BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046192
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80366|ARR9_ARATH Two-component response regulator ARR9 OS=Arabidopsis thaliana
GN=ARR9 PE=1 SV=1
Length = 234
Score = 229 bits (585), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 121/228 (53%), Positives = 145/228 (63%), Gaps = 57/228 (25%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQ---- 56
MGM +SQFHVLAVDDS+ DRKLIERLL+ SS QVT VDSG+KALEFLGL +
Sbjct: 1 MGMAAESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPN 60
Query: 57 ------TNSQVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINR 110
N QV++VNLIITDYCMPGMTGYDLL+K+KES++ +DIPVVIMSSEN+P+RI+R
Sbjct: 61 AFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISR 120
Query: 111 CLEEGAEEFFLKPVQLADVNKLKPHLMK-------------------GISKEIKEPN--- 148
CLEEGAEEFFLKPV+LAD+NKLKPH+MK G+ + +P
Sbjct: 121 CLEEGAEEFFLKPVRLADLNKLKPHMMKTKLKNQKLEEIETTSKVENGVPTAVADPEIKD 180
Query: 149 -------------------------NINNKRKGLEEIDSADRTRTRLN 171
+INNKRK +EE S DR R R +
Sbjct: 181 STNIEIEILPLQQDLLLVQQEEQTLSINNKRKSVEEGISTDRARPRFD 228
>sp|O80365|ARR8_ARATH Two-component response regulator ARR8 OS=Arabidopsis thaliana
GN=ARR8 PE=1 SV=1
Length = 225
Score = 224 bits (572), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 144/220 (65%), Gaps = 48/220 (21%)
Query: 1 MGMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS- 59
M M T+S+FHVLAVDDS+ DRK+IERLL+ SS QVT VDSG+KALEFLGL +D N+
Sbjct: 1 MVMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNAL 60
Query: 60 -------QVIQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCL 112
Q +++NLIITDYCMPGMTGYDLL+K+KESA+ + IPVVIMSSEN+P+RI+RCL
Sbjct: 61 STSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCL 120
Query: 113 EEGAEEFFLKPVQLADVNKLKPHLMKG--------------------------------- 139
EEGAEEFFLKPV+LAD+ KLKPH+MK
Sbjct: 121 EEGAEEFFLKPVKLADLTKLKPHMMKTKLKKESEKPVAIEEIVVSKPEIEEEEEESSVIE 180
Query: 140 -------ISKEIKEPNNINNKRKGLEEIDSADRTRTRLND 172
I E EP +NKRK +EE+ S DR+R + ND
Sbjct: 181 ILPLHQEIESEQLEPMLSSNKRKAMEEVVSTDRSRPKYND 220
>sp|O82798|ARR4_ARATH Two-component response regulator ARR4 OS=Arabidopsis thaliana
GN=ARR4 PE=1 SV=1
Length = 259
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/148 (61%), Positives = 120/148 (81%), Gaps = 6/148 (4%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS++DR +IERLL+ +S +VTAVDSG +ALEFLGL NE ++V+LI
Sbjct: 33 EVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLI 92
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITDYCMPGMTGY+LL+KIKES++ +++PVVIMSSEN+ +RI+RCLEEGA++F LKPV+LA
Sbjct: 93 ITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLA 152
Query: 128 DVNKLKPHLMKGISKEIKEPNNINNKRK 155
DV +L+ HL +K++K N NKRK
Sbjct: 153 DVKRLRSHL----TKDVKLSN--GNKRK 174
>sp|Q9ZWS9|ARR3_ARATH Two-component response regulator ARR3 OS=Arabidopsis thaliana
GN=ARR3 PE=2 SV=1
Length = 231
Score = 184 bits (466), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/148 (60%), Positives = 116/148 (78%), Gaps = 5/148 (3%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
Q HVLAVDDS++DR +IERLL+ +S +VTAVDSG +ALEFLGL ++ ++V+LI
Sbjct: 32 QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLI 91
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
ITDYCMPGMTGY+LL+KIKES S K++PVVIMSSEN+ +RI+RCLEEGAE+F LKPV+LA
Sbjct: 92 ITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLA 151
Query: 128 DVNKLKPHLMKGISKEIKEPNNINNKRK 155
DV +L+ +L + + + NKRK
Sbjct: 152 DVKRLRSYLTRDVKVAAE-----GNKRK 174
>sp|Q9ZWS7|ARR7_ARATH Two-component response regulator ARR7 OS=Arabidopsis thaliana
GN=ARR7 PE=1 SV=1
Length = 206
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/152 (57%), Positives = 121/152 (79%), Gaps = 1/152 (0%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQ 63
