj|BAL63515.1| pseudo-response regulator [Triticum turanicum]
gi|379025478|dbj|BAL63516.1| pseudo-response regulator [Triticum turanicum]
gi|379025482|dbj|BAL63518.1| pseudo-response regulator [Triticum turanicum]
gi|379025490|dbj|BAL63522.1| pseudo-response regulator [Triticum polonicum]
gi|379025492|dbj|BAL63523.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025494|dbj|BAL63524.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025496|dbj|BAL63525.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025498|dbj|BAL63526.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025500|dbj|BAL63527.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025502|dbj|BAL63528.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025512|dbj|BAL63533.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025514|dbj|BAL63534.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025518|dbj|BAL63536.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025528|dbj|BAL63541.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025534|dbj|BAL63544.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025538|dbj|BAL63546.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025540|dbj|BAL63547.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025568|dbj|BAL63561.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025570|dbj|BAL63562.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025572|dbj|BAL63563.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025698|dbj|BAL63626.1| pseudo-response regulator [Triticum durum]
gi|379025700|dbj|BAL63627.1| pseudo-response regulator [Triticum durum]
gi|379025702|dbj|BAL63628.1| pseudo-response regulator [Triticum durum]
gi|379025704|dbj|BAL63629.1| pseudo-response regulator [Triticum durum]
gi|379025706|dbj|BAL63630.1| pseudo-response regulator [Triticum durum]
gi|379025708|dbj|BAL63631.1| pseudo-response regulator [Triticum durum]
gi|379025710|dbj|BAL63632.1| pseudo-response regulator [Triticum durum]
gi|379025712|dbj|BAL63633.1| pseudo-response regulator [Triticum durum]
gi|379025714|dbj|BAL63634.1| pseudo-response regulator [Triticum durum]
gi|379025716|dbj|BAL63635.1| pseudo-response regulator [Triticum durum]
gi|379025718|dbj|BAL63636.1| pseudo-response regulator [Triticum durum]
gi|379025720|dbj|BAL63637.1| pseudo-response regulator [Triticum durum]
gi|379025722|dbj|BAL63638.1| pseudo-response regulator [Triticum durum]
gi|379025724|dbj|BAL63639.1| pseudo-response regulator [Triticum durum]
gi|379025726|dbj|BAL63640.1| pseudo-response regulator [Triticum durum]
gi|379025728|dbj|BAL63641.1| pseudo-response regulator [Triticum durum]
gi|379025730|dbj|BAL63642.1| pseudo-response regulator [Triticum durum]
gi|379025732|dbj|BAL63643.1| pseudo-response regulator [Triticum durum]
gi|395759117|dbj|BAM31255.1| pseudo-response regulator [Triticum aestivum]
gi|395759119|dbj|BAM31256.1| pseudo-response regulator [Triticum aestivum]
gi|456359198|dbj|BAM93428.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 668
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+ R+++ LL+ YQV ++G++A +L +D Q+N ++L++T+
Sbjct: 40 VLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL----QDMQSN-----IDLVLTE 90
Query: 71 YCM-PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
M G++G DLL +I KDIPV++MSS + + CL GA +F KP++ ++