VT + HVLAVDDSI+DRK+IERLL+ SS +VT V+SG +AL++LGL +N + ++
Sbjct: 19 VTTPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLK 78
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
VNLI+TDY MPG++GYDLL+KIKES++ +++PVVIMSSENI RI CL+EGAEEF LKP
Sbjct: 79 VNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKP 138
Query: 124 VQLADVNKLKPHLMKGISKEIKEPNNINNKRK 155
V+LADV ++K +M+ ++E K ++ +NKRK
Sbjct: 139 VKLADVKRIKQLIMRNEAEECKILSH-SNKRK 169
>sp|Q9SB04|ARR5_ARATH Two-component response regulator ARR5 OS=Arabidopsis thaliana
GN=ARR5 PE=1 SV=2
Length = 184
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 117/151 (77%), Gaps = 10/151 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV----IQV 64
HVLAVDDS++DRK IERLL+ SS +VT VDS +AL++LGL D + NS V +++
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL---DGENNSSVGFEDLKI 81
Query: 65 NLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
NLI+TDY MPGMTGY+LL+KIKES++ ++IPVVIMSSENI RI+RCLEEGAE+F LKPV
Sbjct: 82 NLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPV 141
Query: 125 QLADVNKLKPHLMKGISKEIKEPNNINNKRK 155
+LADV +L+ LMK + K NI +KR+
Sbjct: 142 KLADVKRLRDSLMKAEERAFK---NIMHKRE 169
>sp|Q7G8V2|ARR15_ARATH Two-component response regulator ARR15 OS=Arabidopsis thaliana
GN=ARR15 PE=1 SV=1
Length = 206
Score = 175 bits (444), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 116/147 (78%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ HVLAVDDS +DRK+IERLLK S+ +VT V+SG +AL++LGL ++ + + ++VNLI
Sbjct: 17 ELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLI 76
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
+TDY MPG+TGY+LL+KIKES++L++IPVVIMSSENI RI +C+ EGAEEF LKPV+LA
Sbjct: 77 VTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLA 136
Query: 128 DVNKLKPHLMKGISKEIKEPNNINNKR 154
DV +LK +M+G E + ++ KR
Sbjct: 137 DVKRLKELIMRGGEAEEGKTKKLSPKR 163
>sp|Q9FPR6|ARR17_ARATH Two-component response regulator ARR17 OS=Arabidopsis thaliana
GN=ARR17 PE=2 SV=1
Length = 153
Score = 174 bits (440), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 114/134 (85%), Gaps = 3/134 (2%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS--QVIQ 63
+ + HVLAVDD++IDRKL+ER+LK SS +VT ++G +ALE+LGL + +QT+S V++
Sbjct: 17 EEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGL-GDPQQTDSLTNVMK 75
Query: 64 VNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
VNLIITDYCMPGMTG++LL+K+KES++LK++PVVI+SSENIP+RIN+CL GA+ F KP
Sbjct: 76 VNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKP 135
Query: 124 VQLADVNKLKPHLM 137
++L+DV KLK HL+
Sbjct: 136 LKLSDVEKLKCHLL 149
>sp|Q9SHC2|ARR16_ARATH Two-component response regulator ARR16 OS=Arabidopsis thaliana
GN=ARR16 PE=1 SV=1
Length = 164
Score = 174 bits (440), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 112/135 (82%), Gaps = 3/135 (2%)
Query: 6 DSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNS---QVI 62
D + HVLAVDD++IDRKL+ERLLK S +VT ++ +ALE+LGL ++++ ++ V+
Sbjct: 26 DEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVM 85
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+V+LIITDYCMPGMTG++LL+K+KES++L+++PVVIMSSENIP+RIN+CL GA+ F K
Sbjct: 86 KVSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQK 145
Query: 123 PVQLADVNKLKPHLM 137
P++LADV KLK HLM
Sbjct: 146 PLKLADVEKLKCHLM 160
>sp|Q9ZWS6|ARR6_ARATH Two-component response regulator ARR6 OS=Arabidopsis thaliana
GN=ARR6 PE=1 SV=2
Length = 186
Score = 173 bits (438), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 107/130 (82%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
HVLAVDDS +DRK IERLL+ SS +VT VDS +AL++LGL E++ + ++VNLI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
TDY MPGMTGY+LL+KIKES++ +++PVVIMSSENI RI+RCLEEGAE+F LKPV+L+D
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
Query: 129 VNKLKPHLMK 138
V +L+ LMK
Sbjct: 145 VKRLRDSLMK 154
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 73.2 bits (178), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD K++E LL+ Y VT + KALE LL E++ + +L+I+D
Sbjct: 19 VLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALE---LLRENKN------KFDLVISD 69
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL + D+PV+++S+ + P + + + GA ++ LKPV++ ++
Sbjct: 70 VDMPDMDGFKLLELVGLEM---DLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELK 126
Query: 131 KLKPHLMKGISKEIKEPNNINNKRKG 156
+ H+++ + + NN +KR G
Sbjct: 127 NIWQHVVRSRFDKNRGSNNNGDKRDG 152
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VD R+++ LL+ Y+V ++G +A +L ED Q + ++L++T+
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL----EDMQNS-----IDLVLTE 114
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG++G LL +I K+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 115 VVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELK 174
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 175 NLWQHVWR 182
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VD R+++ LL+ Y+V ++G +A +L ED Q + ++L++T+
Sbjct: 64 VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL----EDMQNS-----IDLVLTE 114
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MPG++G LL +I K+IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 115 VVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELK 174
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 175 NLWQHVWR 182
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
++ DDS R++I LL+ SY+V AV G KA E L E V+LI+T+
Sbjct: 54 LVEADDST--RQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPES---------VDLILTE 102
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
+P ++GY LL I E K+IPV++MS+++ + + +C+ +GA ++ +KP++ ++
Sbjct: 103 VDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELR 162
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 163 NLWQHVWR 170
>sp|Q23917|PDE2_DICDI 3',5'-cyclic-nucleotide phosphodiesterase regA OS=Dictyostelium
discoideum GN=regA PE=1 SV=1
Length = 793
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 10/119 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S+ +L DD + RK++ LLK Y VT V +G A E++ N+ +Q + +L
Sbjct: 158 SKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYI---NKGQQ------KYDL 208
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRI-NRCLEEGAEEFFLKPV 124
++TD MP +TG+DLL++I + + IPV++MS + + N ++ G ++F KP+
Sbjct: 209 VLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPI 267
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LLK SY+VTAV LE +L EDE++ ++L++T+
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEVTAVPD---VLEAWRIL-EDEKSC-----IDLVLTE 116
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP +G LL KI +LK+IPV++MSS + + +CL GA +F +KP++ ++
Sbjct: 117 VDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELK 176
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 177 NLWQHVWR 184
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V++ R+++ LL+ Y+V ++G A + L ED Q + ++L++
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQNH-----IDLVL 131
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G LL KI KDIPV++MSS + + +CL +GA +F +KP++ +
Sbjct: 132 TEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNE 191
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 192 LKNLWQHVWR 201
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V++ R+++ LL+ Y+V ++G A + L ED Q + ++L++
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQNH-----IDLVL 131
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ MP ++G LL KI KDIPV++MSS + + +CL +GA +F +KP++ +
Sbjct: 132 TEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNE 191
Query: 129 VNKLKPHLMK 138
+ L H+ +
Sbjct: 192 LKNLWQHVWR 201