Sbjct: 91 VFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNEL 150
Query: 130 NKLKPHLMK 138
L H+ +
Sbjct: 151 KNLWAHVWR 159
>gi|294675080|ref|YP_003575696.1| sensor histidine kinase/DNA-binding response regulator [Prevotella
ruminicola 23]
gi|294473361|gb|ADE82750.1| sensor histidine kinase/DNA-binding response regulator [Prevotella
ruminicola 23]
Length = 1284
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 17/146 (11%)
Query: 9 FHVLAVDD-SIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ VL VDD I R + + L Y +T V SG +AL L L+E E+ Q +L+
Sbjct: 1025 YQVLIVDDDEEIGRYIAQEL--GCYYHITPVTSGREALRLL--LSESEK------QFDLV 1074
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
++D MP M G+ LLR IK + +L IPVV+++S+ + LE+GA+ F KP +
Sbjct: 1075 VSDVMMPEMDGFTLLRMIKTNMNLNHIPVVMLTSKAAVANRLEGLEKGADAFLAKPFDMD 1134
Query: 128 DVNKLKPHL------MKGISKEIKEP 147
+++ + +L +KG +++P
Sbjct: 1135 ELHMVINNLISTNLRLKGKYSGLQQP 1160
>gi|428771269|ref|YP_007163059.1| response regulator receiver protein [Cyanobacterium aponinum PCC
10605]
gi|428685548|gb|AFZ55015.1| response regulator receiver protein [Cyanobacterium aponinum PCC
10605]
Length = 121
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V+DSI RK+I LL + V G +ALE L L D L+I D
Sbjct: 4 VLLVEDSIPTRKMISELLTKQGFNVEVATDGIQALEVLPNLRPD-----------LVILD 52
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MP M GY++ RKIK KD+PV+I SS+ +++GA+ + KP +
Sbjct: 53 IIMPKMNGYEVCRKIKSDPQTKDLPVIICSSKGEDFDRYWGIKQGADAYIAKPFR 107
>gi|404493031|ref|YP_006717137.1| chemotaxis protein CheY [Pelobacter carbinolicus DSM 2380]
gi|77545095|gb|ABA88657.1| chemotaxis protein CheY [Pelobacter carbinolicus DSM 2380]
Length = 131
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 13/141 (9%)
Query: 7 SQFHVLAVDDSIIDRKL-IERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVN 65
S ++VL V+DS I R+L + L + V G +AL+ + N ++
Sbjct: 2 SGYNVLVVEDSSIMRQLLVMSLRRLPGIVVMEASDGLEALKIIANKN-----------LS 50
Query: 66 LIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
LI +D MPGM G L+R ++ KDIPVV++++E +R + GA E+ KPVQ
Sbjct: 51 LIFSDVNMPGMDGLKLVRMLRGDRRTKDIPVVMVTTEGAEEDRDRAMALGATEYITKPVQ 110
Query: 126 LADVNKLKPHLMKGISKEIKE 146
+V ++ L+ G+S +I E
Sbjct: 111 AGNVVEIASRLL-GLSTDIAE 130
>gi|222112067|ref|YP_002554331.1| chea signal transduction histidine kinase [Acidovorax ebreus TPSY]
gi|221731511|gb|ACM34331.1| CheA signal transduction histidine kinase [Acidovorax ebreus TPSY]
Length = 2026
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDSI R++ +RLL+ Y+V G +ALE L Q + ++++D
Sbjct: 1902 ILVVDDSITVRRVTQRLLQREGYRVALAADGLQALERL-----------QEERPAVVLSD 1950
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+DL R I+ A+L+D+P+++++S + +E G + KP ++
Sbjct: 1951 IEMPRMDGFDLARNIRSDAALQDLPIIMITSRIAQKHRDHAMELGVNHYLGKPYSDEELM 2010
Query: 131 KLKPH 135
L H
Sbjct: 2011 SLVRH 2015
>gi|427729155|ref|YP_007075392.1| signal transduction histidine kinase [Nostoc sp. PCC 7524]
gi|427365074|gb|AFY47795.1| signal transduction histidine kinase [Nostoc sp. PCC 7524]
Length = 918
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+Q VL VDD +R +I LL+ + V +G + LE ++ Q +L
Sbjct: 703 AQRKVLVVDDKWENRSVIVNLLEPIGFVVAEASNGQEGLE-----------QAKTYQPDL 751
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
IITD MP M G+DLLR++++ LK+I + S+ + + LE GA +F KPVQ
Sbjct: 752 IITDLVMPVMHGFDLLRQLRQFDDLKNIVAIASSASVFDTDQFKSLEAGANDFLPKPVQ- 810