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 15 DDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCMP 74
DDS R +I LL+ Y+V A G KA + L + ++L++T+ +P
Sbjct: 51 DDST--RHIICALLRKCGYRVAAASDGVKAWDIL---------KEKSFNIDLVLTEVELP 99
Query: 75 GMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKP 134
M+G+ LL I E + K+IPV++MSS + S + +C+ +GA +F +KP++ ++ L
Sbjct: 100 LMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQ 159
Query: 135 HLMK 138
H+ +
Sbjct: 160 HVWR 163
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 13/122 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
V+ VDD + ++ R+L+ S Y+V AVD KAL L + Q ++LIITD
Sbjct: 18 VMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKI---------QRDNIDLIITD 68
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
Y MPGM G L ++I + ++PV++MSS+ ++ L GA F KP+ D+
Sbjct: 69 YYMPGMNGLQLKKQITQ--EFGNLPVLVMSSDT--NKEEESLSCGAMGFIPKPIHPTDLT 124
Query: 131 KL 132
K+
Sbjct: 125 KI 126
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 76/133 (57%), Gaps = 9/133 (6%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
VL V+ R++I LL+ Y+V AV G A E L E++++ ++LI+
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVL-----KEKSHN----IDLIL 87
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
T+ +P ++G+ LL + E + K+IPV++MSS++ + +C+ GA ++ +KP++ +
Sbjct: 88 TELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNE 147
Query: 129 VNKLKPHLMKGIS 141
+ L H+ + ++
Sbjct: 148 LKNLWQHVWRRLT 160
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL V++ R ++ LL+ SY+V +G +A + L LN +++++T+
Sbjct: 80 VLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNN---------HIDIVLTE 130
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP ++G LL KI S ++IPV++MSS + + +CL +GA +F +KP++ ++
Sbjct: 131 VIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELK 190
Query: 131 KLKPHLMK 138
L H+ +
Sbjct: 191 ILWQHVWR 198
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 78/137 (56%), Gaps = 14/137 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL VDD K++E++LK SY+VT +AL LL E + +++I+D
Sbjct: 13 VLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALR---LLRERKDG------YDIVISD 63
Query: 71 YCMPGMTGYDLLRKIKESASLK-DIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MP M G+ LL E L+ D+PV++MS + SR+ + ++ GA ++ LKP+++ ++
Sbjct: 64 VNMPDMDGFKLL----EHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 119
Query: 130 NKLKPHLMKGISKEIKE 146
+ H+++ +E+++
Sbjct: 120 KIIWQHVLRKKLQEVRD 136
>sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=rpfC PE=3 SV=2
Length = 726
Score = 64.3 bits (155), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 13/121 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD +R +++RLL+ + ++V V+ + L+ + ED + +I D
Sbjct: 464 MLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLD--AMAEED---------YDAVIVD 512
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
MPGM G D+L++++ +++ ++ PVV++S++ P I C + GA F KPV A
Sbjct: 513 LHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVLAAK 572
Query: 129 V 129
+
Sbjct: 573 L 573
>sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=rpfC PE=1 SV=2
Length = 726
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 13/121 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD +R +++RLL+ + ++V V+ + L+ + ED + +I D
Sbjct: 464 MLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLD--AMAEED---------YDAVIVD 512
Query: 71 YCMPGMTGYDLLRKIK--ESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
MPGM G D+L++++ +++ ++ PVV++S++ P I C + GA F KPV A
Sbjct: 513 LHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAK 572
Query: 129 V 129
+
Sbjct: 573 L 573
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 12/128 (9%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VLAVDD ++++ LL+ Y VT + ALE LL E++ + +L+I+D
Sbjct: 19 VLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALE---LLRENKN------KFDLVISD 69
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
MP M G+ LL + D+PV+++S+ + P + + ++ GA ++ LKPV++ ++
Sbjct: 70 VDMPDMDGFKLLELVGLEM---DLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELK 126
Query: 131 KLKPHLMK 138
+ H+++
Sbjct: 127 NIWQHVVR 134
>sp|Q51455|CHEY_PSEAE Chemotaxis protein CheY OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=cheY PE=1
SV=1
Length = 124
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTA-VDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L VDD R++I+ LL+ + TA D G AL L N D ++T
Sbjct: 3 ILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTTALPMLHSGNFD-----------FLVT 51
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
D+ MPGMTG DLLR ++ LK +PV+++++E +I + G + +KP
Sbjct: 52 DWNMPGMTGIDLLRAVRADERLKHLPVLMVTAEAKRDQIIEAAQAGVNGYVVKP 105
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 24/191 (12%)
Query: 3 MVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
V S+ +L D + + RLL SYQVT S + + L N +
Sbjct: 22 FVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVL---------NCEAG 72
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
++++I+ + +P + +L+ I + L+ IP+++MS+ + S + +CL GA E+ +K
Sbjct: 73 EIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVK 132
Query: 123 PVQLADVNKLKPHLMK-----GISKE----------IKEPNNINNKRKGLEEIDSADRTR 167
P+++ ++ L H+ + G+S++ + EP++ N L D+ D+ +
Sbjct: 133 PLRMNELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPK 192
Query: 168 TRLNDTIDINN 178
+N +N
Sbjct: 193 ENINQETSTSN 203
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 60.1 bits (144), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 2 GMVTDSQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQV 61
G + S+ +L D+ + LL SYQVTAV S + ++ L N++
Sbjct: 12 GFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDAL---------NAEG 62
Query: 62 IQVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFL 121
+++I+ + +P G +LR I L+ IPV++MS ++ + +CL+ GA ++ +
Sbjct: 63 PDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLV 122
Query: 122 KPVQLADVNKLKPHLMK 138
KP++ ++ L H+ +
Sbjct: 123 KPLRTNELLNLWTHMWR 139
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 12/143 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S VL VDD ++ER+L+T Y+VT N+A L LL +++ ++
Sbjct: 35 SGLRVLVVDDDPTCLMILERMLRTCLYEVTKC---NRAEMALSLLRKNKHG------FDI 85
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
+I+D MP M G+ LL + D+PV++MS+++ S + + + GA ++ +KPV++
Sbjct: 86 VISDVHMPDMDGFKLLEHVGLEM---DLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRM 142
Query: 127 ADVNKLKPHLMKGISKEIKEPNN 149
+ + H+++ E P +
Sbjct: 143 EALKNIWQHVVRKRRSEWSVPEH 165
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 16/126 (12%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQ---VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+V+ VDD+ + + R+L+ S Y+ V AVD KAL L +Q ++L
Sbjct: 17 NVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTL---------KNQRDNIDL 67
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
IITDY MPGM G L ++I + ++ V++MSS+ P++ L GA F KP+
Sbjct: 68 IITDYYMPGMNGLQLKKQITQ--EFGNLSVLVMSSD--PNKEEESLSCGAMGFIPKPIAP 123
Query: 127 ADVNKL 132
D+ K+
Sbjct: 124 TDLPKI 129
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
+ VL VDD ++ER+L T Y+VT N+A L LL +++ ++
Sbjct: 26 ANLRVLVVDDDPTCLMILERMLMTCLYRVTKC---NRAESALSLLRKNKNG------FDI 76
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
+I+D MP M G+ LL + D+PV++MS+++ S + + + GA ++ +KPV++
Sbjct: 77 VISDVHMPDMDGFKLLEHVGLEM---DLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRI 133
Query: 127 ADVNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTR 169
+ + H+++ E N++ G E DR R +
Sbjct: 134 EALKNIWQHVVRKKRNEW----NVSEHSGGSIEDTGGDRDRQQ 172