Query: 127 ADV--NKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSAD 164
AD+ ++ HL E + N + + ++D A+
Sbjct: 811 ADILLQMIQKHLQLKWFYEYRASNLNSGAKPTQTQVDIAE 850
>gi|317485575|ref|ZP_07944452.1| sigma-54 interaction domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316923255|gb|EFV44464.1| sigma-54 interaction domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 616
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 11 VLAVDDSIID-RKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
VL VDD + R L+ +L Y++ SG KALE++G D L++
Sbjct: 10 VLVVDDDPTNLRILVSKL--NREYRLGVAKSGTKALEYMGKQIPD-----------LVLL 56
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP M GY + IK L DIPVV +S + PS+ R E G ++ KP A+V
Sbjct: 57 DVMMPDMDGYAVCEHIKRDPRLCDIPVVFISYVDDPSQKTRGFEVGGVDYITKPFHDAEV 116
Query: 130 -NKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTI 174
+++ H+M +K+++E +N G +E+D R L D +
Sbjct: 117 LARVRTHIM---NKQMREQLKRHNAEIG-KELDEHRRQLLALLDNL 158
>gi|121595866|ref|YP_987762.1| CheA signal transduction histidine kinase [Acidovorax sp. JS42]
gi|120607946|gb|ABM43686.1| CheA signal transduction histidine kinase [Acidovorax sp. JS42]
Length = 2026
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDSI R++ +RLL+ Y+V G +ALE L Q + ++++D
Sbjct: 1902 ILVVDDSITVRRVTQRLLQREGYRVALAADGLQALERL-----------QEERPAVVLSD 1950
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+DL R I+ A+L+D+P+++++S + +E G + KP ++
Sbjct: 1951 IEMPRMDGFDLARNIRSDAALQDLPIIMITSRIAQKHRDHAMELGVNHYLGKPYSDEELM 2010
Query: 131 KLKPH 135
L H
Sbjct: 2011 SLVRH 2015
>gi|443321876|ref|ZP_21050915.1| signal transduction histidine kinase [Gloeocapsa sp. PCC 73106]
gi|442788420|gb|ELR98114.1| signal transduction histidine kinase [Gloeocapsa sp. PCC 73106]
Length = 349
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+VLA+DD + LI+ L+ Y V DSG KAL+ + D+ +LI+
Sbjct: 4 YVLAIDDIYDNLLLIQLALEQEGYSVVLADSGQKALKII-----DQHPP------DLILV 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
D MP M GY++ R++++ L IP++++++ PS I L+ GA+EF KP++L
Sbjct: 53 DVMMPEMDGYEVTRRVRQHPHLPYIPILLITAHEKPSLIEG-LDLGADEFIRKPIKL 108
>gi|443311680|ref|ZP_21041305.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechocystis sp. PCC 7509]
gi|442778253|gb|ELR88521.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Synechocystis sp. PCC 7509]
Length = 145
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 18/139 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+D+ ++R +++ L YQV ++ G K E L Q +LI+ D
Sbjct: 25 LLVVEDNNLNRLMLDDYLVFCGYQVLSLACGAKFFEELA-----------AFQPHLILLD 73
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P + GY +L +++ + ++IPV+I+S+ + R L GA ++F+KPV L D
Sbjct: 74 LKLPDIDGYSILEQLQNDSQWQNIPVIIVSAFAFKADSQRALNLGARQYFIKPVNLND-- 131
Query: 131 KLKPHLMKGISKEIKEPNN 149
L + IS+E+ + +N
Sbjct: 132 -----LSQAISQELNKWSN 145
>gi|325284790|ref|YP_004264253.1| CheA signal transduction histidine kinase [Deinococcus proteolyticus
MRP]
gi|324316279|gb|ADY27393.1| CheA signal transduction histidine kinase [Deinococcus proteolyticus
MRP]
Length = 1136
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDS+ R+L+ R+L+ Y+V + G +AL+ L L + +L+I+D
Sbjct: 1017 VLLVDDSLSVRRLVSRMLERGGYEVVTANDGQEALDLLQLDT----------RFDLVISD 1066
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
MP M GY+LL ++ + +P+V+M++ + GA ++F KPV A
Sbjct: 1067 LEMPRMNGYELLSALRGRPATAALPLVVMTTRAGEKHQRLAFQLGANDYFSKPVDEA 1123
>gi|159485404|ref|XP_001700734.1| hypothetical protein CHLREDRAFT_113139 [Chlamydomonas reinhardtii]
gi|158281233|gb|EDP06988.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 235
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 14/132 (10%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+ +L VDD + K++E++L+ SY+VT + AL L D+ T + +L
Sbjct: 3 AGLRLLVVDDDPLCLKVVEQMLRKCSYEVTVCSNATTALNIL----RDKNT-----EYDL 53
Query: 67 IITDYCMPGMTGYDLLRKIKESASLK-DIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
+++D MP M G+ LL E L+ D+PV++MSS S + R + GA ++ +KPV+
Sbjct: 54 VLSDVYMPDMDGFRLL----ELVGLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVR 109
Query: 126 LADVNKLKPHLM 137
L ++ L H++
Sbjct: 110 LEELRNLWQHVV 121
>gi|359438460|ref|ZP_09228480.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20311]
gi|358026875|dbj|GAA64729.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20311]
Length = 311
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 12/113 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD ++R ++E+ L + +++ V SG +AL F+ + QV+LII D
Sbjct: 7 ILIVDDDALNRIILEKTL-SDEHEIYLVTSGEEALAFV-----------KHTQVDLIILD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MPGM GYD+L ++KES+ IP++ +S+ + + LE GA ++ +KP
Sbjct: 55 IMMPGMNGYDVLVELKESSLSHAIPIIFISANSSHEDEAKGLELGAMDYIVKP 107
>gi|390948827|ref|YP_006412586.1| chemotaxis signal transduction protein [Thiocystis violascens DSM
198]
gi|390425396|gb|AFL72461.1| chemotaxis signal transduction protein [Thiocystis violascens DSM
198]
Length = 307
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDDS++ RK IER + ++ G ALE+L L + S + ++I D
Sbjct: 182 ILVVDDSLVARKQIERAIMELGFRTETRSDGRAALEYLEELAAADMVESSI---EMVIAD 238
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK--PVQLA 127
MP M GY L RKI+E LKD+ V++ SS + + GA++F K P +LA
Sbjct: 239 IEMPRMDGYTLTRKIREHGKLKDLRVILHSSLSGQFNHDMVKRAGADDFLAKFDPDELA 297
>gi|196231875|ref|ZP_03130731.1| multi-sensor hybrid histidine kinase [Chthoniobacter flavus Ellin428]
gi|196223997|gb|EDY18511.1| multi-sensor hybrid histidine kinase [Chthoniobacter flavus Ellin428]
Length = 1088
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 19/145 (13%)
Query: 5 TDSQFHVLAVDDSIIDRKLIERLLKTS-SYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
TD + +L ++D ++ +L+ER+L Y++ GN LE SQ Q
Sbjct: 962 TDGRHTLLYIEDQDLNLRLVERILNPRPQYRLITATLGNTGLEL---------ARSQ--Q 1010
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
+LI+ D +P MTG ++L ++K A+++ IPV+++S++ + RI L GA + KP
Sbjct: 1011 PDLILLDLNLPDMTGDEVLHRLKSDAAVRHIPVIMVSADAMGERIEHLLRLGAAGYLTKP 1070
Query: 124 VQLADVNKLKPHLMKGISKEIKEPN 148
+L + ++ I K +K P+
Sbjct: 1071 YKLDE-------FLRVIQKNLKSPH 1088
>gi|443315490|ref|ZP_21044978.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
gi|442784916|gb|ELR94768.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
Length = 1118
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 74/133 (55%), Gaps = 15/133 (11%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFL--GLLNEDEQTNSQVIQV 64
+Q VL VDD I+R+++ L +Y +T +G +AL+ + G L +
Sbjct: 708 AQIKVLIVDDEPINRQVLINNLSLYNYAITEASNGQEALKIIDEGFLPD----------- 756
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
LI+ D MP MTGY++ +KI++ ++P+V+++++N + I E GA ++ KP+
Sbjct: 757 -LILLDVMMPRMTGYEVCKKIRDRFPSYELPIVMLTAKNQVADIVEGFESGANDYLCKPI 815