>sp|P71403|CHEY_HELPY Chemotaxis protein CheY homolog OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=cheY PE=1 SV=2
Length = 124
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+L VDDS R++I+ L Y+ V + G +A E L D +++V+
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKL-----DANADTKVL----- 50
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
ITD+ MP M G DL++K++ + K+IP++++++E + + L+ G + +KP
Sbjct: 51 ITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 16/136 (11%)
Query: 7 SQF----HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVI 62
SQF +VL VD + +++++K +YQV+ KAL FL S
Sbjct: 28 SQFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFL---------TSCKH 78
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
++N++I D+ MPG+ G L+ +K S D+PVVIMS +N + + GA ++ +K
Sbjct: 79 EINIVIWDFHMPGIDG---LQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVK 135
Query: 123 PVQLADVNKLKPHLMK 138
PV+ + + H+++
Sbjct: 136 PVKEEVMANIWQHIVR 151
>sp|Q9ZM64|CHEY_HELPJ Chemotaxis protein CheY homolog OS=Helicobacter pylori (strain J99)
GN=cheY PE=3 SV=1
Length = 124
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 11/116 (9%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+L VDDS R++I+ L Y+ V + G +A E L D +++V+
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKL-----DANADTKVL----- 50
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
ITD+ MP M G DL++K++ K+IP++++++E + + L+ G + +KP
Sbjct: 51 ITDWNMPEMNGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 24 IERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCMPGMTGYDLLR 83
++ L+ SYQVT +SG +A+ FL + N+ E ++L+I D+ MP + G D L
Sbjct: 54 LKNLMTQYSYQVTKYESGEEAMAFL-MKNKHE--------IDLVIWDFHMPDINGLDALN 104
Query: 84 KIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLKPHLMK 138
I + D+PVVIMS E + ++ GA +F +KPV + L H+ +
Sbjct: 105 IIGKQM---DLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYR 156
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 11/132 (8%)
Query: 7 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNL 66
S +L VDD ++E++L YQVT + AL L E+ +S +L
Sbjct: 9 SGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTIL-----RERKDS----FDL 59
Query: 67 IITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQL 126
+++D MPGM GY+LL+++ D+PV++MS + + + + GA ++ +KP++
Sbjct: 60 VLSDVHMPGMNGYNLLQQV--GLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRP 117
Query: 127 ADVNKLKPHLMK 138
++ + H+++
Sbjct: 118 EELKNIWQHVVR 129
>sp|Q1XDE4|YCF29_PORYE Probable transcriptional regulator ycf29 OS=Porphyra yezoensis
GN=ycf29 PE=3 SV=1
Length = 222
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLII 68
+ ++ V++ I+ K I+ L + V ++G +AL N D LII
Sbjct: 3 YKLMLVENDIVLSKAIQEYLIDQGFNVYIANNGLEALNLAYQYNFD-----------LII 51
Query: 69 TDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLAD 128
+D MP + GY+LL K+K++ +L IPV+ ++++ + + + G + KP D
Sbjct: 52 SDIMMPLVNGYELLAKLKKNKALSKIPVIFLTAKGMTKDRIKGYDMGCYGYLSKPF---D 108
Query: 129 VNKLKPHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTIDINNDGLPDLEI 186
N+L + I++++ + ++ N ++++ R R +D+ DGL + EI
Sbjct: 109 PNELLSIINNLIARDVLKEASLQNSATSNQQLNHKIRLTPREKSILDLVVDGLTNKEI 166
>sp|Q54SK5|DHKM_DICDI Hybrid signal transduction histidine kinase M OS=Dictyostelium
discoideum GN=dhkM PE=3 SV=1
Length = 2388
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L V+D++++ K+ +L+ +++V +G A+E + +Q++S +LI+ D
Sbjct: 2263 ILLVEDNLVNAKIAMTVLRKHNFRVELSKNGQLAMERI------KQSHSSF---DLILMD 2313
Query: 71 YCMP---GMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLA 127
MP G+T L RK + LK +P++ ++++ N CLE G EF KP+ A
Sbjct: 2314 IHMPVMDGITCSKLTRKFETEHGLKHLPIIALTADATTGHKNLCLEAGCNEFMSKPLDYA 2373
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL +DD ++E LL SY+VT + +A+ F+ N Q+ V+L+I+D
Sbjct: 13 VLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFI-------LDNPQI--VDLVISD 63