Query: 125 QLAD-VNKLKPHL 136
Q + + ++K HL
Sbjct: 816 QKQEMLARIKTHL 828
>gi|392552009|ref|ZP_10299146.1| chemotaxis protein [Pseudoalteromonas spongiae UST010723-006]
Length = 127
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 12/123 (9%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSY-QVTAVDSGNKALEFLGLLNEDEQTNSQVIQV 64
D +L VDD R++I+ LL+ + V D G+ AL L Q +
Sbjct: 2 DKNMKILVVDDFSTMRRIIKNLLRDLGFTNVQEADDGSTALPML-----------QNQEF 50
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
+ ++TD+ MPGM G DLLR I+ SLK IPV+++++E +I + G + +KP
Sbjct: 51 DFVVTDWNMPGMQGIDLLRAIRADDSLKHIPVLMVTAEAKKEQIIAAAQAGVNGYIVKPF 110
Query: 125 QLA 127
A
Sbjct: 111 TAA 113
>gi|384250534|gb|EIE24013.1| hypothetical protein COCSUDRAFT_65695 [Coccomyxa subellipsoidea
C-169]
Length = 1818
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+++ VL VD R+ + LL+ +YQV V S +AL+ L +D+Q
Sbjct: 745 ILSPQSLRVLVVDSKASARQEVVALLRKCTYQVMEVKSTAEALQLL----KDQQARDGAP 800
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
V+LI+ ++ P LLR+ E L+ +PVV+MSS+ + CL+ GA ++ ++
Sbjct: 801 GVDLILKEHDPPAANACRLLRRTLEDDVLRTVPVVVMSSQEDRDVMVACLQLGAADYMIR 860
Query: 123 PVQLADVNKL 132
P++ ++ L
Sbjct: 861 PLRHNELRNL 870
>gi|58582493|ref|YP_201509.1| RpfC protein [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84624381|ref|YP_451753.1| rpfC protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58427087|gb|AAW76124.1| RpfC protein [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84368321|dbj|BAE69479.1| rpfC protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 725
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 68/121 (56%), Gaps = 13/121 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD +R +++RLL+ + ++V V+ + L+ + +ED + +I D
Sbjct: 463 MLVADDHEANRMVLQRLLEKAGHRVMCVNGAEQVLD--AMADED---------FDAVIVD 511
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
MPGM+G D+L++++ +++ ++ PVV++S++ P I C + GA F KPV A
Sbjct: 512 LHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAK 571
Query: 129 V 129
+
Sbjct: 572 L 572
>gi|402813381|ref|ZP_10862976.1| Two-component hybrid sensor and regulator [Paenibacillus alvei DSM
29]
gi|402509324|gb|EJW19844.1| Two-component hybrid sensor and regulator [Paenibacillus alvei DSM
29]
Length = 1018
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD ++ K++ +L Y+V SG +AL L Q +LII+D
Sbjct: 695 ILIVDDDRVNLKILGDILSADQYEVVRAASGKEALSKL-----------DTAQWDLIISD 743
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M+GY+L R I+E S+ ++P++I+++ + I+ GA ++ KPV ++
Sbjct: 744 VMMPHMSGYELTRLIRERFSILELPILILTARSNAEDIHSGFMAGANDYVTKPVDAMEL- 802
Query: 131 KLKPHLMKGISKEIKE 146
+ + H + + + + E
Sbjct: 803 RSRVHALTELKRAVNE 818
>gi|158335119|ref|YP_001516291.1| response regulator receiver domain-containing protein
[Acaryochloris marina MBIC11017]
gi|158305360|gb|ABW26977.1| response regulator receiver domain protein, putative [Acaryochloris
marina MBIC11017]
Length = 595
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 69/127 (54%), Gaps = 12/127 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD +R ++ R L+ Y+V DSG ALE + + + L++ D
Sbjct: 185 LLVVDDVEANRDMLSRRLQRKGYEVALADSGEAALELMATTD-----------IALVLLD 233
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL-ADV 129
MPG+ G + L++I++ S +++PV++ ++++ + LE GA ++ KP+ L +
Sbjct: 234 IMMPGIGGIETLKRIRQIYSQEELPVIMATAKDASENVVEALELGANDYITKPIDLPVAL 293
Query: 130 NKLKPHL 136
+++ HL
Sbjct: 294 ARIQSHL 300
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 13/105 (12%)
Query: 23 LIERLLKTSSYQVT-AVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCMPGMTGYDL 81
++ R LK Y V AVD G T + Q +LI+ D +P M G++
Sbjct: 1 MLGRRLKRRGYDVVIAVDGGEGV------------TKALTEQPDLILMDMSLPVMNGWEA 48
Query: 82 LRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
R +K IP++ +++ + L G +++ KPV L
Sbjct: 49 TRTLKAGDQTATIPIIALTAHAMVGDREEALAAGCDDYDTKPVDL 93
>gi|89900169|ref|YP_522640.1| CheA signal transduction histidine kinase [Rhodoferax ferrireducens
T118]
gi|89344906|gb|ABD69109.1| CheA signal transduction histidine kinases [Rhodoferax ferrireducens
T118]
Length = 1888
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDDSI R++ +RLLK ++V G +ALE L Q + ++++D
Sbjct: 1767 VLVVDDSITVRRVTQRLLKREGFRVALAIDGLQALERL-----------QEEKPAVVLSD 1815
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MP M G+DL+R I+ A L+D+P+++++S R E G + + KP
Sbjct: 1816 IEMPRMDGFDLVRNIRGDAKLRDLPIIMITSRIAEKHRERARELGVDHYLGKP 1868
>gi|298530355|ref|ZP_07017757.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509729|gb|EFI33633.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 361
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ +DD+ + KL++ +L+ Y+V A G AL+ D LI+ D
Sbjct: 10 IMIIDDTPANLKLLQEMLQGRGYRVMAFPQGEMALKAAARKPPD-----------LILLD 58
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG+ G+ + + KE LKDIPV+ +S+ N PS + G ++ KP +V+
Sbjct: 59 IRMPGLDGFQVCTRFKEQEGLKDIPVIFISALNDPSDKVQAFAAGGVDYVTKPFHPEEVH 118
Query: 131 -KLKPHL-MKGISKEIKEPN 148
++ H+ ++G+ K++++ N
Sbjct: 119 ARVATHIRLRGLQKQVEDYN 138
>gi|301061357|ref|ZP_07202137.1| PAS domain S-box protein [delta proteobacterium NaphS2]
gi|300444534|gb|EFK08519.1| PAS domain S-box protein [delta proteobacterium NaphS2]
Length = 492
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 13/117 (11%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
HVL VDD + R R+L Y++T ++G++ALE LG +++++
Sbjct: 6 HVLVVDDEKVVRDGCRRVLSGRGYEITTAENGSQALEILG-----------AEHIDILLL 54
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
D MP M+G ++L + +++ DIPV++++ C+++GA +F KP Q+
Sbjct: 55 DLKMPVMSGEEVLERTRDTHP--DIPVIVITGHGTVDTAVECMKKGAYDFITKPFQI 109
>gi|298103724|emb|CBM42563.1| putative B-type response regulator 21 [Populus x canadensis]
Length = 563
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 19/157 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD K++E++LK SY+VT AL LL E + +++I+D
Sbjct: 19 VLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALN---LLRERKGG------YDIVISD 69
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL + D+PV++MS + SR+ + ++ GA ++ LKP+++ ++
Sbjct: 70 VFMPDMDGFKLLEHVGLEM---DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELR 126
Query: 131 KLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTR 167
+ H+ + K+I E +I + LE I+S TR
Sbjct: 127 NIWQHVFR---KKIHEVRDI----EILEGIESFQMTR 156
>gi|153871532|ref|ZP_02000680.1| adenylate/guanylate cyclase [Beggiatoa sp. PS]
gi|152071998|gb|EDN69316.1| adenylate/guanylate cyclase [Beggiatoa sp. PS]
Length = 594
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 74/131 (56%), Gaps = 14/131 (10%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
Q VL VDD+ ++ K++ R LK + ++V +G A+ T + ++ ++I