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
P G L ++E S IP VIM+S + + + + GA +F LKPV++ +++
Sbjct: 64 AFFPTEDG---LLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELS 120
Query: 131 KLKPHLMKGISKEIKEPNNINNKRK 155
+ H+ + ++ K N + N K
Sbjct: 121 NIWQHIFRKQMQDHKNNNMVGNLEK 145
>sp|P37599|CHEV_BACSU Chemotaxis protein CheV OS=Bacillus subtilis (strain 168) GN=cheV
PE=1 SV=1
Length = 303
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 72/122 (59%), Gaps = 4/122 (3%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
++ V+DS + +L++ LK + Y + + ++G +A E++ L E+E S+ Q+++IIT
Sbjct: 177 LIIVEDSPLLMRLLQDELKEAGYNNIASFENGKEAYEYIMNLAENETDLSK--QIDMIIT 234
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
D MP M G+ L + +KE+ D+PV+I SS +R GA+E KP +++D+
Sbjct: 235 DIEMPKMDGHRLTKLLKENPKSSDVPVMIFSSLITDDLRHRGEVVGADEQISKP-EISDL 293
Query: 130 NK 131
K
Sbjct: 294 IK 295
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
VL +DD ++E LL SY+VT + +A+ F+ N Q+ V+L+I+D
Sbjct: 13 VLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFI-------LDNPQI--VDLVISD 63
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVN 130
P G L ++E S IP VIM+S + + + + GA +F LKPV++ +++
Sbjct: 64 AFFPTEDG---LLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELS 120
Query: 131 KLKPHLMKGISKEIKEPNNINNKRK 155
+ H+ + ++ K N + N K
Sbjct: 121 NIWQHIFRKQMQDHKNNNMVGNLEK 145
>sp|Q04848|NTRC_AZOC5 Nitrogen assimilation regulatory protein NtrC OS=Azorhizobium
caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
GN=ntrC PE=3 SV=2
Length = 480
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 11 VLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITD 70
+L DD R ++ + L + Y+V + GN A + + D +L+ITD
Sbjct: 6 ILVADDDAAIRTVLNQALSRAGYEVRSC--GNAATLWRWVSQGDG---------DLVITD 54
Query: 71 YCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADV 129
MP +DLL +IK++ D+PV++MS++N R E GA E+ KP L ++
Sbjct: 55 VVMPDENAFDLLPRIKKARP--DLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKEL 111
>sp|Q9KT84|LUXO_VIBCH Regulatory protein LuxO OS=Vibrio cholerae serotype O1 (strain ATCC
39315 / El Tor Inaba N16961) GN=luxO PE=1 SV=1
Length = 455
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 14 VDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIITDYCM 73
V+D+ L L + V +G A+E +G D LI+ D +
Sbjct: 2 VEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPD-----------LILLDLRL 50
Query: 74 PGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPVQLADVNKLK 133
P MTG D+L +KE + D+P+V M++ + GA++F +KP + ++L+
Sbjct: 51 PDMTGMDVLYAVKEKSP--DVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCE---ADRLR 105
Query: 134 PHLMKGISKEIKEPNNINNKRKGLEEIDSADRTRTRLNDTID 175
+ I K K N+++NK + + + +T + TID
Sbjct: 106 VTVNNAIRKASKLKNDVDNKNQNYQGFIGSSQTMQAVYRTID 147
>sp|A1W0A5|CHEY_CAMJJ Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:23/36 (strain 81-176) GN=cheY PE=3
SV=1
Length = 130
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+L VDDS R++I+ L + V + G +A + L NED V ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLL-TKNED---------VKVL 50
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
ITD+ MP M G +L++K++ +D+P++++++E + + L+ G + +KP
Sbjct: 51 ITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>sp|P0C635|CHEY_CAMJE Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:2 (strain NCTC 11168) GN=cheY PE=3
SV=1
Length = 130
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+L VDDS R++I+ L + V + G +A + L NED V ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLL-TKNED---------VKVL 50
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
ITD+ MP M G +L++K++ +D+P++++++E + + L+ G + +KP
Sbjct: 51 ITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>sp|A8FMH1|CHEY_CAMJ8 Chemotaxis protein CheY homolog OS=Campylobacter jejuni subsp.
jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=cheY
PE=3 SV=1
Length = 130
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 9 FHVLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+L VDDS R++I+ L + V + G +A + L NED V ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLL-TKNED---------VKVL 50
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKP 123
ITD+ MP M G +L++K++ +D+P++++++E + + L+ G + +KP
Sbjct: 51 ITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKP 106
>sp|P18769|FRZE_MYXXA Gliding motility regulatory protein OS=Myxococcus xanthus GN=frzE
PE=1 SV=1
Length = 777
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLI 67
+ VL VDDS I R L+K + V G E+ Q +LI
Sbjct: 658 RLRVLLVDDSPIARATEGALVKALGHSVEEAQDG-----------EEAYVKVQNNTYDLI 706
Query: 68 ITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+TD MP + G+ L R++K + ++ IPV+I+SS P R L+ GA+ + +K
Sbjct: 707 LTDVQMPKLDGFSLARRLKSTPAVARIPVIILSSLASPEDKRRGLDAGADAYLVK 761
>sp|Q9FAD7|CHEY_ENTCL Chemotaxis protein CheY OS=Enterobacter cloacae GN=cheY PE=3 SV=3
Length = 129
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 4 VTDSQFHVLAVDDSIIDRKLIERLLKTSSYQ-VTAVDSGNKALEFLGLLNEDEQTNSQVI 62
+ D + L VDD R+++ LLK + V + G AL L Q
Sbjct: 1 MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL-----------QAG 49
Query: 63 QVNLIITDYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLK 122
+I+D+ MP M G +LL+ I+ A + +PV+++++E I + GA + +K
Sbjct: 50 GFGFVISDWNMPNMDGLELLKTIRADAGMASMPVLMVTAEAKKENIIAAAQAGASGYVVK 109
Query: 123 PVQLA 127
P A
Sbjct: 110 PFTAA 114
>sp|Q9A5I5|PLED_CAUCR Response regulator PleD OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=pleD PE=1 SV=1
Length = 454
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 10 HVLAVDDSIIDRKLIERLLKTSSYQVTAVDSGNKALEFLGLLNEDEQTNSQVIQVNLIIT 69
+L VDD + +L+E L Y+V+ G AL D +I+
Sbjct: 4 RILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPD-----------IILL 52
Query: 70 DYCMPGMTGYDLLRKIKESASLKDIPVVIMSSENIPSRINRCLEEGAEEFFLKPV 124
D MPGM G+ + RK+K+ + + IPVV++++ + + LE GA +F KP+
Sbjct: 53 DVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPI 107
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,743,846
Number of Sequences: 539616
Number of extensions: 2520510
Number of successful extensions: 8156
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 398
Number of HSP's that attempted gapping in prelim test: 7784
Number of HSP's gapped (non-prelim): 537
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)