Sbjct: 5 QNKVLIVDDNSVNLKILSRFLKKAHFEVIMAKNGESAI-----------TQVKNLKPDII 53
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSS-ENIPSRINRCLEEGAEEFFLKPVQL 126
+ D MPGM G++ R +K + KDIPV+ M++ E+ P ++ + + GA ++ KPVQ+
Sbjct: 54 LLDIMMPGMDGFETCRCLKANEESKDIPVIFMTALESTPDKV-KGFKIGAIDYITKPVQM 112
Query: 127 ADV-NKLKPHL 136
+V ++ HL
Sbjct: 113 EEVLARVNTHL 123
>gi|27380234|ref|NP_771763.1| response regulator PleD [Bradyrhizobium japonicum USDA 110]
gi|27353388|dbj|BAC50388.1| two-component response regulator [Bradyrhizobium japonicum USDA
110]
Length = 457
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L VDD + KL+E L + V +G +AL S+ + ++I+ D
Sbjct: 5 ILVVDDVPANVKLLEARLSAEYFDVMTASNGTEALAI-----------SRRAECDIILLD 53
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MP M G+++ R++K + IPVV++++ + PS NR LE GA++F KPV
Sbjct: 54 VMMPDMDGFEVCRRLKTDPATHHIPVVMVTALDSPSDRNRGLEAGADDFLTKPVS 108
>gi|384085641|ref|ZP_09996816.1| chemotaxis protein CheV [Acidithiobacillus thiooxidans ATCC 19377]
Length = 318
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI--QVNLII 68
+L DDS + R IE+ LK+ +G +ALE L L +D + + + +V L++
Sbjct: 188 ILYADDSGVARNQIEKTLKSLGLAFIGTKTGKEALERLKQLAQDAKASGTPLRDKVALVL 247
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSS 101
TD MP M G+ L R IKE+ +L+D+PVVI SS
Sbjct: 248 TDLEMPEMDGFTLTRHIKENEALRDVPVVIHSS 280
>gi|416018326|ref|ZP_11565313.1| sensory box protein/response regulator [Pseudomonas syringae pv.
glycinea str. B076]
gi|320322881|gb|EFW78972.1| sensory box protein/response regulator [Pseudomonas syringae pv.
glycinea str. B076]
Length = 705
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
+T S +L +DD + R L+E LL+ Y+ +SG L + L D
Sbjct: 1 MTQSAATILIIDDDVHVRDLLEVLLQNQGYRTLTAESGELGLAMVELQAPD--------- 51
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
LI+ D MPGM GY++ ++K S S +IP++++S+ + S LE G EE+ KP
Sbjct: 52 --LILLDIMMPGMDGYEVASQLKASKSTANIPIIMLSALDEQSARLSGLEAGTEEYLNKP 109
Query: 124 VQLADV 129
V A++
Sbjct: 110 VDSAEL 115
>gi|188575996|ref|YP_001912925.1| two component sensor-regulator hybrid protein RpfC [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|188520448|gb|ACD58393.1| two component sensor-regulator hybrid protein RpfC [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 718
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 68/121 (56%), Gaps = 13/121 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD +R +++RLL+ + ++V V+ + L+ + +ED + +I D
Sbjct: 456 MLVADDHEANRMVLQRLLEKAGHRVMCVNGAEQVLD--AMADED---------FDAVIVD 504
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
MPGM+G D+L++++ +++ ++ PVV++S++ P I C + GA F KPV A
Sbjct: 505 LHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAK 564
Query: 129 V 129
+
Sbjct: 565 L 565
>gi|445499222|ref|ZP_21466077.1| chemotaxis protein CheA [Janthinobacterium sp. HH01]
gi|444789217|gb|ELX10765.1| chemotaxis protein CheA [Janthinobacterium sp. HH01]
Length = 1936
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ VDDS+ R++ +RLL+ Y V G ALE L Q + +L++ D
Sbjct: 1816 IMVVDDSMTVRRVTQRLLEREGYNVVLAKDGVDALEQL-----------QSARPDLMLVD 1864
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQ 125
MP M G+DL R ++ +DIP+++++S + N L+ G +F KP Q
Sbjct: 1865 IEMPRMDGFDLTRNVRGDERTRDIPIIMITSRSADKHRNYALQLGVNAYFGKPFQ 1919
>gi|332534442|ref|ZP_08410281.1| putative two-component response regulator [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036095|gb|EGI72571.1| putative two-component response regulator [Pseudoalteromonas
haloplanktis ANT/505]
Length = 299
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD I+R ++E+ LK + V V+SG KAL F+ + QV+LII D
Sbjct: 7 VLIVDDDPINRLVLEKTLKVE-HDVFLVESGEKALTFV-----------KTAQVDLIILD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
MPG+ GY++L ++KE+ + IPV+ +S+ + LE GA ++ KP
Sbjct: 55 VIMPGIDGYEVLVQLKENPITQSIPVIFISANRSHDDEAKGLELGAMDYITKP 107
>gi|320354148|ref|YP_004195487.1| multi-sensor hybrid histidine kinase [Desulfobulbus propionicus DSM
2032]
gi|320122650|gb|ADW18196.1| multi-sensor hybrid histidine kinase [Desulfobulbus propionicus DSM
2032]
Length = 900
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 16/125 (12%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFL--GLLNEDEQTNSQVIQVNLII 68
+L +D I++ LI LL+ + YQVT V++G KA++ GL + I+
Sbjct: 760 ILVAEDEYINKILIRTLLRQAGYQVTVVENGRKAVDAWRGGLF-------------DCIL 806
Query: 69 TDYCMPGMTGYDLLRKIKES-ASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
D MP M GY+ + +I+E+ + IP++ M++ +PS +CL G +++ KP+ +
Sbjct: 807 MDIQMPEMDGYEAVARIREAEGDNQHIPIIAMTAHAMPSDRQKCLSSGMDDYVSKPIDGS 866
Query: 128 DVNKL 132
V K+
Sbjct: 867 SVLKI 871
>gi|386286951|ref|ZP_10064131.1| hypothetical protein DOK_06100 [gamma proteobacterium BDW918]
gi|385279990|gb|EIF43922.1| hypothetical protein DOK_06100 [gamma proteobacterium BDW918]
Length = 623
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
Query: 2 GMVTDSQFH----VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQT 57
G++ D + H +L VDD+ R L+ L+ + V SG + LE + N D
Sbjct: 151 GIIRDDKDHLTGSILVVDDNDSSRDLLAHQLQRQDHMVIEAASGERCLEVMRSANPD--- 207
Query: 58 NSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAE 117
L++ D MP M GY++L+ I+ +L+ IPV+++S RC++ GA
Sbjct: 208 --------LVLLDLVMPDMNGYEVLQVIRSDEALRRIPVIVVSGMQDEEGAVRCIDAGAS 259
Query: 118 EFFLKPV 124
++ LKPV
Sbjct: 260 DYLLKPV 266
>gi|424810226|ref|ZP_18235589.1| response regulator [Vibrio mimicus SX-4]
gi|342322597|gb|EGU18386.1| response regulator [Vibrio mimicus SX-4]
Length = 379
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 13/145 (8%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQ 60
M M +Q +L VDDS + + + L Y++ A SG ALE L EQ
Sbjct: 1 MSMKDLTQCTILIVDDSPDNIAFMSQGL-AQYYRIKAARSGKVALEIL------EQ---- 49
Query: 61 VIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFF 120
++L++ D MP M+GYD++ +IK++A ++IPV+ ++ ++ P E GA ++
Sbjct: 50 -YPIDLVLLDIVMPEMSGYDVIHQIKQNAHTENIPVIFLTGKSSPEDEQLGFELGAVDYV 108
Query: 121 LKPVQLADV-NKLKPHLMKGISKEI 144
KPV + + ++++ HL +SK+I
Sbjct: 109 FKPVSIPLLKSRVQTHLQNKLSKDI 133
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.135 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,644,680,538
Number of Sequences: 23463169
Number of extensions: 99393312
Number of successful extensions: 377096
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18999
Number of HSP's successfully gapped in prelim test: 52720
Number of HSP's that attempted gapping in prelim test: 316664
Number of HSP's gapped (non-prelim): 77061
length of query: 187
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 53
effective length of database: 9,215,130,721
effective search space: 488401928213
effective search space used: 488401928213
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 72 (32.3 bits)